ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX072530.5| Zebrafish DNA sequence from clone DKEY-221K19, c... 46 0.14
2emb|AL954359.5| Zebrafish DNA sequence from clone CH211-270N8, c... 46 0.14
3gb|AC164096.3| Mus musculus BAC clone RP23-356H17 from chromosom... 42 2.2
4emb|CR589948.8| Zebrafish DNA sequence from clone CH211-160P12 i... 42 2.2
5emb|AL357080.13| Human DNA sequence from clone RP11-432L12 on ch... 42 2.2
6gb|AC117436.6| Homo sapiens 3 BAC RP11-69K16 (Roswell Park Cance... 42 2.2
7dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, comp... 42 2.2
8gb|AC105094.6| Homo sapiens chromosome 18, clone RP11-1096D5, co... 42 2.2
9gb|AC022392.5| Homo sapiens chromosome 10 clone RP11-150D20, com... 42 2.2
10gb|AF499931.1| Vibrio vulnificus wcvH and glycosyltransferase (w... 42 2.2
11gb|AF249892.1|AF249892 Heterodera glycines helix-loop-helix DNA-... 42 2.2
12emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chr... 42 2.2
13gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, c... 42 2.2
14gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete s... 42 2.2
15gb|AC174647.2| Mus musculus BAC clone RP23-25C24 from chromosome... 42 2.2
16gb|AC134615.5| Mus musculus BAC clone RP23-148H3 from 8, complet... 42 2.2
17gb|AC171241.2| Mus musculus BAC clone RP23-94E5 from chromosome ... 42 2.2
18emb|AJ249895.1|MMU249895 Mus musculus mas proto-oncogene and Igf... 42 2.2
19gb|BC108546.1| Xenopus laevis cDNA clone MGC:131007 IMAGE:797912... 40 8.6
20emb|CT009556.7| Mouse DNA sequence from clone RP23-87H19 on chro... 40 8.6
21emb|CT009760.5| Mouse DNA sequence from clone RP23-92K14 on chro... 40 8.6
22gb|AC135048.2| Homo sapiens chromosome 16 clone RP11-1072A3, com... 40 8.6
23gb|AC121608.3| Mus musculus BAC clone RP23-317M3 from chromosome... 40 8.6
24emb|AL449305.4| Human DNA sequence from clone RP11-110L1 on chro... 40 8.6
25emb|AL139125.18| Human DNA sequence from clone RP5-1031D4 on chr... 40 8.6
26emb|AL137066.15| Human DNA sequence from clone RP11-10I9 on chro... 40 8.6
27gb|AC160015.2| Mus musculus BAC clone RP23-433E2 from chromosome... 40 8.6
28emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 40 8.6
29gb|AC159460.9| Mus musculus chromosome 15, clone RP24-306N20, co... 40 8.6
30emb|AL662811.20| Mouse DNA sequence from clone RP23-202E24 on ch... 40 8.6
31gb|AC103579.10| Mus Musculus Strain C57BL6/J Chromosome 14 BAC C... 40 8.6
32gb|AC117403.4| Homo sapiens 12 BAC RP11-239E14 (Roswell Park Can... 40 8.6
33gb|AC012464.25| Homo sapiens 12 BAC RP11-1060G2 (Roswell Park Ca... 40 8.6
34gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map... 40 8.6
35gb|AC008969.6| Homo sapiens chromosome 19 clone CTD-2368P22, com... 40 8.6
36gb|AC009039.7| Homo sapiens chromosome 16 clone RP11-152O14, com... 40 8.6
37dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
38dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
39gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (T... 40 8.6
40gb|AC007341.10| Homo sapiens chromosome 16 clone RP11-381L15, co... 40 8.6
41gb|AC073875.6| Homo sapiens BAC clone RP11-594C24 from 2, comple... 40 8.6
42gb|AC156014.2| Mus musculus BAC clone RP24-439D9 from chromosome... 40 8.6
43emb|BX001055.11| Zebrafish DNA sequence from clone CH211-87M5 in... 40 8.6
44gb|AC109256.11| Mus musculus chromosome 8, clone RP23-11D11, com... 40 8.6
45emb|BX469936.11| Zebrafish DNA sequence from clone DKEY-32I12 in... 40 8.6
46gb|AC155176.6| Mus musculus 10 BAC RP24-219F17 (Roswell Park Can... 40 8.6
47emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 8.6
48gb|AC163763.3| Pan troglodytes BAC clone CH251-180G5 from chromo... 40 8.6
49emb|AL132715.3|CNS01DTE Human chromosome 14 DNA sequence BAC R-3... 40 8.6
50gb|AC153830.5| Mus musculus 10 BAC RP23-299H19 (Roswell Park Can... 40 8.6
51gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
52emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.6
53gb|AC147598.2| Gallus gallus BAC clone CH261-121K14 from chromos... 40 8.6
54gb|AC171404.5| Mus musculus chromosome 7, clone RP24-235N21, com... 40 8.6
55gb|AF418088.1| Leucaena confertiflora var. confertiflora clone a... 40 8.6 
>emb|BX072530.5| Zebrafish DNA sequence from clone DKEY-221K19, complete sequence
          Length = 167009

