ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20g23 |
|---|---|
| Clone Library Name | barley_pub |
>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)| Length = 1992 Score = 102 bits (255), Expect = 5e-22 Identities = 58/108 (53%), Positives = 65/108 (60%) Frame = -3 Query: 527 AIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXX 348 A+ L EI++ F EQQ F QFVTG+PRLP GG SLNP LTIVRK Sbjct: 1895 AVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRK----------TFE 1944 Query: 347 XXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 204 LPSVMTC NYLKLP YS+ E+M +KLL A EGQ SF LS Sbjct: 1945 STENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS 1992
>UFD4_YEAST (P33202) Ubiquitin fusion degradation protein 4 (UB fusion protein 4)| Length = 1483 Score = 92.8 bits (229), Expect = 5e-19 Identities = 48/107 (44%), Positives = 64/107 (59%) Frame = -3 Query: 524 IVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXX 345 I + + I++ F ++ F QF+TG+P+LP GG SLNPK T+V KH Sbjct: 1387 IHDFISIISAFGKHERRLFLQFLTGSPKLPIGGFKSLNPKFTVVLKHAEDGLTADEY--- 1443 Query: 344 XXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 204 LPSVMTCANYLKLP Y++K++M +L AI EG G+F LS Sbjct: 1444 -------LPSVMTCANYLKLPKYTSKDIMRSRLCQAIEEGAGAFLLS 1483
>YDE1_SCHPO (Q10435) Probable ubiquitin fusion degradation protein C12B10.01c| Length = 1647 Score = 91.3 bits (225), Expect = 2e-18 Identities = 51/109 (46%), Positives = 64/109 (58%) Frame = -3 Query: 530 PAIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXX 351 P I LL +M++ ++Q F QF+TG+ +LP GG A LNP LT+VR+ Sbjct: 1549 PTIQRLLTLMSQMNFQEQRDFLQFITGSRKLPIGGFAGLNPPLTVVRR----------LN 1598 Query: 350 XXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 204 LPSVMTC NYLKLP YS+ EV+ +L AI EGQGSF LS Sbjct: 1599 EPPYVPDDYLPSVMTCVNYLKLPEYSSSEVLGSRLSKAILEGQGSFHLS 1647
>HECD1_HUMAN (Q9ULT8) E3 ubiquitin-protein ligase HECTD1 (HECT domain-containing| protein 1) (E3 ligase for inhibin receptor) (EULIR) Length = 2612 Score = 77.4 bits (189), Expect = 2e-14 Identities = 39/101 (38%), Positives = 57/101 (56%) Frame = -3 Query: 530 PAIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXX 351 P + + ++ + +++ AF QF TG LPPGGLA+L+P+LT+VRK Sbjct: 2520 PGFLRFVRVLCGMSSDERKAFLQFTTGCSTLPPGGLANLHPRLTVVRK------------ 2567 Query: 350 XXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINE 228 PSV TC +YLKLP YS++E+M ++LL A E Sbjct: 2568 --VDATDASYPSVNTCVHYLKLPEYSSEEIMRERLLAATME 2606
>HUL5_YEAST (P53119) Probable ubiquitin-protein ligase HUL5 (EC 6.3.2.-)| Length = 910 Score = 66.2 bits (160), Expect = 5e-11 Identities = 40/107 (37%), Positives = 53/107 (49%) Frame = -3 Query: 524 IVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXX 345 IV+ E++ EF E++ F +FVT P+ P G +L+PK I Sbjct: 820 IVDFWEVLNEFKFEEKLNFLKFVTSVPQAPLQGFKALDPKFGI---------------RN 864 Query: 344 XXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 204 LP+ TC N LKLP Y K ++ +KLLYAIN G FDLS Sbjct: 865 AGTEKYRLPTASTCVNLLKLPDYRNKTILREKLLYAINSG-ARFDLS 910
>K0317_MOUSE (Q8CHG5) Protein KIAA0317| Length = 823 Score = 55.5 bits (132), Expect = 9e-08 Identities = 32/100 (32%), Positives = 46/100 (46%) Frame = -3 Query: 506 IMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXX 327 +++ T E+ QF TG+ +LPPGG A+L P I+ Sbjct: 739 VVSSLTQEELARLLQFTTGSSQLPPGGFAALCPSFQII----------------AAPTHS 782 Query: 326 DLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDL 207 LP+ TC N L LP Y + E +H+ L AI+EG F + Sbjct: 783 TLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFGM 822
>K0317_HUMAN (O15033) Protein KIAA0317| Length = 823 Score = 55.5 bits (132), Expect = 9e-08 Identities = 32/100 (32%), Positives = 46/100 (46%) Frame = -3 Query: 506 IMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXX 327 +++ T E+ QF TG+ +LPPGG A+L P I+ Sbjct: 739 VVSSLTQEELARLLQFTTGSSQLPPGGFAALCPSFQII----------------AAPTHS 782 Query: 326 DLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDL 207 LP+ TC N L LP Y + E +H+ L AI+EG F + Sbjct: 783 TLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFGM 822
>UBE3A_HUMAN (Q05086) Ubiquitin-protein ligase E3A (EC 6.3.2.-) (E6AP| ubiquitin-protein ligase) (Oncogenic protein-associated protein E6-AP) (Human papillomavirus E6-associated protein) (NY-REN-54 antigen) Length = 875 Score = 54.7 bits (130), Expect = 2e-07 Identities = 36/97 (37%), Positives = 46/97 (47%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 330 EI+ FT EQ+ F QF TG R P GGL L K+ I + Sbjct: 792 EIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKL--KMIIAKN---------------GPDT 834 Query: 329 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP+ TC N L LP YS+KE + ++LL AI +G Sbjct: 835 ERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKG 871
