ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK066569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 648 0.0
2dbj|AK060909.1| Oryza sativa (japonica cultivar-group) cDNA clon... 640 e-180
3gb|AY103720.1| Zea mays PCO070526 mRNA sequence 626 e-176
4gb|AY505498.1| Zea mays glossy1 protein gene, complete cds 507 e-140
5gb|AY505017.1| Zea mays Gl1 protein mRNA, complete cds 504 e-139
6dbj|AK060786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 504 e-139
7dbj|AK120227.1| Oryza sativa (japonica cultivar-group) cDNA clon... 498 e-137
8dbj|AK070469.1| Oryza sativa (japonica cultivar-group) cDNA clon... 458 e-125
9gb|U57338.1|OSU57338 Oryza sativa glossy1 homolog mRNA, partial cds 450 e-123
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 335 1e-88
11dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D... 335 1e-88
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 325 1e-85
13dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic D... 325 1e-85
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
15dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
16ref|NM_125164.2| Arabidopsis thaliana WAX2; catalytic AT5G57800 ... 74 6e-10
17gb|AY131334.1| Arabidopsis thaliana cuticle protein (WAX2) mRNA,... 74 6e-10
18gb|AY042825.1| Arabidopsis thaliana Unknown protein mRNA, comple... 74 6e-10
19emb|BX833245.1|CNS09Z7G Arabidopsis thaliana Full-length cDNA Co... 74 6e-10
20dbj|AB099512.1| Arabidopsis thaliana FLP1 mRNA for faceless poll... 74 6e-10
21dbj|AB116548.1| Arabidopsis thaliana YRE mRNA for YORE-YORE prot... 74 6e-10
22gb|BT002119.1| Arabidopsis thaliana Unknown protein (At5g57800) ... 74 6e-10
23dbj|AB013396.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 66 1e-07
24dbj|AP004511.1| Lotus japonicus genomic DNA, chromosome 6, clone... 66 1e-07
25emb|BX833619.1|CNS09Z2C Arabidopsis thaliana Full-length cDNA Co... 52 0.002
26emb|BX833262.1|CNS09Z1Q Arabidopsis thaliana Full-length cDNA Co... 50 0.009
27ref|XM_747887.1| Aspergillus fumigatus Af293 copper-transporting... 46 0.14
28gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 42 2.1
29emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete ch... 42 2.1
30emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 42 2.1
31emb|CR936790.1| Homo sapiens mRNA; cDNA DKFZp686F14110 (from clo... 42 2.1
32gb|AC016628.6| Homo sapiens chromosome 19 clone LLNL-R_266C8, co... 42 2.1
33gb|AC018710.4|AC018710 Homo sapiens BAC clone RP11-296L20 from 4... 42 2.1
34gb|AC010300.8| Homo sapiens chromosome 19 clone CTB-176F20, comp... 42 2.1
35gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, c... 40 8.4
36ref|XM_470828.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.4
37gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 8.4
38gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 8.4
39gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 8.4
40gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.4
41emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.4
42gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 8.4
43tpg|BK003353.1| TPA: TPA_inf: Drosophila melanogaster HDC01525 (... 40 8.4
44gb|AC097356.2| Homo sapiens chromosome 3 clone RP11-107K23, comp... 40 8.4
45gb|AC093045.1| Drosophila melanogaster, chromosome 2L, region 29... 40 8.4
46gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genom... 40 8.4
47dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
48gb|AC022846.9| Homo sapiens chromosome 8, clone RP11-253N21, com... 40 8.4
49gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 8.4
50gb|AE004577.1| Pseudomonas aeruginosa PAO1, section 138 of 529 o... 40 8.4
51gb|AC022910.9| Homo sapiens chromosome 8, clone RP11-710C11, com... 40 8.4
52gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.4
53dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 8.4
54emb|CR936382.9| Zebrafish DNA sequence from clone CH211-220F20 i... 40 8.4
55gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 8.4
56gb|AE003622.4| Drosophila melanogaster chromosome 2L, section 31... 40 8.4
57gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 8.4
58gb|AC005416.1|AC005416 Drosophila melanogaster DNA sequence (P1 ... 40 8.4
59gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, compl... 40 8.4

>dbj|AK066569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070P03, full
            insert sequence
          Length = 2221

 Score =  648 bits (327), Expect = 0.0
 Identities = 447/487 (91%)
 Strand = Plus / Minus

                                                                        
Query: 130  tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189
            |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2084 tcacgccggcgtgaggccgtgcttgagcgccgccttccagacgacgtcgatccggtcgac 2025

                                                                        
Query: 190  gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249
            |||||  ||||||||||||||||||| ||| || |||||||| |||||||| ||||||||
Sbjct: 2024 gtcgatggcgcccacctcgtggtgctcccacccttccaggaagtgcaccacgccgccggc 1965

                                                                        
Query: 250  gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309
            ||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| ||
Sbjct: 1964 gtggcacgcgtgcaccaccccgcgttccatcgtgtactcgcagtagccgaggccctggac 1905

                                                                        
Query: 310  gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369
            ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 1904 gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtctcgccggaacccgat 1845

                                                                        
Query: 370  gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429
            |||||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||
Sbjct: 1844 gatcggcggcaccacgaactggtggaagtgtgtccccgccggcgcccacctctgctccct 1785

                                                                        
Query: 430  cggcgacagccacttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggt 489
            ||||||||||||||| ||||| ||||||||||||||||| || || | ||||||||||||
Sbjct: 1784 cggcgacagccacttccccaccagccacgtcttgcagttttgtgcaggctggtacttggt 1725

                                                                        
Query: 490  gacctgcacgaggtactgctggaactccgccggcgcctccctctggatcttcaggaacct 549
            ||||||||||||||||||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 1724 gacctgcacgaggtactgctggaactctgccggtgcttccctctgaatcttcagaaacct 1665

                                                                        
Query: 550  ctccgacgacatcgtcagcatgatgactctgatccttttccggcagaggtagagggcgat 609
            |||||||||||  |||| ||| | |||||||||| |||| | ||||||||||||||||||
Sbjct: 1664 ctccgacgacaatgtcaacatcaggactctgatcttttttctgcagaggtagagggcgat 1605

                   
Query: 610  ggctctg 616
            |||||||
Sbjct: 1604 ggctctg 1598



to top

>dbj|AK060909.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F09, full
           insert sequence
          Length = 991

 Score =  640 bits (323), Expect = e-180
 Identities = 446/487 (91%)
 Strand = Plus / Minus

                                                                       
Query: 130 tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189
           |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 854 tcacgccggcgtgaggccgtgcttgagcgccgccttccagacgacgtcgatccggtcgac 795

                                                                       
Query: 190 gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249
           |||||  ||||||||||||||||||| ||| || |||||||| |||||||| ||||||||
Sbjct: 794 gtcgatggcgcccacctcgtggtgctcccacccttccaggaagtgcaccacgccgccggc 735

