>RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein)|
           (Fertility restorer) (Restorer for CMS)
          Length = 791

 Score =  117 bits (293), Expect = 2e-26
 Identities = 66/178 (37%), Positives = 93/178 (52%)
 Frame = -1

Query: 576 LLNXYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG 397
           L+  Y   G  ++   +F  M +QG+NP+  +Y  VI  LC  GR+ D + YF+Q+ D G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436

Query: 396 LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXX 217
           L P  I YN LIHGL    + E A  L  +M  +GI  N   +NS+I             
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496

Query: 216 KMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 43
           K++E ++  G KPNV TYN LI GY ++G  + A      M+  G +PN+ TY  L N
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554



 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 45/162 (27%), Positives = 87/162 (53%)
 Frame = -1

Query: 543 EKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLL 364
           +K  E+  +MV+ G+ PD  +Y  ++   C+ G+  + + + K++   G+EPD++TY+LL
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 363 IHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXXKMYEELLAKGW 184
           +  L K+GR  EA  +++ M K+G+ P + TY +L+              + + ++  G 
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367

Query: 183 KPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 58
            P+ + ++ LI  Y+  G  + A   + +M   G  PN+ TY
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTY 409



 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 45/169 (26%), Positives = 86/169 (50%)
 Frame = -1

Query: 576 LLNXYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG 397
           ++N +   GD++K    +  M+++G+ PD+ +Y  +I  LC    ++  +     +   G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 396 LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXX 217
           + PD +TYN ++HG   SG+ +EA+     M   G+ P++ TY+ L+ YL          
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321

Query: 216 KMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPN 70
           K+++ +  +G KP + TY  L++GY+  G+          M+  G  P+
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370



 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
 Frame = -1

Query: 516 MVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM---GLEPDLITYNLLIHGLGK 346
           M E G  P++ SY +++  LC + R  + L     + D    G  PD+++Y  +I+G  K
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 345 SGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXXKMYEELLAKGWKPNVFT 166
            G  ++A S Y++M  +GI P++ TYNS+I  L          ++   ++  G  P+  T
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268

Query: 165 YNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 49
           YN+++ GY  SG P+ A     +M   G  P+  TY  L
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307



 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 50/176 (28%), Positives = 85/176 (48%)
 Frame = -1

Query: 576 LLNXYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG 397
           +L+ Y  +G  ++     + M   G+ PD+ +Y++++D LC +GR  +    F  +T  G
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331

Query: 396 LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXX 217
           L+P++ TY  L+ G    G L E   L + M + GI P+ Y ++ LI             
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391

Query: 216 KMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 49
            ++ ++  +G  PN  TY A+I     SG  E+A   + +MI  G  P +  Y  L
Sbjct: 392 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447



 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 41/158 (25%), Positives = 86/158 (54%)
 Frame = -1

Query: 531 ELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGL 352
           +LFE MV  G+ P++ +Y  +I+  C  G++++ +     +  +GL+P+ +TY+ LI+G 
Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 556

Query: 351 GKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXXKMYEELLAKGWKPNV 172
            K  R+E+AL L+ +ME  G++P++ TYN ++  L          ++Y  +   G +  +
Sbjct: 557 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616

Query: 171 FTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 58
            TYN ++ G   +   ++A   +  + +   +  + T+
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654



 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 50/181 (27%), Positives = 85/181 (46%)
 Frame = -1

Query: 576  LLNXYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG 397
            L+N Y +AG  ++  +L   MV  G+ P+  +Y+ +I+  C   R+ D L  FK++   G
Sbjct: 517  LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576

Query: 396  LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXX 217
            + PD+ITYN+++ GL ++ R   A  LY  + + G    L TYN ++  L          
Sbjct: 577  VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636

Query: 216  KMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQM 37
            +M++ L     K    T+N +I      G  + A   +      G  PN  TY  +   +
Sbjct: 637  QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696

Query: 36   L 34
            +
Sbjct: 697  I 697

>Y4791_ARATH (P0C043) Hypothetical PPR-repeat protein At4g17915|
          Length = 463

 Score = 79.0 bits (193), Expect = 9e-15
 Identities = 44/174 (25%), Positives = 89/174 (51%)
 Frame = -1

