Clone Information

BLAST Search Result

Clone Name	rbasd20f16
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	NOP12_GIBZE (Q4IQW0) Nucleolar protein 12	39	0.013
2	ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2	36	0.064
3	RL19_SULAC (O05639) 50S ribosomal protein L19e	36	0.084
4	MNN4_YEAST (P36044) Protein MNN4	35	0.19
5	CCNL1_MOUSE (Q52KE7) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)	35	0.19
6	YMT4_YEAST (Q04213) Hypothetical 55.4 kDa protein in MCM1-NUP116...	34	0.24
7	ZIP1_YEAST (P31111) Synaptonemal complex protein ZIP1	34	0.32
8	DBP9_CRYNE (Q5K7L2) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)	34	0.32
9	BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	33	0.54
10	ABCF1_MOUSE (Q6P542) ATP-binding cassette sub-family F member 1	33	0.71
11	SULU_CAEEL (P46549) Serine/threonine-protein kinase SULU (EC 2.7...	33	0.71
12	CCNL1_RAT (Q9R1Q2) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)	33	0.71
13	SH2P1_HUMAN (Q6PD62) SH2 domain-binding protein 1	33	0.71
14	ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (EC 3.6.1.-) ...	33	0.71
15	ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (EC 3.6.1.-) ...	33	0.71
16	ATRX_HUMAN (P46100) Transcriptional regulator ATRX (EC 3.6.1.-) ...	33	0.71
17	CCNL1_HUMAN (Q9UK58) Cyclin-L1 (Cyclin-L)	32	0.93
18	LIPA1_HUMAN (Q13136) Liprin-alpha-1 (Protein tyrosine phosphatas...	32	0.93
19	PRP40_HUMAN (O75400) Pre-mRNA-processing factor 40 homolog A (Fo...	32	1.2
20	CF151_MOUSE (Q9D361) U11/U12 snRNP 48 kDa protein	32	1.2
21	ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3...	32	1.2
22	ABCF1_PANTR (Q7YR37) ATP-binding cassette sub-family F member 1 ...	32	1.2
23	Y208_ENCCU (Q8SWH4) Hypothetical protein ECU02_0080	32	1.6
24	NDF1_CHICK (P79765) Neurogenic differentiation factor 1 (NeuroD1...	32	1.6
25	SCG1_HUMAN (P05060) Secretogranin-1 precursor (Secretogranin I) ...	32	1.6
26	ESCO1_MOUSE (Q69Z69) N-acetyltransferase ESCO1 (EC 2.3.1.-) (Est...	32	1.6
27	ADCA_STRP8 (Q8P1N2) Zinc-binding protein adcA precursor	31	2.1
28	ADCA_STRP6 (Q5XD15) Zinc-binding protein adcA precursor	31	2.1
29	ADCA_STRP3 (Q8K847) Zinc-binding protein adcA precursor	31	2.1
30	CWC15_SCHPO (P78794) Pre-mRNA-splicing factor cwc15 (Complexed w...	31	2.1
31	CEC1_CAEEL (P34618) Chromo domain protein cec-1	31	2.1
32	NNP1_MOUSE (P56183) NNP-1 protein (Novel nuclear protein 1) (Nop52)	31	2.7
33	SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Ar...	31	2.7
34	ABCF1_HUMAN (Q8NE71) ATP-binding cassette sub-family F member 1 ...	31	2.7
35	JHD2C_HUMAN (Q15652) Probable JmjC domain-containing histone dem...	31	2.7
36	DRE2B_ARATH (O82133) Dehydration-responsive element-binding prot...	31	2.7
37	AB140_YEAST (Q08641) Actin-binding protein ABP140	31	2.7
38	PCF11_HUMAN (O94913) Pre-mRNA cleavage complex 2 protein Pcf11 (...	31	2.7
39	JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylatio...	31	2.7
40	SON_MOUSE (Q9QX47) SON protein	30	3.5
41	CWC27_GIBZE (Q4IPB3) Peptidyl-prolyl isomerase CWC27 (EC 5.2.1.8)	30	3.5
42	RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ...	30	3.5
43	ANR11_HUMAN (Q6UB99) Ankyrin repeat domain-containing protein 11...	30	3.5
44	SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory eleme...	30	3.5
45	SH2P1_MOUSE (Q62018) SH2 domain-binding protein 1 (Tetratricopep...	30	3.5
46	PKNX_STRCO (Q9XA16) Probable serine/threonine-protein kinase SCO...	30	3.5
47	T2FA_DROME (Q05913) Transcription initiation factor IIF alpha su...	30	3.5
48	IF2_CARHZ (Q3AB98) Translation initiation factor IF-2	30	3.5
49	RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-bindin...	30	4.6
50	CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 ...	30	4.6
51	LEGB_PEA (P14594) Legumin B [Contains: Legumin B alpha chain (Le...	30	4.6
52	RELA_STRCO (P52560) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ...	30	4.6
53	GOGA5_XENLA (Q6GNT7) Golgin subfamily A member 5 (Golgin-84)	30	4.6
54	TOP1_XENLA (P41512) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	30	4.6
55	K0690_CHICK (Q5ZKD5) Protein KIAA0690 homolog	30	4.6
56	NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neur...	30	6.0
57	SAS10_YEAST (Q12136) Something about silencing protein 10 (U3 sm...	30	6.0
58	TAF7_SCHPO (O13701) Transcription initiation factor TFIID subuni...	30	6.0
59	SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein...	30	6.0
60	YAB9_YEAST (P31380) Hypothetical 128.5 kDa ATP-dependent helicas...	30	6.0
61	TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnorm...	30	6.0
62	TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protei...	29	7.9
63	K0853_HUMAN (Q5T200) Protein KIAA0853	29	7.9
64	GOGA5_HUMAN (Q8TBA6) Golgin subfamily A member 5 (Golgin-84) (RE...	29	7.9
65	STK3_MOUSE (Q9JI10) Serine/threonine-protein kinase 3 (EC 2.7.11...	29	7.9
66	BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain ...	29	7.9
67	ROK1_SCHPO (Q09775) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)	29	7.9
68	BCA1_YEAST (P38891) Branched-chain-amino-acid aminotransferase, ...	29	7.9
69	KAD_SHEON (Q8EFF5) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp...	29	7.9
70	ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2	29	7.9
71	RENT2_HUMAN (Q9HAU5) Regulator of nonsense transcripts 2 (Nonsen...	29	7.9
72	KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase ty...	29	7.9
73	EIL3_ARATH (O23116) ETHYLENE-INSENSITIVE3-like 3 protein	29	7.9
74	BNI4_YEAST (P53858) Protein BNI4	29	7.9
75	VAC7_YEAST (P53950) Vacuolar segregation protein 7	29	7.9

>NOP12_GIBZE (Q4IQW0) Nucleolar protein 12|
          Length = 559

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
 Frame = -2

Query: 488 KQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQ--EIIKSKSMEAGPKRKRVATR 315
           + E ED+E +      G          +DE  K   ++  +II +   ++  +RKR    
Sbjct: 82  EDEDEDEENSEQEDGSGDEQEEEESEDVDETMKDAPVELDDIIDATEDKSNKERKRKRKN 141

Query: 314 KGAGIDSKQV-KNHHEEESEQEGTRQHNDSRPRTRRSCVDKE 192
               ++ K + K   EEE+++ G RQ ND+  +T +  VD+E
Sbjct: 142 DNDDLEGKYLDKVAAEEEADRAGKRQKNDALTKTEKPAVDEE 183

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>ARS2_HUMAN (Q9BXP5) Arsenite-resistance protein 2|
          Length = 876

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
 Frame = -2

Query: 377 QEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSR--PRTRRS- 207
           QE  + ++ + G   K+   R GAG+   + K + ++E +++G +  NDS    +T++S 
Sbjct: 270 QEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSE 329

