Clone Name | rbasd20h02 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK066569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070P03, full insert sequence Length = 2221 Score = 648 bits (327), Expect = 0.0 Identities = 447/487 (91%) Strand = Plus / Minus Query: 130 tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189 |||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2084 tcacgccggcgtgaggccgtgcttgagcgccgccttccagacgacgtcgatccggtcgac 2025 Query: 190 gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249 ||||| ||||||||||||||||||| ||| || |||||||| |||||||| |||||||| Sbjct: 2024 gtcgatggcgcccacctcgtggtgctcccacccttccaggaagtgcaccacgccgccggc 1965 Query: 250 gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309 ||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| || Sbjct: 1964 gtggcacgcgtgcaccaccccgcgttccatcgtgtactcgcagtagccgaggccctggac 1905 Query: 310 gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369 ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || Sbjct: 1904 gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtctcgccggaacccgat 1845 Query: 370 gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429 |||||||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||| Sbjct: 1844 gatcggcggcaccacgaactggtggaagtgtgtccccgccggcgcccacctctgctccct 1785 Query: 430 cggcgacagccacttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggt 489 ||||||||||||||| ||||| ||||||||||||||||| || || | |||||||||||| Sbjct: 1784 cggcgacagccacttccccaccagccacgtcttgcagttttgtgcaggctggtacttggt 1725 Query: 490 gacctgcacgaggtactgctggaactccgccggcgcctccctctggatcttcaggaacct 549 ||||||||||||||||||||||||||| ||||| || |||||||| |||||||| ||||| Sbjct: 1724 gacctgcacgaggtactgctggaactctgccggtgcttccctctgaatcttcagaaacct 1665 Query: 550 ctccgacgacatcgtcagcatgatgactctgatccttttccggcagaggtagagggcgat 609 ||||||||||| |||| ||| | |||||||||| |||| | |||||||||||||||||| Sbjct: 1664 ctccgacgacaatgtcaacatcaggactctgatcttttttctgcagaggtagagggcgat 1605 Query: 610 ggctctg 616 ||||||| Sbjct: 1604 ggctctg 1598
>dbj|AK060909.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F09, full insert sequence Length = 991 Score = 640 bits (323), Expect = e-180 Identities = 446/487 (91%) Strand = Plus / Minus Query: 130 tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189 |||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 854 tcacgccggcgtgaggccgtgcttgagcgccgccttccagacgacgtcgatccggtcgac 795 Query: 190 gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249 ||||| ||||||||||||||||||| ||| || |||||||| |||||||| |||||||| Sbjct: 794 gtcgatggcgcccacctcgtggtgctcccacccttccaggaagtgcaccacgccgccggc 735 Query: 250 gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309 ||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| || Sbjct: 734 gtggcacgcgtgcaccaccccgcgttccatcgtgtactcgcagtagccgaggccctggac 675 Query: 310 gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369 ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || Sbjct: 674 gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtctcgccggaacccgat 615 Query: 370 gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429 |||||||||||| ||||||||||||||||| ||||||| ||| ||||||| ||||||||| Sbjct: 614 gatcggcggcaccacgaactggtggaagtgtgtccccgccggtgcccacctctgctccct 555 Query: 430 cggcgacagccacttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggt 489 ||||||||||||||| ||||| ||||||||||||||||| || || | |||||||||||| Sbjct: 554 cggcgacagccacttccccaccagccacgtcttgcagttttgtgcaggctggtacttggt 495 Query: 490 gacctgcacgaggtactgctggaactccgccggcgcctccctctggatcttcaggaacct 549 ||||||||||||||||||||||||||| ||||| || |||||||| |||||||| ||||| Sbjct: 494 gacctgcacgaggtactgctggaactctgccggtgcttccctctgaatcttcagaaacct 435 Query: 550 ctccgacgacatcgtcagcatgatgactctgatccttttccggcagaggtagagggcgat 609 ||||||||||| |||| ||| | |||||||||| |||| | |||||||||||||||||| Sbjct: 434 ctccgacgacaatgtcaacatcaggactctgatcttttttctgcagaggtagagggcgat 375 Query: 610 ggctctg 616 ||||||| Sbjct: 374 ggctctg 368
>gb|AY103720.1| Zea mays PCO070526 mRNA sequence Length = 1001 Score = 626 bits (316), Expect = e-176 Identities = 442/484 (91%) Strand = Plus / Minus Query: 129 atcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcga 188 |||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 675 atcacaccggcgccagcccgtgcttgagcgccgccttccagacgacgtcgatccggtcga 616 Query: 189 cgtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccgg 248 |||||| ||||||||||||||||| ||| || |||||||| |||||||| ||||||| Sbjct: 615 cgtcgatggcgcccacctcgtggtggccccagccttccaggaagtgcaccacgccgccgg 556 Query: 249 cgtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgca 308 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 555 cgtggcacgcgtgcaccaccccgcgctccatcgtgtactcgcaggagctgaggccctgca 496 Query: 309 cgtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaa 368 |||||||||| |||||||||||||| |||||||||||||||||||| || ||||| || | Sbjct: 495 cgtccttgggcagcctcatggcggccagcttgccgtaggtgcagtcccgccggaagccga 436 Query: 369 tgatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccc 428 |||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||| | Sbjct: 435 tgatgggcggcaccacgaactggtggaagtgcgtcccggacggcgcccaccgctgctcac 376 Query: 429 tcggcgacagccacttgcccacgagccacgtcttgcagttctgcgcggcctggtacttgg 488 ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| Sbjct: 375 gcggcgacagccacttgcccacgatccaagtcttgcagttctgtgcggcctggtacttgg 316 Query: 489 tgacctgcacgaggtactgctggaactccgccggcgcctccctctggatcttcaggaacc 548 | ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||| Sbjct: 315 tcacctgcacgaggtactgctggtactccggcggcgcctccctctggatcttcacgaacc 256 Query: 549 tctccgacgacatcgtcagcatgatgactctgatccttttccggcagaggtagagggcga 608 |||||||||||| ||| | ||| | |||||||||| | |||| |||||||||||| |||| Sbjct: 255 tctccgacgacaccgtgaacatcaggactctgatcttcttcctgcagaggtagagcgcga 196 Query: 609 tggc 612 |||| Sbjct: 195 tggc 192
>gb|AY505498.1| Zea mays glossy1 protein gene, complete cds Length = 7609 Score = 507 bits (256), Expect = e-140 Identities = 382/424 (90%) Strand = Plus / Minus Query: 143 aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202 ||||||||||||||||| |||| ||| ||||||||||| ||||||||||||| |||||| Sbjct: 7297 aggccgtgcttgagcgcggcctcccagacgacgtcgatgcggtcgacgtcgatggcgccc 7238 Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 |||||||||||| | ||||| ||||| || || || ||||||||||||||||||||| Sbjct: 7237 acctcgtggtgcgtgtagccctcgaggaagtggacgaccccgccggcgtggcacgcgtgc 7178 Query: 263 accacccctcgctccatcgtgtactcgcaggagccgaggccctgcacgtccttggggagc 322 |||||||| ||||||| || ||||||||||| |||||||||| ||||||||||||| ||| Sbjct: 7177 accaccccgcgctccagcgagtactcgcaggcgccgaggccccgcacgtccttgggcagc 7118 Query: 323 ctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaatgatcggcggcacg 382 | |||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||| Sbjct: 7117 cgcatggcggcgagcttgccgtaggtgcagtcccggcggaagccgatgatgggcggcacg 7058 Query: 383 acgaactggtggaagtgcgtccccggcggcgcccaccgctgctccctcggcgacagccac 442 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 7057 acgaactggtggaagtgcgtgcccggcggcgcccaccgctgctcccgcggcgacagccac 6998 Query: 443 ttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggtgacctgcacgagg 502 ||||| |||| ||||||| |||||| |||||||| | |||||||||| |||||||| ||| Sbjct: 6997 ttgccgacgatccacgtcctgcagtgctgcgcggaccggtacttggtcacctgcaccagg 6938 Query: 503 tactgctggaactccgccggcgcctccctctggatcttcaggaacctctccgacgacatc 562 ||||||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| | Sbjct: 6937 tactgctggaactccgccggcgcctccttctggatcttctggaaccgctccgtcgacagc 6878 Query: 563 gtca 566 |||| Sbjct: 6877 gtca 6874
>gb|AY505017.1| Zea mays Gl1 protein mRNA, complete cds Length = 2060 Score = 504 bits (254), Expect = e-139 Identities = 389/434 (89%) Strand = Plus / Minus Query: 143 aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202 ||||||||||||||||| |||| ||| ||||||||||| ||||||||||||| |||||| Sbjct: 1923 aggccgtgcttgagcgcggcctcccagacgacgtcgatgcggtcgacgtcgatggcgccc 1864 Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 |||||||||||| | ||||| ||||| || || || ||||||||||||||||||||| Sbjct: 1863 acctcgtggtgcgtgtagccctcgaggaagtggacgaccccgccggcgtggcacgcgtgc 1804 Query: 263 accacccctcgctccatcgtgtactcgcaggagccgaggccctgcacgtccttggggagc 322 |||| ||| ||||||| || ||||||||||| |||||||||| ||||||||||||| ||| Sbjct: 1803 accagcccgcgctccagcgagtactcgcaggcgccgaggccccgcacgtccttgggcagc 1744 Query: 323 ctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaatgatcggcggcacg 382 | |||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||| Sbjct: 1743 cgcatggcggcgagcttgccgtaggtgcagtcccggcggaagccgatgatgggcggcacg 1684 Query: 383 acgaactggtggaagtgcgtccccggcggcgcccaccgctgctccctcggcgacagccac 442 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 1683 acgaactggtggaagtgcgtgcccggcggcgcccaccgctgctcccgcggcgacagccac 1624 Query: 443 ttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggtgacctgcacgagg 502 ||||| |||| ||||||| |||||| |||||||| | |||||||||| |||||||| ||| Sbjct: 1623 ttgccgacgatccacgtcctgcagtgctgcgcggaccggtacttggtcacctgcaccagg 1564 Query: 503 tactgctggaactccgccggcgcctccctctggatcttcaggaacctctccgacgacatc 562 ||||||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| | Sbjct: 1563 tactgctggaactccgccggcgcctccttctggatcttctggaaccgctccgtcgacagc 1504 Query: 563 gtcagcatgatgac 576 |||| ||| ||||| Sbjct: 1503 gtcatcatcatgac 1490
>dbj|AK060786.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D05, full insert sequence Length = 2366 Score = 504 bits (254), Expect = e-139 Identities = 416/470 (88%) Strand = Plus / Minus Query: 143 aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202 ||||||||| |||||||||||| ||||||||||||||| ||||| ||||||| |||||| Sbjct: 2005 aggccgtgcctgagcgccgcctcccacacgacgtcgatgcggtccacgtcgatggcgccc 1946 Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 |||||||||||| | ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 1945 acctcgtggtgcgtgtacccctccaggaagtgcaccacgcctccggcgtggcacgcgtgc 1886 Query: 263 accacccctcgctccatcgtgtactcgcaggagccgaggccctgcacgtccttggggagc 322 |||||||| ||||||| || ||||||||||| |||||||||||| |||||||||||||| Sbjct: 1885 