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 439   tcaaggaattttttgttttgttt 461
             |||||||||||||||||||||||
Sbjct: 85391 tcaaggaattttttgttttgttt 85369
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>emb|AL954359.5| Zebrafish DNA sequence from clone CH211-270N8, complete sequence
          Length = 167392

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 439   tcaaggaattttttgttttgttt 461
             |||||||||||||||||||||||
Sbjct: 52788 tcaaggaattttttgttttgttt 52766
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>gb|AC164096.3| Mus musculus BAC clone RP23-356H17 from chromosome 8, complete sequence
          Length = 229851

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 441    aaggaattttttgttttgttt 461
              |||||||||||||||||||||
Sbjct: 145423 aaggaattttttgttttgttt 145443
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>emb|CR589948.8| Zebrafish DNA sequence from clone CH211-160P12 in linkage group 15,
             complete sequence
          Length = 162791

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 565   aacaccttacattacattgtc 585
             |||||||||||||||||||||
Sbjct: 26949 aacaccttacattacattgtc 26929
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>emb|AL357080.13| Human DNA sequence from clone RP11-432L12 on chromosome 6 Contains STSs
             and GSSs, complete sequence
          Length = 172073

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 591   aatttcatgacttctttgctt 611
             |||||||||||||||||||||
Sbjct: 51692 aatttcatgacttctttgctt 51672
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>gb|AC117436.6| Homo sapiens 3 BAC RP11-69K16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 133636

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 407    atttactaaaccaccatgcag 427
              |||||||||||||||||||||
Sbjct: 111007 atttactaaaccaccatgcag 111027
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>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence
          Length = 1857073

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 349    gcatattacagaagcatttgg 369
              |||||||||||||||||||||
Sbjct: 457729 gcatattacagaagcatttgg 457709
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>gb|AC105094.6| Homo sapiens chromosome 18, clone RP11-1096D5, complete sequence
          Length = 210317

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 441    aaggaattttttgttttgttt 461
              |||||||||||||||||||||
Sbjct: 189242 aaggaattttttgttttgttt 189222
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>gb|AC022392.5| Homo sapiens chromosome 10 clone RP11-150D20, complete sequence
          Length = 196467

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 437   tgtcaaggaattttttgttttgttt 461
             |||| ||||||||||||||||||||
Sbjct: 54979 tgtccaggaattttttgttttgttt 55003
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>gb|AF499931.1| Vibrio vulnificus wcvH and glycosyltransferase (wcvI) genes, complete
            cds
          Length = 2178

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 349  gcatattacagaagcatttgg 369
            |||||||||||||||||||||
Sbjct: 1073 gcatattacagaagcatttgg 1093
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>gb|AF249892.1|AF249892 Heterodera glycines helix-loop-helix DNA-binding protein-like mRNA,
            partial sequence
          Length = 1284

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 441  aaggaattttttgttttgttt 461
            |||||||||||||||||||||
Sbjct: 1194 aaggaattttttgttttgttt 1214
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>emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chromosome 17, complete
              sequence
          Length = 204320

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 441    aaggaattttttgttttgttt 461
              |||||||||||||||||||||
Sbjct: 133900 aaggaattttttgttttgttt 133920
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>gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, complete sequence
          Length = 186153

