ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20h18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC183269.3| Pan troglodytes BAC clone CH251-685E7 from chromo... 44 0.40
2gb|AC092902.10| Homo sapiens 3 BAC RP11-379B18 (Roswell Park Can... 44 0.40
3emb|AL359922.10| Human DNA sequence from clone RP11-70L8 on chro... 44 0.40
4emb|AL138850.12| Human DNA sequence from clone RP11-104O6 on chr... 44 0.40
5gb|AC130888.2| Homo sapiens 3 BAC RP11-77P16 (Roswell Park Cance... 44 0.40
6gb|AC034259.7| Homo sapiens chromosome 11, clone RP11-138N3, com... 44 0.40
7gb|AC092865.10| Homo sapiens 12 BAC RP11-113C12 (Roswell Park Ca... 44 0.40
8gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cance... 44 0.40
9gb|AC112916.3| Homo sapiens X BAC RP11-765I9 (Roswell Park Cance... 44 0.40
10gb|AC034203.7| Homo sapiens chromosome 3 clone CTB-182H21, compl... 44 0.40
11gb|AC004924.2| Homo sapiens PAC clone RP5-903G2 from 11, complet... 44 0.40
12gb|AC133041.3| Homo sapiens 3 BAC CTD-2026G6 (Cal Tech Human BAC... 44 0.40
13emb|CT476800.3| RP43-013D05, complete sequence 44 0.40
14emb|AL359398.2|CNS05TE1 Human chromosome 14 DNA sequence BAC R-3... 44 0.40
15emb|AL139354.6|CNS01DXK Human chromosome 14 DNA sequence BAC R-9... 44 0.40
16dbj|AP003716.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 44 0.40
17dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds 44 0.40
18dbj|AP003498.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.40
19gb|AC002432.1| Homo sapiens BAC clone CTA-317G18 from 7, complet... 42 1.6
20emb|AL096829.17|HSJ595K12 Human DNA sequence from clone RP4-595K... 42 1.6
21gb|AY751740.1| Campylobacter jejuni strain T1016 FlaA (flaA) gen... 40 6.2
22gb|AC158966.5| Mus musculus chromosome 1, clone RP23-382I8, comp... 40 6.2
23gb|AC099628.7| Mus musculus chromosome 1, clone RP24-82L18, comp... 40 6.2
24gb|AC146191.2| Pan troglodytes BAC clone RP43-25E3 from 7, compl... 40 6.2
25gb|AC119985.6| Mus musculus chromosome 5, clone RP24-502C10, com... 40 6.2
26gb|AC165316.4| Mus musculus chromosome 5, clone RP23-168G13, com... 40 6.2
27ref|NM_001030982.1| Gallus gallus Rap guanine nucleotide exchang... 40 6.2
28gb|AC009508.3| Homo sapiens BAC clone RP11-564N1 from 7, complet... 40 6.2
29gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete se... 40 6.2
30gb|AC136954.14| Medicago truncatula clone mth2-7i1, complete seq... 40 6.2
31emb|AL731532.8| Human DNA sequence from clone RP11-113E21 on chr... 40 6.2
32emb|AL591073.10| Human DNA sequence from clone RP11-142O19 on ch... 40 6.2
33emb|AL591046.4| Human DNA sequence from clone RP11-96O10 on chro... 40 6.2
34emb|AL356053.14| Human DNA sequence from clone RP11-453G10 on ch... 40 6.2
35emb|AL354835.8| Human DNA sequence from clone RP11-164B1 on chro... 40 6.2
36emb|AL162379.14| Human DNA sequence from clone RP11-426K7 on chr... 40 6.2
37emb|AL136531.16| Human DNA sequence from clone RP11-314N13 on ch... 40 6.2
38emb|Y11762.1|CSFALAAB Campylobacter sp. flaA and flaB genes 40 6.2
39emb|AL593845.5| Zebrafish DNA sequence from clone BUSM1-142B24 i... 40 6.2
40emb|AJ851807.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.2
41gb|AC112914.2| Homo sapiens 12p BAC RP11-136D7 (Roswell Park Can... 40 6.2
42emb|BX465838.15| Zebrafish DNA sequence from clone DKEY-11J8 in ... 40 6.2
43gb|AC007119.6| Arabidopsis thaliana chromosome 2 clone F2G1 map ... 40 6.2
44gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map ... 40 6.2
45dbj|AB041962.1| TT virus DNA, complete genome, isolate:TGP96 40 6.2
46gb|AC087694.3| Homo sapiens chromosome 8, clone RP11-55M17, comp... 40 6.2
47gb|AC093808.2| Homo sapiens BAC clone RP11-342A1 from 4, complet... 40 6.2
48gb|AC103923.2| Homo sapiens chromosome 1 clone RP11-230B22, comp... 40 6.2
49gb|AC008912.5| Homo sapiens chromosome 5 clone CITB-H1_2269J5, c... 40 6.2
50gb|AF050194.1|AF050194 Campylobacter jejuni strain L19 flagellin... 40 6.2
51dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 40 6.2
52emb|AL355540.12| Human DNA sequence from clone RP5-1104A8 on chr... 40 6.2
53gb|AC007102.4|AC007102 Homo sapiens chromosome 4 clone C0162P16 ... 40 6.2
54emb|AL158801.4|CNS01RGN Human chromosome 14 DNA sequence BAC R-6... 40 6.2
55gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 40 6.2
56gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park C... 40 6.2
57gb|AC087587.14| Homo sapiens 12 BAC CTC-465D4 (CalTech Human BAC... 40 6.2 
>gb|AC183269.3| Pan troglodytes BAC clone CH251-685E7 from chromosome 3, complete
              sequence
          Length = 220398