accaccccgcgctccagcgagtactcgcaggcgccgaggccctggacgtccttggggagg 1826 Query: 323 ctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaatgatcggcggcacg 382 | ||||||||||||||||||||||||||||||||||||||| || ||||| || || ||| Sbjct: 1825 cgcatggcggcgagcttgccgtaggtgcagtcgcggcggaagccgatgattggggggacg 1766 Query: 383 acgaactggtggaagtgcgtccccggcggcgcccaccgctgctccctcggcgacagccac 442 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1765 acgaactggtggaagtgcgtccccggcggcgcccaacgctgctccctcggcgacagccac 1706 Query: 443 ttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggtgacctgcacgagg 502 ||||| |||| |||||||||||||| |||||| | | ||||||||| |||||||| ||| Sbjct: 1705 ttgccgacgatccacgtcttgcagtgctgcgccgacctgtacttggtcacctgcaccagg 1646 Query: 503 tactgctggaactccgccggcgcctccctctggatcttcaggaacctctccgacgacatc 562 ||||||||| ||||| || |||||||||||| |||||| |||| ||||||| ||||| | Sbjct: 1645 tactgctggcgctccggcgtcgcctccctctgtatcttctggaatctctccgtcgacagc 1586 Query: 563 gtcagcatgatgactctgatccttttccggcagaggtagagggcgatggc 612 |||| ||| ||||| | || | |||| ||||||||||||||||||||| Sbjct: 1585 gtcatcatcatgacgcggactttcttcctgcagaggtagagggcgatggc 1536
>dbj|AK120227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042K03, full insert sequence Length = 2422 Score = 498 bits (251), Expect = e-137 Identities = 417/471 (88%), Gaps = 1/471 (0%) Strand = Plus / Minus Query: 143 aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202 ||||||||| |||||||||||| ||||||||||||||| ||||| ||||||| |||||| Sbjct: 2008 aggccgtgcctgagcgccgcctcccacacgacgtcgatgcggtccacgtcgatggcgccc 1949 Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 |||||||||||| | ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 1948 acctcgtggtgcgtgtacccctccaggaagtgcaccacgcctccggcgtggcacgcgtgc 1889 Query: 263 accacccctcgctccatcgtgtactcgcaggagccgaggccctgcacgtccttggggagc 322 |||||||| ||||||| || ||||||||||| |||||||||||| |||||||||||||| Sbjct: 1888 accaccccgcgctccagcgagtactcgcaggcgccgaggccctggacgtccttggggagg 1829 Query: 323 ctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaatgatcggcggcacg 382 | ||||||||||||||||||||||||||||||||||||||| || ||||| || || ||| Sbjct: 1828 cgcatggcggcgagcttgccgtaggtgcagtcgcggcggaagccgatgattggggggacg 1769 Query: 383 acgaactggtggaagtg-cgtccccggcggcgcccaccgctgctccctcggcgacagcca 441 ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1768 acgaactggtggaagtgccgtccccggcggcgcccaacgctgctccctcggcgacagcca 1709 Query: 442 cttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggtgacctgcacgag 501 |||||| |||| ||||||||||||||||||||| | | ||||||||| |||||||| || Sbjct: 1708 cttgccgacgatccacgtcttgcagttctgcgccgacctgtacttggtcacctgcaccag 1649 Query: 502 gtactgctggaactccgccggcgcctccctctggatcttcaggaacctctccgacgacat 561 |||||||||| ||||| || |||||||||||| |||||| |||| ||||||| ||||| Sbjct: 1648 gtactgctggtgctccggcgtcgcctccctctgtatcttctggaatctctccgtcgacag 1589 Query: 562 cgtcagcatgatgactctgatccttttccggcagaggtagagggcgatggc 612 ||||| ||| ||||| | || | |||| ||||||||||||||||||||| Sbjct: 1588 cgtcatcatcatgacgcggactttcttcctgcagaggtagagggcgatggc 1538
>dbj|AK070469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054G01, full insert sequence Length = 2233 Score = 458 bits (231), Expect = e-125 Identities = 423/487 (86%) Strand = Plus / Minus Query: 130 tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189 |||| ||||||| ||||||||| ||||||| || ||||| ||| |||||||||||||||| Sbjct: 1997 tcacgccggcgtgaggccgtgcctgagcgcggcgttccagacggcgtcgatccggtcgac 1938 Query: 190 gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249 ||||| ||||| ||||||||||| | ||| ||||||||||| || || || |||||||| Sbjct: 1937 gtcgatggcgccgacctcgtggtggtcccacccctccaggaagtggacgacgccgccggc 1878 Query: 250 gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309 ||||||||||||||| || || || |||| ||||||||||| | || || |||| ||| Sbjct: 1877 gtggcacgcgtgcacgacgccgcggcccatggtgtactcgcacgtccccagcccctccac 1818 Query: 310 gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369 ||||| || |||||||| ||||||||||| ||||| |||||||| || |||||||| || Sbjct: 1817 gtcctccggcagcctcatcgcggcgagcttcccgtacgtgcagtcccgccggaacccgat 1758 Query: 370 gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429 |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1757 gatcggcggcaccacgaactggtggaagtgcgtccccgccggcgcccaccgctgctccct 1698 Query: 430 cggcgacagccacttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggt 489 ||||||||||||||| ||||||| |||||||||||| ||||| || |||||||||||||| Sbjct: 1697 cggcgacagccacttccccacgatccacgtcttgcaattctgtgcagcctggtacttggt 1638 Query: 490 gacctgcacgaggtactgctggaactccgccggcgcctccctctggatcttcaggaacct 549 |||||| || || ||||||||||||||||| || ||||||||||| || |||| |||||| Sbjct: 1637 gacctggaccagatactgctggaactccgcaggggcctccctctgaatattcatgaacct 1578 Query: 550 ctccgacgacatcgtcagcatgatgactctgatccttttccggcagaggtagagggcgat 609 ||||| |||| |||||||| | |||||||||| | |||| ||||||||||| ||||| Sbjct: 1577 ctccgttgacagtgtcagcatcaagactctgatcttcttcctacagaggtagagagcgat 1518 Query: 610 ggctctg 616 ||||||| Sbjct: 1517 ggctctg 1511