>UBE3A_MOUSE (O08759) Ubiquitin-protein ligase E3A (EC 6.3.2.-) (Oncogenic| protein-associated protein E6-AP) Length = 885 Score = 51.6 bits (122), Expect = 1e-06 Identities = 35/97 (36%), Positives = 45/97 (46%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 330 EI+ FT EQ+ F F TG R P GGL L K+ I + Sbjct: 802 EIVHSFTDEQKRLFLLFTTGTDRAPVGGLGKL--KMIIAKN---------------GPDT 844 Query: 329 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP+ TC N L LP YS+KE ++ +LL AI +G Sbjct: 845 ERLPTSHTCFNVLLLPEYSSKEKLNVRLLKAITYAKG 881
>PUB2_SCHPO (Q9UTG2) E3 ubiquitin--protein ligase pub2 (EC 6.3.2.-)| Length = 671 Score = 51.6 bits (122), Expect = 1e-06 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 4/101 (3%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXXXXXXXXX 342 E+++E++PE++ QF TG RLP G ++ P+ + K Sbjct: 582 ELLSEWSPEKKAKLLQFATGTSRLPLSGFKDMHGSDGPRKFTIEK--------------- 626 Query: 341 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N L +PPY++KE + +KL AI E G Sbjct: 627 VGHISQLPKAHTCFNRLDIPPYNSKEELEQKLTIAIQETAG 667
>WWP2_HUMAN (O00308) NEDD4-like E3 ubiquitin-protein ligase WWP2 (EC 6.3.2.-) (WW| domain-containing protein 2) (Atrophin-1-interacting protein 2) (AIP2) Length = 870 Score = 51.6 bits (122), Expect = 1e-06 Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 4/101 (3%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXX 342 +++ E E++ QFVTG RLP GG A L P+ + K Sbjct: 781 QVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDK--------------- 825 Query: 341 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N L LPPY + E + +KLLYAI E +G Sbjct: 826 VGKETWLPRSHTCFNRLDLPPYKSYEQLREKLLYAIEETEG 866
>WWP2_MOUSE (Q9DBH0) NEDD4-like E3 ubiquitin-protein ligase WWP2 (EC 6.3.2.-) (WW| domain-containing protein 2) Length = 870 Score = 50.1 bits (118), Expect = 4e-06 Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 4/101 (3%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXX 342 +++ E E++ QFVTG RLP GG A L P+ + + Sbjct: 781 QVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDR--------------- 825 Query: 341 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N L LPPY + E + +KLLYAI E +G Sbjct: 826 VGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEG 866
>TOM1_YEAST (Q03280) E3 ubiquitin protein ligase TOM1 (EC 6.3.2.-)| (Temperature-dependent organization in mitotic nucleus protein 1) (Suppressor of snRNA protein 2) Length = 3268 Score = 49.3 bits (116), Expect = 7e-06 Identities = 31/97 (31%), Positives = 41/97 (42%) Frame = -3 Query: 494 FTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXXDLPS 315 F E++ QFVTG ++P G L+ + + LPS Sbjct: 3182 FDAEERAKLLQFVTGTSKVPLNGFKELSGVNGVCK----------FSIHRDFGSSERLPS 3231 Query: 314 VMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 204 TC N L LPPY + E + LL AINEG F L+ Sbjct: 3232 SHTCFNQLNLPPYESYETLRGSLLLAINEGHEGFGLA 3268
>ITCH_HUMAN (Q96J02) Itchy homolog E3 ubiquitin protein ligase (EC 6.3.2.-)| (Itch) (Atrophin-1-interacting protein 4) (AIP4) (NFE2-associated polypeptide 1) (NAPP1) Length = 903 Score = 49.3 bits (116), Expect = 7e-06 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 4/101 (3%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXX 342 + + E E++ QFVTG RLP GG A L P+ + K Sbjct: 814 QFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEK--------------- 858 Query: 341 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N L LPPY + E + +KLL+AI E +G Sbjct: 859 VGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 899
>ITCH_MOUSE (Q8C863) Itchy E3 ubiquitin protein ligase (EC 6.3.2.-)| Length = 864 Score = 49.3 bits (116), Expect = 7e-06 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 4/101 (3%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXX 342 + + E E++ QFVTG RLP GG A L P+ + K Sbjct: 775 QFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEK--------------- 819 Query: 341 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N L LPPY + E + +KLL+AI E +G Sbjct: 820 VGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 860
>UPL1_ARATH (Q8GY23) E3 ubiquitin protein ligase UPL1 (EC 6.3.2.-)| (Ubiquitin-protein ligase 1) Length = 3684 Score = 48.9 bits (115), Expect = 9e-06 Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Frame = -3 Query: 530 PAIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXX 363 P I E++ F+ E F QFVTG ++P G +L P+ + K Sbjct: 3583 PVIHWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHK-------- 3634 Query: 362 XXXXXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSF 213 LPS TC N L LP Y +KE + ++LL AI+E F Sbjct: 3635 ------AYGAPERLPSAHTCFNQLDLPEYQSKEQLQERLLLAIHEASEGF 3678