Query: 564 YRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 385
           +++    E    L++ +   G+NP   +Y V++D LC  G +++ L  FK++     +P+
Sbjct: 129 FKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKPE 187

Query: 384 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXXKMYE 205
           L+TYN+LI+GL KS R+  A  +  +++K G  PN  TY +++             +++ 
Sbjct: 188 LMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFL 247

Query: 204 ELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 43
           E+  +G+  + + Y A++     +G  + A+     ++  G R +  +Y  L N
Sbjct: 248 EMKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLN 301



 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
 Frame = -1

Query: 543 EKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLL 364
           EK   L    +  G++PD+ +Y  +I   C    + +  +  +++ D G+ PD+ TYN L
Sbjct: 30  EKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSL 89

Query: 363 IHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLI-LYLXXXXXXXXXXKMYEELLAKG 187
           I G  +   L+  L L+++M + GI P+L++YN+L+  Y            +Y++L   G
Sbjct: 90  IAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAG 149

Query: 186 WKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 43
             P   TYN L+      G  +NA   +  M     +P   TY  L N
Sbjct: 150 LNPGPDTYNVLLDALCKCGYIDNALELFKEM-QSRFKPELMTYNILIN 196



 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
 Frame = -1

Query: 474 VVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKK 295
           + +D+LC   +L    S       +G++PD++TYN LI G  +   +EEA ++   M   
Sbjct: 18  ICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDA 77

Query: 294 GIAPNLYTYNSLILYLXXXXXXXXXXKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENA 115
           GI P++ TYNSLI              +++E+L  G  P++++YN L+  Y   G  E A
Sbjct: 78  GIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEA 137

Query: 114 F-AAYGRMIVGGCRPNSSTY 58
           F   Y  + + G  P   TY
Sbjct: 138 FRVLYKDLQLAGLNPGPDTY 157



 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 41/181 (22%), Positives = 84/181 (46%)
 Frame = -1

Query: 576 LLNXYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG 397
           LL+     G  +   ELF+ M +    P++ +Y ++I+ LC   R+        +L   G
Sbjct: 160 LLDALCKCGYIDNALELFKEM-QSRFKPELMTYNILINGLCKSRRVGTAKWMLTELKKSG 218

Query: 396 LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXX 217
             P+ +TY  ++    K+ R+   L L+ +M+++G   + Y Y +++  L          
Sbjct: 219 YTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEAY 278

Query: 216 KMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQM 37
           +  +EL+ KG + ++ +YN L+  Y   G+ +      G +   G + +  T+  + N +
Sbjct: 279 EYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGL 338

Query: 36  L 34
           L
Sbjct: 339 L 339



 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 44/161 (27%), Positives = 75/161 (46%)
 Frame = -1

Query: 576 LLNXYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG 397
           LLN Y   G+ + V +L   +  +GM  D  ++T++++ L   G+      +F  + +MG
Sbjct: 299 LLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMG 358

Query: 396 LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXX 217
           +  +L+T N L+ GL K+G ++ A+  +  ME K    + YTY S++  L          
Sbjct: 359 IGLNLVTCNCLVDGLCKAGHVDRAMRYFESMEVK----DEYTYTSVVHNLCKDMRFVCAS 414

Query: 216 KMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRM 94
           K+      KG K       A++ G  +SG    A  A   M
Sbjct: 415 KLLLSCYNKGIKIPTSARRAVLSGLRMSGCYGEARKAKAEM 455

>PTCD1_PONPY (Q5R655) Pentatricopeptide repeat protein 1|
          Length = 698

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
 Frame = -1

Query: 480 YTVVIDTLCADGRLNDGLSYFKQ--LTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND 307
           Y +    L  +G+L + L  F++  L +  L+P    Y  LI G G+ G L++A SLYN 
Sbjct: 137 YFLQCKRLIKEGKLVEALDLFERQMLKEERLQPMESNYTALIGGCGRVGYLKKAFSLYNQ 196