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    tgcaattcctatcaatatacca 164
              ||||||||||||||||||||||
Sbjct: 200484 tgcaattcctatcaatatacca 200463
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>gb|AC092902.10| Homo sapiens 3 BAC RP11-379B18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 124071

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 143   tgcaattcctatcaatatacca 164
             ||||||||||||||||||||||
Sbjct: 42293 tgcaattcctatcaatatacca 42314
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>emb|AL359922.10| Human DNA sequence from clone RP11-70L8 on chromosome 9 Contains a
              pseudogene similar to part of beta tubulin, the MTAP gene
              for methylthioadenosine phosphorylase (MSAP), a novel gene
              and a CpG island, complete sequence
          Length = 168656

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    tgcaattcctatcaatatacca 164
              ||||||||||||||||||||||
Sbjct: 144401 tgcaattcctatcaatatacca 144380
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>emb|AL138850.12| Human DNA sequence from clone RP11-104O6 on chromosome 20 Contains STSs
             and GSSs, complete sequence
          Length = 57784

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 12    cagaaagttacaagagaaaagc 33
             ||||||||||||||||||||||
Sbjct: 12759 cagaaagttacaagagaaaagc 12738
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>gb|AC130888.2| Homo sapiens 3 BAC RP11-77P16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 114687

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    tgcaattcctatcaatatacca 164
              ||||||||||||||||||||||
Sbjct: 104454 tgcaattcctatcaatatacca 104433
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>gb|AC034259.7| Homo sapiens chromosome 11, clone RP11-138N3, complete sequence
          Length = 206192

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 143    tgcaattcctatcaatatacca 164
              ||||||||||||||||||||||
Sbjct: 165531 tgcaattcctatcaatatacca 165552
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>gb|AC092865.10| Homo sapiens 12 BAC RP11-113C12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 117296

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 143    tgcaattcctatcaatatacca 164
              ||||||||||||||||||||||
Sbjct: 117066 tgcaattcctatcaatatacca 117087
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>gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152599

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    tgcaattcctatcaatatacca 164
              ||||||||||||||||||||||
Sbjct: 150826 tgcaattcctatcaatatacca 150805
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>gb|AC112916.3| Homo sapiens X BAC RP11-765I9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172457

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    tgcaattcctatcaatatacca 164
              ||||||||||||||||||||||
Sbjct: 115717 tgcaattcctatcaatatacca 115696
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>gb|AC034203.7| Homo sapiens chromosome 3 clone CTB-182H21, complete sequence
          Length = 105702

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 143   tgcaattcctatcaatatacca 164
             ||||||||||||||||||||||
Sbjct: 83423 tgcaattcctatcaatatacca 83402
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>gb|AC004924.2| Homo sapiens PAC clone RP5-903G2 from 11, complete sequence
          Length = 92171

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 143   tgcaattcctatcaatatacca 164
             ||||||||||||||||||||||
Sbjct: 16047 tgcaattcctatcaatatacca 16068
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>gb|AC133041.3| Homo sapiens 3 BAC CTD-2026G6 (Cal Tech Human BAC Library D) complete
             sequence
          Length = 59699

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 143   tgcaattcctatcaatatacca 164
             ||||||||||||||||||||||
Sbjct: 26869 tgcaattcctatcaatatacca 26848
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>emb|CT476800.3| RP43-013D05, complete sequence
          Length = 207013