>gb|U57338.1|OSU57338 Oryza sativa glossy1 homolog mRNA, partial cds Length = 1903 Score = 450 bits (227), Expect = e-123 Identities = 422/487 (86%) Strand = Plus / Minus Query: 130 tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189 |||| ||||||| ||||||||| ||||||| || ||||| ||| |||||||||||||||| Sbjct: 1668 tcacgccggcgtgaggccgtgcctgagcgcggcgttccagacggcgtcgatccggtcgac 1609 Query: 190 gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249 ||||| ||||| ||||||||||| | ||| ||||||||||| || || || |||||||| Sbjct: 1608 gtcgatggcgccgacctcgtggtggtcccacccctccaggaagtggacgacgccgccggc 1549 Query: 250 gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309 ||||||||||||||| || || || |||| ||||||||||| | || || |||| ||| Sbjct: 1548 gtggcacgcgtgcacgacgccgcggcccatggtgtactcgcacgtccccagcccctccac 1489 Query: 310 gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369 ||||| || |||||||| ||||||||||| ||||| |||||||| || |||||||| || Sbjct: 1488 gtcctccggcagcctcatcgcggcgagcttcccgtacgtgcagtcccgccggaacccgat 1429 Query: 370 gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429 |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1428 gatcggcggcaccacgaactggtggaagtgcgtccccgccggcgcccaccgctgctccct 1369 Query: 430 cggcgacagccacttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggt 489 ||||||||||||||| ||||||| |||||||||||| ||||| || |||||||||||||| Sbjct: 1368 cggcgacagccacttccccacgatccacgtcttgcaattctgtgcagcctggtacttggt 1309 Query: 490 gacctgcacgaggtactgctggaactccgccggcgcctccctctggatcttcaggaacct 549 |||||| || || ||||||||||||||||| || ||||||||||| || |||| |||||| Sbjct: 1308 gacctggaccagatactgctggaactccgcaggggcctccctctgaatattcatgaacct 1249 Query: 550 ctccgacgacatcgtcagcatgatgactctgatccttttccggcagaggtagagggcgat 609 ||||| |||| |||||||| | |||||||||| | |||| |||| |||||| ||||| Sbjct: 1248 ctccgttgacagtgtcagcatcaagactctgatcttcttcctacagaagtagagagcgat 1189 Query: 610 ggctctg 616 ||||||| Sbjct: 1188 ggctctg 1182
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 335 bits (169), Expect = 1e-88 Identities = 253/281 (90%) Strand = Plus / Minus Query: 286 ctcgcaggagccgaggccctgcacgtccttggggagcctcatggcggcgagcttgccgta 345 |||||||| |||||||||||| |||||||||||||| | ||||||||||||||||||||| Sbjct: 15442213 ctcgcaggcgccgaggccctggacgtccttggggaggcgcatggcggcgagcttgccgta 15442154 Query: 346 ggtgcagtcgcggcggaacccaatgatcggcggcacgacgaactggtggaagtgcgtccc 405 |||||||||||||||||| || ||||| || || |||||||||||||||||||||||||| Sbjct: 15442153 ggtgcagtcgcggcggaagccgatgattggggggacgacgaactggtggaagtgcgtccc 15442094 Query: 406 cggcggcgcccaccgctgctccctcggcgacagccacttgcccacgagccacgtcttgca 465 |||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 15442093 cggcggcgcccaacgctgctccctcggcgacagccacttgccgacgatccacgtcttgca 15442034 Query: 466 gttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgccggcgc 525 || |||||| | | ||||||||| |||||||| |||||||||||| ||||| || ||| Sbjct: 15442033 gtgctgcgccgacctgtacttggtcacctgcaccaggtactgctggtgctccggcgtcgc 15441974 Query: 526 ctccctctggatcttcaggaacctctccgacgacatcgtca 566 ||||||||| |||||| |||| ||||||| ||||| ||||| Sbjct: 15441973 ctccctctgtatcttctggaatctctccgtcgacagcgtca 15441933 Score = 153 bits (77), Expect = 8e-34 Identities = 128/145 (88%) Strand = Plus / Minus Query: 143 aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202 ||||||||| |||||||||||| ||||||||||||||| ||||| ||||||| |||||| Sbjct: 15442454 aggccgtgcctgagcgccgcctcccacacgacgtcgatgcggtccacgtcgatggcgccc 15442395 Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 |||||||||||| | ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 15442394 acctcgtggtgcgtgtacccctccaggaagtgcaccacgcctccggcgtggcacgcgtgc 15442335 Query: 263 accacccctcgctccatcgtgtact 287 |||||||| ||||||| || ||||| Sbjct: 15442334 accaccccgcgctccagcgagtact 15442310 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 587 ttccggcagaggtagagggcgatggc 612 |||| ||||||||||||||||||||| Sbjct: 15441812 ttcctgcagaggtagagggcgatggc 15441787
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1299_A11 Length = 160099 Score = 335 bits (169), Expect = 1e-88 Identities = 253/281 (90%) Strand = Plus / Minus Query: 286 ctcgcaggagccgaggccctgcacgtccttggggagcctcatggcggcgagcttgccgta 345 |||||||| |||||||||||| |||||||||||||| | ||||||||||||||||||||| Sbjct: 91505 ctcgcaggcgccgaggccctggacgtccttggggaggcgcatggcggcgagcttgccgta 91446 Query: 346 ggtgcagtcgcggcggaacccaatgatcggcggcacgacgaactggtggaagtgcgtccc 405 |||||||||||||||||| || ||||| || || |||||||||||||||||||||||||| Sbjct: 91445 ggtgcagtcgcggcggaagccgatgattggggggacgacgaactggtggaagtgcgtccc 91386 Query: 406 cggcggcgcccaccgctgctccctcggcgacagccacttgcccacgagccacgtcttgca 465 |||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 91385 cggcggcgcccaacgctgctccctcggcgacagccacttgccgacgatccacgtcttgca 91326 Query: 466 gttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgccggcgc 525 || |||||| | | ||||||||| |||||||| |||||||||||| ||||| || ||| Sbjct: 91325 gtgctgcgccgacctgtacttggtcacctgcaccaggtactgctggtgctccggcgtcgc 91266 Query: 526 ctccctctggatcttcaggaacctctccgacgacatcgtca 566 ||||||||| |||||| |||| ||||||| ||||| ||||| Sbjct: 91265 ctccctctgtatcttctggaatctctccgtcgacagcgtca 91225 