>MTG8_MOUSE (Q61909) Protein CBFA2T1 (MTG8 protein)|
          Length = 577

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 31/118 (26%), Positives = 50/118 (42%)
 Frame = -1

Query: 362 PPGSRSPAPRENSRSPMKADSPNNMSPAANGRSPSPRDGEDNGNHRXXXXXXXXXXX*VD 183
           PP +   APR +S +P    +  + SP A   +PSP +G  NG                +
Sbjct: 31  PPPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNGFSNG------PSSSSSSSLAN 84

Query: 182 QILPVFTQWECITW*ESRVDQILPTVTKLSKILNKDLPVRV*FYRVLYFGI*YSSQTI 9
           Q LP      C     S++ + L T+ +    ++ ++  RV   R L  G+  S+ TI
Sbjct: 85  QQLPP----ACGARQLSKLKRFLTTLQQFGNDISPEIGERV---RTLVLGLVNSTLTI 135

>MTG8_HUMAN (Q06455) Protein CBFA2T1 (Protein MTG8) (Protein ETO) (Eigth twenty|
           one protein) (Cyclin D-related protein) (Zinc finger
           MYND domain-containing protein 2)
          Length = 604

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 31/118 (26%), Positives = 50/118 (42%)
 Frame = -1

Query: 362 PPGSRSPAPRENSRSPMKADSPNNMSPAANGRSPSPRDGEDNGNHRXXXXXXXXXXX*VD 183
           PP +   APR +S +P    +  + SP A   +PSP +G  NG                +
Sbjct: 58  PPPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNGFSNG------PSSSSSSSLAN 111

Query: 182 QILPVFTQWECITW*ESRVDQILPTVTKLSKILNKDLPVRV*FYRVLYFGI*YSSQTI 9
           Q LP      C     S++ + L T+ +    ++ ++  RV   R L  G+  S+ TI
Sbjct: 112 QQLPP----ACGARQLSKLKRFLTTLQQFGNDISPEIGERV---RTLVLGLVNSTLTI 162

>ELOA2_HUMAN (Q8IYF1) RNA polymerase II transcription factor SIII subunit A2|
           (Elongin A2) (EloA2) (Transcription elongation factor B
           polypeptide 3B)
          Length = 753

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 365 TPPGSRSPAPRENSRSPMKADSPNNMSPAANGR 267
           TPPG + P PR +SR P        ++PA +GR
Sbjct: 135 TPPGQQRPHPRSHSREPRAERKCPRIAPADSGR 167

>CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity factor 6|
          Length = 545

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 362 PPGSRSPAPRENSRSPMKADSPNNMSPAANGRSPSPRD 249
           PPG   PAP  N   P     P N  P+++GR P P D
Sbjct: 343 PPGGPPPAPHVN---PAFFPPPGNNMPSSDGRGPPPGD 377

>ELOA3_HUMAN (Q8NG57) RNA polymerase II transcription factor SIII subunit A3|
           (Elongin A3) (EloA3) (Transcription elongation factor B
           polypeptide 3C)
          Length = 546

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -1

Query: 365 TPPGSRSPAPRENSRSPMKADSPNNMSPAANGRSPSP 255
           TPPG + P PR  SR P        M+PA +G    P
Sbjct: 135 TPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDP 171

>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22|
          Length = 1010

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = -1

Query: 353 SRSPAPRENSRSPMKAD---SPNNMSPAANGRSPSP 255
           +RSP+PR  S SP   D   SP   +P+   R PSP
Sbjct: 17  TRSPSPRTQSPSPRDEDGSRSPGERTPSPPSRDPSP 52



 Score = 30.4 bits (67), Expect = 3.9
 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = -1

Query: 359 PGSRSPAPREN--SRSPMKADSPNNMSPAAN-GRSPSPR 252
           P SRSP PR    SR  +++ SP   SPA    RS SPR
Sbjct: 81  PRSRSPTPRSQSPSRRSVRSPSPRQGSPARRVDRSSSPR 119



 Score = 29.6 bits (65), Expect = 6.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 359 PGSRSPAPRENSRSPMKADSPNNMSPAANGRSPSPRDGEDNGNHR 225
           P +RSP PR +SR           SP   G+ P PR  +  G++R
Sbjct: 118 PRARSPPPRRHSR-----------SPPLRGQPPPPRHRDAGGDYR 151