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    tgcaattcctatcaatatacca 164
              ||||||||||||||||||||||
Sbjct: 175280 tgcaattcctatcaatatacca 175259
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>emb|AL359398.2|CNS05TE1 Human chromosome 14 DNA sequence BAC R-369C8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176399

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 145   caattcctatcaatataccagt 166
             ||||||||||||||||||||||
Sbjct: 64187 caattcctatcaatataccagt 64166
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>emb|AL139354.6|CNS01DXK Human chromosome 14 DNA sequence BAC R-945F5 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 201539

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 145    caattcctatcaatataccagt 166
              ||||||||||||||||||||||
Sbjct: 193264 caattcctatcaatataccagt 193243
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>dbj|AP003716.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-119D9, complete
              sequence
          Length = 165187

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    tgcaattcctatcaatatacca 164
              ||||||||||||||||||||||
Sbjct: 162034 tgcaattcctatcaatatacca 162013
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>dbj|AB060808.1| Homo sapiens gene for p16/CDKN2A, complete cds
          Length = 250000

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    tgcaattcctatcaatatacca 164
              ||||||||||||||||||||||
Sbjct: 104401 tgcaattcctatcaatatacca 104380
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>dbj|AP003498.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-167J8, complete
             sequence
          Length = 120199

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 143   tgcaattcctatcaatatacca 164
             ||||||||||||||||||||||
Sbjct: 23860 tgcaattcctatcaatatacca 23881
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>gb|AC002432.1| Homo sapiens BAC clone CTA-317G18 from 7, complete sequence
          Length = 143427

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 142   gtgcaattcctatcaatataccagt 166
             ||||||||||||||||||| |||||
Sbjct: 32562 gtgcaattcctatcaatatcccagt 32586
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>emb|AL096829.17|HSJ595K12 Human DNA sequence from clone RP4-595K12 on chromosome 1p31.2-31.3
              Contains the 5' end of a novel gene (MGC34032) and a
              ribosomal protein L29 (RPL29) pseudogene, complete sequence
          Length = 135983

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 428    aatattatctaacatttactt 448
              |||||||||||||||||||||
Sbjct: 115136 aatattatctaacatttactt 115116
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>gb|AY751740.1| Campylobacter jejuni strain T1016 FlaA (flaA) gene, partial cds
          Length = 1595

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 437  taacatttacttgagttaca 456
            ||||||||||||||||||||
Sbjct: 1488 taacatttacttgagttaca 1469
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>gb|AC158966.5| Mus musculus chromosome 1, clone RP23-382I8, complete sequence
          Length = 183519

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   catgaagtcccattaattgt 397
             ||||||||||||||||||||
Sbjct: 20811 catgaagtcccattaattgt 20830
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>gb|AC099628.7| Mus musculus chromosome 1, clone RP24-82L18, complete sequence
          Length = 171875

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   catgaagtcccattaattgt 397
             ||||||||||||||||||||
Sbjct: 19680 catgaagtcccattaattgt 19661
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>gb|AC146191.2| Pan troglodytes BAC clone RP43-25E3 from 7, complete sequence
          Length = 185364

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   tgcaattcctatcaatataccagt 166
             ||||||||||||||| ||||||||
Sbjct: 36257 tgcaattcctatcaaaataccagt 36280
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>gb|AC119985.6| Mus musculus chromosome 5, clone RP24-502C10, complete sequence
          Length = 134739

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    acagaaagttacaagagaaa 30
             ||||||||||||||||||||
Sbjct: 10323 acagaaagttacaagagaaa 10342
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>gb|AC165316.4| Mus musculus chromosome 5, clone RP23-168G13, complete sequence
          Length = 205237

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    acagaaagttacaagagaaa 30
             ||||||||||||||||||||
Sbjct: 42871 acagaaagttacaagagaaa 42852
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>ref|NM_001030982.1| Gallus gallus Rap guanine nucleotide exchange factor (GEF) 5
            (RAPGEF5), mRNA
          Length = 2398

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 348  gtatcaatcgtcttttgtctacattgatggca 379
            ||||||||||||||||||| ||| || |||||
Sbjct: 1165 gtatcaatcgtcttttgtcgacactggtggca 1134
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>gb|AC009508.3| Homo sapiens BAC clone RP11-564N1 from 7, complete sequence
          Length = 119414

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   tgcaattcctatcaatataccagt 166
             ||||||||||||||| ||||||||
Sbjct: 88128 tgcaattcctatcaaaataccagt 88151
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>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence
          Length = 124554