Query: 206 -CVDKELMNKDIQKCGVSRTRKTNR 135
              DKE   +D +K     ++K NR
Sbjct: 330 GDGDKEEKKEDSEKEAKKSSKKRNR 354

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>RL19_SULAC (O05639) 50S ribosomal protein L19e|
          Length = 150

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = -2

Query: 428 NTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNH-HEEESEQE 252
           N  R+  ++E    +DI+++IK +++   PKR         GI S ++K   H+  S+ E
Sbjct: 25  NPERLEEVEEALTREDIKKLIKERAVIVNPKR---------GISSGRLKERKHKRRSKGE 75

Query: 251 GTRQHNDSRPRTRRSCVDKELMNKDIQK 168
           G R+H   + ++     DKE+    I+K
Sbjct: 76  G-RKHGSRKGKSGARTGDKEIWINKIRK 102

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>MNN4_YEAST (P36044) Protein MNN4|
          Length = 1178

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 27/139 (19%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
 Frame = -2

Query: 551  KKGIQ---KDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKD 381
            +KGIQ   KD     +  +  K +++    ++      ++ ++    +    +EE K K+
Sbjct: 1011 RKGIQMFDKDPIIVYEDYAYAKLLEERKRREKKKKEEEEKKKKEEEEKKKKEEEEKKKKE 1070

Query: 380  IQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCV 201
             +E  K K  E   K+K    +K    + K+ K   E++ ++EG +  N+     +    
Sbjct: 1071 EEE--KKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKNEDE 1128

Query: 200  DKELMNKDIQKCGVSRTRK 144
            +K+   ++ +K    + +K
Sbjct: 1129 EKKKNEEEEKKKQEEKNKK 1147

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>CCNL1_MOUSE (Q52KE7) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)|
          Length = 532

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
 Frame = -2

Query: 500 MKTIKQEPEDDE-----PNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPK 336
           +KT+K+EPED +     P   + K  +RS T R             +   +S+S    P+
Sbjct: 364 VKTVKKEPEDRQQASKSPYNGVRKDSKRSRTSR--------SASRSRSRTRSRSRSHSPR 415

Query: 335 RKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRP--RTRRSCVDKELMNKDIQKCG 162
           R     R  +G  S + ++     SE    R HN   P  + + +  D +  N+   K  
Sbjct: 416 RHYNNRRSRSGTYSSRSRSRSRSHSESP-RRHHNHGSPHLKAKHTREDLKSSNRHGHKRK 474

Query: 161 VSRTRKTNR 135
            SR+R  ++
Sbjct: 475 KSRSRSQSK 483

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>YMT4_YEAST (Q04213) Hypothetical 55.4 kDa protein in MCM1-NUP116 intergenic|
           region
          Length = 475

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
 Frame = -2

Query: 527 HGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSME 348
           +G   K    + +++E E++EP     +  R S+  R          K   E  KS+   
Sbjct: 173 YGSYGKPDEEEYVEEEEEENEPEKKAIRPTRSSSRQR---------QKRASETEKSEGGN 223

Query: 347 AGPKRKRV--ATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMN 183
           +  KRKRV  +TR+ A ID+ + +   EEE  QE  R+    R +T++  V K   N
Sbjct: 224 SN-KRKRVTRSTRQQA-IDASEEEEEEEEEKVQEAVRKR-PQRTKTKKVVVSKTKPN 277

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>ZIP1_YEAST (P31111) Synaptonemal complex protein ZIP1|
          Length = 875

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
 Frame = -2

Query: 551 KKGIQKDIHGQADKLSVMKTIKQEP---EDDEPNINMTKRGRRSNTGRIVHLDEEPKTKD 381
           K  ++K   G  + LS +KT+KQ+    + ++ +I   K   + N   +     E  TK+
Sbjct: 665 KNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLESL-----EEVTKN 719

Query: 380 IQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCV 201
           +Q+ ++S+  E   K K +          +++KNH   E  ++GT+         +++  
Sbjct: 720 LQQKVQSQKRELEQKIKEL----------EEIKNHKRNEPSKKGTQNFTKPSDSPKKNAT 769

Query: 200 DKEL 189
              L
Sbjct: 770 TSNL 773

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>DBP9_CRYNE (Q5K7L2) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)|
          Length = 627

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 20/63 (31%), Positives = 34/63 (53%)
 Frame = -2

Query: 326 VATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVSRTR 147
           VAT +GAG D+++ ++  +EESE EG    +D +    +   +KE   +     G S+ R
Sbjct: 331 VATDEGAGADAEEEEDVKQEESESEGEEDEDDDKEAEDK---EKEAKEEAKPAPGPSKRR 387

Query: 146 KTN 138
            T+
Sbjct: 388 ATS 390

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>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 984

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
 Frame = -2

Query: 491 IKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKR----V 324
           IKQEP+D    ++  +      +      DEE + ++ +E  + +  E   +R+R     
Sbjct: 536 IKQEPDDPSSQVSAPRAASEEASEVKARRDEEERERERREREREREKEKEKEREREKEKE 595

Query: 323 ATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPR 219
             ++      KQ ++  E ES+++   +H D R +
Sbjct: 596 KEKEREREKQKQKESEKERESKEKEKGKHEDGRKK 630

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>ABCF1_MOUSE (Q6P542) ATP-binding cassette sub-family F member 1|
          Length = 837

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
 Frame = -2

Query: 524 GQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEA 345
           G+ +KL   K  +Q+ +  +   + T++GRR        +D++   + + E +K  S+ A
Sbjct: 53  GEEEKLQKEKEQQQQQQQQKKKRD-TRKGRRKKD-----VDDDSDERVLMERLKQLSVPA 106

Query: 344 GPKRKRVAT--------RKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRR 210
             +   V           KG  +    +++  EEE E+E  R    ++P   R
Sbjct: 107 SDEEDEVPAPIPRGRKKAKGGNVFEALIQDDSEEEEEEEENRVLKPAKPEKNR 159

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>SULU_CAEEL (P46549) Serine/threonine-protein kinase SULU (EC 2.7.11.1)|
           (Protein kinase 18)
          Length = 982

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 3/128 (2%)
 Frame = -2

Query: 527 HGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSME 348
           HG          +   P   EP        +  ++  +    ++P    I+  +K   M 
Sbjct: 437 HGSVGASITAIAVNPTPSPSEPIPTSQPTSKSESSSILETAHDDPLDTSIRAPVKDLHMP 496

Query: 347 AGPKRKRVAT---RKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKD 177
               ++R+AT    K A + S+++ N  +EE  +E       S+ +  R    KEL   +
Sbjct: 497 HRAVKERIATLQNHKFATLRSQRIINQEQEEYTKENNMYEQMSKYKHLRQAHHKELQQFE 556

Query: 176 IQKCGVSR 153
            ++C + R
Sbjct: 557 -ERCALDR 563

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>CCNL1_RAT (Q9R1Q2) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)|
          Length = 527

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
 Frame = -2

Query: 500 MKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVA 321
           +KT+K+EPED +        G R ++ R  +     +++      +S+S    P+R    
Sbjct: 359 VKTVKKEPEDRQQASKSPYNGVRKDSKRSRNSRSASRSR---SRTRSRSRSHTPRRHYNN 415

Query: 320 TRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRP--RTRRSCVDKELMNKDIQKCGVSRTR 147
            R  +G  S + ++     SE    R HN   P  + + +  D +  N+   K   SR+R
Sbjct: 416 RRSRSGTYSSRSRSRSRSHSESP-RRHHNHGSPHLKAKHTREDLKSSNRHGHKRKKSRSR 474

Query: 146 KTNR 135
             ++
Sbjct: 475 SQSK 478

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>SH2P1_HUMAN (Q6PD62) SH2 domain-binding protein 1|
          Length = 1173