Score = 153 bits (77), Expect = 8e-34 Identities = 128/145 (88%) Strand = Plus / Minus Query: 143 aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202 ||||||||| |||||||||||| ||||||||||||||| ||||| ||||||| |||||| Sbjct: 91746 aggccgtgcctgagcgccgcctcccacacgacgtcgatgcggtccacgtcgatggcgccc 91687 Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 |||||||||||| | ||||||||||| |||||||| || |||||||||||||||||| Sbjct: 91686 acctcgtggtgcgtgtacccctccaggaagtgcaccacgcctccggcgtggcacgcgtgc 91627 Query: 263 accacccctcgctccatcgtgtact 287 |||||||| ||||||| || ||||| Sbjct: 91626 accaccccgcgctccagcgagtact 91602 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 587 ttccggcagaggtagagggcgatggc 612 |||| ||||||||||||||||||||| Sbjct: 91104 ttcctgcagaggtagagggcgatggc 91079
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 325 bits (164), Expect = 1e-85 Identities = 290/332 (87%) Strand = Plus / Minus Query: 130 tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189 |||| ||||||| ||||||||| ||||||| || ||||| ||| |||||||||||||||| Sbjct: 26360228 tcacgccggcgtgaggccgtgcctgagcgcggcgttccagacggcgtcgatccggtcgac 26360169 Query: 190 gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249 ||||| ||||| ||||||||||| | ||| ||||||||||| || || || |||||||| Sbjct: 26360168 gtcgatggcgccgacctcgtggtggtcccacccctccaggaagtggacgacgccgccggc 26360109 Query: 250 gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309 ||||||||||||||| || || || |||| ||||||||||| | || || |||| ||| Sbjct: 26360108 gtggcacgcgtgcacgacgccgcggcccatggtgtactcgcacgtccccagcccctccac 26360049 Query: 310 gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369 ||||| || |||||||| ||||||||||| ||||| |||||||| || |||||||| || Sbjct: 26360048 gtcctccggcagcctcatcgcggcgagcttcccgtacgtgcagtcccgccggaacccgat 26359989 Query: 370 gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429 |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 26359988 gatcggcggcaccacgaactggtggaagtgcgtccccgccggcgcccaccgctgctccct 26359929 Query: 430 cggcgacagccacttgcccacgagccacgtct 461 ||||||||||||||| ||||||| |||||||| Sbjct: 26359928 cggcgacagccacttccccacgatccacgtct 26359897 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 460 cttgcagttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgc 519 |||||| ||||| || |||||||||||||||||||| || || ||||||||||||||||| Sbjct: 26359812 cttgcaattctgtgcagcctggtacttggtgacctggaccagatactgctggaactccgc 26359753 Query: 520 cggcgcctccctctggatcttcaggaacctctccg 554 || ||||||||||| || |||| ||||||||||| Sbjct: 26359752 aggggcctccctctgaatattcatgaacctctccg 26359718 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 574 gactctgatccttttccggcagaggtagagggcgatggctctg 616 |||||||||| | |||| ||||||||||| |||||||||||| Sbjct: 26359618 gactctgatcttcttcctacagaggtagagagcgatggctctg 26359576
>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085J13 Length = 130185 Score = 325 bits (164), Expect = 1e-85 Identities = 290/332 (87%) Strand = Plus / Minus Query: 130 tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189 |||| ||||||| ||||||||| ||||||| || ||||| ||| |||||||||||||||| Sbjct: 57955 tcacgccggcgtgaggccgtgcctgagcgcggcgttccagacggcgtcgatccggtcgac 57896 Query: 190 gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249 ||||| ||||| ||||||||||| | ||| ||||||||||| || || || |||||||| Sbjct: 57895 gtcgatggcgccgacctcgtggtggtcccacccctccaggaagtggacgacgccgccggc 57836 Query: 250 gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309 ||||||||||||||| || || || |||| ||||||||||| | || || |||| ||| Sbjct: 57835 gtggcacgcgtgcacgacgccgcggcccatggtgtactcgcacgtccccagcccctccac 57776 Query: 310 gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369 ||||| || |||||||| ||||||||||| ||||| |||||||| || |||||||| || Sbjct: 57775 gtcctccggcagcctcatcgcggcgagcttcccgtacgtgcagtcccgccggaacccgat 57716 Query: 370 gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429 |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 57715 gatcggcggcaccacgaactggtggaagtgcgtccccgccggcgcccaccgctgctccct 57656 Query: 430 cggcgacagccacttgcccacgagccacgtct 461 ||||||||||||||| ||||||| |||||||| Sbjct: 57655 cggcgacagccacttccccacgatccacgtct 57624 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 460 cttgcagttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgc 519 |||||| ||||| || |||||||||||||||||||| || || ||||||||||||||||| Sbjct: 57539 cttgcaattctgtgcagcctggtacttggtgacctggaccagatactgctggaactccgc 57480 Query: 520 cggcgcctccctctggatcttcaggaacctctccg 554 || ||||||||||| || |||| ||||||||||| Sbjct: 57479 aggggcctccctctgaatattcatgaacctctccg 57445 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 574 gactctgatccttttccggcagaggtagagggcgatggctctg 616 |||||||||| | |||| ||||||||||| |||||||||||| Sbjct: 57345 gactctgatcttcttcctacagaggtagagagcgatggctctg 57303