                                                                       
Query: 250 gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309
           ||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| ||
Sbjct: 734 gtggcacgcgtgcaccaccccgcgttccatcgtgtactcgcagtagccgaggccctggac 675

                                                                       
Query: 310 gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369
           ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 674 gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtctcgccggaacccgat 615

                                                                       
Query: 370 gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429
           |||||||||||| ||||||||||||||||| ||||||| ||| ||||||| |||||||||
Sbjct: 614 gatcggcggcaccacgaactggtggaagtgtgtccccgccggtgcccacctctgctccct 555

                                                                       
Query: 430 cggcgacagccacttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggt 489
           ||||||||||||||| ||||| ||||||||||||||||| || || | ||||||||||||
Sbjct: 554 cggcgacagccacttccccaccagccacgtcttgcagttttgtgcaggctggtacttggt 495

                                                                       
Query: 490 gacctgcacgaggtactgctggaactccgccggcgcctccctctggatcttcaggaacct 549
           ||||||||||||||||||||||||||| ||||| || |||||||| |||||||| |||||
Sbjct: 494 gacctgcacgaggtactgctggaactctgccggtgcttccctctgaatcttcagaaacct 435

                                                                       
Query: 550 ctccgacgacatcgtcagcatgatgactctgatccttttccggcagaggtagagggcgat 609
           |||||||||||  |||| ||| | |||||||||| |||| | ||||||||||||||||||
Sbjct: 434 ctccgacgacaatgtcaacatcaggactctgatcttttttctgcagaggtagagggcgat 375

                  
Query: 610 ggctctg 616
           |||||||
Sbjct: 374 ggctctg 368



to top

>gb|AY103720.1| Zea mays PCO070526 mRNA sequence
          Length = 1001

 Score =  626 bits (316), Expect = e-176
 Identities = 442/484 (91%)
 Strand = Plus / Minus

                                                                       
Query: 129 atcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcga 188
           |||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 675 atcacaccggcgccagcccgtgcttgagcgccgccttccagacgacgtcgatccggtcga 616

                                                                       
Query: 189 cgtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccgg 248
           ||||||  |||||||||||||||||   ||| || |||||||| |||||||| |||||||
Sbjct: 615 cgtcgatggcgcccacctcgtggtggccccagccttccaggaagtgcaccacgccgccgg 556

                                                                       
Query: 249 cgtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgca 308
           |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 555 cgtggcacgcgtgcaccaccccgcgctccatcgtgtactcgcaggagctgaggccctgca 496

                                                                       
Query: 309 cgtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaa 368
           |||||||||| |||||||||||||| |||||||||||||||||||| || ||||| || |
Sbjct: 495 cgtccttgggcagcctcatggcggccagcttgccgtaggtgcagtcccgccggaagccga 436

                                                                       
Query: 369 tgatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccc 428
           |||| |||||||| ||||||||||||||||||||||| | |||||||||||||||||| |
Sbjct: 435 tgatgggcggcaccacgaactggtggaagtgcgtcccggacggcgcccaccgctgctcac 376

                                                                       
Query: 429 tcggcgacagccacttgcccacgagccacgtcttgcagttctgcgcggcctggtacttgg 488
            ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 375 gcggcgacagccacttgcccacgatccaagtcttgcagttctgtgcggcctggtacttgg 316

                                                                       
Query: 489 tgacctgcacgaggtactgctggaactccgccggcgcctccctctggatcttcaggaacc 548
           | ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||
Sbjct: 315 tcacctgcacgaggtactgctggtactccggcggcgcctccctctggatcttcacgaacc 256

                                                                       
Query: 549 tctccgacgacatcgtcagcatgatgactctgatccttttccggcagaggtagagggcga 608
           |||||||||||| ||| | ||| | |||||||||| | |||| |||||||||||| ||||
Sbjct: 255 tctccgacgacaccgtgaacatcaggactctgatcttcttcctgcagaggtagagcgcga 196

               
Query: 609 tggc 612
           ||||
Sbjct: 195 tggc 192



to top

>gb|AY505498.1| Zea mays glossy1 protein gene, complete cds
          Length = 7609

 Score =  507 bits (256), Expect = e-140
 Identities = 382/424 (90%)
 Strand = Plus / Minus

                                                                        
Query: 143  aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202
            ||||||||||||||||| |||| ||| ||||||||||| |||||||||||||  ||||||
Sbjct: 7297 aggccgtgcttgagcgcggcctcccagacgacgtcgatgcggtcgacgtcgatggcgccc 7238

                                                                        
Query: 203  acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
            ||||||||||||    | ||||| ||||| || || || |||||||||||||||||||||
Sbjct: 7237 acctcgtggtgcgtgtagccctcgaggaagtggacgaccccgccggcgtggcacgcgtgc 7178

                                                                        
Query: 263  accacccctcgctccatcgtgtactcgcaggagccgaggccctgcacgtccttggggagc 322
            |||||||| ||||||| || ||||||||||| |||||||||| ||||||||||||| |||
Sbjct: 7177 accaccccgcgctccagcgagtactcgcaggcgccgaggccccgcacgtccttgggcagc 7118

                                                                        
Query: 323  ctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaatgatcggcggcacg 382
            | |||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||
Sbjct: 7117 cgcatggcggcgagcttgccgtaggtgcagtcccggcggaagccgatgatgggcggcacg 7058

                                                                        
Query: 383  acgaactggtggaagtgcgtccccggcggcgcccaccgctgctccctcggcgacagccac 442
            |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 7057 acgaactggtggaagtgcgtgcccggcggcgcccaccgctgctcccgcggcgacagccac 6998

                                                                        
Query: 443  ttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggtgacctgcacgagg 502
            ||||| |||| ||||||| |||||| |||||||| | |||||||||| |||||||| |||
Sbjct: 6997 ttgccgacgatccacgtcctgcagtgctgcgcggaccggtacttggtcacctgcaccagg 6938

                                                                        
Query: 503  tactgctggaactccgccggcgcctccctctggatcttcaggaacctctccgacgacatc 562
            ||||||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |
Sbjct: 6937 tactgctggaactccgccggcgcctccttctggatcttctggaaccgctccgtcgacagc 6878

                
Query: 563  gtca 566
            ||||
Sbjct: 6877 gtca 6874



to top

>gb|AY505017.1| Zea mays Gl1 protein mRNA, complete cds
          Length = 2060

 Score =  504 bits (254), Expect = e-139
 Identities = 389/434 (89%)
 Strand = Plus / Minus

                                                                        
Query: 143  aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202
            ||||||||||||||||| |||| ||| ||||||||||| |||||||||||||  ||||||
Sbjct: 1923 aggccgtgcttgagcgcggcctcccagacgacgtcgatgcggtcgacgtcgatggcgccc 1864

