ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20i07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475985.1| Oryza sativa (japonica cultivar-group), predic... 90 1e-14
2gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome... 90 1e-14
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
4dbj|AK120811.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 1e-14
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
6dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
7emb|AL663012.3|OSJN00217 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
9emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
10ref|XM_751164.1| Ustilago maydis 521 hypothetical protein (UM001... 42 2.4
11gb|AC113309.7| Mus musculus chromosome 6, clone RP23-440D19, com... 42 2.4
12emb|AL118559.6|CNS01DRU Human chromosome 14 DNA sequence BAC R-6... 42 2.4
13gb|AF071772.1|AF071772 Mus musculus beta2/neuroD gene, promoter ... 42 2.4
14emb|AL928696.6| Mouse DNA sequence from clone RP23-387G11 on chr... 42 2.4
15ref|XM_466437.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.4
16ref|XM_466438.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.4
17gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 9.4
18gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 9.4
19gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 9.4
20gb|AC110376.4| Mus musculus chromosome 12 clone RP23-441E7, comp... 40 9.4
21gb|AC140051.10| Mus musculus chromosome 12, clone RP23-296J15, c... 40 9.4
22emb|BX677675.9| Zebrafish DNA sequence from clone DKEYP-90G12 in... 40 9.4
23gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, co... 40 9.4
24gb|CP000001.1| Bacillus cereus E33L, complete genome 40 9.4
25emb|AL358791.24| Human DNA sequence from clone RP11-42B19 on chr... 40 9.4
26emb|AL138899.23| Human DNA sequence from clone RP11-404O13 on ch... 40 9.4
27emb|X62333.1|LLCLPL L.lactis plasmid clp-L gene for ATPase 40 9.4
28emb|AL935262.1| Lactobacillus plantarum strain WCFS1 complete ge... 40 9.4
29emb|AL596129.27| Mouse DNA sequence from clone RP23-294E23 on ch... 40 9.4
30gb|AC115069.6| Mus musculus chromosome 7, clone RP24-405B11, com... 40 9.4
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
32ref|XM_230592.3| PREDICTED: Rattus norvegicus zinc finger CCCH t... 40 9.4
33dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
34emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in ... 40 9.4
35dbj|AP003062.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.4
36dbj|AK105378.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.4
37dbj|AK063583.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.4
38emb|AL162311.5|CNS01RHR Human chromosome 14 DNA sequence BAC R-3... 40 9.4
39gb|AC111084.12| Mus musculus chromosome 7, clone RP23-143J24, co... 40 9.4
40gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 9.4
41emb|AL844545.7| Mouse DNA sequence from clone RP23-383C3 on chro... 40 9.4
42gb|AC151905.4| Mus musculus BAC clone RP23-205J22 from chromosom... 40 9.4 
>ref|XM_475985.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1668

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                        
Query: 410  gggcttggacaacatgtacatatgaatcagctaccatgcctgacagtttggtggacattg 469
            |||||| ||||||||| |||||||||||||| |||||||| || ||||| || |||||||
Sbjct: 1258 gggcttcgacaacatgaacatatgaatcagcaaccatgcccgatagtttagttgacattg 1199

                                 
Query: 470  aagatagagatgcactgtcca 490
            ||||||| |||||| ||||||
Sbjct: 1198 aagatagcgatgcaatgtcca 1178



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 519  cctcttctagtttgttgagccggagaagcgcttcagacc 557
            |||| |||||||||||||| |||||||| ||||||||||
Sbjct: 1147 cctcctctagtttgttgagacggagaagtgcttcagacc 1109
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>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05,
             complete sequence
          Length = 108479

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                         
Query: 410   gggcttggacaacatgtacatatgaatcagctaccatgcctgacagtttggtggacattg 469
             |||||| ||||||||| |||||||||||||| |||||||| || ||||| || |||||||
Sbjct: 49665 gggcttcgacaacatgaacatatgaatcagcaaccatgcccgatagtttagttgacattg 49724

                                  
Query: 470   aagatagagatgcactgtcca 490
             ||||||| |||||| ||||||
Sbjct: 49725 aagatagcgatgcaatgtcca 49745