Query: 306 MEKKGIAPNLYTYNSLILYLXXX----XXXXXXXKMYEELLAKGWKPNVFTYNALIR 148
           M+K+ + P+  TY +L                  K+ ++L AK ++ N+ TY+AL++
Sbjct: 197 MKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLK 253



 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 6/142 (4%)
 Frame = -1

Query: 552 GDTEKVCELFESMV--EQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 379
           G   +  +LFE  +  E+ + P   +YT +I      G L    S + Q+    LEP   
Sbjct: 148 GKLVEALDLFERQMLKEERLQPMESNYTALIGGCGRVGYLKKAFSLYNQMKKRDLEPSDA 207

Query: 378 TY----NLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXXKM 211
           TY    N+      K   L+ AL L   ++ K    NL TY++L+              +
Sbjct: 208 TYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDV 267

Query: 210 YEELLAKGWKPNVFTYNALIRG 145
           ++E++ KG      T++ L+ G
Sbjct: 268 FKEIIHKGHVVTEETFSFLLMG 289



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 26/88 (29%), Positives = 44/88 (50%)
 Frame = -1

Query: 516 MVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGR 337
           M E    PDI++ T++ + + +       L     L +  +E DL  +N L+    K G 
Sbjct: 476 MAEHRQQPDIRTLTLLAEVVESGSPAESLL--LALLDEHQVEADLTFFNTLVRKKSKLGD 533

Query: 336 LEEALSLYNDMEKKGIAPNLYTYNSLIL 253
           LE A +L   + K+G+ PNL T+ +L +
Sbjct: 534 LEGAKALLPVLAKRGLVPNLQTFCNLAI 561



 Score = 33.5 bits (75), Expect = 0.45
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = -1

Query: 510 EQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLE 331
           E  +  D+  +  ++      G L    +    L   GL P+L T+  L  G     R +
Sbjct: 511 EHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCH---RPK 567

Query: 330 EALSLYNDMEKKGIAPNLYTYNSLI 256
           + L L  DM+K  + PN + Y++LI
Sbjct: 568 DGLQLLTDMKKSQVTPNSHIYSALI 592

>PTCD1_HUMAN (O75127) Pentatricopeptide repeat protein 1|
          Length = 700

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
 Frame = -1

Query: 459 LCADGRLNDGLSYFKQ--LTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIA 286
           L  +G+L + L  F++  L +  L+P    Y +LI G G+ G L++A +LYN M+K+ + 
Sbjct: 146 LIKEGKLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLE 205

Query: 285 PNLYTYNSLILYLXXX----XXXXXXXKMYEELLAKGWKPNVFTYNALIR 148
           P+  TY +L                  K+ ++L AK ++ N+ TY+AL++
Sbjct: 206 PSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLK 255



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
 Frame = -1

Query: 552 GDTEKVCELFESMV--EQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 379
           G   +  +LFE  +  E+ + P   +YTV+I      G L    + + Q+    LEP   
Sbjct: 150 GKLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDA 209

Query: 378 TY----NLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXXKM 211
           TY    N+      K   L+ AL L   ++ K    NL TY++L+              +
Sbjct: 210 TYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDV 269

Query: 210 YEELLAKGWKPNVFTYNALIRG 145
           ++E++ KG      T++ L+ G
Sbjct: 270 FKEIIHKGHVVTEETFSFLLMG 291



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 26/88 (29%), Positives = 44/88 (50%)
 Frame = -1

Query: 516 MVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGR 337
           M E    PDI++ T++ + + +       L     L +  +E DL  +N L+    K G 
Sbjct: 478 MAEHRQQPDIRTLTLLAEVVESGSPAESLL--LALLDEHQVEADLTFFNTLVRKKSKLGD 535

Query: 336 LEEALSLYNDMEKKGIAPNLYTYNSLIL 253
           LE A +L   + K+G+ PNL T+ +L +
Sbjct: 536 LEGAKALLPVLAKRGLVPNLQTFCNLAI 563



 Score = 33.9 bits (76), Expect = 0.34
 Identities = 23/85 (27%), Positives = 38/85 (44%)
 Frame = -1

Query: 510 EQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLE 331
           E  +  D+  +  ++      G L    +    L   GL P+L T+  L  G     R +
Sbjct: 513 EHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCH---RPK 569