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
 Frame = -2

Query: 488  KQEPEDDEPNINMTKRGRRSNTGRIVHLDEE------PKTKDIQEIIKSKSMEAGPKRKR 327
            +QE ED+E      K+ RR   G     D+E      PK +   +  K K+    PK +R
Sbjct: 944  EQEGEDEEGGERKKKKRRRHPKGEEGSDDDETENGPKPKKRRPPKAEKKKA----PKPER 999

Query: 326  VATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVSRT 150
            +       I SK + +  ++ S+++  +  ++  PR   S  D +  ++  +KC  S +
Sbjct: 1000 LPPSMKGKIKSKAIISSSDDSSDEDKLKIADEGHPRNSNSNSDSD-EDEQRKKCASSES 1057

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>ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked helicase II) (X-linked nuclear
            protein) (XNP)
          Length = 2492

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 22/106 (20%), Positives = 45/106 (42%)
 Frame = -2

Query: 473  DDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDS 294
            DDEP     + G+++        +E P  ++ +  + S+S     + K+   R       
Sbjct: 1293 DDEPEEGKKRTGKQN--------EENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHK 1344

Query: 293  KQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVS 156
              V +    E ++   ++H + + R RR    ++  + D Q+ GVS
Sbjct: 1345 LTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVS 1390

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>ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked helicase II) (X-linked nuclear
            protein) (XNP)
          Length = 2492

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 22/106 (20%), Positives = 45/106 (42%)
 Frame = -2

Query: 473  DDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDS 294
            DDEP     + G+++        +E P  ++ +  + S+S     + K+   R       
Sbjct: 1293 DDEPEEGKKRTGKQN--------EENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHK 1344

Query: 293  KQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVS 156
              V +    E ++   ++H + + R RR    ++  + D Q+ GVS
Sbjct: 1345 LTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVS 1390

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>ATRX_HUMAN (P46100) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent|
            helicase ATRX) (X-linked helicase II) (X-linked nuclear
            protein) (XNP) (Znf-HX)
          Length = 2492

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 22/106 (20%), Positives = 45/106 (42%)
 Frame = -2

Query: 473  DDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDS 294
            DDEP     + G+++        +E P  ++ +  + S+S     + K+   R       
Sbjct: 1293 DDEPEEGKKRTGKQN--------EENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHK 1344

Query: 293  KQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVS 156
              V +    E ++   ++H + + R RR    ++  + D Q+ GVS
Sbjct: 1345 LTVSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVS 1390

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>CCNL1_HUMAN (Q9UK58) Cyclin-L1 (Cyclin-L)|
          Length = 526

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
 Frame = -2

Query: 500 MKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVA 321
           +KT+K+EPED +        G R ++ R  +     +++      +S+S    P+R    
Sbjct: 358 VKTVKKEPEDRQQASKSPYNGVRKDSKRSRNSRSASRSR---SRTRSRSRSHTPRRHYNN 414

Query: 320 TRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRP--RTRRSCVDKELMNKDIQKCGVSRTR 147
            R  +G  S + ++     SE    R HN   P  + + +  D +  N+   K   SR+R
Sbjct: 415 RRSRSGTYSSRSRSRSRSHSESP-RRHHNHGSPHLKAKHTRDDLKSSNRHGHKRKKSRSR 473

Query: 146 KTNR 135
             ++
Sbjct: 474 SQSK 477

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>LIPA1_HUMAN (Q13136) Liprin-alpha-1 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-1)
           (PTPRF-interacting protein alpha-1) (LAR-interacting
           protein 1) (LIP.1)
          Length = 1202

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 23/91 (25%), Positives = 41/91 (45%)
 Frame = -2

Query: 440 GRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEES 261
           G+RS+ G + H ++  K  ++QEII  +S E    ++R+A+          + +H  E  
Sbjct: 235 GKRSSDGSLSHEEDLAKVIELQEIISKQSREQSQMKERLAS----------LSSHVTELE 284

Query: 260 EQEGTRQHNDSRPRTRRSCVDKELMNKDIQK 168
           E   T          R+  +  E MN  +Q+
Sbjct: 285 EDLDT---------ARKDLIKSEEMNTKLQR 306

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>PRP40_HUMAN (O75400) Pre-mRNA-processing factor 40 homolog A (Formin-binding|
            protein 3) (Huntingtin yeast partner A)
            (Huntingtin-interacting protein HYPA/FBP11) (Fas
            ligand-associated factor 1) (NY-REN-6 antigen)
          Length = 957

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 21/99 (21%), Positives = 45/99 (45%)
 Frame = -2

Query: 473  DDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDS 294
            DD+ + +  KR R  +     H       +  ++  K K  +   KR+  +    +  + 
Sbjct: 835  DDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHK--KKSKKRRHKSDSPESDAER 892

Query: 293  KQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKD 177
            ++ K   + ESE++ TRQ ++S+ ++ +    K+  N D
Sbjct: 893  EKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWD 931

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>CF151_MOUSE (Q9D361) U11/U12 snRNP 48 kDa protein|
          Length = 337

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
 Frame = -2

Query: 446 KRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEE 267
           KR R+S   + VH+ ++  T+ I+++IK    E     +    R G   +  + +     
Sbjct: 219 KRRRQSYRAKNVHITKKSYTEVIRDVIKVHMEELSSHWQEEQGRAGDAAEKNEERRSASV 278

Query: 266 ESEQEGTRQHNDSRPRTRRS---CVDKELMNKDIQKCGVSRTRK 144
           +S Q G    +    R RR+      K   NKD  K   SR RK
Sbjct: 279 DSRQSGGSYLDVESSRHRRARSRSPHKRKRNKD--KSSESRRRK 320

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>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3.6.1.-)|
           (ATP-dependent helicase xnp-1) (X-linked nuclear protein
           1)
          Length = 1359

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 26/127 (20%), Positives = 55/127 (43%), Gaps = 18/127 (14%)
 Frame = -2

Query: 497 KTIKQEPEDDEPNINMTKRGRRSNTG--RIVHLDEEPKTKDIQEIIKSK----------- 357
           K++K+  E  E +    K  ++S  G  +    + E +++D +E+ KSK           
Sbjct: 174 KSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKES 233

Query: 356 -SMEAGPKRKRVATRKGAGIDSKQV----KNHHEEESEQEGTRQHNDSRPRTRRSCVDKE 192
            S +  P++K+   RK +   S++     K+  EEE ++   +         ++   D+E
Sbjct: 234 ESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEE 293

Query: 191 LMNKDIQ 171
               D++
Sbjct: 294 SEESDVE 300



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
 Frame = -2

Query: 554 KKKGIQKDIHGQADKLSVMK--TIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKD 381
           KK   +K +  +  + S  K  T   E ED +       + +   T +    +   ++++
Sbjct: 102 KKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESSEESEE 161

Query: 380 IQEIIKSKSMEAGPKRKRVATRKGAGIDSK---------QVKNHHEEESEQEGTRQHNDS 228
            +++ KSK  +    +KR  T + +  D K         + K   E ESE E  ++   S
Sbjct: 162 ERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKS 221

Query: 227 RPRTRRSCVDKELMNKD 177
           + ++++  V KE  ++D
Sbjct: 222 KKKSKK-VVKKESESED 237



 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/114 (15%), Positives = 53/114 (46%)
 Frame = -2

Query: 476 EDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGID 297
           EDD+      ++  + +  R     E  ++ + ++  KSKS +   ++K+  ++K     
Sbjct: 66  EDDDDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTS 125

Query: 296 SKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVSRTRKTNR 135
           S + ++  +EE EQ+  ++   ++ +T     ++    + ++K   ++ +   +
Sbjct: 126 SSEDED-SDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKK 178

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>ABCF1_PANTR (Q7YR37) ATP-binding cassette sub-family F member 1 (ATP-binding|
           cassette 50)
          Length = 807

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 23/109 (21%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
 Frame = -2

Query: 554 KKKGIQKDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQ 375
           K+ G ++ +  + ++    + ++Q+ + D      T++GRR        +D++ + K++ 
Sbjct: 50  KQAGEEEKVLKEKEQQQQQQQVQQKKKRD------TRKGRRKKD-----VDDDGEEKELM 98