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 441    aaggaattttttgttttgttt 461
              |||||||||||||||||||||
Sbjct: 159719 aaggaattttttgttttgttt 159739
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>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence
          Length = 1844853

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 349     gcatattacagaagcatttgg 369
               |||||||||||||||||||||
Sbjct: 1732428 gcatattacagaagcatttgg 1732408
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>gb|AC174647.2| Mus musculus BAC clone RP23-25C24 from chromosome 14, complete sequence
          Length = 238300

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 441    aaggaattttttgttttgttt 461
              |||||||||||||||||||||
Sbjct: 209859 aaggaattttttgttttgttt 209879
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>gb|AC134615.5| Mus musculus BAC clone RP23-148H3 from 8, complete sequence
          Length = 199454

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 441   aaggaattttttgttttgttt 461
             |||||||||||||||||||||
Sbjct: 15381 aaggaattttttgttttgttt 15401
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>gb|AC171241.2| Mus musculus BAC clone RP23-94E5 from chromosome 14, complete sequence
          Length = 244795

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 441    aaggaattttttgttttgttt 461
              |||||||||||||||||||||
Sbjct: 117550 aaggaattttttgttttgttt 117570
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>emb|AJ249895.1|MMU249895 Mus musculus mas proto-oncogene and Igf2r gene for insulin-like growth
              factor type 2 and L41ps and Au76 pseudogenes
          Length = 138490

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 441    aaggaattttttgttttgttt 461
              |||||||||||||||||||||
Sbjct: 113556 aaggaattttttgttttgttt 113536
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>gb|BC108546.1| Xenopus laevis cDNA clone MGC:131007 IMAGE:7979127, complete cds
          Length = 1525

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 442  aggaattttttgttttgttt 461
            ||||||||||||||||||||
Sbjct: 1249 aggaattttttgttttgttt 1268
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>emb|CT009556.7| Mouse DNA sequence from clone RP23-87H19 on chromosome 14, complete
             sequence
          Length = 227368

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 444   gaattttttgttttgtttca 463
             ||||||||||||||||||||
Sbjct: 54235 gaattttttgttttgtttca 54216
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>emb|CT009760.5| Mouse DNA sequence from clone RP23-92K14 on chromosome 16, complete
              sequence
          Length = 212227

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    aggaattttttgttttgttt 461
              ||||||||||||||||||||
Sbjct: 183134 aggaattttttgttttgttt 183153
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>gb|AC135048.2| Homo sapiens chromosome 16 clone RP11-1072A3, complete sequence
          Length = 177719

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    ttttttgttttgtttcagat 466
              ||||||||||||||||||||
Sbjct: 137930 ttttttgttttgtttcagat 137949
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>gb|AC121608.3| Mus musculus BAC clone RP23-317M3 from chromosome 9, complete sequence
          Length = 207820

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   tcaaggaattttttgttttg 458
             ||||||||||||||||||||
Sbjct: 90964 tcaaggaattttttgttttg 90945
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>emb|AL449305.4| Human DNA sequence from clone RP11-110L1 on chromosome 9q32-33.2 Contains
              the 5' end of a gene for a novel protein (KIAA0674), the
              SLC31A1 gene for solute carrier family 31 (copper
              transporters) member 1, the gene for CDC26 subunit of
              anaphase promoting complex (CDC26), the PRPF4 gene for PRP4
              pre-mRNA processing factor 4 homolog (yeast), a novel gene,
              the 3' end of the gene for a novel protein similar to
              spermatid WD-repeat protein (FLJ90410, FLJ35921) and two
              CpG islands, complete sequence
          Length = 160604

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    aggaattttttgttttgttt 461
              ||||||||||||||||||||
Sbjct: 159284 aggaattttttgttttgttt 159265
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>emb|AL139125.18| Human DNA sequence from clone RP5-1031D4 on chromosome 10 Contains the
             5' end of the gene for a novel protein (KIAA1617), a novel
             gene and a CpG island, complete sequence
          Length = 124437

