>NAM8_YEAST (Q00539) Protein NAM8|
          Length = 523

 Score = 59.7 bits (143), Expect = 6e-09
 Identities = 31/57 (54%), Positives = 35/57 (61%)
 Frame = -2

Query: 585 PYGEVVHVKIPVGKRCGFVQYANRPSAEXXXXXXXXXXXXXQNVRLSWGRSPSNKQT 415
           P+G +V+VKIPVGK CGFVQY +R SAE               VRLSWGRS   KQT
Sbjct: 335 PFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRSA--KQT 389

>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome|
           II
          Length = 473

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
 Frame = -2

Query: 582 YGEVVHVKIPVGKRCGFVQYANRPSAEXXXXXXXXXXXXXQNVRLSWGRSPS-------N 424
           +GE+V+VKIP GK CGFVQ+ NR SAE               +RLSWGR+ +       N
Sbjct: 326 FGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRNQNPIAAPALN 385

Query: 423 KQTQPQEAT 397
            Q+Q  + T
Sbjct: 386 YQSQVSQTT 394

>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1|
          Length = 632

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 19/51 (37%), Positives = 31/51 (60%)
 Frame = -2

Query: 585 PYGEVVHVKIPVGKRCGFVQYANRPSAEXXXXXXXXXXXXXQNVRLSWGRS 433
           P+G ++++KIP GK CGFVQY+ + +AE              ++RL+WG +
Sbjct: 319 PFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369

>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding|
           protein RBP1)
          Length = 672

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = -2

Query: 585 PYGEVVHVKIPVGKRCGFVQYANRPSAEXXXXXXXXXXXXXQNVRLSWGR-SPSNKQT 415
           P+G +++V+IP GK CGFV++  R  AE               +RLSWGR S SN +T
Sbjct: 382 PFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGRPSSSNAKT 439

>YBKC_SCHPO (O94621) Hypothetical RNA-binding protein C1289.12 in chromosome II|
          Length = 352

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = -2

Query: 582 YGEVVHVKIPVGKRCGFVQYANRPSAEXXXXXXXXXXXXXQNVRLSWGRSPSNKQTQPQE 403
           +GE+++ +  V    G + +A R  AE               ++LSW R PS      ++
Sbjct: 199 FGEILYTQ--VNNNSGRIVFAQRYFAEQAINEMNNFPLHGVRIQLSWARPPSMALLPSKQ 256

Query: 402 ATQW 391
           +T W
Sbjct: 257 STYW 260

>YNK6_YEAST (P50942) Hypothetical 133.3 kDa protein in CYB5-LEU4 intergenic|
           region
          Length = 1183

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +3

Query: 42  NIVHNRPNRPCHEAIKIRSPGTLSLSIDRCYNISLDSAFKQGFSSH 179
           N     P  PCHE  K+ S G+   S D     +L    K+GF+ H
Sbjct: 154 NAQEQAPKHPCHELRKLLSNGSFYYSTDFDLTCTLQ---KRGFTEH 196


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,170,373
Number of Sequences: 219361
Number of extensions: 1391212
Number of successful extensions: 3259
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3258
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)