Query: 374 EIIKSKSMEAG--------PKRKRVATRKGAGIDSKQVKNHHEEESEQE 252
           E +K  S+ A         PK +     KG  + +  +++  EEE E+E
Sbjct: 99  ERLKKLSVPASDEEDEVPAPKPRGGKKTKGGNVFAALIQDQSEEEEEEE 147

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>Y208_ENCCU (Q8SWH4) Hypothetical protein ECU02_0080|
          Length = 579

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
 Frame = -2

Query: 521 QADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEI-----IKSK 357
           +  K  + K++K+   D+E      KRG+R + G     +EE K  + +E+      +  
Sbjct: 305 ERQKREIEKSMKELLRDEE-KAKSKKRGKRKSVGVSGAKEEEKKESETEEVEAGEEAEMP 363

Query: 356 SMEAGPKRKRVATRKGAGIDSKQVKNH 276
           S+E G  R++  T K +  D K++K H
Sbjct: 364 SVEVGGARRK--TGKKSEGDQKRLKIH 388

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>NDF1_CHICK (P79765) Neurogenic differentiation factor 1 (NeuroD1) (NeuroD)|
          Length = 357

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 22/102 (21%), Positives = 47/102 (46%)
 Frame = -2

Query: 554 KKKGIQKDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQ 375
           KK+   + +HG+A++   ++  ++E E+DE                   LDEE + ++ +
Sbjct: 38  KKEEDLEALHGEAEE-DALRNGEEEDEEDE-------------------LDEEEEEEEEE 77

Query: 374 EIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEG 249
           E  + K    GPK+K++   +      +++K +  E +   G
Sbjct: 78  EDDEQKPKRRGPKKKKMTKARLERFKLRRMKANARERNRMHG 119

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>SCG1_HUMAN (P05060) Secretogranin-1 precursor (Secretogranin I) (SgI)|
           (Chromogranin B) (CgB) [Contains: GAWK peptide; CCB
           peptide]
          Length = 677

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 22/79 (27%), Positives = 37/79 (46%)
 Frame = -2

Query: 488 KQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKG 309
           ++E E++E   N  K  R  ++    HL+E  +T++   + + K   A  K + VA  + 
Sbjct: 161 QREDEEEEEGENYQKGERGEDSSEEKHLEEPGETQNAF-LNERKQASAIKKEELVARSET 219

Query: 308 AGIDSKQVKNHHEEESEQE 252
                 Q K H  E+S QE
Sbjct: 220 HAAGHSQEKTHSREKSSQE 238

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>ESCO1_MOUSE (Q69Z69) N-acetyltransferase ESCO1 (EC 2.3.1.-) (Establishment of|
           cohesion 1 homolog 1) (ECO1 homolog 1)
          Length = 843

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 3/121 (2%)
 Frame = -2

Query: 554 KKKGIQKDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTK--- 384
           KK  ++K  H Q    +    I      +  +    ++  +S  G I+ L EE   +   
Sbjct: 260 KKNELRKSAHTQVSTSTKRPQIPLPLVPEHSDDQELEQAGKSKRGSILQLCEEIAGEIES 319

Query: 383 DIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSC 204
           D  E+ K  S     K ++ A  K  G D+++   HH+E ++   + +   SR      C
Sbjct: 320 DTVEVKKESSCVESVKEEKPAEVKLQGTDAERQILHHKEANQDVRSNRFFPSRKTKPVKC 379

Query: 203 V 201
           V
Sbjct: 380 V 380

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>ADCA_STRP8 (Q8P1N2) Zinc-binding protein adcA precursor|
          Length = 515

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
 Frame = -2

Query: 536 KDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKT--KDIQEIIK 363
           K + G    +S++     EP D EP+    K+ + ++    V++D+  +T   D+++ + 
Sbjct: 46  KGVIGNDGDVSMLMKAGTEPHDFEPSTKDIKKIQDADA--FVYMDDNMETWVSDVKKSLT 103

Query: 362 SKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHND 231
           SK +        +    GAG D     +HHE+  ++    +H++
Sbjct: 104 SKKVTIVKGTGNMLLVAGAGHD-----HHHEDADKKHEHNKHSE 142

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>ADCA_STRP6 (Q5XD15) Zinc-binding protein adcA precursor|
          Length = 515

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
 Frame = -2

Query: 536 KDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKT--KDIQEIIK 363
           K + G    +S++     EP D EP+    K+ + ++    V++D+  +T   D+++ + 
Sbjct: 46  KGVIGNDGDVSMLMKAGTEPHDFEPSTKDIKKIQDADA--FVYMDDNMETWVSDVKKSLT 103

Query: 362 SKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHND 231
           SK +        +    GAG D     +HHE+  ++    +H++
Sbjct: 104 SKKVTIVKGTGNMLLVAGAGHD-----HHHEDADKKHEHNKHSE 142

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>ADCA_STRP3 (Q8K847) Zinc-binding protein adcA precursor|
          Length = 515

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
 Frame = -2

Query: 536 KDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKT--KDIQEIIK 363
           K I G    +S++     EP D EP+    K+ + ++    V++D+  +T   D+++ + 
Sbjct: 46  KGIVGNDGDVSMLMKAGTEPHDFEPSTKDIKKIQDADA--FVYMDDNMETWVSDVKKSLT 103

Query: 362 SKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHND 231
           SK +        +    G G D     +HHEE  ++    +H++
Sbjct: 104 SKKVTIVKGTGNMLLVAGVGHD-----HHHEEADKKHEHNKHSE 142

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>CWC15_SCHPO (P78794) Pre-mRNA-splicing factor cwc15 (Complexed with cdc5|
           protein 15) (Cell cycle control protein cwf15)
          Length = 265

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
 Frame = -2

Query: 473 DDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDS 294
           DD+PN N  +   +    + +  DE+    D      +K+ E   KR++  +     +DS
Sbjct: 93  DDKPN-NDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDS 151

Query: 293 KQVKNHHEEESEQEGTRQ-----HNDSRPRTRRSCVDKE 192
              ++  EE   ++ T+Q      N  + R R   + +E
Sbjct: 152 SNSESSDEESDSEDETQQLLRELENIKQERKREQMLQEE 190

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>CEC1_CAEEL (P34618) Chromo domain protein cec-1|
          Length = 304

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
 Frame = -2

Query: 527 HGQADKLSVMKTIKQEPEDDEPNINMTKR--GRRSNTGRIVHLDEEPKTKDIQEIIKSKS 354
           H  ADK S  +  ++E EDDE  +   K+           V  ++E ++++++++ + + 
Sbjct: 132 HSSADKKSKAED-EEEVEDDEEPVPKKKKEVQEEPEEEESVEGEDEEESQEVEDLKEDEK 190

Query: 353 MEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDI 174
           ME   K +    +  +    K  K   EE+ E++   +  +     +   V+K ++   I
Sbjct: 191 MEEDEKEEEEDVQLES---EKNEKEEEEEKVEEKKEEEEEEEEEEIQLVIVEKTVIETTI 247

Query: 173 QKCGVS 156
            +  V+
Sbjct: 248 VEPAVA 253

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>NNP1_MOUSE (P56183) NNP-1 protein (Novel nuclear protein 1) (Nop52)|
          Length = 494

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = -2

Query: 479 PEDDEPNINMTK--RGRRSNTGRIVHLDE-EPKTKDIQEIIKSKSMEAGPKRKRVATRK 312
           PEDD P     K   GRR    +   L + +P+ K+     +S S + GP RKR   RK
Sbjct: 396 PEDDVPEKAYKKMLEGRRERKKKKKRLPKPQPQNKEAGSEAESSSADPGPGRKRKRNRK 454

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>SFR11_HUMAN (Q05519) Splicing factor arginine/serine-rich 11 (Arginine-rich 54|
           kDa nuclear protein) (p54)
          Length = 484

