>DEDD2_HUMAN (Q8WXF8) DNA-binding death effector domain-containing protein 2|
           (FADD-like anti-apoptotic molecule 3) (DED-containing
           protein FLAME-3)
          Length = 326

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 23/108 (21%), Positives = 48/108 (44%)
 Frame = -2

Query: 598 PCIPDRQGCRRTHLEIRSDGTRQHKVCRRRAHCFGKQRRGRFDQ*QRPSREAKALDGQPT 419
           P  P+R     +    R++G+ +    RR++      ++G+++    P++  +   G+P+
Sbjct: 109 PVSPERYSYGTSSSSKRTEGSCRR---RRQSSSSANSQQGQWETGSPPTKRQRRSRGRPS 165

Query: 418 QSLRDRQRGRPGLHLRQGATDQGSRVRNGKKVCRTRKKIGTKHPRLSP 275
              R R+RG P    +Q    + S    GK  C  R ++  ++    P
Sbjct: 166 GGARRRRRGAPAAPQQQSEPARPS--SEGKVTCDIRLRVRAEYCEHGP 211

>NPBL_MOUSE (Q6KCD5) Nipped-B-like protein (Delangin homolog) (SCC2 homolog)|
          Length = 2798

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 23/85 (27%), Positives = 32/85 (37%)
 Frame = -2

Query: 583  RQGCRRTHLEIRSDGTRQHKVCRRRAHCFGKQRRGRFDQ*QRPSREAKALDGQPTQSLRD 404
            R   R  H   +SDG++  K+ R+  H  G  R        RPS E K+    P     D
Sbjct: 845  RSSSRNDH-STKSDGSKTEKLERKHRHESGDSR-------DRPSGEQKSRPDSPRVKQGD 896

Query: 403  RQRGRPGLHLRQGATDQGSRVRNGK 329
              + RPG        D+ +     K
Sbjct: 897  TNKSRPGFKSPNSKDDKRTEGNRSK 921

>FAD11_MYCTU (Q10776) Putative fatty-acid--CoA ligase fadD11 (EC 6.2.1.-)|
           (Acyl-CoA synthetase)
          Length = 571

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 30/96 (31%), Positives = 37/96 (38%)
 Frame = -2

Query: 595 CIPDRQGCRRTHLEIRSDGTRQHKVCRRRAHCFGKQRRGRFDQ*QRPSREAKALDGQPTQ 416
           C P R G       +  DG    +V   R  C  ++R   F   Q P+R A         
Sbjct: 13  CRPGRFGSSARRHGLADDG-EPDRVLPARRRCSARRRHLVFGV-QHPARRAA-------- 62

Query: 415 SLRDRQRGRPGLHLRQGATDQGSRVRNGKKVCRTRK 308
            LR RQRG  G HLR       SR R   +  R R+
Sbjct: 63  DLRVRQRGDQGGHLRATVRRSRSRQRCAHRTHRLRR 98

>FBS1_HUMAN (P62706) Fibrosin-1|
          Length = 177

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 261 CAWHCGDRRGCLVPIFFLVLQTFLPFRTREPWS 359
           CAW CG  RG     + L+  TF P R   PW+
Sbjct: 37  CAWECGSSRG----PWGLLRYTFAPVRACRPWA 65

>GUAA_XANOR (Q5H0S2) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 521

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
 Frame = -3

Query: 534 ANTKFVAGELTASENNDEAGSTSNNAQAEKPKHWTGNLPKVFVIGSVVALACTFDKGLLT 355
           AN K++A      +  + AGS + NA   K  H  G LP+   +G V  L   F   +  
Sbjct: 323 ANAKWLAQGTIYPDVIESAGSKTGNAHVIKSHHNVGGLPQHMKLGLVEPLRELFKDEVRR 382

Query: 354 KALVFGTARR------FAGPG 310
             +  G  R       F GPG
Sbjct: 383 LGVELGLPRTMVYRHPFPGPG 403

>GUAA_XANOM (Q2P3Q9) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 521

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
 Frame = -3

Query: 534 ANTKFVAGELTASENNDEAGSTSNNAQAEKPKHWTGNLPKVFVIGSVVALACTFDKGLLT 355
           AN K++A      +  + AGS + NA   K  H  G LP+   +G V  L   F   +  
Sbjct: 323 ANAKWLAQGTIYPDVIESAGSKTGNAHVIKSHHNVGGLPQHMKLGLVEPLRELFKDEVRR 382