>UPL2_ARATH (Q8H0T4) E3 ubiquitin protein ligase UPL2 (EC 6.3.2.-)| (Ubiquitin-protein ligase 2) Length = 3658 Score = 48.5 bits (114), Expect = 1e-05 Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Frame = -3 Query: 530 PAIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXX 363 P I E++ F+ E F QFVTG ++P G +L P+ + K Sbjct: 3560 PVIRWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHK-------- 3611 Query: 362 XXXXXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSF 213 LPS TC N L LP Y +KE + ++LL AI+E F Sbjct: 3612 ------AYGSPERLPSAHTCFNQLDLPEYQSKEQVQERLLLAIHEANEGF 3655
>WWP1_HUMAN (Q9H0M0) NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 6.3.2.-) (WW| domain-containing protein 1) (Atropin-1-interacting protein 5) (AIP5) Length = 922 Score = 47.8 bits (112), Expect = 2e-05 Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 4/106 (3%) Frame = -3 Query: 524 IVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXX 357 I+ + + E E + QFVTG RLP GG A L P+ + K Sbjct: 828 IIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEK---------- 877 Query: 356 XXXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N L LPPY + E + +KLL+AI E +G Sbjct: 878 -----VGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 918
>WWP1_MOUSE (Q8BZZ3) NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 6.3.2.-) (WW| domain-containing protein 1) Length = 918 Score = 47.8 bits (112), Expect = 2e-05 Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 4/106 (3%) Frame = -3 Query: 524 IVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXX 357 I+ + + E E + QFVTG RLP GG A L P+ + K Sbjct: 824 IIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEK---------- 873 Query: 356 XXXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N L LPPY + E + +KLL+AI E +G Sbjct: 874 -----VGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEG 914
>HERC3_HUMAN (Q15034) HECT domain and RCC1-like domain protein 3| Length = 1050 Score = 46.2 bits (108), Expect = 6e-05 Identities = 30/104 (28%), Positives = 45/104 (43%) Frame = -3 Query: 530 PAIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXX 351 P + E EF E++ F F+TG+ R+P G+ASL + Sbjct: 960 PTVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQ---------------- 1003 Query: 350 XXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N L LP YS+KE++ +L A++ +G Sbjct: 1004 -STASGEEYLPVAHTCYNLLDLPKYSSKEILSARLTQALDNYEG 1046
>HUL4_YEAST (P40985) Probable ubiquitin-protein ligase HUL4 (EC 6.3.2.-) (HECT| ubiquitin ligase 4) Length = 892 Score = 45.8 bits (107), Expect = 7e-05 Identities = 29/97 (29%), Positives = 47/97 (48%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 330 EI+ + Q QFVT + R+P G++++ K++++ H Sbjct: 808 EIIESWDYPLQKKLLQFVTASDRIPATGISTIPFKISLLGSHDSDD-------------- 853 Query: 329 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N + L YS+K+ + KLL+AINE +G Sbjct: 854 --LPLAHTCFNEICLWNYSSKKKLELKLLWAINESEG 888
>HUL4_ASHGO (Q757T0) Probable ubiquitin-protein ligase HUL4 (EC 6.3.2.-) (HECT| ubiquitin ligase 4) Length = 839 Score = 45.8 bits (107), Expect = 7e-05 Identities = 29/104 (27%), Positives = 45/104 (43%) Frame = -3 Query: 530 PAIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXX 351 P + EI++E QQ FVTG+ R+P G+ ++ +++ +R Sbjct: 749 PVVQWFWEILSEMEYPQQRKLLHFVTGSDRVPATGVTTIPFRISRIR------------- 795 Query: 350 XXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N + L Y KE + KL+ A+ E QG Sbjct: 796 ----SGADRLPLSHTCFNEICLHEYKDKETLRNKLIIALEESQG 835
>NED4L_PONPY (Q5RBF2) E3 ubiquitin-protein ligase NEDD4-like protein (EC 6.3.2.-)| Length = 959 Score = 45.4 bits (106), Expect = 1e-04 Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 4/93 (4%) Frame = -3 Query: 485 EQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXXXXXXXDLP 318 E++ QFVTG R+P G A L P+L + + LP Sbjct: 877 EKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEK---------------LP 921 Query: 317 SVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 TC N L LPPY T E + +KLL A+ QG Sbjct: 922 RAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 954
>TOM1_ASHGO (Q756G2) Probable E3 ubiquitin protein ligase TOM1 (EC 6.3.2.-)| Length = 3258 Score = 45.4 bits (106), Expect = 1e-04 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 5/102 (4%) Frame = -3 Query: 494 FTPEQQHAFCQFVTGAPRLPPGGLASLN-----PKLTIVRKHXXXXXXXXXXXXXXXXXX 330 F E++ QFVTG ++P G L+ K +I R + Sbjct: 3172 FDKEERAKLLQFVTGTSKVPLNGFKELSGVNGISKFSIHRDYGSIDR------------- 3218 Query: 329 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 204 LPS TC N L LP Y + E + LL AINEG F ++ Sbjct: 3219 --LPSSHTCFNQLDLPAYDSYETLRGSLLLAINEGHEGFGIA 3258