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
 Frame = -2

Query: 554 KKKGIQKDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVH-----LDEEPK 390
           K+K   KD     D+     + K++ +D E +     R R+S + + V       DEE +
Sbjct: 376 KEKKKDKDKERSRDERERSTSKKKKSKDKEKD-----RERKSESDKDVKQVTRDYDEEEQ 430

Query: 389 TKDIQEIIKS--KSMEAG-PKRKRVATRKGAGIDSKQVK----NHHEEESE 258
             D ++  K   K +E G PK K  +  KG G   ++ K    +HHEE+ +
Sbjct: 431 GYDSEKEKKEEKKPIETGSPKTKECSVEKGTGDSLRESKVNGDDHHEEDMD 481

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>ABCF1_HUMAN (Q8NE71) ATP-binding cassette sub-family F member 1 (ATP-binding|
           cassette 50) (TNF-alpha-stimulated ABC protein)
          Length = 845

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
 Frame = -2

Query: 497 KTIKQEPEDDEPNINMTKRGRRSNTGRIVH-LDEEPKTKDIQEIIKSKSMEAG------- 342
           K +K++ +  +      K+ R +  GR    +D++ + K++ E +K  S+          
Sbjct: 57  KVLKEKEQQQQQQQQQQKKKRDTRKGRRKKDVDDDGEEKELMERLKKLSVPTSDEEDEVP 116

Query: 341 -PKRKRVATRKGAGIDSKQVKNHHEEESEQE 252
            PK +     KG  + +  +++  EEE E+E
Sbjct: 117 APKPRGGKKTKGGNVFAALIQDQSEEEEEEE 147

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>JHD2C_HUMAN (Q15652) Probable JmjC domain-containing histone demethylation|
           protein 2C (EC 1.14.11.-) (Jumonji domain-containing
           protein 1C) (Thyroid receptor-interacting protein 8)
           (TRIP-8)
          Length = 2540

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 18/79 (22%), Positives = 41/79 (51%)
 Frame = -2

Query: 488 KQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKG 309
           +++PE+DE  +NM    +R  T  +    E   +++  + I   S E  P+ + +  +  
Sbjct: 352 RRKPEEDEKKLNM----KRLRTDNVSDFSESSDSENSNKRIIDNSSEQKPENE-LKNKNT 406

Query: 308 AGIDSKQVKNHHEEESEQE 252
           + I+ ++ K H+ E++ +E
Sbjct: 407 SKINGEEGKPHNNEKAGEE 425

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>DRE2B_ARATH (O82133) Dehydration-responsive element-binding protein 2B (DREB2B|
           protein)
          Length = 330

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 446 KRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGA 306
           KR  R+  G +   D   K K+  EI+++ +++ G K KR    KG+
Sbjct: 14  KRKSRARAGGLTVADRLKKWKEYNEIVEASAVKEGEKPKRKVPAKGS 60

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>AB140_YEAST (Q08641) Actin-binding protein ABP140|
          Length = 627

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/97 (22%), Positives = 42/97 (43%)
 Frame = -2

Query: 524 GQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEA 345
           G AD +   ++I +E  D   + N + +  +SN      L ++  T   QE+  ++  E 
Sbjct: 1   GVADLIKKFESISKEEGDATVDTNSSSKPLKSND-ETKELHQQESTAVPQEVDVNEEFEN 59

Query: 344 GPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHN 234
            P+    +      +++   K    EE E+EG+   N
Sbjct: 60  EPETINSSRTAEKPLETNLPKPETNEEDEEEGSMSEN 96

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>PCF11_HUMAN (O94913) Pre-mRNA cleavage complex 2 protein Pcf11 (Pre-mRNA|
           cleavage complex II protein Pcf11) (Fragment)
          Length = 1654

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 10/126 (7%)
 Frame = -2

Query: 554 KKKGIQKDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRR-------SNTGRIVHLDEE 396
           K K   K      +KLS  K +K +  +     +M KR  R          G+   + E+
Sbjct: 462 KSKSKSKSPSPLKNKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVKEK 521

Query: 395 PKT---KDIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSR 225
            KT   KD  E +KS        R ++      GI  KQ  +   EESE++GT+    S 
Sbjct: 522 RKTAEKKDKDEHMKSSEHRLAGSRNKIIN----GIVQKQ--DTITEESEKQGTKPGRSST 575

Query: 224 PRTRRS 207
            +  RS
Sbjct: 576 RKRSRS 581

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>JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10) (F-box protein FBL10)
          Length = 1309

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
 Frame = -2

Query: 515  DKLSV----MKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSME 348
            D+LS+    ++  KQEPEDD P      + R S+  R       P T+  +   + K ++
Sbjct: 850  DRLSLANKPLRRFKQEPEDDLP--EAPPKTRESDQSRSSSPTAGPSTEGAEGPEEKKKVK 907

Query: 347  AGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRP 222
               +RKR    K    +  +  NH  E  + E T  H   +P
Sbjct: 908  M--RRKRRLVNKELSKELSKELNH--EIQKTESTLAHESQQP 945

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>SON_MOUSE (Q9QX47) SON protein|
          Length = 2404

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
 Frame = -2

Query: 485  QEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQ---EIIKSKSMEAGPKRKRVATR 315
            +E +D E  + +     +S   +     E+ K +D        +SKS E   +++   +R
Sbjct: 1770 EEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESR 1829

Query: 314  KGAGIDSKQVKNHHEE-ESEQEGTRQHNDSRPRTR---RSCVDKELMNKDIQKCGVSRTR 147
              A   S + K+H  +  S     R+   SR R++   R  V KE   +  +    SR R
Sbjct: 1830 SRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRER 1889

Query: 146  KTNR 135
            K  R
Sbjct: 1890 KRKR 1893

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>CWC27_GIBZE (Q4IPB3) Peptidyl-prolyl isomerase CWC27 (EC 5.2.1.8)|
          Length = 548

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 14/114 (12%)
 Frame = -2

Query: 491 IKQEPEDDEPN-----------INMTKRGRRSNTGRIVHLDE---EPKTKDIQEIIKSKS 354
           +K E ED+ P             N      +++  R +H +E   E K   ++ +I   S
Sbjct: 316 VKMEIEDESPEPEAPRKTALERANEEMAALKASMRRTIHSEEPVKEKKKSALESMIPETS 375

Query: 353 MEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKE 192
           M  G KR+  A    A  D+K ++     +S  E      ++ P  R +  D E
Sbjct: 376 MR-GRKRRPGAANTSAADDAKALRMLKAFQSRLEKAPPEKENEPAARETTKDGE 428

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>RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 841

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/77 (29%), Positives = 34/77 (44%)
 Frame = -2

Query: 440 GRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEES 261
           G R N GR+V L+      D+ E+  SK+  AGP R  +   K     +K ++    +E 
Sbjct: 536 GARVN-GRLVPLESTLDNGDLVEVFTSKAAGAGPSRDWLGFVKSPRARNK-IRAWFSKER 593

Query: 260 EQEGTRQHNDSRPRTRR 210
             E   Q  D+  R  R
Sbjct: 594 RDEAIEQGKDAIARAMR 610

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>ANR11_HUMAN (Q6UB99) Ankyrin repeat domain-containing protein 11 (Ankyrin|
            repeat-containing cofactor 1)
          Length = 2664

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 21/79 (26%), Positives = 34/79 (43%)
 Frame = -2

Query: 404  DEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSR 225
            D   K+ D Q   + K  E   +RK            ++V   H+E+ ++E T ++ D  
Sbjct: 1163 DRHRKSSDKQHPERQKDKEPRDRRKDRGAADAGRDKKEKVFEKHKEKKDKESTEKYKD-- 1220