Query: 330 EALSLYNDMEKKGIAPNLYTYNSLI 256
           + L L  DM+K  + PN + Y++LI
Sbjct: 570 DGLQLLTDMKKSQVTPNTHIYSALI 594

>PTCD1_MOUSE (Q8C2E4) Pentatricopeptide repeat protein 1|
          Length = 695

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
 Frame = -1

Query: 459 LCADGRLNDGLSYFKQ--LTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIA 286
           L  +G+L + L  F++  L +  L+P    Y +LI G G+ G L++A  L+NDM+K+ + 
Sbjct: 144 LIKEGKLAEALDLFERQMLKEERLQPLECNYTVLIGGCGRVGYLKKAFRLFNDMKKRDLE 203

Query: 285 PNLYTYNSLILYLXXX----XXXXXXXKMYEELLAKGWKPNVFTYNALIR 148
           P+  TY +L                  K+ ++L A+ ++ N+ TY+AL++
Sbjct: 204 PSDATYTALFNVCAESPWKDSALQSALKLRQQLQARNFQLNLKTYHALLK 253



 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 30/88 (34%), Positives = 44/88 (50%)
 Frame = -1

Query: 516 MVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGR 337
           M E G+ PDIK+ T++ + +         L     L    +E D+  +N LI    K G 
Sbjct: 476 MTEHGLQPDIKTLTLLAEVVEPGSAAESSL--LSVLDRHRVEADVTFFNTLIRKKSKLGD 533

Query: 336 LEEALSLYNDMEKKGIAPNLYTYNSLIL 253
           LE A +L   + KKGI PNL T+ +L +
Sbjct: 534 LEGAKALLPILAKKGIVPNLRTFCNLAI 561



 Score = 42.0 bits (97), Expect = 0.001
 Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 8/173 (4%)
 Frame = -1

Query: 552 GDTEKVCELFESMV--EQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 379
           G   +  +LFE  +  E+ + P   +YTV+I      G L      F  +    LEP   
Sbjct: 148 GKLAEALDLFERQMLKEERLQPLECNYTVLIGGCGRVGYLKKAFRLFNDMKKRDLEPSDA 207

Query: 378 TY----NLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXXKM 211
           TY    N+      K   L+ AL L   ++ +    NL TY++L+              +
Sbjct: 208 TYTALFNVCAESPWKDSALQSALKLRQQLQARNFQLNLKTYHALLKVAAKCADLRLCLDV 267

Query: 210 YEELLAKGWKPNVFTYNALIRG--YSVSGSPENAFAAYGRMIVGGCRPNSSTY 58
           ++E++ +G      T+  L+ G           A   + +M+  G +P+   Y
Sbjct: 268 FKEIIQRGHAVTEETFCFLLVGCIQDKKTGFRQAMQVWRQMLSLGIKPSRHGY 320



 Score = 33.1 bits (74), Expect = 0.58
 Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 4/170 (2%)
 Frame = -1

Query: 531 ELFESMVEQG-MNPDIKSYTVVI---DTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLL 364
           EL  S++  G ++P + S+  V    D L   G L     +  ++T+ GL+PD+ T  LL
Sbjct: 435 ELEVSLLSLGTLSPAVVSFGTVATPADRLALMGGLE---GFLGKMTEHGLQPDIKTLTLL 491

Query: 363 IHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXXKMYEELLAKGW 184
              +      E   SL + +++  +  ++  +N+LI              +   L  KG 
Sbjct: 492 AEVVEPGSAAES--SLLSVLDRHRVEADVTFFNTLIRKKSKLGDLEGAKALLPILAKKGI 549

Query: 183 KPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQML 34
            PN+ T+  L  G      P +       M      PN   Y  L N  L
Sbjct: 550 VPNLRTFCNLAIG---CHRPRDGMQLLADMKKSQVSPNIHIYSTLINAAL 596

>YLE1_SCHPO (Q10451) Hypothetical protein C1093.01 in chromosome I|
          Length = 1261

