>dbj|AK071748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110K01, full
           insert sequence
          Length = 686

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                       
Query: 103 ccgcancangatccacaagcanggaggnaactctgatcgtttgatcggaggtcagatagt 162
           ||||| || |||||||||||| ||||  || |||||||||| ||||||| ||||||||||
Sbjct: 441 ccgcagcaggatccacaagcagggagagaattctgatcgttagatcggatgtcagatagt 382

                      
Query: 163 gtgcgaggacc 173
           |||||||||||
Sbjct: 381 gtgcgaggacc 371

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                         
Query: 132     actctgatcgtttgatcggaggtcagatagtgtgcgaggacc 173
               |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 8642945 actctgatcgttagatcggatgtcagatagtgtgcgaggacc 8642904

>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
              complete sequence
          Length = 137327

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                        
Query: 132    actctgatcgtttgatcggaggtcagatagtgtgcgaggacc 173
              |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 123917 actctgatcgttagatcggatgtcagatagtgtgcgaggacc 123876

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                         
Query: 132     actctgatcgtttgatcggaggtcagatagtgtgcgaggacc 173
               |||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 8640780 actctgatcgttagatcggatgtcagatagtgtgcgaggacc 8640739

>ref|NM_187528.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 354

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                    
Query: 133 ctctgatcgtttgatcggaggtcagatagtgtgcgaggacc 173
           ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 290 ctctgatcgttagatcggatgtcagatagtgtgcgaggacc 250

>gb|AY107423.1| Zea mays PCO135938 mRNA sequence
          Length = 361

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 103 ccgcancangatccacaagcanggaggnaactctgatcgtttgatcggaggtcagatagt 162
           ||||| || |||||||||||| ||||  |||| || || || ||| ||| ||||||||| 
Sbjct: 89  ccgcagcaggatccacaagcagggagagaactgtggtcattggattggatgtcagataga 30

                      
Query: 163 gtgcgaggacc 173
           |||||||||||
Sbjct: 29  gtgcgaggacc 19

>gb|AY107196.1| Zea mays PCO076336 mRNA sequence
          Length = 811

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 112 gatccacaagcanggaggnaactctgatcgtttgatcggaggtcagatagtgtgcgagga 171
           |||||||||||| ||||  |||| || || || ||| ||| ||||||||| |||||||||
Sbjct: 528 gatccacaagcagggagagaactgtggtcattggattggatgtcagatagagtgcgagga 469

             
Query: 172 cc 173
           ||
Sbjct: 468 cc 467

>gb|AY587061.1| Sus scrofa ataxia-telangiectasia mutated protein gene, exons 1 through
             64 and complete cds
          Length = 153745

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    aaactgaaataggggagttc 56
             ||||||||||||||||||||
Sbjct: 77799 aaactgaaataggggagttc 77780

>gb|AC146233.2| Pan troglodytes BAC clone RP43-32B21 from 7, complete sequence
          Length = 160147

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    tttgctctgctgaaactgaa 44
             ||||||||||||||||||||
Sbjct: 40741 tttgctctgctgaaactgaa 40760

>gb|AC004541.1| Homo sapiens PAC clone RP5-1167P13 from 7, complete sequence
          Length = 88987

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    tttgctctgctgaaactgaa 44
             ||||||||||||||||||||
Sbjct: 85079 tttgctctgctgaaactgaa 85098

>gb|AC154706.2| Mus musculus BAC clone RP23-132D23 from chromosome 14, complete sequence
          Length = 215330

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     tttttgctctgctgaaactg 42
              ||||||||||||||||||||
Sbjct: 144145 tttttgctctgctgaaactg 144126

>gb|AC090116.15| Homo sapiens 12q BAC RP11-578B16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162004

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    tctgctgaaactgaaatag 48
             |||||||||||||||||||
Sbjct: 20398 tctgctgaaactgaaatag 20416

>gb|AC025538.6| Homo sapiens BAC clone RP11-274J2 from 4, complete sequence
          Length = 161478

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 47     aggggagttcatgtggttcttcc 69
              ||||||| |||||||||||||||
Sbjct: 156524 aggggaggtcatgtggttcttcc 156502

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 49      gggagttcatgtggttctt 67
               |||||||||||||||||||
Sbjct: 8836763 gggagttcatgtggttctt 8836745

>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1001_B06
          Length = 134810

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 49     gggagttcatgtggttctt 67
              |||||||||||||||||||
Sbjct: 107084 gggagttcatgtggttctt 107066

>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0528B02
          Length = 144495

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 49   gggagttcatgtggttctt 67
            |||||||||||||||||||
Sbjct: 2392 gggagttcatgtggttctt 2374

>dbj|AK105495.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C06, full
           insert sequence
          Length = 1564

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 49  gggagttcatgtggttctt 67
           |||||||||||||||||||
Sbjct: 491 gggagttcatgtggttctt 473


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 802,207
Number of Sequences: 3902068
Number of extensions: 802207
Number of successful extensions: 47588
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47514
Number of HSP's gapped (non-prelim): 74
length of query: 187
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 165
effective length of database: 17,147,199,772
effective search space: 2829287962380
effective search space used: 2829287962380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)