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 519   cctcttctagtttgttgagccggagaagcgcttcagacc 557
             |||| |||||||||||||| |||||||| ||||||||||
Sbjct: 49776 cctcctctagtttgttgagacggagaagtgcttcagacc 49814
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                            
Query: 410      gggcttggacaacatgtacatatgaatcagctaccatgcctgacagtttggtggacattg 469
                |||||| ||||||||| |||||||||||||| |||||||| || ||||| || |||||||
Sbjct: 29039610 gggcttcgacaacatgaacatatgaatcagcaaccatgcccgatagtttagttgacattg 29039669

                                     
Query: 470      aagatagagatgcactgtcca 490
                ||||||| |||||| ||||||
Sbjct: 29039670 aagatagcgatgcaatgtcca 29039690



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 519      cctcttctagtttgttgagccggagaagcgcttcagacc 557
                |||| |||||||||||||| |||||||| ||||||||||
Sbjct: 29039721 cctcctctagtttgttgagacggagaagtgcttcagacc 29039759
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>dbj|AK120811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014G11, full
            insert sequence
          Length = 3234

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                        
Query: 410  gggcttggacaacatgtacatatgaatcagctaccatgcctgacagtttggtggacattg 469
            |||||| ||||||||| |||||||||||||| |||||||| || ||||| || |||||||
Sbjct: 1549 gggcttcgacaacatgaacatatgaatcagcaaccatgcccgatagtttagttgacattg 1490

                                 
Query: 470  aagatagagatgcactgtcca 490
            ||||||| |||||| ||||||
Sbjct: 1489 aagatagcgatgcaatgtcca 1469



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 519  cctcttctagtttgttgagccggagaagcgcttcagacc 557
            |||| |||||||||||||| |||||||| ||||||||||
Sbjct: 1438 cctcctctagtttgttgagacggagaagtgcttcagacc 1400
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                 
Query: 427     acatatgaatcagctaccatgcctgacagtttggtggacattgaagatag 476
               |||||||||||||||| ||||||||| ||| | || ||||||||||||||
Sbjct: 8128506 acatatgaatcagctatcatgcctgatagtgtagttgacattgaagatag 8128555
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>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1047A05
          Length = 157517

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 427   acatatgaatcagctaccatgcctgacagtttggtggacattgaagatag 476
             |||||||||||||||| ||||||||| ||| | || ||||||||||||||
Sbjct: 96817 acatatgaatcagctatcatgcctgatagtgtagttgacattgaagatag 96866
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>emb|AL663012.3|OSJN00217 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0069N01,
             complete sequence
          Length = 180264

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 427   acatatgaatcagctaccatgcctgacagtttggtggacattgaagatag 476
             |||||||||| ||||||||||||||| | | | || ||||||||||||||
Sbjct: 10553 acatatgaattagctaccatgcctgatactatagttgacattgaagatag 10504
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 427      acatatgaatcagctaccatgcctgacagtttggtggacattgaagatag 476
                |||||||||| ||||||||||||||| | | | || ||||||||||||||
Sbjct: 10760080 acatatgaattagctaccatgcctgatactatagttgacattgaagatag 10760031
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>emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0013A04,
              complete sequence
          Length = 188209

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 427    acatatgaatcagctaccatgcctgacagtttggtggacattgaagatag 476
              |||||||||| ||||||||||||||| | | | || ||||||||||||||
Sbjct: 159307 acatatgaattagctaccatgcctgatactatagttgacattgaagatag 159258
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>ref|XM_751164.1| Ustilago maydis 521 hypothetical protein (UM00110.1) partial mRNA
          Length = 2436

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 gaccaatgccagcagctcttg 376
           |||||||||||||||||||||
Sbjct: 588 gaccaatgccagcagctcttg 568
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>gb|AC113309.7| Mus musculus chromosome 6, clone RP23-440D19, complete sequence
          Length = 229553

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 469    gaagatagagatgcactgtcc 489
              |||||||||||||||||||||
Sbjct: 157546 gaagatagagatgcactgtcc 157566
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>emb|AL118559.6|CNS01DRU Human chromosome 14 DNA sequence BAC R-618B21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 206722