Query: 224  PRTRRSCVDKELMNKDIQK 168
             R  R+ VD     K+ QK
Sbjct: 1221 -RKDRASVDSTQDKKNKQK 1238

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>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding|
            protein) (NRE-binding protein) (DBP-5) (Bax antagonist
            selected in saccharomyces 1) (BASS1)
          Length = 2426

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
 Frame = -2

Query: 485  QEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQ---EIIKSKSMEAGPKRKRVATR 315
            +E +D E  + +     +S   +     E+ K +D        +SKS E   +++   +R
Sbjct: 1785 EEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESR 1844

Query: 314  KGAGIDSKQVKNHHEE-ESEQEGTRQHNDSRPRTR---RSCVDKELMNKDIQKCGVSRTR 147
              A   S + K+H  +  S     R+   SR R++   R  V KE   +  +    SR R
Sbjct: 1845 SRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRER 1904

Query: 146  KTNR 135
            K  R
Sbjct: 1905 KRKR 1908

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>SH2P1_MOUSE (Q62018) SH2 domain-binding protein 1 (Tetratricopeptide|
            repeat-containing, SH2-binding phosphoprotein of 150 kDa)
            (TPR-containing, SH2-binding phosphoprotein of 150 kDa)
            (p150TSP)
          Length = 1173

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
 Frame = -2

Query: 488  KQEPEDDEPNINMTKRGRRSNTGRIVHLDEE------PKTKDIQEIIKSKSMEAGPKRKR 327
            +QE E++E      KR RR   G     +EE      PK +      K K+    PK +R
Sbjct: 944  EQEGEEEEGGERKKKRRRRPPKGEEGSEEEETENGPKPKKRRPPRAEKKKA----PKPER 999

Query: 326  VATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKE 192
            +       I SK + +  ++ S+++  +  ++  PR   S  D +
Sbjct: 1000 LPPSMKGKIKSKAIISSSDDSSDEDKLKIADEGHPRNSNSDSDDD 1044

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>PKNX_STRCO (Q9XA16) Probable serine/threonine-protein kinase SCO3848 (EC|
           2.7.11.1)
          Length = 673

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
 Frame = -2

Query: 545 GIQK-DIHGQADKLSVMKTIKQEPEDDEPNINM----TKRGR---RSNTGRIVHLDEEPK 390
           G+ K D   QAD + ++ T KQ+  +D+P  N+     K+G    + +T  +V     PK
Sbjct: 390 GLSKADAQQQADNIDLVLTFKQQECEDQPKGNICAQDPKQGTDVDKESTVNLVVSTGAPK 449

Query: 389 TKDIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGT 246
              +  +I     EA    K+    KG  +++KQ      E S+ EGT
Sbjct: 450 VA-VPNVIDKNIDEA----KKQLEDKGFEVETKQT-----ESSQDEGT 487

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>T2FA_DROME (Q05913) Transcription initiation factor IIF alpha subunit (EC|
           2.7.11.1) (TFIIF-alpha) (Transcription factor 5 large
           chain) (TF5A)
          Length = 577

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 28/125 (22%), Positives = 54/125 (43%)
 Frame = -2

Query: 542 IQKDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIK 363
           + KD+ G A++ ++ K +  + E+D+         ++S+       D E K KD     K
Sbjct: 323 VDKDMKGVAEEDALRKLLTSDEEEDDE--------KKSDESDKEDADGEKKKKD-----K 369

Query: 362 SKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMN 183
            K   +  K+K+  T+     D K+ K++   +S  + +    DS          K+++ 
Sbjct: 370 GKDEVSKDKKKKKPTK-----DDKKGKSNGSGDSSTDFSSDSTDSEDDLSNGPPKKKVVV 424

Query: 182 KDIQK 168
           KD  K
Sbjct: 425 KDKDK 429

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>IF2_CARHZ (Q3AB98) Translation initiation factor IF-2|
          Length = 827

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
 Frame = -2

Query: 371 IIKSKSMEAGPKRKRVATRKGAG--IDSKQVKNHHEEESEQEGTRQHNDSRPRTRRS 207
           ++K+ + E   K K+   +K      +++++++H +   EQ+ ++Q   SRPR +RS
Sbjct: 46  LLKALNREKEEKEKKEQEKKQVEQKAEAQKLQSHPQRPKEQQQSKQGGQSRPREQRS 102

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>RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-binding motif protein|
           25) (RNA-binding region-containing protein 7) (Protein
           S164)
          Length = 784

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/97 (23%), Positives = 50/97 (51%)
 Frame = -2

Query: 482 EPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAG 303
           E E+D+ ++   +  +  +T + +  ++  K K+ QEI K +  E   +R+R   R+   
Sbjct: 209 EMEEDKRDLISREISKFRDTHKKLEEEKGKKEKERQEIEKER-RERERERERERERRERE 267

Query: 302 IDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKE 192
            + ++ +   E+E E+E  R+ +  R RT+    D++
Sbjct: 268 RE-REREREREKEKERERERERDRDRDRTKERDRDRD 303

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>CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)|
           (ATP-dependent helicase CHD3) (CHD-3) (Mi-2 autoantigen
           240 kDa protein) (Mi2-alpha) (Zinc-finger helicase)
           (hZFH)
          Length = 2000

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 317 RKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVD 198
           ++G   ++K+ +  +EEE E+EG ++  D      R C D
Sbjct: 425 KEGVQWEAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKD 464

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>LEGB_PEA (P14594) Legumin B [Contains: Legumin B alpha chain (Legumin B|
           acidic chain); Legumin B beta chain (Legumin B basic
           chain)] (Fragment)
          Length = 338

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 22/88 (25%), Positives = 45/88 (51%)
 Frame = -2

Query: 488 KQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKG 309
           K++ ++DE      ++  R ++ +    ++EP++ + +   K K   A  KR+      G
Sbjct: 80  KEDEDEDEEEEEEREQRHRKHSEKEEEDEDEPRSYETRR--KWKKHTAEKKRES----HG 133

Query: 308 AGIDSKQVKNHHEEESEQEGTRQHNDSR 225
            G + ++++   EEE E+E  RQH+  R
Sbjct: 134 QGEEEEELEK--EEEEEEEIQRQHSKGR 159

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>RELA_STRCO (P52560) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 847

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 23/77 (29%), Positives = 34/77 (44%)
 Frame = -2

Query: 440 GRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEES 261
           G R N GR+V L+      D+ E+  SK+  AGP R  +   K     +K ++    +E 
Sbjct: 540 GARVN-GRLVPLESTLDNGDLVEVFTSKAAGAGPSRDWLGFVKSPRARNK-IRAWFSKER 597

Query: 260 EQEGTRQHNDSRPRTRR 210
             E   Q  D+  R  R
Sbjct: 598 RDEAIEQGKDAIVRAMR 614

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>GOGA5_XENLA (Q6GNT7) Golgin subfamily A member 5 (Golgin-84)|
          Length = 722

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
 Frame = -2

Query: 410 HLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVK----NHHEEESEQEGTR 243
           H++E+ K+ D+Q+ +K+  +     ++ +A  K       Q K    N  +E S  EG  
Sbjct: 391 HMEEKRKSDDLQQQLKTSKVGLDSLKQEMADYKQKATRILQSKEKLINSLKEGSGIEGLD 450

Query: 242 QHNDSRPRTRRSCVDKELMNKDIQK 168
            H+ S         ++++  ++IQK
Sbjct: 451 SHSASTMELEEMRHERDMQREEIQK 475

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>TOP1_XENLA (P41512) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 829

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 11/98 (11%)
 Frame = -2

Query: 491 IKQEPEDD----EPNINMTKRGRRSNTGRIVHLDEEPKTKDIQ-------EIIKSKSMEA 345
           +K EPED      P  N   +  R +       DE+ K K I+       +  K +  + 
Sbjct: 179 VKDEPEDQGFYVSPKENKAMKRPRED-------DEDYKPKKIKSEDDKKGKKRKQEEEDI 231