>NED4L_HUMAN (Q96PU5) E3 ubiquitin-protein ligase NEDD4-like protein (EC 6.3.2.-)| (Nedd4-2) (NEDD4.2) Length = 975 Score = 45.4 bits (106), Expect = 1e-04 Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 4/93 (4%) Frame = -3 Query: 485 EQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXXXXXXXDLP 318 E++ QFVTG R+P G A L P+L + + LP Sbjct: 893 EKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEK---------------LP 937 Query: 317 SVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 TC N L LPPY T E + +KLL A+ QG Sbjct: 938 RAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 970
>NED4L_MOUSE (Q8CFI0) E3 ubiquitin-protein ligase NEDD4-like protein (EC 6.3.2.-)| (Nedd4-2) (NEDD4.2) Length = 1004 Score = 45.4 bits (106), Expect = 1e-04 Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 4/93 (4%) Frame = -3 Query: 485 EQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXXXXXXXDLP 318 E++ QFVTG R+P G A L P+L + + LP Sbjct: 922 EKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEK---------------LP 966 Query: 317 SVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 TC N L LPPY T E + +KLL A+ QG Sbjct: 967 RAHTCFNRLDLPPYETFEDLREKLLMAVENAQG 999
>PUB1_SCHPO (Q92462) E3 ubiquitin--protein ligase pub1 (EC 6.3.2.-)| Length = 767 Score = 44.7 bits (104), Expect = 2e-04 Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXXXXXXXXX 342 E+M E++ E++ QF TG R+P G L P+ + K Sbjct: 678 ELMDEWSNEKKSRLLQFTTGTSRIPVNGFKDLQGSDGPRKFTIEK--------------- 722 Query: 341 XXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N L LPPY++K+ + KL A+ E G Sbjct: 723 AGEPNKLPKAHTCFNRLDLPPYTSKKDLDHKLSIAVEETIG 763
>UBE3C_MOUSE (Q80U95) Ubiquitin-protein ligase E3C (EC 6.3.2.-)| Length = 1083 Score = 44.7 bits (104), Expect = 2e-04 Identities = 33/109 (30%), Positives = 44/109 (40%) Frame = -3 Query: 530 PAIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXX 351 P I ++ FT E++ +FVT R P G L P I Sbjct: 991 PVIKIFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCI--------------- 1035 Query: 350 XXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 204 LP+ TC N LKLP + + ++ KLLYAI E F+LS Sbjct: 1036 HNGGSDLERLPTASTCMNLLKLPEFYDEALLRSKLLYAI-ECAAGFELS 1083
>UBE3C_HUMAN (Q15386) Ubiquitin-protein ligase E3C (EC 6.3.2.-)| Length = 1083 Score = 44.7 bits (104), Expect = 2e-04 Identities = 33/109 (30%), Positives = 44/109 (40%) Frame = -3 Query: 530 PAIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXX 351 P I ++ FT E++ +FVT R P G L P I Sbjct: 991 PVIKVFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCI--------------- 1035 Query: 350 XXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 204 LP+ TC N LKLP + + ++ KLLYAI E F+LS Sbjct: 1036 HNGGSDLERLPTASTCMNLLKLPEFYDETLLRSKLLYAI-ECAAGFELS 1083
>SUDX_DROME (Q9Y0H4) E3 ubiquitin-protein ligase suppressor of deltex (EC| 6.3.2.-) Length = 949 Score = 44.3 bits (103), Expect = 2e-04 Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 4/106 (3%) Frame = -3 Query: 524 IVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXX 357 +V + + E E++ QFVTG R+P GG A L P+ + K Sbjct: 855 VVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEK---------- 904 Query: 356 XXXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N L LPPY + + + +KL +AI E +G Sbjct: 905 -----VGKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEETEG 945
>SMUF2_HUMAN (Q9HAU4) Smad ubiquitination regulatory factor 2 (EC 6.3.2.-)| (Ubiquitin--protein ligase SMURF2) (Smad-specific E3 ubiquitin ligase 2) (hSMURF2) Length = 748 Score = 43.1 bits (100), Expect = 5e-04 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 4/96 (4%) Frame = -3 Query: 494 FTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXXXXXXXXXXXXXX 327 F E++ QFVTG+ R+P G +L P+L + + Sbjct: 663 FDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQ--------------IDACTN 708 Query: 326 DLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 +LP TC N + +PPY + E +++KLL AI E G Sbjct: 709 NLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEETCG 744