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 244    acacaccatctctgtccactc 264
              |||||||||||||||||||||
Sbjct: 107040 acacaccatctctgtccactc 107060
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>gb|AF071772.1|AF071772 Mus musculus beta2/neuroD gene, promoter and exon 1
          Length = 2172

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 577 tgagagcagagcaagcaagga 597
           |||||||||||||||||||||
Sbjct: 369 tgagagcagagcaagcaagga 349
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>emb|AL928696.6| Mouse DNA sequence from clone RP23-387G11 on chromosome 2, complete
            sequence
          Length = 102448

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 577  tgagagcagagcaagcaagga 597
            |||||||||||||||||||||
Sbjct: 7328 tgagagcagagcaagcaagga 7348
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>ref|XM_466437.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 696

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 555 acctcatggcaaggagcaga 574
           ||||||||||||||||||||
Sbjct: 184 acctcatggcaaggagcaga 203
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>ref|XM_466438.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 655

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 555 acctcatggcaaggagcaga 574
           ||||||||||||||||||||
Sbjct: 185 acctcatggcaaggagcaga 204
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 589    aagcaaggaagaagacgacg 608
              ||||||||||||||||||||
Sbjct: 610956 aagcaaggaagaagacgacg 610975
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 589    aagcaaggaagaagacgacg 608
              ||||||||||||||||||||
Sbjct: 621035 aagcaaggaagaagacgacg 621054
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 589    aagcaaggaagaagacgacg 608
              ||||||||||||||||||||
Sbjct: 621078 aagcaaggaagaagacgacg 621097
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>gb|AC110376.4| Mus musculus chromosome 12 clone RP23-441E7, complete sequence
          Length = 190516

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     tctaccagtttcacacatct 75
              ||||||||||||||||||||
Sbjct: 130463 tctaccagtttcacacatct 130444
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>gb|AC140051.10| Mus musculus chromosome 12, clone RP23-296J15, complete sequence
          Length = 205123

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    tctaccagtttcacacatct 75
             ||||||||||||||||||||
Sbjct: 12883 tctaccagtttcacacatct 12864
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>emb|BX677675.9| Zebrafish DNA sequence from clone DKEYP-90G12 in linkage group 2,
             complete sequence
          Length = 124301

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   tgacctctgctgatctctga 299
             ||||||||||||||||||||
Sbjct: 68134 tgacctctgctgatctctga 68115
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>gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, complete sequence
          Length = 200841

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 562   ggcaaggagcagagatgaga 581
             ||||||||||||||||||||
Sbjct: 97236 ggcaaggagcagagatgaga 97217
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 589    aagcaaggaagaagacgacg 608
              ||||||||||||||||||||
Sbjct: 608378 aagcaaggaagaagacgacg 608397
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>emb|AL358791.24| Human DNA sequence from clone RP11-42B19 on chromosome 10 Contains the
             3' end of a novel gene, complete sequence
          Length = 197389

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   acatatgaatcacctcttct 526
             ||||||||||||||||||||
Sbjct: 35057 acatatgaatcacctcttct 35038
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>emb|AL138899.23| Human DNA sequence from clone RP11-404O13 on chromosome 1 Contains two
             novel genes, a elongation factor RNA polymerase II 2
             (ELL2) pseudogene, the CD1D gene for CD1D antigen, d
             polypeptide and a ribosomal protein S10 (RPS10)
             pseudogene, complete sequence
          Length = 134137

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   gtttagttaaacaaaaatgt 136
             ||||||||||||||||||||
Sbjct: 52598 gtttagttaaacaaaaatgt 52579
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>emb|X62333.1|LLCLPL L.lactis plasmid clp-L gene for ATPase
          Length = 2577

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 caaaagagaaatcaatttca 211
           ||||||||||||||||||||
Sbjct: 172 caaaagagaaatcaatttca 153
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>emb|AL935262.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 11/11
          Length = 304274