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
 Frame = -1

Query: 522  ESMVEQGMNPDIKSYTVVIDTLCADGRLNDG---LSYFKQLTDMGLEPDLITYNLLIHGL 352
            ++M   G  P   ++  +I+     G  +D    L+ F++     ++P +  YN ++  L
Sbjct: 877  DNMKMLGYIPRASTFAHLINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKL 936

Query: 351  GKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXXKMYEELLAK-GWKPN 175
            G++ R  E   L+ +M++ G+ P   TY ++I             K++ E+  +  ++P 
Sbjct: 937  GRARRTTECWKLFQEMKESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPR 996

Query: 174  VFTYNALIR-GYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 49
            V  YN +I+       + E A   Y R+      P+S TY  L
Sbjct: 997  VAPYNTMIQFEVQTMFNREKALFYYNRLCATDIEPSSHTYKLL 1039



 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 5/150 (3%)
 Frame = -1

Query: 576  LLNXYRIAGDTEKVC---ELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLT 406
            L+N     GDT+       +FE      + P +  Y  V+  L    R  +    F+++ 
Sbjct: 894  LINNSTRRGDTDDATTALNIFEETKRHNVKPSVFLYNAVLSKLGRARRTTECWKLFQEMK 953

Query: 405  DMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKK-GIAPNLYTYNSLILY-LXXXXX 232
            + GL P  +TY  +I+   + G    A  L+ +ME +    P +  YN++I + +     
Sbjct: 954  ESGLLPTSVTYGTVINAACRIGDESLAEKLFAEMENQPNYQPRVAPYNTMIQFEVQTMFN 1013

Query: 231  XXXXXKMYEELLAKGWKPNVFTYNALIRGY 142
                   Y  L A   +P+  TY  L+  Y
Sbjct: 1014 REKALFYYNRLCATDIEPSSHTYKLLMDAY 1043

>K0391_HUMAN (O15091) Protein KIAA0391|
          Length = 567

 Score = 36.6 bits (83), Expect = 0.053
 Identities = 27/73 (36%), Positives = 33/73 (45%)
 Frame = -1

Query: 375 YNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXXKMYEELL 196
           Y+LLI GL  S R  EAL L  D+ KK I P+   YN  I              +Y+ELL
Sbjct: 213 YSLLIRGLIHSDRWREALLLLEDI-KKVITPSKKNYNDCIQGALLHQDVNTAWNLYQELL 271

Query: 195 AKGWKPNVFTYNA 157
                P + T  A
Sbjct: 272 GHDIVPMLETLKA 284

>LPPRC_HUMAN (P42704) 130 kDa leucine-rich protein (LRP 130) (GP130)|
           (Leucine-rich PPR motif-containing protein)
          Length = 1273

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 31/123 (25%), Positives = 46/123 (37%)
 Frame = -1

Query: 411 LTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXX 232
           L  +G   D+  YN L+    ++            ME+  I PN  TY  LI        
Sbjct: 32  LQKLGAVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGD 91

Query: 231 XXXXXKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQ 52
                K+   +  K        ++AL+ G++ +G  ENA      M   G  P   TY+ 
Sbjct: 92  IEGASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLA 151

Query: 51  LPN 43
           L N
Sbjct: 152 LLN 154

>YG3M_YEAST (P48237) Hypothetical 101.4 kDa protein in RPL24B-RSR1 intergenic|
           region
          Length = 864

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
 Frame = -1

Query: 510 EQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLE--PDLITYNLLIHGLGKSGR 337
           + G+ P+ ++ T VI             + F  +  +  +  PD+ TYN ++    K   
Sbjct: 313 DYGITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTMLRICEKERN 372

Query: 336 LEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXX-XXXXXKMYEELLAKGWK 181
             +AL L+ +++   I P   TY  +   L              + L   GWK
Sbjct: 373 FPKALDLFQEIQDHNIKPTTNTYIMMARVLASSSSNAVVSEGKSDSLRLLGWK 425

>YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon Tn4556|
          Length = 395

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 32/84 (38%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
 Frame = -3

Query: 454 RRWAVE*WP-VLLQTAYRYGA*A*PHHL*LAHTRPR*IWKARGGTL-----PLQ*HGEER 293
           RR AV   P  L Q A RY     P H+  AH+        RG  L     PL       
Sbjct: 208 RRLAVHPVPGQLRQPARRY-----PRHINGAHSE-------RGDLLRPLQRPLHLRTRHP 255