                                                                        
Query: 203  acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
            ||||||||||||    | ||||| ||||| || || || |||||||||||||||||||||
Sbjct: 1863 acctcgtggtgcgtgtagccctcgaggaagtggacgaccccgccggcgtggcacgcgtgc 1804

                                                                        
Query: 263  accacccctcgctccatcgtgtactcgcaggagccgaggccctgcacgtccttggggagc 322
            |||| ||| ||||||| || ||||||||||| |||||||||| ||||||||||||| |||
Sbjct: 1803 accagcccgcgctccagcgagtactcgcaggcgccgaggccccgcacgtccttgggcagc 1744

                                                                        
Query: 323  ctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaatgatcggcggcacg 382
            | |||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||
Sbjct: 1743 cgcatggcggcgagcttgccgtaggtgcagtcccggcggaagccgatgatgggcggcacg 1684

                                                                        
Query: 383  acgaactggtggaagtgcgtccccggcggcgcccaccgctgctccctcggcgacagccac 442
            |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 1683 acgaactggtggaagtgcgtgcccggcggcgcccaccgctgctcccgcggcgacagccac 1624

                                                                        
Query: 443  ttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggtgacctgcacgagg 502
            ||||| |||| ||||||| |||||| |||||||| | |||||||||| |||||||| |||
Sbjct: 1623 ttgccgacgatccacgtcctgcagtgctgcgcggaccggtacttggtcacctgcaccagg 1564

                                                                        
Query: 503  tactgctggaactccgccggcgcctccctctggatcttcaggaacctctccgacgacatc 562
            ||||||||||||||||||||||||||| ||||||||||| |||||| ||||| ||||| |
Sbjct: 1563 tactgctggaactccgccggcgcctccttctggatcttctggaaccgctccgtcgacagc 1504

                          
Query: 563  gtcagcatgatgac 576
            |||| ||| |||||
Sbjct: 1503 gtcatcatcatgac 1490



to top

>dbj|AK060786.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D05, full
            insert sequence
          Length = 2366

 Score =  504 bits (254), Expect = e-139
 Identities = 416/470 (88%)
 Strand = Plus / Minus

                                                                        
Query: 143  aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202
            ||||||||| |||||||||||| ||||||||||||||| ||||| |||||||  ||||||
Sbjct: 2005 aggccgtgcctgagcgccgcctcccacacgacgtcgatgcggtccacgtcgatggcgccc 1946

                                                                        
Query: 203  acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
            ||||||||||||    | ||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 1945 acctcgtggtgcgtgtacccctccaggaagtgcaccacgcctccggcgtggcacgcgtgc 1886

                                                                        
Query: 263  accacccctcgctccatcgtgtactcgcaggagccgaggccctgcacgtccttggggagc 322
            |||||||| ||||||| || ||||||||||| |||||||||||| |||||||||||||| 
Sbjct: 1885 accaccccgcgctccagcgagtactcgcaggcgccgaggccctggacgtccttggggagg 1826

                                                                        
Query: 323  ctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaatgatcggcggcacg 382
            | ||||||||||||||||||||||||||||||||||||||| || ||||| || || |||
Sbjct: 1825 cgcatggcggcgagcttgccgtaggtgcagtcgcggcggaagccgatgattggggggacg 1766

                                                                        
Query: 383  acgaactggtggaagtgcgtccccggcggcgcccaccgctgctccctcggcgacagccac 442
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1765 acgaactggtggaagtgcgtccccggcggcgcccaacgctgctccctcggcgacagccac 1706

                                                                        
Query: 443  ttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggtgacctgcacgagg 502
            ||||| |||| |||||||||||||| |||||| | |  ||||||||| |||||||| |||
Sbjct: 1705 ttgccgacgatccacgtcttgcagtgctgcgccgacctgtacttggtcacctgcaccagg 1646

                                                                        
Query: 503  tactgctggaactccgccggcgcctccctctggatcttcaggaacctctccgacgacatc 562
            |||||||||  ||||| || |||||||||||| |||||| |||| ||||||| ||||| |
Sbjct: 1645 tactgctggcgctccggcgtcgcctccctctgtatcttctggaatctctccgtcgacagc 1586

                                                              
Query: 563  gtcagcatgatgactctgatccttttccggcagaggtagagggcgatggc 612
            |||| ||| ||||| | ||   | |||| |||||||||||||||||||||
Sbjct: 1585 gtcatcatcatgacgcggactttcttcctgcagaggtagagggcgatggc 1536



to top

>dbj|AK120227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042K03, full
            insert sequence
          Length = 2422

 Score =  498 bits (251), Expect = e-137
 Identities = 417/471 (88%), Gaps = 1/471 (0%)
 Strand = Plus / Minus

                                                                        
Query: 143  aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202
            ||||||||| |||||||||||| ||||||||||||||| ||||| |||||||  ||||||
Sbjct: 2008 aggccgtgcctgagcgccgcctcccacacgacgtcgatgcggtccacgtcgatggcgccc 1949

                                                                        
Query: 203  acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
            ||||||||||||    | ||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 1948 acctcgtggtgcgtgtacccctccaggaagtgcaccacgcctccggcgtggcacgcgtgc 1889

                                                                        
Query: 263  accacccctcgctccatcgtgtactcgcaggagccgaggccctgcacgtccttggggagc 322
            |||||||| ||||||| || ||||||||||| |||||||||||| |||||||||||||| 
Sbjct: 1888 accaccccgcgctccagcgagtactcgcaggcgccgaggccctggacgtccttggggagg 1829

                                                                        
Query: 323  ctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaatgatcggcggcacg 382
            | ||||||||||||||||||||||||||||||||||||||| || ||||| || || |||
Sbjct: 1828 cgcatggcggcgagcttgccgtaggtgcagtcgcggcggaagccgatgattggggggacg 1769

                                                                        
Query: 383  acgaactggtggaagtg-cgtccccggcggcgcccaccgctgctccctcggcgacagcca 441
            ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1768 acgaactggtggaagtgccgtccccggcggcgcccaacgctgctccctcggcgacagcca 1709

                                                                        
Query: 442  cttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggtgacctgcacgag 501
            |||||| |||| ||||||||||||||||||||| | |  ||||||||| |||||||| ||
Sbjct: 1708 cttgccgacgatccacgtcttgcagttctgcgccgacctgtacttggtcacctgcaccag 1649

                                                                        
Query: 502  gtactgctggaactccgccggcgcctccctctggatcttcaggaacctctccgacgacat 561
            ||||||||||  ||||| || |||||||||||| |||||| |||| ||||||| ||||| 
Sbjct: 1648 gtactgctggtgctccggcgtcgcctccctctgtatcttctggaatctctccgtcgacag 1589