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   aggaattttttgttttgttt 461
             ||||||||||||||||||||
Sbjct: 20800 aggaattttttgttttgttt 20781
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>emb|AL137066.15| Human DNA sequence from clone RP11-10I9 on chromosome 9 Contains
           the 5' end of the gene for a novel protein similar to
           spermatid WD-repeat protein (FLJ90410, FLJ35921), the
           gene for a novel protein similar to B-box and
           SPRY-domain containing protein (BSPRY) (FLJ20150), a
           novel gene (FLJ39748), a novel gene, the ALAD gene for
           aminolevulinate delta- dehydratase (ALADH), the POLE3
           gene for the polymerase (DNA directed) epsilon 3 (p17
           subunit) (p17, YBL1, Ybl1, CHRAC17, CHARAC17), the 5'
           end of the RGS3 gene for the regulator of G-protein
           signalling 3 (C2PA, RGP3, FLJ20370, PDZ-RGS3) and six
           CpG islands, complete sequence
          Length = 137718

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 aggaattttttgttttgttt 461
           ||||||||||||||||||||
Sbjct: 680 aggaattttttgttttgttt 661
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>gb|AC160015.2| Mus musculus BAC clone RP23-433E2 from chromosome 9, complete sequence
          Length = 209970

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    aggaattttttgttttgttt 461
              ||||||||||||||||||||
Sbjct: 144413 aggaattttttgttttgttt 144394
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>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   tctgaactgctagattacat 307
             ||||||||||||||||||||
Sbjct: 28457 tctgaactgctagattacat 28476
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>gb|AC159460.9| Mus musculus chromosome 15, clone RP24-306N20, complete sequence
          Length = 184875

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 588    acaaatttcatgacttcttt 607
              ||||||||||||||||||||
Sbjct: 113340 acaaatttcatgacttcttt 113321
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>emb|AL662811.20| Mouse DNA sequence from clone RP23-202E24 on chromosome 11 Contains the
              3' end of a novel gene and a myc induced nuclear antigen
              (Mina) pseudogene, complete sequence
          Length = 226642

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    gcagcacactggagaaaggg 337
              ||||||||||||||||||||
Sbjct: 150772 gcagcacactggagaaaggg 150791
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>gb|AC103579.10| Mus Musculus Strain C57BL6/J Chromosome 14 BAC Clone RP23-145J23,
              Complete Sequence, complete sequence
          Length = 227361

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 444    gaattttttgttttgtttca 463
              ||||||||||||||||||||
Sbjct: 193799 gaattttttgttttgtttca 193818
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>gb|AC117403.4| Homo sapiens 12 BAC RP11-239E14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 121632

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   aggaattttttgttttgttt 461
             ||||||||||||||||||||
Sbjct: 42753 aggaattttttgttttgttt 42734
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>gb|AC012464.25| Homo sapiens 12 BAC RP11-1060G2 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 173765

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   gaattttttgttttgtttca 463
             ||||||||||||||||||||
Sbjct: 57997 gaattttttgttttgtttca 58016
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>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07,
             complete sequence
          Length = 109741

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    ggtttctactttattatagt 35
             ||||||||||||||||||||
Sbjct: 82660 ggtttctactttattatagt 82641
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>gb|AC008969.6| Homo sapiens chromosome 19 clone CTD-2368P22, complete sequence
          Length = 98561

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   aggaattttttgttttgttt 461
             ||||||||||||||||||||
Sbjct: 76291 aggaattttttgttttgttt 76272
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>gb|AC009039.7| Homo sapiens chromosome 16 clone RP11-152O14, complete sequence
          Length = 163228

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 442  aggaattttttgttttgttt 461
            ||||||||||||||||||||
Sbjct: 2003 aggaattttttgttttgttt 1984
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 288      tctgaactgctagattacat 307
                ||||||||||||||||||||
Sbjct: 34722895 tctgaactgctagattacat 34722914
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 304      acatagaacatgtcgcagca 323
                ||||||||||||||||||||
Sbjct: 21545853 acatagaacatgtcgcagca 21545872
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>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14)
            genes, complete cds; and unknown gene
          Length = 43606

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   aaaccacgtcagttatttcc 68
            ||||||||||||||||||||
Sbjct: 9853 aaaccacgtcagttatttcc 9834
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>gb|AC007341.10| Homo sapiens chromosome 16 clone RP11-381L15, complete sequence
          Length = 168612