Query: 292 NRPEPVHVQLTDPLPGQSREGRGS 221
           +RP P  VQL DPLPG+ R  + S
Sbjct: 256 HRPAPQPVQLRDPLPGRHRPAKES 279

>CBX2_HUMAN (Q14781) Chromobox protein homolog 2|
          Length = 532

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = -2

Query: 233 RPRKPAKCMKNCWRKAGSPMFSHTTPLSGGTASLAALKTHLRPTVG 96
           RP   AK +K   +  G+P      PLS   A LAALK H +   G
Sbjct: 178 RPVSLAKVLKTARKDLGAPASKLPPPLSAPVAGLAALKAHAKEACG 223

>AEP3_KLULA (Q6CIF3) ATPase expression protein 3|
          Length = 593

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -1

Query: 375 YNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLXXXXXXXXXXKMYEELL 196
           +N +I+  G          LY  M+ +GIAPN+ TYN ++  L            Y E +
Sbjct: 216 FNDVIYYYGNKNNFATCRELYAQMKSEGIAPNVQTYNLMLRNLLRNSRLIKQQLPYREAI 275

>POLB_MAIZE (P15718) Putative Pol polyprotein from transposon element Bs1 (ORF|
           1)
          Length = 740

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = -1

Query: 399 GLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL 253
           G+    + +NLL+  L   GR  +A  +  +M+  G  P+++TY   +L
Sbjct: 465 GVVMTAVAHNLLVQALFMDGRASDAYVVLEEMQNNGPFPDVFTYTLKVL 513



 Score = 31.6 bits (70), Expect = 1.7
 Identities = 16/70 (22%), Positives = 35/70 (50%)
 Frame = -1

Query: 513 VEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRL 334
           V++G+     ++ +++  L  DGR +D     +++ + G  PD+ TY L +   G+    
Sbjct: 462 VQRGVVMTAVAHNLLVQALFMDGRASDAYVVLEEMQNNGPFPDVFTYTLKVLKNGQWAEE 521

Query: 333 EEALSLYNDM 304
           E  + +  D+
Sbjct: 522 ESTILVPGDI 531

>AEP3_ASHGO (Q750L0) ATPase expression protein 3|
          Length = 536

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
 Frame = -1

Query: 486 KSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLIT---YNLLIHGLGKSGRLEEALSL 316
           K   + I  LC + +     S ++ LT +    D++T    N+L++   + GRL+ A+  
Sbjct: 353 KLLRLCISKLCKEYKFE---SAWQLLTSLCRSTDVVTTGSVNILLNAAAEKGRLDLAVLT 409

Query: 315 YNDME-KKGIAPNLYTY 268
           YN M+ + G+ P+L T+
Sbjct: 410 YNSMKVQLGVTPDLRTH 426



 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -1

Query: 483 SYTVVIDTLCADGRLNDG-LSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYN 310
           S  ++++     GRL+   L+Y      +G+ PDL T+ L+   + ++G  E    +Y+
Sbjct: 389 SVNILLNAAAEKGRLDLAVLTYNSMKVQLGVTPDLRTHRLIFKAMARNGYHENFQDVYH 447

>RPB2_TRYBB (P17546) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1766

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -1

Query: 555  AGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRL 439
            A  ++ + EL E+ +  G+N + + YT+++DT+C  G L
Sbjct: 1369 AARSKMLTELREAYLAYGLNINYRHYTILVDTICQHGYL 1407

>RPB1_TRYBB (P17545) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)|
          Length = 1766

 Score = 32.3 bits (72), Expect = 0.99
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -1

Query: 555  AGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRL 439
            A  ++ + EL E+ +  G+N + + YT+++DT+C  G L
Sbjct: 1369 AARSKMLTELREAYLAYGLNINYRHYTILVDTICQHGYL 1407

>RPM2_YEAST (Q02773) Ribonuclease P protein component, mitochondrial precursor|
           (EC 3.1.26.5) (RNase P)
          Length = 1202