>SMUF1_XENLA (Q9PUN2) Smad ubiquitination regulatory factor 1 (EC 6.3.2.-)| (Ubiquitin--protein ligase SMURF1) (Smad-specific E3 ubiquitin ligase) (xSMURF1) Length = 731 Score = 43.1 bits (100), Expect = 5e-04 Identities = 26/97 (26%), Positives = 41/97 (42%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 330 + + F E++ QFVTG+ R+P G +L Sbjct: 638 QAVESFDEERRARLLQFVTGSTRVPLQGFKALQGS-------TGAAGPRLFTIHLIDANT 690 Query: 329 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 +LP TC N + +PPY + E +++KLL A+ E G Sbjct: 691 DNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETSG 727
>PTR1_SCHPO (O13834) E3 ubiquitin protein ligase ptr1 (EC 6.3.2.-) (Poly(A)+ RNA| transport protein 1) Length = 3227 Score = 41.6 bits (96), Expect = 0.001 Identities = 29/94 (30%), Positives = 35/94 (37%) Frame = -3 Query: 494 FTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXXDLPS 315 F E++ QF TG ++P G L R + LP Sbjct: 3141 FDEEERAKLLQFATGTSKVPLNGFKELEGMSGFQRFNIHKSYGSLNR----------LPQ 3190 Query: 314 VMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSF 213 TC N L LP Y T E + LL AINEG F Sbjct: 3191 SHTCFNQLDLPEYDTYEQLRSMLLTAINEGSEGF 3224
>SMUF1_MOUSE (Q9CUN6) Smad ubiquitination regulatory factor 1 (EC 6.3.2.-)| (Ubiquitin--protein ligase SMURF1) (Smad-specific E3 ubiquitin ligase 1) Length = 731 Score = 41.6 bits (96), Expect = 0.001 Identities = 26/92 (28%), Positives = 39/92 (42%) Frame = -3 Query: 494 FTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXXDLPS 315 F E++ QFVTG+ R+P G +L +LP Sbjct: 643 FDEERRARLLQFVTGSTRVPLQGFKALQGS-------TGAAGPRLFTIHLIDANTDNLPK 695 Query: 314 VMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 TC N + +PPY + E +++KLL A+ E G Sbjct: 696 AHTCFNRIDIPPYESYEKLYEKLLTAVEETCG 727
>SMUF1_HUMAN (Q9HCE7) Smad ubiquitination regulatory factor 1 (EC 6.3.2.-)| (Ubiquitin--protein ligase SMURF1) (Smad-specific E3 ubiquitin ligase 1) (hSMURF1) Length = 757 Score = 41.6 bits (96), Expect = 0.001 Identities = 26/92 (28%), Positives = 39/92 (42%) Frame = -3 Query: 494 FTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXXDLPS 315 F E++ QFVTG+ R+P G +L +LP Sbjct: 669 FDEERRARLLQFVTGSTRVPLQGFKALQGS-------TGAAGPRLFTIHLIDANTDNLPK 721 Query: 314 VMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 TC N + +PPY + E +++KLL A+ E G Sbjct: 722 AHTCFNRIDIPPYESYEKLYEKLLTAVEETCG 753
>SMUF1_DROME (Q9V853) E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Smad| ubiquitination regulatory factor 1 homolog) (DSmurf) (Lethal with a checkpoint kinase protein) Length = 1061 Score = 41.6 bits (96), Expect = 0.001 Identities = 26/97 (26%), Positives = 40/97 (41%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 330 +++ ++ E + QFVTG+ R+P G +L V Sbjct: 967 QVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADVPTQN---- 1022 Query: 329 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N + LPPY T +++ KL A+ E G Sbjct: 1023 --LPKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCG 1057
>PUB3_SCHPO (O14326) E3 ubiquitin--protein ligase pub3 (EC 6.3.2.-)| Length = 786 Score = 41.6 bits (96), Expect = 0.001 Identities = 30/108 (27%), Positives = 41/108 (37%), Gaps = 4/108 (3%) Frame = -3 Query: 530 PAIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXX 363 P I EI+ + E + QF TG R+P G L P+ + K Sbjct: 690 PVIKWFWEIIAGWKNEDRSKLLQFATGTSRIPVNGFRDLQGSDGPRKFTIEK-------- 741 Query: 362 XXXXXXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N L LP Y +K+ +H+KL A+ G Sbjct: 742 -------AGTPDQLPVAHTCFNRLDLPDYPSKDTLHEKLSLAVENTVG 782
>HUWE1_HUMAN (Q7Z6Z7) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (Mcl-1 ubiquitin ligase E3) (Mule) (ARF-binding protein 1) (ARF-BP1) Length = 4374 Score = 40.4 bits (93), Expect = 0.003 Identities = 30/100 (30%), Positives = 39/100 (39%) Frame = -3 Query: 503 MTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXXD 324 + F + F QFVTG ++P G A+L I + Sbjct: 4285 LRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQK----------FQIHRDDRSTDR 4334 Query: 323 LPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 204 LPS TC N L LP Y + E + LL AI E F L+ Sbjct: 4335 LPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFGLA 4374
>HUWE1_RAT (P51593) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (Upstream regulatory element-binding protein 1) (Fragment) Length = 322 Score = 40.4 bits (93), Expect = 0.003 Identities = 30/100 (30%), Positives = 39/100 (39%) Frame = -3 Query: 503 MTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXXD 324 + F + F QFVTG ++P G A+L I + Sbjct: 233 LRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQK----------FQIHRDDRSTDR 282 Query: 323 LPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 204 LPS TC N L LP Y + E + LL AI E F L+ Sbjct: 283 LPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFGLA 322