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   tctgaatcaagcaaaacatt 256
             ||||||||||||||||||||
Sbjct: 29231 tctgaatcaagcaaaacatt 29212
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>gb|AC136954.14| Medicago truncatula clone mth2-7i1, complete sequence
          Length = 113505

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    tctgaatcaagcaaaacatt 256
              ||||||||||||||||||||
Sbjct: 111809 tctgaatcaagcaaaacatt 111790
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>emb|AL731532.8| Human DNA sequence from clone RP11-113E21 on chromosome 10 Contains
            the 3'end of a novel gene, complete sequence
          Length = 100443

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 8    tgtacagaaagttacaagagaaaagcaa 35
            ||||| ||||||| ||||||||||||||
Sbjct: 8325 tgtactgaaagttgcaagagaaaagcaa 8352
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>emb|AL591073.10| Human DNA sequence from clone RP11-142O19 on chromosome 6, complete
             sequence
          Length = 167974

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 143   tgcaattcctatcaatataccagttgca 170
             ||||||||||||||| |||||| |||||
Sbjct: 91691 tgcaattcctatcaaaataccaattgca 91718
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>emb|AL591046.4| Human DNA sequence from clone RP11-96O10 on chromosome 6, complete
              sequence
          Length = 194466

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 143    tgcaattcctatcaatataccagttgca 170
              ||||||||||||||| |||||| |||||
Sbjct: 174477 tgcaattcctatcaaaataccaattgca 174450
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>emb|AL356053.14| Human DNA sequence from clone RP11-453G10 on chromosome 10 Contains
             part of a novel gene (FLJ13031) (FLJ40349), complete
             sequence
          Length = 176355

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 145   caattcctatcaatataccagttgcacacttt 176
             ||||||||||||| |||||| | |||||||||
Sbjct: 30333 caattcctatcaaaataccaatggcacacttt 30302
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>emb|AL354835.8| Human DNA sequence from clone RP11-164B1 on chromosome 13q31.1-32.3,
              complete sequence
          Length = 159620

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    tgcaattcctatcaatatac 162
              ||||||||||||||||||||
Sbjct: 132354 tgcaattcctatcaatatac 132373
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>emb|AL162379.14| Human DNA sequence from clone RP11-426K7 on chromosome 13 Contains part
             of a novel gene, complete sequence
          Length = 109757

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   ttgcaaatatttctgcaaac 223
             ||||||||||||||||||||
Sbjct: 96366 ttgcaaatatttctgcaaac 96347
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>emb|AL136531.16| Human DNA sequence from clone RP11-314N13 on chromosome 20 Contains the
             SNPH gene for syntaphilin, the 3' end of the RAD21L1 gene
             for RAD21-like 1 (S. pombe), the SDCBP2 gene for syndecan
             binding protein (syntenin) 2, a novel gene, the 5' end of
             a novel gene, the 3' end of the FKBP1A gene for FK506
             binding protein 1A (12kDa) and three CpG islands, complete
             sequence
          Length = 119072

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 143   tgcaattcctatcaatataccagt 166
             ||||||||||||||| ||||||||
Sbjct: 91493 tgcaattcctatcaaaataccagt 91470
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>emb|Y11762.1|CSFALAAB Campylobacter sp. flaA and flaB genes
          Length = 4057

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 437  taacatttacttgagttaca 456
            ||||||||||||||||||||
Sbjct: 1735 taacatttacttgagttaca 1716
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>emb|AL593845.5| Zebrafish DNA sequence from clone BUSM1-142B24 in linkage group 17
             Contains a novel gene for a protein similar to human
             FLJ11186, a novel gene similar to human KIAA1316 and fly
             CG2747, a novel gene for a protein with a HECT-domain
             (ubiquitin-transferase) and a CpG island, complete
             sequence
          Length = 89159

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   attatctaacatttacttga 450
             ||||||||||||||||||||
Sbjct: 43304 attatctaacatttacttga 43323
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>emb|AJ851807.1| Gallus gallus mRNA for hypothetical protein, clone 35j20
          Length = 2398

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 348  gtatcaatcgtcttttgtctacattgatggca 379
            ||||||||||||||||||| ||| || |||||
Sbjct: 1165 gtatcaatcgtcttttgtcgacactggtggca 1134
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>gb|AC112914.2| Homo sapiens 12p BAC RP11-136D7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 131408

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 143    tgcaattcctatcaatataccagt 166
              ||||||||||||||| ||||||||
Sbjct: 129753 tgcaattcctatcaaaataccagt 129730
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>emb|BX465838.15| Zebrafish DNA sequence from clone DKEY-11J8 in linkage group 17, complete
              sequence
          Length = 229940