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    caaaagagaaatcaatttca 211
              ||||||||||||||||||||
Sbjct: 197657 caaaagagaaatcaatttca 197676
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>emb|AL596129.27| Mouse DNA sequence from clone RP23-294E23 on chromosome 11 Contains the
             3' end of the Myh3 gene for embryonic skeletal muscle
             myosin heavy polypeptide 3, four novel genes
             (2310065F04Rik), the Myh2 gene for adult skeletal muscle
             myosin heavy polypeptide 2, the Myh1 gene for adult
             skeletal muscle myosin heavy polypeptide 1, the Myh4 gene
             for skeletal muscle  myosin heavy polypeptide 4 and the
             Myh8 gene for perinatal skeletal muscle myosin heavy
             polypeptide 8 (4832426G23Rik), complete sequence
          Length = 221384

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 60    ccagtttcacacatcttacatcta 83
             |||||||| |||||||||||||||
Sbjct: 39030 ccagtttcccacatcttacatcta 39007
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>gb|AC115069.6| Mus musculus chromosome 7, clone RP24-405B11, complete sequence
          Length = 168442

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    caccatctctgtccactcca 266
              ||||||||||||||||||||
Sbjct: 160583 caccatctctgtccactcca 160564
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 314      gcagcgtcaacatcgactcgagtgagcagttc 345
                |||||||||||||||||||  | |||||||||
Sbjct: 21901820 gcagcgtcaacatcgactccggcgagcagttc 21901851
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>ref|XM_230592.3| PREDICTED: Rattus norvegicus zinc finger CCCH type domain containing
            6 (predicted) (Zc3hdc6_predicted), mRNA
          Length = 4822

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 588  caagcaaggaagaagacgac 607
            ||||||||||||||||||||
Sbjct: 2428 caagcaaggaagaagacgac 2447
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>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0006A22
          Length = 190690

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 314    gcagcgtcaacatcgactcgagtgagcagttc 345
              |||||||||||||||||||  | |||||||||
Sbjct: 124305 gcagcgtcaacatcgactccggcgagcagttc 124336
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>emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in linkage group 19, complete
              sequence
          Length = 200523

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    agttaaacaaaaatgtacac 140
              ||||||||||||||||||||
Sbjct: 166873 agttaaacaaaaatgtacac 166854
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>dbj|AP003062.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-555G19, complete
              sequence
          Length = 171428

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    cccgtacatatgaatcacct 521
              ||||||||||||||||||||
Sbjct: 136698 cccgtacatatgaatcacct 136679
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>dbj|AK105378.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-F02, full
           insert sequence
          Length = 655

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 555 acctcatggcaaggagcaga 574
           ||||||||||||||||||||
Sbjct: 185 acctcatggcaaggagcaga 204
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>dbj|AK063583.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-H12, full
           insert sequence
          Length = 696

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 555 acctcatggcaaggagcaga 574
           ||||||||||||||||||||
Sbjct: 184 acctcatggcaaggagcaga 203
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>emb|AL162311.5|CNS01RHR Human chromosome 14 DNA sequence BAC R-317N8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167127

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   ttgatgtctaaggctcttgg 165
             ||||||||||||||||||||
Sbjct: 14687 ttgatgtctaaggctcttgg 14668
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>gb|AC111084.12| Mus musculus chromosome 7, clone RP23-143J24, complete sequence
          Length = 205564

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    caccatctctgtccactcca 266
              ||||||||||||||||||||
Sbjct: 152802 caccatctctgtccactcca 152821
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 589    aagcaaggaagaagacgacg 608
              ||||||||||||||||||||
Sbjct: 621035 aagcaaggaagaagacgacg 621054
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>emb|AL844545.7| Mouse DNA sequence from clone RP23-383C3 on chromosome 2, complete
             sequence
          Length = 120913

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   acaacatgtacatatgaatc 437
             ||||||||||||||||||||
Sbjct: 93017 acaacatgtacatatgaatc 92998
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>gb|AC151905.4| Mus musculus BAC clone RP23-205J22 from chromosome 8, complete sequence
          Length = 214760

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 562    ggcaaggagcagagatgaga 581
              ||||||||||||||||||||
Sbjct: 179985 ggcaaggagcagagatgaga 180004


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,599,431
Number of Sequences: 3902068
Number of extensions: 5599431
Number of successful extensions: 106588
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106272
Number of HSP's gapped (non-prelim): 316
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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