 Score = 29.6 bits (65), Expect = 6.7
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 359 PGSRSPAPRENSRSPMKADSPNNMSPA-ANGRSPSPRD 249
           PG R+P+P     SP ++      SP+    RS SPRD
Sbjct: 38  PGERTPSPPSRDPSPYRSPGERTPSPSPRRDRSLSPRD 75

>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)|
          Length = 303

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = -1

Query: 353 SRSPAPRENSRSPMKADSPNNMSPAANGRSPSPR 252
           SRSP  + + RSP K+ S  +  P +  RSPSPR
Sbjct: 233 SRSPKAKSSRRSPAKSTS-RSPGPRSKSRSPSPR 265

>VGLG_HHV2H (P13290) Glycoprotein G|
          Length = 699

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = -1

Query: 365 TPPGSRSPAPRENSRSPMKADSPNNMSPAANGRSPS 258
           TPPG  +P P   S +P  ADSP   SP A    PS
Sbjct: 475 TPPGPATPGPVGASAAP-TADSPLTASPPATAPGPS 509

>TMSP8_RAT (P83748) Transmembrane serine protease 8 precursor (EC 3.4.21.-)|
           (Distal intestinal serine protease) (Transmembrane
           serine protease 1) (TMSP-1)
          Length = 304

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 203 VMHFHWVHDGCHCLRRPWGSGYDHLQLG 286
           ++H  WV    HC RRP  S + H+++G
Sbjct: 61  LIHEVWVLTAAHCFRRPLNSSFYHVKVG 88

>PTPR2_RAT (Q63475) Receptor-type tyrosine-protein phosphatase N2 precursor|
           (EC 3.1.3.48) (R-PTP-N2) (PTP NE-6) (PTPNE6) (Phogrin)
          Length = 1004

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 362 PPGSRSPAPRENSRSPMKADSPNNMSPAANGRSP-SPRDGEDN 237
           PPG   P PR    SPM+A  P   +PA + R P  P D +D+
Sbjct: 250 PPGENDPEPRYLVHSPMRAPRP-FAAPALSQRWPLPPGDSKDS 291

>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1|
           (RNA-binding protein srp-5) (CeSRp75)
          Length = 312

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = -1

Query: 350 RSPAPRENSRSPMKADSPNNMSPAANGRSPSPRDGEDNGN 231
           RSP+P   SRSP +  SP         RS SP D  D  N
Sbjct: 279 RSPSPPRGSRSPSEKGSPR------RSRSASPMDNGDGDN 312

>LCE2D_HUMAN (Q5TA82) Late cornified envelope protein 2D (Late envelope protein|
           12) (Small proline-rich-like epidermal differentiation
           complex protein 1A)
          Length = 110

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +2

Query: 302 CQPSSDSCCSPLVQGFCCQEGWG 370
           C PSS SCC P   G CC  G G
Sbjct: 48  CGPSSGSCCGP-SSGGCCSSGGG 69

>IF2_LEPIC (Q72NX3) Translation initiation factor IF-2|
          Length = 891

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 362 PPGSRSPAPRENSRSPMKADSPNNMSPAANGRSPSPRD 249
           PP    P P ++ +SP+   +P++ SPA    SP  +D
Sbjct: 73  PPVMPLPLPGDSGQSPIVRPAPSSHSPAKREESPGKQD 110

>CBP1_CAEEL (P34545) Protein cbp-1|
          Length = 2056

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 362 PPGSRSPAPRENSRSPMKAD-SPNNMSPAANGRSPSPRDG 246
           PPG ++      +RSPM  + +PN MSP + GR P P  G
Sbjct: 121 PPGQQNAF----NRSPMMPNGTPNMMSPPSMGRVPGPSPG 156

>NFH_RAT (P16884) Neurofilament triplet H protein (200 kDa neurofilament|
           protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1072

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = -1

Query: 365 TPPGSRSPAPREN---SRSPMKADSPNNMSPAANGRSPS 258
           +P G++SPA  ++   ++SP +A SP    P A  +SP+
Sbjct: 696 SPAGAKSPAEAKSPVVAKSPAEAKSPAEAKPPAEAKSPA 734

>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4|
           (RNA-binding protein srp-2) (CeSC35)
          Length = 196