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 431    attatctaacatttacttga 450
              ||||||||||||||||||||
Sbjct: 216697 attatctaacatttacttga 216678
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>gb|AC007119.6| Arabidopsis thaliana chromosome 2 clone F2G1 map mi238, complete
            sequence
          Length = 54433

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 237  tctgaatcaagcaaaacatt 256
            ||||||||||||||||||||
Sbjct: 6010 tctgaatcaagcaaaacatt 5991
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>gb|AC007019.5| Arabidopsis thaliana chromosome 2 clone F7D8 map mi238, complete
           sequence
          Length = 107848

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 237 tctgaatcaagcaaaacatt 256
           ||||||||||||||||||||
Sbjct: 901 tctgaatcaagcaaaacatt 920
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>dbj|AB041962.1| TT virus DNA, complete genome, isolate:TGP96
          Length = 2908

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 196  tgctgcagttgcaaatattt 215
            ||||||||||||||||||||
Sbjct: 1196 tgctgcagttgcaaatattt 1177
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>gb|AC087694.3| Homo sapiens chromosome 8, clone RP11-55M17, complete sequence
          Length = 152818

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    tacagaaagttacaagagaa 29
             ||||||||||||||||||||
Sbjct: 71107 tacagaaagttacaagagaa 71088
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>gb|AC093808.2| Homo sapiens BAC clone RP11-342A1 from 4, complete sequence
          Length = 210837

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   aatattatctaacatttact 447
             ||||||||||||||||||||
Sbjct: 59533 aatattatctaacatttact 59514
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>gb|AC103923.2| Homo sapiens chromosome 1 clone RP11-230B22, complete sequence
          Length = 185624

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 443    ttacttgagttacatcttca 462
              ||||||||||||||||||||
Sbjct: 119193 ttacttgagttacatcttca 119174
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>gb|AC008912.5| Homo sapiens chromosome 5 clone CITB-H1_2269J5, complete sequence
          Length = 115378

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 143   tgcaattcctatcaatataccagt 166
             ||||||||||||||| ||||||||
Sbjct: 55487 tgcaattcctatcaaaataccagt 55464
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>gb|AF050194.1|AF050194 Campylobacter jejuni strain L19 flagellin A (flaA) gene, complete cds
          Length = 1728

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 437  taacatttacttgagttaca 456
            ||||||||||||||||||||
Sbjct: 1582 taacatttacttgagttaca 1563
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>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 435     tctaacatttacttgagttacatc 458
               |||||| |||||||||||||||||
Sbjct: 1334532 tctaacctttacttgagttacatc 1334555
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>emb|AL355540.12| Human DNA sequence from clone RP5-1104A8 on chromosome 1. Contains part
             of a novel gene, ESTs, STSs and GSSs, complete sequence
          Length = 120219

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 145   caattcctatcaatataccagttgcacacttt 176
             ||||||||||||| |||||| | |||||||||
Sbjct: 40392 caattcctatcaaaataccaatggcacacttt 40423
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>gb|AC007102.4|AC007102 Homo sapiens chromosome 4 clone C0162P16 map 4p16, complete sequence
          Length = 176258

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 143   tgcaattcctatcaatataccagttgca 170
             ||||||||||||||| |||||| |||||
Sbjct: 36401 tgcaattcctatcaaaataccaattgca 36428
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>emb|AL158801.4|CNS01RGN Human chromosome 14 DNA sequence BAC R-665C16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 205860

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   gtcttttgtctacattgatg 376
             ||||||||||||||||||||
Sbjct: 39934 gtcttttgtctacattgatg 39915
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    atcaagcaaaacattctcaa 261
              ||||||||||||||||||||
Sbjct: 381940 atcaagcaaaacattctcaa 381921
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>gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 171887

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 143  tgcaattcctatcaatataccagt 166
            ||||||||||||||| ||||||||
Sbjct: 4159 tgcaattcctatcaaaataccagt 4182
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>gb|AC087587.14| Homo sapiens 12 BAC CTC-465D4 (CalTech Human BAC Library C) complete
             sequence
          Length = 198842

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 143   tgcaattcctatcaatataccagt 166
             ||||||||||||||| ||||||||
Sbjct: 85364 tgcaattcctatcaaaataccagt 85341


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,131,294
Number of Sequences: 3902068
Number of extensions: 4131294
Number of successful extensions: 75260
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75143
Number of HSP's gapped (non-prelim): 117
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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