                                                               
Query: 562  cgtcagcatgatgactctgatccttttccggcagaggtagagggcgatggc 612
            ||||| ||| ||||| | ||   | |||| |||||||||||||||||||||
Sbjct: 1588 cgtcatcatcatgacgcggactttcttcctgcagaggtagagggcgatggc 1538



to top

>dbj|AK070469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054G01, full
            insert sequence
          Length = 2233

 Score =  458 bits (231), Expect = e-125
 Identities = 423/487 (86%)
 Strand = Plus / Minus

                                                                        
Query: 130  tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189
            |||| ||||||| ||||||||| ||||||| || ||||| ||| ||||||||||||||||
Sbjct: 1997 tcacgccggcgtgaggccgtgcctgagcgcggcgttccagacggcgtcgatccggtcgac 1938

                                                                        
Query: 190  gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249
            |||||  ||||| ||||||||||| | ||| ||||||||||| || || || ||||||||
Sbjct: 1937 gtcgatggcgccgacctcgtggtggtcccacccctccaggaagtggacgacgccgccggc 1878

                                                                        
Query: 250  gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309
            ||||||||||||||| || || ||  |||| ||||||||||| |  || || |||| |||
Sbjct: 1877 gtggcacgcgtgcacgacgccgcggcccatggtgtactcgcacgtccccagcccctccac 1818

                                                                        
Query: 310  gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369
            |||||  || |||||||| ||||||||||| ||||| |||||||| || |||||||| ||
Sbjct: 1817 gtcctccggcagcctcatcgcggcgagcttcccgtacgtgcagtcccgccggaacccgat 1758

                                                                        
Query: 370  gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429
            |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1757 gatcggcggcaccacgaactggtggaagtgcgtccccgccggcgcccaccgctgctccct 1698

                                                                        
Query: 430  cggcgacagccacttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggt 489
            ||||||||||||||| ||||||| |||||||||||| ||||| || ||||||||||||||
Sbjct: 1697 cggcgacagccacttccccacgatccacgtcttgcaattctgtgcagcctggtacttggt 1638

                                                                        
Query: 490  gacctgcacgaggtactgctggaactccgccggcgcctccctctggatcttcaggaacct 549
            |||||| || || ||||||||||||||||| || ||||||||||| || |||| ||||||
Sbjct: 1637 gacctggaccagatactgctggaactccgcaggggcctccctctgaatattcatgaacct 1578

                                                                        
Query: 550  ctccgacgacatcgtcagcatgatgactctgatccttttccggcagaggtagagggcgat 609
            |||||  ||||  |||||||| | |||||||||| | ||||  ||||||||||| |||||
Sbjct: 1577 ctccgttgacagtgtcagcatcaagactctgatcttcttcctacagaggtagagagcgat 1518

                   
Query: 610  ggctctg 616
            |||||||
Sbjct: 1517 ggctctg 1511



to top

>gb|U57338.1|OSU57338 Oryza sativa glossy1 homolog mRNA, partial cds
          Length = 1903

 Score =  450 bits (227), Expect = e-123
 Identities = 422/487 (86%)
 Strand = Plus / Minus

                                                                        
Query: 130  tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189
            |||| ||||||| ||||||||| ||||||| || ||||| ||| ||||||||||||||||
Sbjct: 1668 tcacgccggcgtgaggccgtgcctgagcgcggcgttccagacggcgtcgatccggtcgac 1609

                                                                        
Query: 190  gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249
            |||||  ||||| ||||||||||| | ||| ||||||||||| || || || ||||||||
Sbjct: 1608 gtcgatggcgccgacctcgtggtggtcccacccctccaggaagtggacgacgccgccggc 1549

                                                                        
Query: 250  gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309
            ||||||||||||||| || || ||  |||| ||||||||||| |  || || |||| |||
Sbjct: 1548 gtggcacgcgtgcacgacgccgcggcccatggtgtactcgcacgtccccagcccctccac 1489

                                                                        
Query: 310  gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369
            |||||  || |||||||| ||||||||||| ||||| |||||||| || |||||||| ||
Sbjct: 1488 gtcctccggcagcctcatcgcggcgagcttcccgtacgtgcagtcccgccggaacccgat 1429

                                                                        
Query: 370  gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429
            |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1428 gatcggcggcaccacgaactggtggaagtgcgtccccgccggcgcccaccgctgctccct 1369

                                                                        
Query: 430  cggcgacagccacttgcccacgagccacgtcttgcagttctgcgcggcctggtacttggt 489
            ||||||||||||||| ||||||| |||||||||||| ||||| || ||||||||||||||
Sbjct: 1368 cggcgacagccacttccccacgatccacgtcttgcaattctgtgcagcctggtacttggt 1309

                                                                        
Query: 490  gacctgcacgaggtactgctggaactccgccggcgcctccctctggatcttcaggaacct 549
            |||||| || || ||||||||||||||||| || ||||||||||| || |||| ||||||
Sbjct: 1308 gacctggaccagatactgctggaactccgcaggggcctccctctgaatattcatgaacct 1249

                                                                        
Query: 550  ctccgacgacatcgtcagcatgatgactctgatccttttccggcagaggtagagggcgat 609
            |||||  ||||  |||||||| | |||||||||| | ||||  |||| |||||| |||||
Sbjct: 1248 ctccgttgacagtgtcagcatcaagactctgatcttcttcctacagaagtagagagcgat 1189

                   
Query: 610  ggctctg 616
            |||||||
Sbjct: 1188 ggctctg 1182



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  335 bits (169), Expect = 1e-88
 Identities = 253/281 (90%)
 Strand = Plus / Minus

                                                                            
Query: 286      ctcgcaggagccgaggccctgcacgtccttggggagcctcatggcggcgagcttgccgta 345
                |||||||| |||||||||||| |||||||||||||| | |||||||||||||||||||||
Sbjct: 15442213 ctcgcaggcgccgaggccctggacgtccttggggaggcgcatggcggcgagcttgccgta 15442154

                                                                            
Query: 346      ggtgcagtcgcggcggaacccaatgatcggcggcacgacgaactggtggaagtgcgtccc 405
                |||||||||||||||||| || ||||| || || ||||||||||||||||||||||||||
Sbjct: 15442153 ggtgcagtcgcggcggaagccgatgattggggggacgacgaactggtggaagtgcgtccc 15442094

                                                                            
Query: 406      cggcggcgcccaccgctgctccctcggcgacagccacttgcccacgagccacgtcttgca 465
                |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 15442093 cggcggcgcccaacgctgctccctcggcgacagccacttgccgacgatccacgtcttgca 15442034

                                                                            
Query: 466      gttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgccggcgc 525
                || |||||| | |  ||||||||| |||||||| ||||||||||||  ||||| || |||
Sbjct: 15442033 gtgctgcgccgacctgtacttggtcacctgcaccaggtactgctggtgctccggcgtcgc 15441974