>HUWE1_MOUSE (Q7TMY8) HECT, UBA and WWE domain-containing protein 1 (EC 6.3.2.-)| (E3 ubiquitin protein ligase URE-B1) (E3Histone) Length = 4377 Score = 40.4 bits (93), Expect = 0.003 Identities = 30/100 (30%), Positives = 39/100 (39%) Frame = -3 Query: 503 MTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXXD 324 + F + F QFVTG ++P G A+L I + Sbjct: 4288 LRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQK----------FQIHRDDRSTDR 4337 Query: 323 LPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSFDLS 204 LPS TC N L LP Y + E + LL AI E F L+ Sbjct: 4338 LPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFGLA 4377
>HERC2_DROME (Q9VR91) HECT domain and RCC1-like domain-containing protein 2| Length = 4912 Score = 40.0 bits (92), Expect = 0.004 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 3/96 (3%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPK---LTIVRKHXXXXXXXXXXXXXXX 339 E+M EFT +++ F +FV G RLP +A + L ++ K+ Sbjct: 4795 EVMEEFTNQERSLFLRFVWGRTRLPRT-IADFRGRDFVLQVLEKNPPDHF---------- 4843 Query: 338 XXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAIN 231 LP TC LK+P YS K V+ +KL YAI+ Sbjct: 4844 -----LPESYTCFFLLKMPRYSCKAVLLEKLKYAIH 4874
>TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protein (EC 6.3.2.-)| Length = 4065 Score = 38.9 bits (89), Expect = 0.009 Identities = 30/106 (28%), Positives = 38/106 (35%) Frame = -3 Query: 530 PAIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXX 351 P I + F E+ QFVTG ++P G L + R + Sbjct: 3967 PQIQWFWRAVRSFDKEELAKLLQFVTGTSKVPLNGFKELEGMNGVSRFNIHRDYGSKDR- 4025 Query: 350 XXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSF 213 LPS TC N L LP Y E + +LL AI G F Sbjct: 4026 ---------LPSSHTCFNQLDLPEYENYETLRSQLLKAITAGSDYF 4062
>HERC2_HUMAN (O95714) HECT domain and RCC1-like domain-containing protein 2| Length = 4834 Score = 38.5 bits (88), Expect = 0.012 Identities = 28/93 (30%), Positives = 42/93 (45%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 330 E+M F+ ++ F +FV G RLP +A + +++ Sbjct: 4706 EVMESFSNTERSLFLRFVWGRTRLPRT-IADFRGRDFVIQ-----------VLDKYNPPD 4753 Query: 329 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAIN 231 LP TC LKLP YS K+V+ +KL YAI+ Sbjct: 4754 HFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIH 4786
>HERC2_MOUSE (Q4U2R1) HECT domain and RCC1-like domain-containing protein 2| Length = 4836 Score = 38.5 bits (88), Expect = 0.012 Identities = 28/93 (30%), Positives = 42/93 (45%) Frame = -3 Query: 509 EIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXX 330 E+M F+ ++ F +FV G RLP +A + +++ Sbjct: 4708 EVMESFSNTERSLFLRFVWGRTRLPRT-IADFRGRDFVIQ-----------VLDKYNPPD 4755 Query: 329 XDLPSVMTCANYLKLPPYSTKEVMHKKLLYAIN 231 LP TC LKLP YS K+V+ +KL YAI+ Sbjct: 4756 HFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIH 4788
>NEDD4_HUMAN (P46934) E3 ubiquitin-protein ligase NEDD4 (EC 6.3.2.-)| Length = 1000 Score = 38.1 bits (87), Expect = 0.015 Identities = 28/89 (31%), Positives = 33/89 (37%) Frame = -3 Query: 485 EQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXXDLPSVMT 306 E++ QFVTG R+P G A L LP T Sbjct: 918 EKRIRLLQFVTGTSRVPMNGFAEL-----------YGSNGPQSFTVEQWGTPEKLPRAHT 966 Query: 305 CANYLKLPPYSTKEVMHKKLLYAINEGQG 219 C N L LPPY + E + KL AI QG Sbjct: 967 CFNRLDLPPYESFEELWDKLQMAIENTQG 995
>NEDD4_DROME (Q9VVI3) E3 ubiquitin-protein ligase Nedd-4 (EC 6.3.2.-) (DNedd4)| Length = 1007 Score = 37.4 bits (85), Expect = 0.026 Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 4/96 (4%) Frame = -3 Query: 494 FTPEQQHAFCQFVTGAPRLPPGGLASL----NPKLTIVRKHXXXXXXXXXXXXXXXXXXX 327 F+ E + QFVTG R+P G L P++ + K Sbjct: 922 FSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWGTPNN-------------- 967 Query: 326 DLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 P TC N L LPPY + KL+ AI QG Sbjct: 968 -FPRAHTCFNRLDLPPYEGYLQLKDKLIKAIEGSQG 1002
>NEDD4_RAT (Q62940) E3 ubiquitin-protein ligase NEDD4 (EC 6.3.2.-)| Length = 887 Score = 37.0 bits (84), Expect = 0.034 Identities = 27/89 (30%), Positives = 33/89 (37%) Frame = -3 Query: 485 EQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXXDLPSVMT 306 E++ QFVTG R+P G A L LP T Sbjct: 805 EKRIRLLQFVTGTSRVPMNGFAEL-----------YGSNGPQSFTVEQWGTPDKLPRAHT 853 Query: 305 CANYLKLPPYSTKEVMHKKLLYAINEGQG 219 C N L LPPY + + + KL AI QG Sbjct: 854 CFNRLDLPPYESFDELWDKLQMAIENTQG 882
>NEDD4_MOUSE (P46935) E3 ubiquitin-protein ligase NEDD4 (EC 6.3.2.-) (Neural| precursor cell expressed developmentally down-regulated protein 4) Length = 887 Score = 37.0 bits (84), Expect = 0.034 Identities = 27/89 (30%), Positives = 33/89 (37%) Frame = -3 Query: 485 EQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXXXXXXXXXXDLPSVMT 306 E++ QFVTG R+P G A L LP T Sbjct: 805 EKRIRLLQFVTGTSRVPMNGFAEL-----------YGSNGPQSFTVEQWGTPDKLPRAHT 853 Query: 305 CANYLKLPPYSTKEVMHKKLLYAINEGQG 219 C N L LPPY + + + KL AI QG Sbjct: 854 CFNRLDLPPYESFDELWDKLQMAIENTQG 882