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
 Frame = -1

Query: 540 KVCELFESMVEQGMNPDIKSYTVVIDTLC--------ADGRLNDGLSYFKQLTDMGLEPD 385
           K+  L++S+    + P ++ +T V+D+LC         D ++ + L+ ++ + +  L+P 
Sbjct: 205 KINSLYQSLKRNDIVPPLEIFTKVLDSLCKRPLDNNDLDNKMYELLTCYQDMINNRLKPP 264

Query: 384 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLY 274
              YN+++  L K   L       N  +   IA  L+
Sbjct: 265 DEIYNIVLLSLFKGSILAYQFENPNGSDFYKIAIELF 301

>Y1345_METJA (Q58741) Hypothetical protein MJ1345|
          Length = 314

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = -1

Query: 498 NPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGL-EPDLITYNLLIHGLGKSGRLEEAL 322
           N DI++   +I  L   GRLN  L Y K+   +   +P L  Y  +I  L K G+  EA+
Sbjct: 212 NKDIRALMYIIQILIYLGRLNQALEYTKKALKLNPDDPLLYLYKGII--LNKLGKYNEAI 269

Query: 321 SLYNDMEKKGIAPNL 277
             ++ + +  I PN+
Sbjct: 270 KYFDKVLE--INPNI 282

>SRP72_HUMAN (O76094) Signal recognition particle 72 kDa protein (SRP72)|
          Length = 670

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
 Frame = -1

Query: 525 FESMVEQGMNPDIKSYTVVIDTLCA---DGRLNDGLSYFKQLTDM----------GLEPD 385
           +E +V + +     ++ +  +T CA    G+LN  +   ++  D+          G E D
Sbjct: 160 WEKVVPENLGLQEGTHELCYNTACALIGQGQLNQAMKILQKAEDLCRRSLSEDTDGTEED 219

Query: 384 LITYNLLIHG-----LGKSGRLEEALSLYNDMEK 298
                 +IHG     L   GR EEAL LYN + K
Sbjct: 220 PQAELAIIHGQMAYILQLQGRTEEALQLYNQIIK 253

>ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 437

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 106 GRKCVFRAARDAVPPDKGVVCENIGLP 186
           G  C +    DAVPP  G+V  +IGLP
Sbjct: 300 GSSCRYHHPVDAVPPKTGIVLSSIGLP 326

>POLG_RTSVA (Q83034) Genome polyprotein [Contains: Putative leader protein;|
           Coat protein 1 (25 kDa protein) (CP-1); Coat protein 2
           (26 kDa protein) (CP-2); Coat protein 3 (35 kDa protein)
           (CP-3); Putative helicase (EC 3.6.1.-) (Putative
           NTP-binding protei
          Length = 3473

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 22/87 (25%), Positives = 40/87 (45%)
 Frame = -1

Query: 525 FESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGK 346
           F+  V  G    +K++++  D   A+ R+ + LSYF+  T  G+   L   ++ +HG   
Sbjct: 686 FKWKVSDGGGSILKTFSLPSDIWAANDRMKNFLSYFQYYTCEGMTFTLTITSIGLHG--- 742

Query: 345 SGRLEEALSLYNDMEKKGIAPNLYTYN 265
            G L  A    +   ++GI   +   N
Sbjct: 743 -GTLLVAWDALSSATRRGIVSMIQLSN 768

>POLG_RTSVT (Q91PP5) Genome polyprotein [Contains: Putative leader protein;|
           Coat protein 1 (25 kDa protein) (CP-1); Coat protein 2
           (26 kDa protein) (CP-2); Coat protein 3 (35 kDa protein)
           (CP-3); Putative helicase (EC 3.6.1.-) (Putative
           NTP-binding protei
          Length = 3471

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 22/87 (25%), Positives = 40/87 (45%)
 Frame = -1

Query: 525 FESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGK 346
           F+  V  G    +K++++  D   A+ R+ + LSYF+  T  G+   L   ++ +HG   
Sbjct: 683 FKWKVSDGGGSILKTFSLPSDIWAANDRMKNFLSYFQYYTCEGMTFTLTITSIGLHG--- 739

