Clone Name | rbasd20f02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MT1_WHEAT (P43400) Metallothionein-like protein 1 (MT-1) | 86 | 7e-17 | 2 | MT1_FESRU (O24528) Metallothionein-like protein 1 (MT-1) | 53 | 4e-07 | 3 | MT1_ORYSA (Q40633) Metallothionein-like protein 1 | 45 | 8e-05 | 4 | MT1_MAIZE (P30571) Metallothionein-like protein 1 (MT-1) | 36 | 0.060 | 5 | MT1_HORVU (P26571) Metallothionein-like protein 1 (MT-1) | 35 | 0.10 |
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>MT1_WHEAT (P43400) Metallothionein-like protein 1 (MT-1)| Length = 75 Score = 85.5 bits (210), Expect = 7e-17 Identities = 42/45 (93%), Positives = 43/45 (95%) Frame = -2 Query: 378 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEXCS 244 KMYPDLTEQGSA AQVAAVVVLG+APENKAGQFEVAAGQSGE CS Sbjct: 19 KMYPDLTEQGSAAAQVAAVVVLGVAPENKAGQFEVAAGQSGEGCS 63
>MT1_FESRU (O24528) Metallothionein-like protein 1 (MT-1)| Length = 70 Score = 53.1 bits (126), Expect = 4e-07 Identities = 27/39 (69%), Positives = 32/39 (82%) Frame = -2 Query: 378 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQ 262 KMYPDL EQ S T Q AVVV+G+A ENKAGQFE+A+G+ Sbjct: 19 KMYPDLDEQASTTTQ--AVVVVGVAHENKAGQFEMASGE 55
>MT1_ORYSA (Q40633) Metallothionein-like protein 1| Length = 74 Score = 45.4 bits (106), Expect = 8e-05 Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 2/47 (4%) Frame = -2 Query: 378 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA--GQSGEXCS 244 K YPDL E+ S+T A VVLG+APE KA QFE AA G++ CS Sbjct: 19 KKYPDLEEKSSSTK---ATVVLGVAPEKKAQQFEAAAESGETAHGCS 62
>MT1_MAIZE (P30571) Metallothionein-like protein 1 (MT-1)| Length = 76 Score = 35.8 bits (81), Expect = 0.060 Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Frame = -2 Query: 378 KMYPDLTEQGSATAQVAAVVVLGMAPENKAG-QFEVAAGQSGE 253 K YPDL E +A VVLG+APE KA +F AA +SGE Sbjct: 19 KKYPDLEETSTAAQPT---VVLGVAPEKKAAPEFVEAAAESGE 58
>MT1_HORVU (P26571) Metallothionein-like protein 1 (MT-1)| Length = 74 Score = 35.0 bits (79), Expect = 0.10 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = -2 Query: 378 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA--GQSGEXCS 244 KMYPDL E+ AT QV V+VLG+ + QFE AA G++ CS Sbjct: 19 KMYPDLEEKSGATMQV-TVIVLGVG--SAKVQFEEAAEFGEAAHGCS 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,921,907 Number of Sequences: 219361 Number of extensions: 468560 Number of successful extensions: 1175 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1174 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)