                                                         
Query: 526      ctccctctggatcttcaggaacctctccgacgacatcgtca 566
                ||||||||| |||||| |||| ||||||| ||||| |||||
Sbjct: 15441973 ctccctctgtatcttctggaatctctccgtcgacagcgtca 15441933



 Score =  153 bits (77), Expect = 8e-34
 Identities = 128/145 (88%)
 Strand = Plus / Minus

                                                                            
Query: 143      aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202
                ||||||||| |||||||||||| ||||||||||||||| ||||| |||||||  ||||||
Sbjct: 15442454 aggccgtgcctgagcgccgcctcccacacgacgtcgatgcggtccacgtcgatggcgccc 15442395

                                                                            
Query: 203      acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
                ||||||||||||    | ||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 15442394 acctcgtggtgcgtgtacccctccaggaagtgcaccacgcctccggcgtggcacgcgtgc 15442335

                                         
Query: 263      accacccctcgctccatcgtgtact 287
                |||||||| ||||||| || |||||
Sbjct: 15442334 accaccccgcgctccagcgagtact 15442310



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 587      ttccggcagaggtagagggcgatggc 612
                |||| |||||||||||||||||||||
Sbjct: 15441812 ttcctgcagaggtagagggcgatggc 15441787



to top

>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1299_A11
          Length = 160099

 Score =  335 bits (169), Expect = 1e-88
 Identities = 253/281 (90%)
 Strand = Plus / Minus

                                                                         
Query: 286   ctcgcaggagccgaggccctgcacgtccttggggagcctcatggcggcgagcttgccgta 345
             |||||||| |||||||||||| |||||||||||||| | |||||||||||||||||||||
Sbjct: 91505 ctcgcaggcgccgaggccctggacgtccttggggaggcgcatggcggcgagcttgccgta 91446

                                                                         
Query: 346   ggtgcagtcgcggcggaacccaatgatcggcggcacgacgaactggtggaagtgcgtccc 405
             |||||||||||||||||| || ||||| || || ||||||||||||||||||||||||||
Sbjct: 91445 ggtgcagtcgcggcggaagccgatgattggggggacgacgaactggtggaagtgcgtccc 91386

                                                                         
Query: 406   cggcggcgcccaccgctgctccctcggcgacagccacttgcccacgagccacgtcttgca 465
             |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 91385 cggcggcgcccaacgctgctccctcggcgacagccacttgccgacgatccacgtcttgca 91326

                                                                         
Query: 466   gttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgccggcgc 525
             || |||||| | |  ||||||||| |||||||| ||||||||||||  ||||| || |||
Sbjct: 91325 gtgctgcgccgacctgtacttggtcacctgcaccaggtactgctggtgctccggcgtcgc 91266

                                                      
Query: 526   ctccctctggatcttcaggaacctctccgacgacatcgtca 566
             ||||||||| |||||| |||| ||||||| ||||| |||||
Sbjct: 91265 ctccctctgtatcttctggaatctctccgtcgacagcgtca 91225



 Score =  153 bits (77), Expect = 8e-34
 Identities = 128/145 (88%)
 Strand = Plus / Minus

                                                                         
Query: 143   aggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgacgtcgagcgcgccc 202
             ||||||||| |||||||||||| ||||||||||||||| ||||| |||||||  ||||||
Sbjct: 91746 aggccgtgcctgagcgccgcctcccacacgacgtcgatgcggtccacgtcgatggcgccc 91687

                                                                         
Query: 203   acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
             ||||||||||||    | ||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 91686 acctcgtggtgcgtgtacccctccaggaagtgcaccacgcctccggcgtggcacgcgtgc 91627

                                      
Query: 263   accacccctcgctccatcgtgtact 287
             |||||||| ||||||| || |||||
Sbjct: 91626 accaccccgcgctccagcgagtact 91602



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 587   ttccggcagaggtagagggcgatggc 612
             |||| |||||||||||||||||||||
Sbjct: 91104 ttcctgcagaggtagagggcgatggc 91079



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  325 bits (164), Expect = 1e-85
 Identities = 290/332 (87%)
 Strand = Plus / Minus

                                                                            
Query: 130      tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189
                |||| ||||||| ||||||||| ||||||| || ||||| ||| ||||||||||||||||
Sbjct: 26360228 tcacgccggcgtgaggccgtgcctgagcgcggcgttccagacggcgtcgatccggtcgac 26360169

                                                                            
Query: 190      gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249
                |||||  ||||| ||||||||||| | ||| ||||||||||| || || || ||||||||
Sbjct: 26360168 gtcgatggcgccgacctcgtggtggtcccacccctccaggaagtggacgacgccgccggc 26360109

                                                                            
Query: 250      gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309
                ||||||||||||||| || || ||  |||| ||||||||||| |  || || |||| |||
Sbjct: 26360108 gtggcacgcgtgcacgacgccgcggcccatggtgtactcgcacgtccccagcccctccac 26360049

                                                                            
Query: 310      gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369
                |||||  || |||||||| ||||||||||| ||||| |||||||| || |||||||| ||
Sbjct: 26360048 gtcctccggcagcctcatcgcggcgagcttcccgtacgtgcagtcccgccggaacccgat 26359989

                                                                            
Query: 370      gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429
                |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 26359988 gatcggcggcaccacgaactggtggaagtgcgtccccgccggcgcccaccgctgctccct 26359929

                                                
Query: 430      cggcgacagccacttgcccacgagccacgtct 461
                ||||||||||||||| ||||||| ||||||||
Sbjct: 26359928 cggcgacagccacttccccacgatccacgtct 26359897



 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                            
Query: 460      cttgcagttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgc 519
                |||||| ||||| || |||||||||||||||||||| || || |||||||||||||||||
Sbjct: 26359812 cttgcaattctgtgcagcctggtacttggtgacctggaccagatactgctggaactccgc 26359753

                                                   
Query: 520      cggcgcctccctctggatcttcaggaacctctccg 554
                 || ||||||||||| || |||| |||||||||||
Sbjct: 26359752 aggggcctccctctgaatattcatgaacctctccg 26359718



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                           
Query: 574      gactctgatccttttccggcagaggtagagggcgatggctctg 616
                |||||||||| | ||||  ||||||||||| ||||||||||||
Sbjct: 26359618 gactctgatcttcttcctacagaggtagagagcgatggctctg 26359576



to top

>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0085J13
          Length = 130185

 Score =  325 bits (164), Expect = 1e-85
 Identities = 290/332 (87%)
 Strand = Plus / Minus

                                                                         
Query: 130   tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189
             |||| ||||||| ||||||||| ||||||| || ||||| ||| ||||||||||||||||
Sbjct: 57955 tcacgccggcgtgaggccgtgcctgagcgcggcgttccagacggcgtcgatccggtcgac 57896