Query: 354 KALVFGTARR------FAGPG 310
             +  G  R       F GPG
Sbjct: 383 LGVELGLPRTMVYRHPFPGPG 403

>HLES_DROME (Q02308) Protein hairless|
          Length = 1077

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = -1

Query: 617 NGLSLASVHTRPPGLPANPSRNSQRWHTPTQSLSPASS 504
           NG S  S    PP LPAN SR +    TPT + +P+SS
Sbjct: 94  NGSSSTSYPPLPPPLPANLSRTT----TPTTTTTPSSS 127

>RUVX_XANOR (Q5H2Z1) Putative Holliday junction resolvase (EC 3.1.-.-)|
          Length = 167

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 9/48 (18%)
 Frame = -2

Query: 589 PDRQGCRRTHLEIRSDGT---------RQHKVCRRRAHCFGKQRRGRF 473
           PD     R H E R DG           +H+  R+RAH F +Q R R+
Sbjct: 60  PDWDALDRVHKEWRPDGLVVGDPLTLDDKHQPARKRAHAFARQLRERY 107

>RLA0_DROME (P19889) 60S acidic ribosomal protein P0 (DNA-(apurinic or|
           apyrimidinic site) lyase) (EC 4.2.99.18)
           (Apurinic-apyrimidinic endonuclease)
          Length = 317

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -1

Query: 269 PCTFILMHNRATLSGIIFGPETLALADEDIGTRFARGRKHL*AGLC 132
           P ++ L+ N+   SG IF PE L +  ED+  +F +G  +L A +C
Sbjct: 182 PFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANL-AAVC 226

>CLPP3_PROMA (Q7V9L6) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 216

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 260 MCMALR**ARMFGSYLLPGPAN--LLAVPNTRALVSSPLSKVQARATTLPI 406
           MC  L   A   G++LL G +    LA+PN+R ++  PL   Q +A  + I
Sbjct: 113 MCYGL---AASMGAFLLAGGSKGKRLALPNSRIMIHQPLGGAQGQAVEIEI 160

>CLPP3_PROMP (Q7UZK7) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 215

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 284 ARMFGSYLLPGPAN--LLAVPNTRALVSSPLSKVQARATTLPI 406
           A   G++LL G A    LA+PN+R ++  PL   Q +A  + I
Sbjct: 117 AASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEI 159

>PAAE_ECOLI (P76081) Probable phenylacetic acid degradation NADH oxidoreductase|
           paaE (EC 1.-.-.-)
          Length = 356

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 454 SREAKALDGQPTQSLRDRQRGRPGLHLRQGATDQGSRVRNGKKVCRT 314
           +R+A  +     Q L++  R RPG HL   A+  G  +R    +CR+
Sbjct: 16  TRDAVTITFAVPQPLQEAYRFRPGQHLTLKASFDGEELRRCYSICRS 62

>Y1031_SULSO (Q97Z99) UPF0100 protein SSO1031|
          Length = 402

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
 Frame = +2

Query: 284 ARMFGSYLLPGPANLLAVPNTRALVSSPLSKVQARATTLPITKTLGRLPVQCFGFSAWAL 463
           A + G YL+  P+N +   ++    SS LS     ++T  IT + G   +  F   A+ L
Sbjct: 40  AGVVGYYLINHPSNSVTTSSSSTTTSSSLSSTSISSSTTNITSSQG---ITVFVAGAY-L 95

Query: 464 LLVEPASSLFSEAVSSP-----ATNFVLACAIAANFEMGSPAALAVWYARRPGSIRLTXP 628
            ++   +  F  A   P     + +F LA  IA+   + +   + V Y +   ++ LT  
Sbjct: 96  AILNYLADQFQNATEIPVHVVGSGSFALASQIASQTPVPANVFIPVAYIQ---AVELTGS 152

Query: 629 HMP 637
             P
Sbjct: 153 RNP 155

>UME6_YEAST (P39001) Transcriptional regulator UME6 (Negative transcriptional|
           regulator of IME2)
          Length = 836

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
 Frame = -2

Query: 364 ATDQGSRVRNGKKVCRTRKKIGTKH-------PRLSPQCHAHSF 254
           +T QG+R R G  +CR RKK  T+         RL   CH  +F
Sbjct: 760 STSQGTRSRTGCWICRLRKKKCTEERPHCFNCERLKLDCHYDAF 803


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,091,323
Number of Sequences: 219361
Number of extensions: 1800206
Number of successful extensions: 5556
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5551
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)