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -1

Query: 350 RSPAPRENSRSPMKADSPNNMSPAANGRSPSPRDGEDNGNHR 225
           RS +PR  SRSP  + S +     +  RSP  RD  D+ + R
Sbjct: 115 RSRSPRRRSRSPRYSRSRSPRRSRSRTRSPPSRDRRDSPDRR 156

>LCE2C_HUMAN (Q5TA81) Late cornified envelope protein 2C (Late envelope protein|
           11)
          Length = 110

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +2

Query: 302 CQPSSDSCCSPLVQGFCCQEGWG 370
           C PSS SCC P   G CC  G G
Sbjct: 48  CGPSSGSCCGP-SSGGCCSSGAG 69

>IF2_LEPIN (Q8F7K1) Translation initiation factor IF-2|
          Length = 880

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 362 PPGSRSPAPRENSRSPMKADSPNNMSPAANGRSPSPRD 249
           PP    P P ++ +SP+   +P++ SPA    SP  +D
Sbjct: 73  PPVMPLPLPDDSGQSPIVRPAPSSHSPAKREESPGKQD 110

>MTCD_TETTH (Q8WSW3) Cadmium metallothionein precursor (MT-Cd) (Cd-MT)|
          Length = 162

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 299 GCQPSSDSCCSPLVQGFCC 355
           GC+ +S  CC P+ QG CC
Sbjct: 104 GCKCTSCQCCKPVQQGCCC 122

>PRB4S_HUMAN (P10163) Basic salivary proline-rich protein 4 allele S precursor|
           (Salivary proline-rich protein Po) (Parotid o protein)
           [Contains: Protein N1; Glycosylated protein A]
          Length = 247

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -3

Query: 387 QGEGPEPHPSWQQKPCTKGEQQESDEG*QP**HEPSCKWS*PEPQGRRRQWQP 229
           Q +GP PHP   ++P  +G  Q   +G  P    P  K   P PQG  +  +P
Sbjct: 88  QSQGPPPHPGKPERPPPQGGNQ--SQGTPP----PPGKPERPPPQGGNQSHRP 134

>SLBP_DROME (Q9VAN6) Histone RNA hairpin-binding protein (Histone|
           stem-loop-binding protein)
          Length = 276

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -1

Query: 353 SRSPAPRENSRSPMKADSPNNMSPAANGRSPSPRDGED 240
           S +P   ENSRS    +SPN+ + +ANG + +P+ G +
Sbjct: 118 SFTPPSNENSRS----NSPNSSNSSANGDAAAPKGGNN 151

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 15/37 (40%), Positives = 15/37 (40%)
 Frame = -1

Query: 362 PPGSRSPAPRENSRSPMKADSPNNMSPAANGRSPSPR 252
           PP    P P    RSP         SP    RSPSPR
Sbjct: 577 PPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPR 613

>RACD_STRTR (P29079) Aspartate racemase (EC 5.1.1.13)|
          Length = 243

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 153 VHHLVRVESRSNSSYSYKTLQNLEQRLACTSLILSCT 43
           ++H ++     N    Y+ L+   +RL C  +IL CT
Sbjct: 162 IYHEIKESDHLNQELYYEILEEAVERLNCEKVILGCT 198

>SSPA_STAAN (Q7A6A6) Glutamyl endopeptidase precursor (EC 3.4.21.19)|
           (Staphylococcal serine proteinase) (V8 protease) (V8
           proteinase) (Endoproteinase Glu-C)
          Length = 342

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 362 PPGSRSPAPRENSRSPMKADSPNNMSPAANGRSPSPRDGEDNGNH 228
           P    +P    N  +P   D+PNN     N  +P+  D  DNG++
Sbjct: 289 PNNPDNPDNPNNPDNPNNPDNPNNPDEPNNPDNPNNPDNPDNGDN 333

>SSPA_STAAM (Q99V45) Glutamyl endopeptidase precursor (EC 3.4.21.19)|
           (Staphylococcal serine proteinase) (V8 protease) (V8
           proteinase) (Endoproteinase Glu-C)
          Length = 342

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 362 PPGSRSPAPRENSRSPMKADSPNNMSPAANGRSPSPRDGEDNGNH 228
           P    +P    N  +P   D+PNN     N  +P+  D  DNG++
Sbjct: 289 PNNPDNPDNPNNPDNPNNPDNPNNPDEPNNPDNPNNPDNPDNGDN 333


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,579,541
Number of Sequences: 219361
Number of extensions: 1197429
Number of successful extensions: 5018
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4997
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)