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 262 bits (132), Expect = 1e-66 Identities = 165/176 (93%) Strand = Plus / Plus Query: 286 ctcgcaggagccgaggccctgcacgtccttggggagcctcatggcggcgagcttgccgta 345 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4355574 ctcgcagtagccgaggccctggacgtccttggggagcctcatggcggcgagcttgccgta 4355633 Query: 346 ggtgcagtcgcggcggaacccaatgatcggcggcacgacgaactggtggaagtgcgtccc 405 ||||||||| || |||||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 4355634 ggtgcagtctcgccggaacccgatgatcggcggcaccacgaactggtggaagtgtgtccc 4355693 Query: 406 cggcggcgcccaccgctgctccctcggcgacagccacttgcccacgagccacgtct 461 || ||||||||||| |||||||||||||||||||||||| ||||| |||||||||| Sbjct: 4355694 cgccggcgcccacctctgctccctcggcgacagccacttccccaccagccacgtct 4355749 Score = 218 bits (110), Expect = 2e-53 Identities = 146/158 (92%) Strand = Plus / Plus Query: 130 tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189 |||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4355207 tcacgccggcgtgaggccgtgcttgagcgccgccttccagacgacgtcgatccggtcgac 4355266 Query: 190 gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249 ||||| ||||||||||||||||||| ||| || |||||||| |||||||| |||||||| Sbjct: 4355267 gtcgatggcgcccacctcgtggtgctcccacccttccaggaagtgcaccacgccgccggc 4355326 Query: 250 gtggcacgcgtgcaccacccctcgctccatcgtgtact 287 ||||||||||||||||||||| || ||||||||||||| Sbjct: 4355327 gtggcacgcgtgcaccaccccgcgttccatcgtgtact 4355364 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 460 cttgcagttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgc 519 ||||||||| || || | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 4356234 cttgcagttttgtgcaggctggtacttggtgacctgcacgaggtactgctggaactctgc 4356293 Query: 520 cggcgcctccctctggatcttcaggaacctctccgacgaca 560 ||| || |||||||| |||||||| |||||||||||||||| Sbjct: 4356294 cggtgcttccctctgaatcttcagaaacctctccgacgaca 4356334 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 574 gactctgatccttttccggcagaggtagagggcgatggctctg 616 |||||||||| |||| | ||||||||||||||||||||||||| Sbjct: 4356509 gactctgatcttttttctgcagaggtagagggcgatggctctg 4356551
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 262 bits (132), Expect = 1e-66 Identities = 165/176 (93%) Strand = Plus / Plus Query: 286 ctcgcaggagccgaggccctgcacgtccttggggagcctcatggcggcgagcttgccgta 345 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 39138 ctcgcagtagccgaggccctggacgtccttggggagcctcatggcggcgagcttgccgta 39197 Query: 346 ggtgcagtcgcggcggaacccaatgatcggcggcacgacgaactggtggaagtgcgtccc 405 ||||||||| || |||||||| |||||||||||||| ||||||||||||||||| ||||| Sbjct: 39198 ggtgcagtctcgccggaacccgatgatcggcggcaccacgaactggtggaagtgtgtccc 39257 Query: 406 cggcggcgcccaccgctgctccctcggcgacagccacttgcccacgagccacgtct 461 || ||||||||||| |||||||||||||||||||||||| ||||| |||||||||| Sbjct: 39258 cgccggcgcccacctctgctccctcggcgacagccacttccccaccagccacgtct 39313 Score = 218 bits (110), Expect = 2e-53 Identities = 146/158 (92%) Strand = Plus / Plus Query: 130 tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189 |||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 38771 tcacgccggcgtgaggccgtgcttgagcgccgccttccagacgacgtcgatccggtcgac 38830 Query: 190 gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249 ||||| ||||||||||||||||||| ||| || |||||||| |||||||| |||||||| Sbjct: 38831 gtcgatggcgcccacctcgtggtgctcccacccttccaggaagtgcaccacgccgccggc 38890 Query: 250 gtggcacgcgtgcaccacccctcgctccatcgtgtact 287 ||||||||||||||||||||| || ||||||||||||| Sbjct: 38891 gtggcacgcgtgcaccaccccgcgttccatcgtgtact 38928 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 460 cttgcagttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgc 519 ||||||||| || || | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 39798 cttgcagttttgtgcaggctggtacttggtgacctgcacgaggtactgctggaactctgc 39857 Query: 520 cggcgcctccctctggatcttcaggaacctctccgacgaca 560 ||| || |||||||| |||||||| |||||||||||||||| Sbjct: 39858 cggtgcttccctctgaatcttcagaaacctctccgacgaca 39898 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 574 gactctgatccttttccggcagaggtagagggcgatggctctg 616 |||||||||| |||| | ||||||||||||||||||||||||| Sbjct: 40073 gactctgatcttttttctgcagaggtagagggcgatggctctg 40115
>ref|NM_125164.2| Arabidopsis thaliana WAX2; catalytic AT5G57800 (WAX2) mRNA, complete cds Length = 2499 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || Sbjct: 2191 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 2132 Query: 263 accacccctcgctccatcgtgtactcgca 291 |||||||||| |||||||||||||||||| Sbjct: 2131 accacccctctctccatcgtgtactcgca 2103
>gb|AY131334.1| Arabidopsis thaliana cuticle protein (WAX2) mRNA, complete cds Length = 2500 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || Sbjct: 2187 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 2128 Query: 263 accacccctcgctccatcgtgtactcgca 291 |||||||||| |||||||||||||||||| Sbjct: 2127 accacccctctctccatcgtgtactcgca 2099
>gb|AY042825.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 766 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || Sbjct: 486 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 427 Query: 263 accacccctcgctccatcgtgtactcgca 291 |||||||||| |||||||||||||||||| Sbjct: 426 accacccctctctccatcgtgtactcgca 398