Query: 345 SGRLEEALSLYNDMEKKGIAPNLYTYN 265
            G L  A    +   ++GI   +   N
Sbjct: 740 -GTLLVAWDALSSATRRGIVSMIQLSN 765

>CBX2_MOUSE (P30658) Chromobox protein homolog 2 (Modifier 3 protein) (M33)|
          Length = 519

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -2

Query: 233 RPRKPAKCMKNCWRKAGSPMFSHTTPLSGGTASLAALKTHLRPTVG 96
           RP   AK +K   +  G+       PLS   A LAALK H +   G
Sbjct: 179 RPVSLAKVLKTTRKDLGTSAAKLPPPLSAPVAGLAALKAHTKEACG 224

>KR134_HUMAN (Q3LI77) Keratin-associated protein 13-4|
          Length = 160

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 21/67 (31%), Positives = 27/67 (40%)
 Frame = +3

Query: 120 FQGCQRRCTPG*GRCM*KHWASSLSPAVLHTFCRLPRPSLLCPGRGSVSCTCTGSGRFLS 299
           ++ CQ+ C           W     PA     C  PR S+LC        TC+GS  F S
Sbjct: 48  YRDCQKTC-----------W----EPASCQKSCYRPRTSILCC---PCQTTCSGSLGFRS 89

Query: 300 SPCHCRG 320
           S C  +G
Sbjct: 90  SSCRSQG 96

>TKT2_HUMAN (P51854) Transketolase-like 1 (EC 2.2.1.1) (Transketolase 2) (TK 2)|
           (Transketolase-related protein)
          Length = 557

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
 Frame = -1

Query: 477 TVVIDTLCADGRLNDGLSYFKQ-------LTDMGLEPDLITYNLLIHGLGKSGRLEEALS 319
           T+V      +GR+     ++ Q          + ++PD+  ++L + G+ +SG+ EE L 
Sbjct: 479 TIVSSAKATEGRIITVEDHYPQGGIGEAVCAAVSMDPDIQVHSLAVSGVPQSGKSEELLD 538

Query: 318 LY 313
           +Y
Sbjct: 539 MY 540

>NADE_TREPA (O83759) Probable glutamine-dependent NAD(+) synthetase (EC|
           6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing])
          Length = 679

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +1

Query: 49  KLHVGARVRPTPSNYHPTVGRKCVFRAARDAVPPDKGVVCENIGLPAFRQQFFI 210
           K H   R    P  + P       F+ ++DAVPP  G VC  +  P+  Q  F+
Sbjct: 302 KAHATLRRPRVPCPFFPPA-----FQKSQDAVPPLTGAVCLAVSAPSDTQDGFL 350

>YPX2_CAEEL (Q20256) Hypothetical protein F40H6.2|
          Length = 997

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +2

Query: 482 DFISGFIPCSTILSKSSQTFSVSPAIRYXFS 574
           DF+ GF+P +T ++KS+ + + +P  R+  S
Sbjct: 789 DFVYGFLPTTTTITKSTVSTTTAPLNRFRLS 819

>AEP3_YEAST (Q12089) ATPase expression protein 3|
          Length = 606

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
 Frame = -1

Query: 420 FKQLTDMGLEPDLITYNLLIHGLGKSGRL-------EEALSLYNDMEKKGIAPNLYTYNS 262
           F Q+   G +P+ IT+NLL+  + K+  +       +E L     M   G+  ++ T+ +
Sbjct: 244 FAQMKAEGTKPNTITFNLLLRNVVKNSHIRKTKHPDDEVLFYLRSMRNHGVFADVITWTT 303

Query: 261 LILYL 247
              +L
Sbjct: 304 CYNFL 308



 Score = 29.3 bits (64), Expect = 8.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -1

Query: 270 YNSLILYLXXXXXXXXXXKMYEELLAKGWKPNVFTYNALIR 148
           YN  I +           +++ ++ A+G KPN  T+N L+R
Sbjct: 224 YNDSIYFFSEHFDFASCREIFAQMKAEGTKPNTITFNLLLR 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,195,855
Number of Sequences: 219361
Number of extensions: 1995371
Number of successful extensions: 5170
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5138
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)