                                                                         
Query: 190   gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249
             |||||  ||||| ||||||||||| | ||| ||||||||||| || || || ||||||||
Sbjct: 57895 gtcgatggcgccgacctcgtggtggtcccacccctccaggaagtggacgacgccgccggc 57836

                                                                         
Query: 250   gtggcacgcgtgcaccacccctcgctccatcgtgtactcgcaggagccgaggccctgcac 309
             ||||||||||||||| || || ||  |||| ||||||||||| |  || || |||| |||
Sbjct: 57835 gtggcacgcgtgcacgacgccgcggcccatggtgtactcgcacgtccccagcccctccac 57776

                                                                         
Query: 310   gtccttggggagcctcatggcggcgagcttgccgtaggtgcagtcgcggcggaacccaat 369
             |||||  || |||||||| ||||||||||| ||||| |||||||| || |||||||| ||
Sbjct: 57775 gtcctccggcagcctcatcgcggcgagcttcccgtacgtgcagtcccgccggaacccgat 57716

                                                                         
Query: 370   gatcggcggcacgacgaactggtggaagtgcgtccccggcggcgcccaccgctgctccct 429
             |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 57715 gatcggcggcaccacgaactggtggaagtgcgtccccgccggcgcccaccgctgctccct 57656

                                             
Query: 430   cggcgacagccacttgcccacgagccacgtct 461
             ||||||||||||||| ||||||| ||||||||
Sbjct: 57655 cggcgacagccacttccccacgatccacgtct 57624



 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                         
Query: 460   cttgcagttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgc 519
             |||||| ||||| || |||||||||||||||||||| || || |||||||||||||||||
Sbjct: 57539 cttgcaattctgtgcagcctggtacttggtgacctggaccagatactgctggaactccgc 57480

                                                
Query: 520   cggcgcctccctctggatcttcaggaacctctccg 554
              || ||||||||||| || |||| |||||||||||
Sbjct: 57479 aggggcctccctctgaatattcatgaacctctccg 57445



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 574   gactctgatccttttccggcagaggtagagggcgatggctctg 616
             |||||||||| | ||||  ||||||||||| ||||||||||||
Sbjct: 57345 gactctgatcttcttcctacagaggtagagagcgatggctctg 57303



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  262 bits (132), Expect = 1e-66
 Identities = 165/176 (93%)
 Strand = Plus / Plus

                                                                           
Query: 286     ctcgcaggagccgaggccctgcacgtccttggggagcctcatggcggcgagcttgccgta 345
               ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4355574 ctcgcagtagccgaggccctggacgtccttggggagcctcatggcggcgagcttgccgta 4355633

                                                                           
Query: 346     ggtgcagtcgcggcggaacccaatgatcggcggcacgacgaactggtggaagtgcgtccc 405
               ||||||||| || |||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 4355634 ggtgcagtctcgccggaacccgatgatcggcggcaccacgaactggtggaagtgtgtccc 4355693

                                                                       
Query: 406     cggcggcgcccaccgctgctccctcggcgacagccacttgcccacgagccacgtct 461
               || ||||||||||| |||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 4355694 cgccggcgcccacctctgctccctcggcgacagccacttccccaccagccacgtct 4355749



 Score =  218 bits (110), Expect = 2e-53
 Identities = 146/158 (92%)
 Strand = Plus / Plus

                                                                           
Query: 130     tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189
               |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4355207 tcacgccggcgtgaggccgtgcttgagcgccgccttccagacgacgtcgatccggtcgac 4355266

                                                                           
Query: 190     gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249
               |||||  ||||||||||||||||||| ||| || |||||||| |||||||| ||||||||
Sbjct: 4355267 gtcgatggcgcccacctcgtggtgctcccacccttccaggaagtgcaccacgccgccggc 4355326

                                                     
Query: 250     gtggcacgcgtgcaccacccctcgctccatcgtgtact 287
               ||||||||||||||||||||| || |||||||||||||
Sbjct: 4355327 gtggcacgcgtgcaccaccccgcgttccatcgtgtact 4355364



 Score =  129 bits (65), Expect = 1e-26
 Identities = 92/101 (91%)
 Strand = Plus / Plus

                                                                           
Query: 460     cttgcagttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgc 519
               ||||||||| || || | ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4356234 cttgcagttttgtgcaggctggtacttggtgacctgcacgaggtactgctggaactctgc 4356293

                                                        
Query: 520     cggcgcctccctctggatcttcaggaacctctccgacgaca 560
               ||| || |||||||| |||||||| ||||||||||||||||
Sbjct: 4356294 cggtgcttccctctgaatcttcagaaacctctccgacgaca 4356334



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                          
Query: 574     gactctgatccttttccggcagaggtagagggcgatggctctg 616
               |||||||||| |||| | |||||||||||||||||||||||||
Sbjct: 4356509 gactctgatcttttttctgcagaggtagagggcgatggctctg 4356551



to top

>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544B02
          Length = 156339

 Score =  262 bits (132), Expect = 1e-66
 Identities = 165/176 (93%)
 Strand = Plus / Plus

                                                                         
Query: 286   ctcgcaggagccgaggccctgcacgtccttggggagcctcatggcggcgagcttgccgta 345
             ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 39138 ctcgcagtagccgaggccctggacgtccttggggagcctcatggcggcgagcttgccgta 39197

                                                                         
Query: 346   ggtgcagtcgcggcggaacccaatgatcggcggcacgacgaactggtggaagtgcgtccc 405
             ||||||||| || |||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 39198 ggtgcagtctcgccggaacccgatgatcggcggcaccacgaactggtggaagtgtgtccc 39257

                                                                     
Query: 406   cggcggcgcccaccgctgctccctcggcgacagccacttgcccacgagccacgtct 461
             || ||||||||||| |||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 39258 cgccggcgcccacctctgctccctcggcgacagccacttccccaccagccacgtct 39313



 Score =  218 bits (110), Expect = 2e-53
 Identities = 146/158 (92%)
 Strand = Plus / Plus

                                                                         
Query: 130   tcacaccggcgtcaggccgtgcttgagcgccgccttccacacgacgtcgatccggtcgac 189
             |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 38771 tcacgccggcgtgaggccgtgcttgagcgccgccttccagacgacgtcgatccggtcgac 38830

                                                                         
Query: 190   gtcgagcgcgcccacctcgtggtgctgccaaccctccaggaaatgcaccactccgccggc 249
             |||||  ||||||||||||||||||| ||| || |||||||| |||||||| ||||||||
Sbjct: 38831 gtcgatggcgcccacctcgtggtgctcccacccttccaggaagtgcaccacgccgccggc 38890

                                                   
Query: 250   gtggcacgcgtgcaccacccctcgctccatcgtgtact 287
             ||||||||||||||||||||| || |||||||||||||
Sbjct: 38891 gtggcacgcgtgcaccaccccgcgttccatcgtgtact 38928