>emb|BX833245.1|CNS09Z7G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1259 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || Sbjct: 990 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 931 Query: 263 accacccctcgctccatcgtgtactcgca 291 |||||||||| |||||||||||||||||| Sbjct: 930 accacccctctctccatcgtgtactcgca 902
>dbj|AB099512.1| Arabidopsis thaliana FLP1 mRNA for faceless pollen-1, complete cds Length = 2473 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || Sbjct: 2188 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 2129 Query: 263 accacccctcgctccatcgtgtactcgca 291 |||||||||| |||||||||||||||||| Sbjct: 2128 accacccctctctccatcgtgtactcgca 2100
>dbj|AB116548.1| Arabidopsis thaliana YRE mRNA for YORE-YORE protein, complete cds Length = 2182 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || Sbjct: 1897 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 1838 Query: 263 accacccctcgctccatcgtgtactcgca 291 |||||||||| |||||||||||||||||| Sbjct: 1837 accacccctctctccatcgtgtactcgca 1809
>gb|BT002119.1| Arabidopsis thaliana Unknown protein (At5g57800) mRNA, complete cds Length = 514 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || Sbjct: 368 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 309 Query: 263 accacccctcgctccatcgtgtactcgca 291 |||||||||| |||||||||||||||||| Sbjct: 308 accacccctctctccatcgtgtactcgca 280
>dbj|AB013396.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTI20 Length = 79676 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || Sbjct: 20507 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 20448 Query: 263 accacccctcgctccatcgtgtact 287 |||||||||| |||||||||||||| Sbjct: 20447 accacccctctctccatcgtgtact 20423
>dbj|AP004511.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT17H19, TM0041, complete sequence Length = 108987 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 239 actccgccggcgtggcacgcgtgcaccacccctcgctccatcgtgtact 287 ||||| ||||||||||||||||| ||||| |||| |||||||||||||| Sbjct: 51036 actcctccggcgtggcacgcgtgaaccactcctctctccatcgtgtact 51084
>emb|BX833619.1|CNS09Z2C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 520 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Minus Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 ||||| || |||| ||||||||| || | ||| |||||||| || | |||||| | || Sbjct: 252 acctcatgctgcttccaaccctcaagcatatgaaccactcctccttcatggcactcatgt 193 Query: 263 accacccctcgctccatcgtgtactc 288 |||||||||| ||||||||||||||| Sbjct: 192 accacccctctctccatcgtgtactc 167
>emb|BX833262.1|CNS09Z1Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZF09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 944 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262 ||||| || |||| ||||||||| || | || |||||||| || || |||||||| || Sbjct: 662 acctcatgatgcttccaaccctcaagcatattaaccactcctcctgcatggcacgcatgt 603 Query: 263 accacccctcgctccatcgtgtactcgca 291 ||||||||| ||||||||||||| |||| Sbjct: 602 cccacccctctctccatcgtgtacccgca 574
>ref|XM_747887.1| Aspergillus fumigatus Af293 copper-transporting ATPase (Afu1g16130) partial mRNA Length = 3357 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 466 gttctgcgcggcctggtacttggtgac 492 ||||||||||||||||| ||||||||| Sbjct: 615 gttctgcgcggcctggtccttggtgac 589
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 518 gccggcgcctccctctggatcttcaggaacctc 550 |||| |||| ||||| ||||||||||||||||| Sbjct: 1523162 gccgacgccaccctcaggatcttcaggaacctc 1523194
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 ccggtcgacgtcgagcgcgcc 201 ||||||||||||||||||||| Sbjct: 78053 ccggtcgacgtcgagcgcgcc 78073
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence Length = 984602 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 6 gtattagtggtacatttgacatgaatgga 34 |||||||||| |||| ||||||||||||| Sbjct: 978039 gtattagtggaacatatgacatgaatgga 978067
>emb|CR936790.1| Homo sapiens mRNA; cDNA DKFZp686F14110 (from clone DKFZp686F14110) Length = 5397 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 524 gcctccctctggatcttcagg 544 ||||||||||||||||||||| Sbjct: 421 gcctccctctggatcttcagg 441
>gb|AC016628.6| Homo sapiens chromosome 19 clone LLNL-R_266C8, complete sequence Length = 41153 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 gcctccctctggatcttcagg 544 ||||||||||||||||||||| Sbjct: 16049 gcctccctctggatcttcagg 16029
>gb|AC018710.4|AC018710 Homo sapiens BAC clone RP11-296L20 from 4, complete sequence Length = 197236 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 gcctccctctggatcttcagg 544 ||||||||||||||||||||| Sbjct: 64888 gcctccctctggatcttcagg 64868
>gb|AC010300.8| Homo sapiens chromosome 19 clone CTB-176F20, complete sequence Length = 73684 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 524 gcctccctctggatcttcagg 544 ||||||||||||||||||||| Sbjct: 59897 gcctccctctggatcttcagg 59877
>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence Length = 218156 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 atgggggatggaggagggag 73 |||||||||||||||||||| Sbjct: 143374 atgggggatggaggagggag 143393
>ref|XM_470828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1014 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 tcatggcggcgagcttgccg 343 |||||||||||||||||||| Sbjct: 205 tcatggcggcgagcttgccg 186