Query: 344 GPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHND 231
            PK+K  A     G+  K+VK   EE+ +     +H D
Sbjct: 232 KPKKKSKAKGNEEGVKKKKVKKEEEEKWKWWEEERHRD 269

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>K0690_CHICK (Q5ZKD5) Protein KIAA0690 homolog|
          Length = 1294

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
 Frame = -2

Query: 548  KGIQKDIH------GQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEP 393
            KG+++++       G   K S  +  ++EP+DDEP      + R   +G    LD++P
Sbjct: 1167 KGVEEEVADVLQEVGLRSKKSQKRRFREEPDDDEPETGTYSQYRAGGSGIHRPLDKKP 1224

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>NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neurofilament|
            protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1090

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
 Frame = -2

Query: 554  KKKGIQKDIHGQADKLSVMKTIKQE-----PEDDEPNINMTKRGRRSNTGRIVHLDEEPK 390
            KK+ ++  +  +       K +++E     P+ +       +  + +   ++    E P 
Sbjct: 882  KKEEVKSPVKEEVKAKEPPKKVEEEKTLPTPKTEAKESKKDEAPKEAPKPKVEEKKETPT 941

Query: 389  TKDIQEIIKSKSMEAGPKRKRVATRK------GAGIDSKQVKNHHEEESEQEGTRQHNDS 228
             K      ++K  EAG K+K VA+ +      G   ++K  +     ++E E T+    S
Sbjct: 942  EKPKDSTAEAKKEEAGEKKKAVASEEETPAKLGVKEEAKPKEKTETTKTEAEDTKAKEPS 1001

Query: 227  RP 222
            +P
Sbjct: 1002 KP 1003

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>SAS10_YEAST (Q12136) Something about silencing protein 10 (U3 small nucleolar|
           RNA-associated protein 3) (U3 snoRNA-associated protein
           11)
          Length = 610

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = -2

Query: 338 KRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGV 159
           +++ +    GA +D K   +  E  S    T+  ND   + +R   DK++  K+  K  V
Sbjct: 458 RKRGMHDNNGADLDDKDYGSEDEAVSRSINTQGENDYYQQVQRGKQDKKISRKEAHKNAV 517

Query: 158 SRTRK 144
              R+
Sbjct: 518 IAARE 522

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>TAF7_SCHPO (O13701) Transcription initiation factor TFIID subunit 7|
           (Transcription initiation factor TFIID 55 kDa subunit)
           (TAFII-55)
          Length = 393

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
 Frame = -2

Query: 407 LDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDS 228
           +DE+     I++ +   S +    R+  A  + AG +S   +   EEE E+E     +++
Sbjct: 274 MDEDDLAGQIEQGMLELSQDT---RESTAEPRAAGEESASEEEEEEEEEEEEENEADDET 330

Query: 227 RPRTRRSCVDKELMNK---DIQKCGVSRTRKTN 138
           R   R++ + +E +++    IQK        TN
Sbjct: 331 RENKRQNRLVREFISELESSIQKRRKDADEATN 363

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>SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein enhancer of|
           deformed) (52-kDa bracketing protein) (B52 protein)
          Length = 375

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 18/75 (24%), Positives = 31/75 (41%)
 Frame = -2

Query: 437 RRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESE 258
           RRS + R  H   + +++      +SKS      R R  +R     D  + K+     + 
Sbjct: 220 RRSRSRRSSHSRSKSRSRSKSRGGRSKSKSPVKSRSRSRSRSNKSRDVSKSKSKSHSRTR 279

Query: 257 QEGTRQHNDSRPRTR 213
               ++  DSR R+R
Sbjct: 280 SRSPKRERDSRSRSR 294

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>YAB9_YEAST (P31380) Hypothetical 128.5 kDa ATP-dependent helicase in ATS1-TPD3|
           intergenic region (EC 3.6.1.-)
          Length = 1131

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 23/131 (17%)
 Frame = -2

Query: 554 KKKGIQKDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNT-GRIVHLDEEPKTKDI 378
           KK G+Q  + G   +L +M   + + +D++   N       +NT G      E+  TK +
Sbjct: 386 KKWGVQ--VEGDNSELDLMNLGEDDDDDNDDGNNDNNNSNNNNTAGADATSKEKEDTKAV 443

Query: 377 QEIIKSKSMEAGP-----------KRKRVATRKGA-----------GIDSKQVKNHHEEE 264
            E     S E  P           KR R  T+               ID +  ++ HE++
Sbjct: 444 VEGFDETSAEPTPAPAPAPVERETKRIRNTTKPKVVEDEDDDVDLEAIDDELPQSEHEDD 503

Query: 263 SEQEGTRQHND 231
             +E    +ND
Sbjct: 504 DYEEEDEDYND 514

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>TRPG_CAEEL (Q93971) Transient receptor potential channel (Abnormal gonad|
           development protein 2)
          Length = 2032

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 218 TRRSCVDKELMNKDIQKCGVSRTRKTNR*LVEI 120
           TRR C      ++D+ KCG  RTR  +R + E+
Sbjct: 290 TRRECSRFIASSRDLHKCGCGRTRDAHRNIPEL 322

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>TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protein (EC 6.3.2.-)|
          Length = 4065

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
 Frame = -2

Query: 551  KKGIQKDIHGQADKLSV--MKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDI 378
            +KG  KD++G+A K ++  + T+       E +  M       N   I     E + K+ 
Sbjct: 3282 RKGKGKDVNGKAQKFAINSLLTLLDRSLVMESSAVMQVLADLLNKVTIPLQAIERRRKEA 3341

Query: 377  QEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEE-ESEQEGTRQHNDSRP 222
            +E  K K  EA  + K    R+ A    +Q     E+  ++QE T+Q ++S P
Sbjct: 3342 EEQAKKKK-EA--EEKAATEREAANAPEEQASTSTEQTPAQQEATQQPSESTP 3391

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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/95 (17%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
 Frame = -2

Query: 422  GRIVHLDEEPKTKDI-----QEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESE 258
            GR    D +P+ K+      ++ +K K      +R++    + + + ++ +  HH+ E  
Sbjct: 887  GRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQSEDR 946

Query: 257  QEGTRQHNDSRPRTRRSCVDKELMNKDIQKCGVSR 153
            +   R H++++ + +     K +  K     G+ R
Sbjct: 947  ETSDRAHDENKKKAK--IQKKPIKKKKEDDVGIER 979

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>GOGA5_HUMAN (Q8TBA6) Golgin subfamily A member 5 (Golgin-84) (RET-fused gene 5|
           protein) (Ret-II protein)
          Length = 731

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/97 (22%), Positives = 36/97 (37%)
 Frame = -2

Query: 488 KQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKG 309
           K EP DDE   +     ++  TGR+    E+ KT   Q    S      P    + T + 
Sbjct: 115 KSEP-DDELLFDFLNSSQKEPTGRVEIRKEKGKTPVFQSSQTSSVSSVNPSVTTIKTIEE 173

Query: 308 AGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVD 198
               S+  +     +S  EG  + +     +  +C D
Sbjct: 174 NSFGSQTHEAASNSDSSHEGQEESSKENVSSNAACPD 210

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>STK3_MOUSE (Q9JI10) Serine/threonine-protein kinase 3 (EC 2.7.11.1)|
           (STE20-like kinase MST2) (MST-2) (Mammalian STE20-like
           protein kinase 2)
          Length = 497

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
 Frame = -2

Query: 407 LDEEPKTKDIQEI-----IKSKSMEAGPKRKRVATRKGAG-----------------IDS 294
           L+EE +  D  E+     +K+ S   G  R      +GA                  + +
Sbjct: 309 LEEEEENSDEDELDSHTMVKTSSESVGTMRATSTMSEGAQTMIEHNSTMLESDLGTMVIN 368