 Score =  129 bits (65), Expect = 1e-26
 Identities = 92/101 (91%)
 Strand = Plus / Plus

                                                                         
Query: 460   cttgcagttctgcgcggcctggtacttggtgacctgcacgaggtactgctggaactccgc 519
             ||||||||| || || | ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 39798 cttgcagttttgtgcaggctggtacttggtgacctgcacgaggtactgctggaactctgc 39857

                                                      
Query: 520   cggcgcctccctctggatcttcaggaacctctccgacgaca 560
             ||| || |||||||| |||||||| ||||||||||||||||
Sbjct: 39858 cggtgcttccctctgaatcttcagaaacctctccgacgaca 39898



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                        
Query: 574   gactctgatccttttccggcagaggtagagggcgatggctctg 616
             |||||||||| |||| | |||||||||||||||||||||||||
Sbjct: 40073 gactctgatcttttttctgcagaggtagagggcgatggctctg 40115



to top

>ref|NM_125164.2| Arabidopsis thaliana WAX2; catalytic AT5G57800 (WAX2) mRNA, complete
            cds
          Length = 2499

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 203  acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
            ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || 
Sbjct: 2191 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 2132

                                         
Query: 263  accacccctcgctccatcgtgtactcgca 291
            |||||||||| ||||||||||||||||||
Sbjct: 2131 accacccctctctccatcgtgtactcgca 2103



to top

>gb|AY131334.1| Arabidopsis thaliana cuticle protein (WAX2) mRNA, complete cds
          Length = 2500

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 203  acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
            ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || 
Sbjct: 2187 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 2128

                                         
Query: 263  accacccctcgctccatcgtgtactcgca 291
            |||||||||| ||||||||||||||||||
Sbjct: 2127 accacccctctctccatcgtgtactcgca 2099



to top

>gb|AY042825.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 766

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                       
Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
           ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || 
Sbjct: 486 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 427

                                        
Query: 263 accacccctcgctccatcgtgtactcgca 291
           |||||||||| ||||||||||||||||||
Sbjct: 426 accacccctctctccatcgtgtactcgca 398



to top

>emb|BX833245.1|CNS09Z7G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL40ZC12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1259

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                       
Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
           ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || 
Sbjct: 990 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 931

                                        
Query: 263 accacccctcgctccatcgtgtactcgca 291
           |||||||||| ||||||||||||||||||
Sbjct: 930 accacccctctctccatcgtgtactcgca 902



to top

>dbj|AB099512.1| Arabidopsis thaliana FLP1 mRNA for faceless pollen-1, complete cds
          Length = 2473

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 203  acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
            ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || 
Sbjct: 2188 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 2129

                                         
Query: 263  accacccctcgctccatcgtgtactcgca 291
            |||||||||| ||||||||||||||||||
Sbjct: 2128 accacccctctctccatcgtgtactcgca 2100



to top

>dbj|AB116548.1| Arabidopsis thaliana YRE mRNA for YORE-YORE protein, complete cds
          Length = 2182

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                        
Query: 203  acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
            ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || 
Sbjct: 1897 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 1838

                                         
Query: 263  accacccctcgctccatcgtgtactcgca 291
            |||||||||| ||||||||||||||||||
Sbjct: 1837 accacccctctctccatcgtgtactcgca 1809



to top

>gb|BT002119.1| Arabidopsis thaliana Unknown protein (At5g57800) mRNA, complete cds
          Length = 514

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                       
Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
           ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || 
Sbjct: 368 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 309

                                        
Query: 263 accacccctcgctccatcgtgtactcgca 291
           |||||||||| ||||||||||||||||||
Sbjct: 308 accacccctctctccatcgtgtactcgca 280



to top

>dbj|AB013396.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTI20
          Length = 79676

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                         
Query: 203   acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
             ||||| || |||| ||||||||| || | ||| |||||||| || || |||||||| || 
Sbjct: 20507 acctcatgatgcttccaaccctcaagcatatgaaccactcctcctgcatggcacgcatgt 20448

                                      
Query: 263   accacccctcgctccatcgtgtact 287
             |||||||||| ||||||||||||||
Sbjct: 20447 accacccctctctccatcgtgtact 20423



to top

>dbj|AP004511.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT17H19, TM0041,
             complete sequence
          Length = 108987

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                              
Query: 239   actccgccggcgtggcacgcgtgcaccacccctcgctccatcgtgtact 287
             ||||| ||||||||||||||||| ||||| |||| ||||||||||||||
Sbjct: 51036 actcctccggcgtggcacgcgtgaaccactcctctctccatcgtgtact 51084



to top

>emb|BX833619.1|CNS09Z2C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL66ZD01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 520

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Minus

                                                                       
Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
           ||||| || |||| ||||||||| || | ||| |||||||| ||  | |||||| | || 
Sbjct: 252 acctcatgctgcttccaaccctcaagcatatgaaccactcctccttcatggcactcatgt 193

                                     
Query: 263 accacccctcgctccatcgtgtactc 288
           |||||||||| |||||||||||||||
Sbjct: 192 accacccctctctccatcgtgtactc 167



to top

>emb|BX833262.1|CNS09Z1Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL41ZF09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 944

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                       
Query: 203 acctcgtggtgctgccaaccctccaggaaatgcaccactccgccggcgtggcacgcgtgc 262
           ||||| || |||| ||||||||| || | ||  |||||||| || || |||||||| || 
Sbjct: 662 acctcatgatgcttccaaccctcaagcatattaaccactcctcctgcatggcacgcatgt 603

                                        
Query: 263 accacccctcgctccatcgtgtactcgca 291
            ||||||||| ||||||||||||| ||||
Sbjct: 602 cccacccctctctccatcgtgtacccgca 574



to top

>ref|XM_747887.1| Aspergillus fumigatus Af293 copper-transporting ATPase (Afu1g16130)
           partial mRNA
          Length = 3357

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 466 gttctgcgcggcctggtacttggtgac 492
           ||||||||||||||||| |||||||||
Sbjct: 615 gttctgcgcggcctggtccttggtgac 589



to top

>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 518     gccggcgcctccctctggatcttcaggaacctc 550
               |||| |||| ||||| |||||||||||||||||
Sbjct: 1523162 gccgacgccaccctcaggatcttcaggaacctc 1523194



to top

>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12
          Length = 333800

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   ccggtcgacgtcgagcgcgcc 201
             |||||||||||||||||||||
Sbjct: 78053 ccggtcgacgtcgagcgcgcc 78073



to top

>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 6      gtattagtggtacatttgacatgaatgga 34
              |||||||||| |||| |||||||||||||
Sbjct: 978039 gtattagtggaacatatgacatgaatgga 978067



to top

>emb|CR936790.1| Homo sapiens mRNA; cDNA DKFZp686F14110 (from clone DKFZp686F14110)
          Length = 5397

