Clone Name | rbasd20f22 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | emb|AJ277210.1|ASA277210 Avena sativa mRNA for chlorophyll synth... | 44 | 0.27 | 2 | gb|AE013059.1| Thermoanaerobacter tengcongensis MB4, section 86 ... | 40 | 4.2 | 3 | gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosom... | 40 | 4.2 |
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>emb|AJ277210.1|ASA277210 Avena sativa mRNA for chlorophyll synthase (chlG gene) Length = 1428 Score = 44.1 bits (22), Expect = 0.27 Identities = 22/22 (100%) Strand = Plus / Minus Query: 296 cgtcagtggctggtcgccaggg 317 |||||||||||||||||||||| Sbjct: 1139 cgtcagtggctggtcgccaggg 1118
>gb|AE013059.1| Thermoanaerobacter tengcongensis MB4, section 86 of 244 of the complete genome Length = 9205 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tacaggtacagcagcagaag 147 |||||||||||||||||||| Sbjct: 1380 tacaggtacagcagcagaag 1399
>gb|AC140331.2| Mus musculus BAC clone RP23-406J20 from chromosome 13, complete sequence Length = 192473 Score = 40.1 bits (20), Expect = 4.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 cttattccactaactgtgtt 233 |||||||||||||||||||| Sbjct: 84523 cttattccactaactgtgtt 84542 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,944,700 Number of Sequences: 3902068 Number of extensions: 1944700 Number of successful extensions: 39819 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39814 Number of HSP's gapped (non-prelim): 5 length of query: 317 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 295 effective length of database: 17,147,199,772 effective search space: 5058423932740 effective search space used: 5058423932740 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)