>RSP5_YEAST (P39940) E3 ubiquitin--protein ligase RSP5 (EC 6.3.2.-)| Length = 809 Score = 35.4 bits (80), Expect = 0.098 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 4/99 (4%) Frame = -3 Query: 503 MTEFTPEQQHAFCQFVTGAPRLPPGGLASLN----PKLTIVRKHXXXXXXXXXXXXXXXX 336 ++E+ EQ+ QF TG R+P G L P+ + K Sbjct: 722 VSEWDNEQRARLLQFTTGTSRIPVNGFKDLQGSDGPRRFTIEK---------------AG 766 Query: 335 XXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 LP TC N + LP Y + M +KL A+ E G Sbjct: 767 EVQQLPKSHTCFNRVDLPQYVDYDSMKQKLTLAVEETIG 805
>EDD1_RAT (Q62671) Ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic| discs protein homolog) (100 kDa protein) (Fragment) Length = 920 Score = 32.7 bits (73), Expect = 0.64 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -3 Query: 323 LPSVMTCANYLKLPPYSTKEVMHKKLLYAI 234 LP+ TC + L +P YS+K+++ +KLL AI Sbjct: 883 LPTANTCISRLYVPLYSSKQILKQKLLLAI 912
>EDD1_MOUSE (Q80TP3) Ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic| discs protein homolog) Length = 2792 Score = 32.7 bits (73), Expect = 0.64 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -3 Query: 323 LPSVMTCANYLKLPPYSTKEVMHKKLLYAI 234 LP+ TC + L +P YS+K+++ +KLL AI Sbjct: 2755 LPTANTCISRLYVPLYSSKQILKQKLLLAI 2784
>HERC5_HUMAN (Q9UII4) HECT domain and RCC1-like domain-containing protein 5| (Cyclin-E-binding protein 1) Length = 1024 Score = 32.7 bits (73), Expect = 0.64 Identities = 29/104 (27%), Positives = 40/104 (38%) Frame = -3 Query: 530 PAIVNLLEIMTEFTPEQQHAFCQFVTGAPRLPPGGLASLNPKLTIVRKHXXXXXXXXXXX 351 P IV + + T E++ F F+TG RL L N K+T Sbjct: 935 PTIVMFWKAFHKLTLEEKKKFLVFLTGTDRLQMKDLN--NMKITFCCPESWNERDPIRA- 991 Query: 350 XXXXXXXXDLPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQG 219 +TC + L LP YST E + + L AIN +G Sbjct: 992 -------------LTCFSVLFLPKYSTMETVEEALQEAINNNRG 1022
>EDD1_HUMAN (O95071) Ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic| discs protein homolog) (hHYD) (Progestin-induced protein) Length = 2799 Score = 32.7 bits (73), Expect = 0.64 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -3 Query: 323 LPSVMTCANYLKLPPYSTKEVMHKKLLYAI 234 LP+ TC + L +P YS+K+++ +KLL AI Sbjct: 2762 LPTANTCISRLYVPLYSSKQILKQKLLLAI 2791
>HYD_DROME (P51592) Ubiquitin--protein ligase hyd (EC 6.3.2.-) (Protein| hyperplastic discs) Length = 2885 Score = 32.0 bits (71), Expect = 1.1 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -3 Query: 323 LPSVMTCANYLKLPPYSTKEVMHKKLLYAINEGQGSF 213 LP+ TC + L +P YS+K ++ K+L AI F Sbjct: 2848 LPTANTCISRLYIPLYSSKSILRSKMLMAIKSKNFGF 2884
>TBA3_MAIZE (P22275) Tubulin alpha-3 chain (Alpha-3 tubulin)| Length = 450 Score = 30.8 bits (68), Expect = 2.4 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +2 Query: 116 HDDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 HDD T +TGA HV + ++V EPT+ D+ G Sbjct: 45 HDDAFSTFFSQTGAGKHVPRAIFVDLEPTVIDEVRTG 81
>TBA_BOMMO (P52273) Tubulin alpha chain| Length = 450 Score = 30.0 bits (66), Expect = 4.1 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD+ T +TGA HV + L+V EPT+ D+ G Sbjct: 46 DDSFNTFFSETGAGKHVPRALFVDLEPTVVDEVRTG 81
>KRA3_CAPHI (P02442) Keratin, high-sulfur matrix protein, IIIA3 (M2.6 protein)| Length = 132 Score = 29.6 bits (65), Expect = 5.4 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Frame = -2 Query: 177 CWCTCKCAPVFIQL-VCSLSSCIT*ALSRFFCERFR 73 CW T C PV +Q C +SC SR C FR Sbjct: 92 CWATTCCQPVSVQCPCCRPTSCQPAPCSRTTCRTFR 127
>TBA5_CHICK (P09644) Tubulin alpha-5 chain| Length = 448 Score = 29.6 bits (65), Expect = 5.4 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPGL 229 DD+ T +TGA HV + ++V EPT+ D+ G+ Sbjct: 46 DDSFTTFFCETGAGKHVPRAIFVDLEPTVIDEVRAGI 82
>KRA3_SHEEP (P02441) Keratin, high-sulfur matrix protein, IIIA3| Length = 131 Score = 29.6 bits (65), Expect = 5.4 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Frame = -2 Query: 177 CWCTCKCAPVFIQL-VCSLSSCIT*ALSRFFCERFR 73 CW T C PV +Q C +SC SR C FR Sbjct: 91 CWATTCCQPVSVQCPCCRPTSCQPAPCSRTTCRTFR 126
>TBA_ONCKE (P30436) Tubulin alpha chain| Length = 444 Score = 29.6 bits (65), Expect = 5.4 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPGL 229 DD+ T +TGA HV + ++V EPT+ D+ G+ Sbjct: 40 DDSFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGI 76