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gtcaggccgtgcttgagcgc 159 |||||||||||||||||||| Sbjct: 4805622 gtcaggccgtgcttgagcgc 4805641
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 cgacgtcgatccggtcgacg 190 |||||||||||||||||||| Sbjct: 2378164 cgacgtcgatccggtcgacg 2378145
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ggcgagcttgccgtaggtgc 350 |||||||||||||||||||| Sbjct: 69622 ggcgagcttgccgtaggtgc 69641
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 tcatggcggcgagcttgccg 343 |||||||||||||||||||| Sbjct: 15622326 tcatggcggcgagcttgccg 15622345
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cgacgtcgatccggtcgacg 190 |||||||||||||||||||| Sbjct: 2006401 cgacgtcgatccggtcgacg 2006420
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 tcaggccgtgcttgagcgcc 160 |||||||||||||||||||| Sbjct: 5200163 tcaggccgtgcttgagcgcc 5200182
>tpg|BK003353.1| TPA: TPA_inf: Drosophila melanogaster HDC01525 (HDC01525) gene, complete cds Length = 2178 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ttagtggtacatttgacatg 28 |||||||||||||||||||| Sbjct: 1074 ttagtggtacatttgacatg 1093
>gb|AC097356.2| Homo sapiens chromosome 3 clone RP11-107K23, complete sequence Length = 147267 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 ggtagagggcgatggctctg 616 |||||||||||||||||||| Sbjct: 69747 ggtagagggcgatggctctg 69766
>gb|AC093045.1| Drosophila melanogaster, chromosome 2L, region 29E-29E, BAC clone BACR01O16, complete sequence Length = 189904 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ttagtggtacatttgacatg 28 |||||||||||||||||||| Sbjct: 74043 ttagtggtacatttgacatg 74062
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 tcatggcggcgagcttgccg 343 |||||||||||||||||||| Sbjct: 32280 tcatggcggcgagcttgccg 32299
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 tcatggcggcgagcttgccg 343 |||||||||||||||||||| Sbjct: 15616860 tcatggcggcgagcttgccg 15616879
>gb|AC022846.9| Homo sapiens chromosome 8, clone RP11-253N21, complete sequence Length = 123570 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 gtgctgccaaccctccagga 230 |||||||||||||||||||| Sbjct: 119774 gtgctgccaaccctccagga 119793
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 490 gacctgcacgaggtactgctggaactcc 517 ||||||||||| | |||||||||||||| Sbjct: 2786201 gacctgcacgaagcactgctggaactcc 2786228
>gb|AE004577.1| Pseudomonas aeruginosa PAO1, section 138 of 529 of the complete genome Length = 13737 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gagcttgccgtaggtgcagt 353 |||||||||||||||||||| Sbjct: 8509 gagcttgccgtaggtgcagt 8490
>gb|AC022910.9| Homo sapiens chromosome 8, clone RP11-710C11, complete sequence Length = 181944 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 gtgctgccaaccctccagga 230 |||||||||||||||||||| Sbjct: 29713 gtgctgccaaccctccagga 29732
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cgtcgagcgcgcccacctcg 208 |||||||||||||||||||| Sbjct: 3462199 cgtcgagcgcgcccacctcg 3462218
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 acgacgaactggtggaagtg 399 |||||||||||||||||||| Sbjct: 1638230 acgacgaactggtggaagtg 1638211
>emb|CR936382.9| Zebrafish DNA sequence from clone CH211-220F20 in linkage group 18, complete sequence Length = 78500 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 ggagtggagtacaatacaat 51 |||||||||||||||||||| Sbjct: 68241 ggagtggagtacaatacaat 68260
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 tcgatccggtcgacgtcgagcgcg 199 |||| ||||||||||||||||||| Sbjct: 887253 tcgagccggtcgacgtcgagcgcg 887276
>gb|AE003622.4| Drosophila melanogaster chromosome 2L, section 31 of 83 of the complete sequence Length = 262557 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 ttagtggtacatttgacatg 28 |||||||||||||||||||| Sbjct: 163638 ttagtggtacatttgacatg 163657
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 154 gagcgccgccttccacacgacgtcgatccggtcgacgtcg 193 ||||| ||||| |||||| |||||||| ||||||||||| Sbjct: 50215 gagcgtcgcctcgcacacggcgtcgatcaggtcgacgtcg 50254
>gb|AC005416.1|AC005416 Drosophila melanogaster DNA sequence (P1 DS00901 (D289)), complete sequence Length = 57336 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ttagtggtacatttgacatg 28 |||||||||||||||||||| Sbjct: 33741 ttagtggtacatttgacatg 33722
>gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, complete sequence Length = 209693 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 atgggggatggaggagggag 73 |||||||||||||||||||| Sbjct: 40386 atgggggatggaggagggag 40367 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,718,330 Number of Sequences: 3902068 Number of extensions: 3718330 Number of successful extensions: 78875 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77390 Number of HSP's gapped (non-prelim): 1476 length of query: 616 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 593 effective length of database: 17,143,297,704 effective search space: 10165975538472 effective search space used: 10165975538472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)