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 524 gcctccctctggatcttcagg 544
           |||||||||||||||||||||
Sbjct: 421 gcctccctctggatcttcagg 441



to top

>gb|AC016628.6| Homo sapiens chromosome 19 clone LLNL-R_266C8, complete sequence
          Length = 41153

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 524   gcctccctctggatcttcagg 544
             |||||||||||||||||||||
Sbjct: 16049 gcctccctctggatcttcagg 16029



to top

>gb|AC018710.4|AC018710 Homo sapiens BAC clone RP11-296L20 from 4, complete sequence
          Length = 197236

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 524   gcctccctctggatcttcagg 544
             |||||||||||||||||||||
Sbjct: 64888 gcctccctctggatcttcagg 64868



to top

>gb|AC010300.8| Homo sapiens chromosome 19 clone CTB-176F20, complete sequence
          Length = 73684

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 524   gcctccctctggatcttcagg 544
             |||||||||||||||||||||
Sbjct: 59897 gcctccctctggatcttcagg 59877



to top

>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence
          Length = 218156

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     atgggggatggaggagggag 73
              ||||||||||||||||||||
Sbjct: 143374 atgggggatggaggagggag 143393



to top

>ref|XM_470828.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1014

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 324 tcatggcggcgagcttgccg 343
           ||||||||||||||||||||
Sbjct: 205 tcatggcggcgagcttgccg 186



to top

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 140     gtcaggccgtgcttgagcgc 159
               ||||||||||||||||||||
Sbjct: 4805622 gtcaggccgtgcttgagcgc 4805641



to top

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     cgacgtcgatccggtcgacg 190
               ||||||||||||||||||||
Sbjct: 2378164 cgacgtcgatccggtcgacg 2378145



to top

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   ggcgagcttgccgtaggtgc 350
             ||||||||||||||||||||
Sbjct: 69622 ggcgagcttgccgtaggtgc 69641



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 324      tcatggcggcgagcttgccg 343
                ||||||||||||||||||||
Sbjct: 15622326 tcatggcggcgagcttgccg 15622345



to top

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 171     cgacgtcgatccggtcgacg 190
               ||||||||||||||||||||
Sbjct: 2006401 cgacgtcgatccggtcgacg 2006420



to top

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 141     tcaggccgtgcttgagcgcc 160
               ||||||||||||||||||||
Sbjct: 5200163 tcaggccgtgcttgagcgcc 5200182



to top

>tpg|BK003353.1| TPA: TPA_inf: Drosophila melanogaster HDC01525 (HDC01525) gene,
            complete cds
          Length = 2178

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    ttagtggtacatttgacatg 28
            ||||||||||||||||||||
Sbjct: 1074 ttagtggtacatttgacatg 1093



to top

>gb|AC097356.2| Homo sapiens chromosome 3 clone RP11-107K23, complete sequence
          Length = 147267

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 597   ggtagagggcgatggctctg 616
             ||||||||||||||||||||
Sbjct: 69747 ggtagagggcgatggctctg 69766



to top

>gb|AC093045.1| Drosophila melanogaster, chromosome 2L, region 29E-29E, BAC clone
             BACR01O16, complete sequence
          Length = 189904

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ttagtggtacatttgacatg 28
             ||||||||||||||||||||
Sbjct: 74043 ttagtggtacatttgacatg 74062



to top

>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete
             sequence
          Length = 178748

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   tcatggcggcgagcttgccg 343
             ||||||||||||||||||||
Sbjct: 32280 tcatggcggcgagcttgccg 32299



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 324      tcatggcggcgagcttgccg 343
                ||||||||||||||||||||
Sbjct: 15616860 tcatggcggcgagcttgccg 15616879



to top

>gb|AC022846.9| Homo sapiens chromosome 8, clone RP11-253N21, complete sequence
          Length = 123570

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    gtgctgccaaccctccagga 230
              ||||||||||||||||||||
Sbjct: 119774 gtgctgccaaccctccagga 119793



to top

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 490     gacctgcacgaggtactgctggaactcc 517
               ||||||||||| | ||||||||||||||
Sbjct: 2786201 gacctgcacgaagcactgctggaactcc 2786228



to top

>gb|AE004577.1| Pseudomonas aeruginosa PAO1, section 138 of 529 of the complete
            genome
          Length = 13737

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 334  gagcttgccgtaggtgcagt 353
            ||||||||||||||||||||
Sbjct: 8509 gagcttgccgtaggtgcagt 8490



to top

>gb|AC022910.9| Homo sapiens chromosome 8, clone RP11-710C11, complete sequence
          Length = 181944

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   gtgctgccaaccctccagga 230
             ||||||||||||||||||||
Sbjct: 29713 gtgctgccaaccctccagga 29732



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 189     cgtcgagcgcgcccacctcg 208
               ||||||||||||||||||||
Sbjct: 3462199 cgtcgagcgcgcccacctcg 3462218



to top

>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 380     acgacgaactggtggaagtg 399
               ||||||||||||||||||||
Sbjct: 1638230 acgacgaactggtggaagtg 1638211



to top

>emb|CR936382.9| Zebrafish DNA sequence from clone CH211-220F20 in linkage group 18,
             complete sequence
          Length = 78500

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    ggagtggagtacaatacaat 51
             ||||||||||||||||||||
Sbjct: 68241 ggagtggagtacaatacaat 68260



to top

>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 176    tcgatccggtcgacgtcgagcgcg 199
              |||| |||||||||||||||||||
Sbjct: 887253 tcgagccggtcgacgtcgagcgcg 887276



to top

>gb|AE003622.4| Drosophila melanogaster chromosome 2L, section 31 of 83 of the complete
              sequence
          Length = 262557

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      ttagtggtacatttgacatg 28
              ||||||||||||||||||||
Sbjct: 163638 ttagtggtacatttgacatg 163657



to top

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 154   gagcgccgccttccacacgacgtcgatccggtcgacgtcg 193
             ||||| |||||  |||||| |||||||| |||||||||||
Sbjct: 50215 gagcgtcgcctcgcacacggcgtcgatcaggtcgacgtcg 50254



to top

>gb|AC005416.1|AC005416 Drosophila melanogaster DNA sequence (P1 DS00901 (D289)), complete
             sequence
          Length = 57336

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ttagtggtacatttgacatg 28
             ||||||||||||||||||||
Sbjct: 33741 ttagtggtacatttgacatg 33722



to top

>gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, complete sequence
          Length = 209693

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    atgggggatggaggagggag 73
             ||||||||||||||||||||
Sbjct: 40386 atgggggatggaggagggag 40367


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,718,330
Number of Sequences: 3902068
Number of extensions: 3718330
Number of successful extensions: 78875
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77390
Number of HSP's gapped (non-prelim): 1476
length of query: 616
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 593
effective length of database: 17,143,297,704
effective search space: 10165975538472
effective search space used: 10165975538472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top