>TBA_LEPDS (Q8WQ47) Tubulin alpha chain (Allergen Lep d ?)| Length = 450 Score = 29.3 bits (64), Expect = 7.1 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD+ T +TG+ HV + +YV EPT+ D+ G Sbjct: 46 DDSFNTFFSETGSGKHVPRAVYVDLEPTVVDEVRTG 81
>YHR5_YEAST (P38823) RING finger protein YHR115C| Length = 416 Score = 29.3 bits (64), Expect = 7.1 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +2 Query: 5 ENIYKCPGMKRECYKHWHHKIQALNLSQKKRLK 103 E IY+C MK E K W K A N R+K Sbjct: 281 EEIYRCVKMKIELNKSWKLKANAFNKEALSRIK 313
>TBA_PLAFK (P14642) Tubulin alpha chain| Length = 453 Score = 28.9 bits (63), Expect = 9.2 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = +2 Query: 101 KAYVIHDDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 KA +DD T +TGA HV + ++V EPT+ D+ G Sbjct: 40 KASRANDDAFNTFFSETGAGKHVPRCVFVDLEPTVVDEVRTG 81
>TBA2_PELFA (Q40832) Tubulin alpha-2 chain| Length = 453 Score = 28.9 bits (63), Expect = 9.2 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD T +TGA HV + +YV EPT+ D+ G Sbjct: 46 DDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTG 81
>TBA1_PELFA (Q40831) Tubulin alpha-1 chain| Length = 453 Score = 28.9 bits (63), Expect = 9.2 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD T +TGA HV + +YV EPT+ D+ G Sbjct: 46 DDAFNTFFSETGAGKHVPRAVYVDLEPTVCDEVRTG 81
>TBAT_ONCMY (P18288) Tubulin alpha chain, testis-specific| Length = 450 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD+ T +TGA HV + ++V EPT+ D+ G Sbjct: 46 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81
>TBA3_RAT (Q68FR8) Tubulin alpha-3 chain (Alpha-tubulin 3)| Length = 450 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD+ T +TGA HV + ++V EPT+ D+ G Sbjct: 46 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81
>TBA3_MOUSE (P05214) Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7)| (Alpha-tubulin isotype M-alpha-3/7) Length = 450 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD+ T +TGA HV + ++V EPT+ D+ G Sbjct: 46 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81
>TBA3_DROME (P06605) Tubulin alpha-3 chain| Length = 450 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD+ T +TGA HV + ++V EPT+ D+ G Sbjct: 46 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81
>TBA2_HUMAN (Q13748) Tubulin alpha-2 chain (Alpha-tubulin 2)| Length = 450 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD+ T +TGA HV + ++V EPT+ D+ G Sbjct: 46 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81
>TBA1_DROME (P06603) Tubulin alpha-1 chain| Length = 450 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD+ T +TGA HV + ++V EPT+ D+ G Sbjct: 46 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81
>RMAR_SACCA (Q8M355) Mitochondrial ribosomal protein VAR1| Length = 326 Score = 28.9 bits (63), Expect = 9.2 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +3 Query: 81 FHKRNDLKPMLYMTTMNKLTE*KLVRIYMCTNICMLVLN 197 ++K N+L M+ M MNKL KL+ + M N+ M V N Sbjct: 63 YNKNNELNMMMMMNMMNKLLY-KLMNMIMINNMTMNVNN 100
>TBA2_PATVU (P41383) Tubulin alpha-2/alpha-4 chain| Length = 452 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD+ T +TGA HV + ++V EPT+ D+ G Sbjct: 46 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81
>TBA1_PARLI (P18258) Tubulin alpha-1 chain| Length = 452 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD+ T +TGA HV + ++V EPT+ D+ G Sbjct: 46 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81
>TBA_OCTDO (Q06331) Tubulin alpha chain| Length = 451 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPGL 229 DD+ T +TG+ HV + ++V EPT+ D+ GL Sbjct: 46 DDSFNTFFSETGSGKHVPRAVFVDLEPTVVDEIRTGL 82
>TBA3_HOMAM (Q94572) Tubulin alpha-3 chain (Alpha-III tubulin)| Length = 451 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPGL 229 DD+ T +TGA HV + ++V EPT+ D+ G+ Sbjct: 46 DDSFNTFFCETGAGKHVPRAVFVDLEPTVIDEIRTGV 82
>TBA1_HOMAM (Q25008) Tubulin alpha-1 chain (Alpha-I tubulin)| Length = 451 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +2 Query: 101 KAYVIHDDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPGL 229 K + DD+ T +TGA HV + ++V EP++ D+ G+ Sbjct: 40 KTVGVSDDSFNTFFSETGAGKHVPRAVFVDLEPSVVDEVRSGV 82
>TBA2_DROME (P06604) Tubulin alpha-2 chain| Length = 449 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 119 DDNEQTN*IKTGAHLHVHQHLYVSFEPTMKDQTTPG 226 DD+ T +TGA HV + ++V EPT+ D+ G Sbjct: 46 DDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,212,544 Number of Sequences: 219361 Number of extensions: 1213217 Number of successful extensions: 2949 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 2851 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2919 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
