>UVRD_MYCTU (P64320) Probable DNA helicase II homolog (EC 3.6.1.-)|
          Length = 700

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +3

Query: 162 AVQFLPCHRSH*QKQKNLRYGWSRVSANTNFFLQDSSIQV 281
           AVQ L  H +     + LRY WSRV A+T + L DS   V
Sbjct: 91  AVQALTFHAA---AYRQLRYFWSRVIADTGWQLLDSKFAV 127

>UVRD_MYCBO (P64321) Probable DNA helicase II homolog (EC 3.6.1.-)|
          Length = 700

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +3

Query: 162 AVQFLPCHRSH*QKQKNLRYGWSRVSANTNFFLQDSSIQV 281
           AVQ L  H +     + LRY WSRV A+T + L DS   V
Sbjct: 91  AVQALTFHAA---AYRQLRYFWSRVIADTGWQLLDSKFAV 127

>TBC15_MOUSE (Q9CXF4) TBC1 domain family member 15|
          Length = 671

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 191 TLTETKESPVW--LVACLSQYKLLPAGFFHTGASRLL 295
           ++ ++KE   W  LV CL    +LPA  FH G S+LL
Sbjct: 137 SVKQSKEGMGWSYLVFCLKDDVMLPALHFHQGDSKLL 173

>GLR13_ARATH (Q9FH75) Glutamate receptor 1.3 precursor (Ligand-gated ion channel|
           1.3)
          Length = 860

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = -2

Query: 346 RHLYGRNNNLEAPVW---KKQQP*GTCMEESCRKKFVLAETRDQPYRR 212
           RHL   +N LE  +W     Q P GT + +S RKK  +  T    + R
Sbjct: 405 RHLSSTHNKLETIIWPGGSAQSPKGTSLIDSDRKKLRVLVTSSNRFPR 452

>TBC15_HUMAN (Q8TC07) TBC1 domain family member 15|
          Length = 691

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 191 TLTETKESPVW--LVACLSQYKLLPAGFFHTGASRLL 295
           ++ + KE   W  LV CL    +LPA  FH G S+LL
Sbjct: 137 SIKQNKEGMGWSYLVFCLKDDVVLPALHFHQGDSKLL 173

>Y1119_SYNY3 (P73341) Hypothetical protein sll1119|
          Length = 361

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 240 ANTNFFLQDSSIQVPQGCCFFHTGAS 317
           A TN   +   I+VP+GC F+H G S
Sbjct: 49  ALTNLVFKHYDIEVPKGCRFWHRGLS 74

>APLP1_HUMAN (P51693) Amyloid-like protein 1 precursor (APLP) (APLP-1)|
           [Contains: C30]
          Length = 650

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
 Frame = +1

Query: 262 RILPYRCL--KVVVSSIQVPQGCCFFH 336
           +++P+RCL  + V  ++ VP+GC F H
Sbjct: 134 QVVPFRCLPGEFVSEALLVPEGCRFLH 160

>SAHH_BARQU (Q6G1D6) Adenosylhomocysteinase (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
          Length = 465

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = +1

Query: 184 IDHIDRNKR--ISGMVGRVSQPIQTSSCRILPYRCLKVVVSSIQVPQGCCFFHTGASRLL 357
           +DH+ + K   I G +G     IQ S+ R LP+  +K  V  +  P G         RLL
Sbjct: 319 LDHMRQVKDMCILGNIGHFDNEIQVSALRNLPWTNIKPQVDIVTFPDGKRIILLSEGRLL 378

Query: 358 S 360
           +
Sbjct: 379 N 379

>ISPH_SYNY3 (Q55643) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC|
           1.17.1.2)
          Length = 379

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 32  WNS*EEKEIEPHTSIIHPSYAQEK 103
           WNS E+ + + HTSIIH  Y  E+
Sbjct: 137 WNSVEKHKKKEHTSIIHGKYNHEE 160


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,262,961
Number of Sequences: 219361
Number of extensions: 1455497
Number of successful extensions: 3244
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3229
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)