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    aggaattttttgttttgttt 461
              ||||||||||||||||||||
Sbjct: 154033 aggaattttttgttttgttt 154014
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>gb|AC073875.6| Homo sapiens BAC clone RP11-594C24 from 2, complete sequence
          Length = 145028

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    tctccattcccaaatttggt 274
              ||||||||||||||||||||
Sbjct: 105640 tctccattcccaaatttggt 105659
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>gb|AC156014.2| Mus musculus BAC clone RP24-439D9 from chromosome 16, complete sequence
          Length = 194272

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    aggaattttttgttttgttt 461
              ||||||||||||||||||||
Sbjct: 139942 aggaattttttgttttgttt 139923
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>emb|BX001055.11| Zebrafish DNA sequence from clone CH211-87M5 in linkage group 9, complete
              sequence
          Length = 194418

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 441    aaggaattttttgttttgtttcag 464
              ||||||| ||||||||||||||||
Sbjct: 140847 aaggaatattttgttttgtttcag 140870
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>gb|AC109256.11| Mus musculus chromosome 8, clone RP23-11D11, complete sequence
          Length = 242101

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 112    tacttgtactgattctatgtcaga 135
              |||||| |||||||||||||||||
Sbjct: 132022 tacttggactgattctatgtcaga 131999
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>emb|BX469936.11| Zebrafish DNA sequence from clone DKEY-32I12 in linkage group 19,
             complete sequence
          Length = 141772

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 578   acattgtcaaacaaatttca 597
             ||||||||||||||||||||
Sbjct: 27258 acattgtcaaacaaatttca 27239
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>gb|AC155176.6| Mus musculus 10 BAC RP24-219F17 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 186725

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   aggaattttttgttttgttt 461
             ||||||||||||||||||||
Sbjct: 15846 aggaattttttgttttgttt 15827
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>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   tctgaactgctagattacat 307
             ||||||||||||||||||||
Sbjct: 65915 tctgaactgctagattacat 65934
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>gb|AC163763.3| Pan troglodytes BAC clone CH251-180G5 from chromosome unknown, complete
             sequence
          Length = 157645

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   aggaattttttgttttgttt 461
             ||||||||||||||||||||
Sbjct: 22561 aggaattttttgttttgttt 22542
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>emb|AL132715.3|CNS01DTE Human chromosome 14 DNA sequence BAC R-368E9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 199335

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 442   aggaattttttgttttgttt 461
             ||||||||||||||||||||
Sbjct: 38547 aggaattttttgttttgttt 38528
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>gb|AC153830.5| Mus musculus 10 BAC RP23-299H19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 200647

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    aggaattttttgttttgttt 461
              ||||||||||||||||||||
Sbjct: 179045 aggaattttttgttttgttt 179026
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 304      acatagaacatgtcgcagca 323
                ||||||||||||||||||||
Sbjct: 21474174 acatagaacatgtcgcagca 21474193
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>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 158019

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 304    acatagaacatgtcgcagca 323
              ||||||||||||||||||||
Sbjct: 100036 acatagaacatgtcgcagca 100017
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>gb|AC147598.2| Gallus gallus BAC clone CH261-121K14 from chromosome unknown,
            complete sequence
          Length = 197142

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 442  aggaattttttgttttgttt 461
            ||||||||||||||||||||
Sbjct: 2776 aggaattttttgttttgttt 2795
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>gb|AC171404.5| Mus musculus chromosome 7, clone RP24-235N21, complete sequence
          Length = 146054

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    tttctactttattatagtat 37
             ||||||||||||||||||||
Sbjct: 53968 tttctactttattatagtat 53987
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>gb|AF418088.1| Leucaena confertiflora var. confertiflora clone a internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 526

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 tgcatccaaaatgactcttg 193
           ||||||||||||||||||||
Sbjct: 164 tgcatccaaaatgactcttg 183


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,546,340
Number of Sequences: 3902068
Number of extensions: 7546340
Number of successful extensions: 299292
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 298848
Number of HSP's gapped (non-prelim): 444
length of query: 630
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 607
effective length of database: 17,143,297,704
effective search space: 10405981706328
effective search space used: 10405981706328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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