Query: 293 KQVKNHHEEESEQEGTRQHNDSRPRTRR-SCVD----KELMNKDIQKCGVS 156
            + +   EEE E++GT + N + P+ +R S +D    ++  NK  + C  S
Sbjct: 369 SEEEEEEEEEEEEDGTMKRNATSPQVQRPSFMDYFDKQDFKNKSHENCDQS 419

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>BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain protein 1A|
           (ATP-utilizing chromatin assembly and remodeling factor
           1) (hACF1) (ATP-dependent chromatin remodelling protein)
           (Williams syndrome transcription factor-related
           chromatin remodeli
          Length = 1556

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 25/137 (18%), Positives = 55/137 (40%), Gaps = 8/137 (5%)
 Frame = -2

Query: 521 QADKLSVMKTIKQE-----PEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSK 357
           +A  LS  K  +Q+     P+D    I      RR    + +H+ +E    + Q +   +
Sbjct: 242 KASSLSTYKIAEQDFSYFFPDDPPTFIFSPANRRRGRPPKRIHISQEDNVANKQTLASYR 301

Query: 356 SMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTR---RSCVDKELM 186
           S     + K +   +   +  ++ K   E+    E  ++  + + + R   +  V++E +
Sbjct: 302 SKATKERDKLLKQEEMKSLAFEKAKLKREKADALEAKKKEKEDKEKKREELKKIVEEERL 361

Query: 185 NKDIQKCGVSRTRKTNR 135
            K  +K  +   R+  R
Sbjct: 362 KKKEEKERLKVEREKER 378

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>ROK1_SCHPO (Q09775) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)|
          Length = 481

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = -2

Query: 368 IKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGT-RQHNDS 228
           +K K  ++ PKRKR+ TR       +Q K  + ++ ++E + ++HN++
Sbjct: 428 MKKKLKKSPPKRKRITTRASYDRQKEQRKKEYIKKVKKEASIKKHNEA 475

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>BCA1_YEAST (P38891) Branched-chain-amino-acid aminotransferase, mitochondrial|
           precursor (EC 2.6.1.42) (BCAT) (TWT1 protein) (ECA39
           protein)
          Length = 393

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/74 (22%), Positives = 35/74 (47%)
 Frame = -3

Query: 442 GVGEATQVVLYTLMRNQKLKIFRK*SNQNLWKQAPRESVSQLAKVLVLIASK*RITMKKN 263
           GVG+      Y      +L+  ++   QNLW   P ++++++  + V      ++T KK 
Sbjct: 214 GVGDKKLGANYAPCILPQLQAAKRGYQQNLWLFGPEKNITEVGTMNVFFVFLNKVTGKKE 273

Query: 262 RSRKVLGSTMIQGL 221
                L  T+++G+
Sbjct: 274 LVTAPLDGTILEGV 287

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>KAD_SHEON (Q8EFF5) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 214

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/79 (22%), Positives = 36/79 (45%)
 Frame = -2

Query: 518 ADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGP 339
           A+ +S+   I+ +  D+E    M+ R     +GR+ H+   P   + ++ +  + +   P
Sbjct: 98  ANGISIDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRP 157

Query: 338 KRKRVATRKGAGIDSKQVK 282
             +    RK  GI  +Q K
Sbjct: 158 DDEEATVRKRLGIYHEQTK 176

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>ARS2_MOUSE (Q99MR6) Arsenite-resistance protein 2|
          Length = 875

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = -2

Query: 377 QEIIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSR--PRTRRS- 207
           QE  + ++ + G   K+   R G  +   + K + ++E +++G +  NDS    +T++S 
Sbjct: 270 QEEEEEQAGKTGEASKKEEARAGPALGEGERKANDKDEKKEDGKQAENDSSNDDKTKKSE 329

Query: 206 -CVDKELMNKDIQKCGVSRTRKTNR 135
              DKE   ++ +K    +++K NR
Sbjct: 330 GDGDKEEKKEEAEK-EAKKSKKRNR 353

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>RENT2_HUMAN (Q9HAU5) Regulator of nonsense transcripts 2 (Nonsense mRNA|
           reducing factor 2) (Up-frameshift suppressor 2 homolog)
           (hUpf2)
          Length = 1272

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
 Frame = -2

Query: 512 KLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKR 333
           KL+  K + + PED +  +   KR +          D+E K KD +++   K+ E   K+
Sbjct: 42  KLTAKKEVSKAPEDKKKRLEDDKRKKE---------DKERKKKDEEKV---KAEEESKKK 89

Query: 332 KRVATRKGAGIDSKQVKNHHEEE---SEQEGTRQHND 231
                      + ++ K H EEE    E++  RQ  +
Sbjct: 90  -----------EEEEKKKHQEEERKKQEEQAKRQQEE 115

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>KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase type IV (EC|
           2.7.11.17) (CAM kinase-GR) (CaMK IV) (Calspermin)
          Length = 474

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/89 (19%), Positives = 39/89 (43%)
 Frame = -2

Query: 554 KKKGIQKDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQ 375
           +++G++++   + ++    + + QEPED                   +  D++   ++ +
Sbjct: 397 EEEGVKEEEEEEEEEEETSRMVPQEPEDR------------------LETDDQEMKRNSE 438

Query: 374 EIIKSKSMEAGPKRKRVATRKGAGIDSKQ 288
           E +KS   E  PK +  A   G G+  +Q
Sbjct: 439 ETLKSVEEEMDPKAEEEAAAVGLGVPPQQ 467

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>EIL3_ARATH (O23116) ETHYLENE-INSENSITIVE3-like 3 protein|
          Length = 567

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
 Frame = -2

Query: 509 LSVMKTIKQEPEDDEPNINMTKRGRRSNTG----RIVHLDEEPKTKDIQEIIKSKSMEAG 342
           L+  +++ Q+P  D  N N+T+  RR N       +V+ D +      +E   S S +  
Sbjct: 279 LNQEESLIQQPSSDNGNSNVTETHRRGNNADRRKPVVNSDSDYDVDGTEEASGSVSSK-D 337

Query: 341 PKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKE 192
            +R ++   +   I        H    + +  +     RPR R   V+++
Sbjct: 338 SRRNQIQKEQPTAIS-------HSVRDQDKAEKHRRRKRPRIRSGTVNRQ 380

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>BNI4_YEAST (P53858) Protein BNI4|
          Length = 892

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
 Frame = -2

Query: 542 IQKDIHGQADKLSVMKTIKQEPEDDEPNINMTKRGR---RSNTGRIVHLDEEPKTKDIQE 372
           I K+I  Q+   S+         D E ++     G    R +  + V++   P    + +
Sbjct: 38  ILKEISDQSLNSSIKPCESVLDRDVESSVLQRSFGESNARDSEVQTVNMTTSPSLSALAD 97

Query: 371 IIKSKSMEAGPKRKRVATRKGAGIDSKQVKNHHEEESEQEGTRQHND 231
           I+  +S  A  K     TRK   I+S  ++   E E +      H D
Sbjct: 98  ILNERSKYADQK-----TRKAQNIESSIIEEEEEAEEQNNSINYHED 139

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>VAC7_YEAST (P53950) Vacuolar segregation protein 7|
          Length = 1165

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
 Frame = -2

Query: 473 DDEPNINMTKRGRRSNTGRIVHLDEEPKTKDIQEIIKSKSMEAGPKRKRVATRKG----- 309
           DD  N N  K+ +  N+G+    D+  K       I + S +  P    + +        
Sbjct: 304 DDNENNNKMKKNKNINSGKNERNDDTSK-------ICTTSTKTAPSTAPLGSTDNTQALT 356

Query: 308 AGIDSKQVKNHHEEESEQEGTRQHNDSRPRTRRSCVDKELMNKDI 174
           A + S    NH+  + +       N+S   + ++  D +  N D+
Sbjct: 357 ASVSSSNADNHNNNKKKTSSNNNGNNSNSASNKTNADIKNSNADL 401


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,584,756
Number of Sequences: 219361
Number of extensions: 1499901
Number of successful extensions: 4731
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 4436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4682
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result