ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20e22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G09, full insert sequence Length = 995 Score = 521 bits (263), Expect = e-145 Identities = 422/475 (88%) Strand = Plus / Minus Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 846 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 787 Query: 200 accggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaat 259 | ||| ||||| || ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 786 ctctgaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaat 727 Query: 260 cttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtga 319 ||||||| ||||| ||||||||||||||||| |||||||| |||||||| || || | || Sbjct: 726 cttcctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggaga 667 Query: 320 actgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtc 379 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 666 actgtgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagac 607 Query: 380 cggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgag 439 ||| ||||||||||| |||||||||||||||||||| |||||||| ||||| || |||| Sbjct: 606 tggcgctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgag 547 Query: 440 catttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatg 499 | |||||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| | Sbjct: 546 cgtttttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtagg 487 Query: 500 catgctgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggca 559 ||||||||||||| | ||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 486 catgctgcgtgtagacttgtgctttgtctgctatccattttgctaatacgtctacgggca 427 Query: 560 tctcatatccccattttttacggaactcggctgcttcatttcttgcttgggagac 614 ||||||| |||||||| |||||| || ||||| ||||| ||||||||| |||| Sbjct: 426 tctcatagccccatttgaaacggaattcagctgcctcattccttgcttggtagac 372 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 57 acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104 |||||||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 950 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 903
>dbj|AK101031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150K05, full insert sequence Length = 1048 Score = 521 bits (263), Expect = e-145 Identities = 422/475 (88%) Strand = Plus / Minus Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 858 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 799 Query: 200 accggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaat 259 | ||| ||||| || ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 798 ctctgaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaat 739 Query: 260 cttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtga 319 ||||||| ||||| ||||||||||||||||| |||||||| |||||||| || || | || Sbjct: 738 cttcctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggaga 679 Query: 320 actgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtc 379 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 678 actgtgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagac 619 Query: 380 cggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgag 439 |||| ||||||||||| |||||||||||||||||||| |||||||| ||||| || |||| Sbjct: 618 cggcgctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgag 559 Query: 440 catttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatg 499 | |||||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| | Sbjct: 558 cgtttttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtagg 499 Query: 500 catgctgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggca 559 ||||||||||||| | ||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 498 catgctgcgtgtagacttgtgctttgtctgctatccattttgctaatacgtctacgggca 439 Query: 560 tctcatatccccattttttacggaactcggctgcttcatttcttgcttgggagac 614 |||| || |||||||| |||||| || ||||| ||||| ||||||||| |||| Sbjct: 438 tctcgtagccccatttgaaacggaattcagctgcctcattccttgcttggtagac 384 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 57 acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104 |||||||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 962 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 915
>dbj|AK060026.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C02, full insert sequence Length = 1043 Score = 521 bits (263), Expect = e-145 Identities = 422/475 (88%) Strand = Plus / Minus Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 846 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 787 Query: 200 accggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaat 259 | ||| ||||| || ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 786 ctctgaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaat 727 Query: 260 cttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtga 319 ||||||| ||||| ||||||||||||||||| |||||||| |||||||| || || | || Sbjct: 726 cttcctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggaga 667 Query: 320 actgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtc 379 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 666 actgtgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagac 607 Query: 380 cggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgag 439 |||| ||||||||||| |||||||||||||||||||| |||||||| ||||| || |||| Sbjct: 606 cggcgctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgag 547 Query: 440 catttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatg 499 | |||||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| | Sbjct: 546 cgtttttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtagg 487 Query: 500 catgctgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggca 559 ||||||||||||| | ||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 486 catgctgcgtgtagacttgtgctttgtctgctatccattttgctaatacgtctacgggca 427 Query: 560 tctcatatccccattttttacggaactcggctgcttcatttcttgcttgggagac 614 |||| || |||||||| |||||| || ||||| ||||| ||||||||| |||| Sbjct: 426 tctcgtagccccatttgaaacggaattcagctgcctcattccttgcttggtagac 372 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 57 acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104 |||||||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 950 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 903
>dbj|AK059929.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-A07, full insert sequence Length = 1042 Score = 521 bits (263), Expect = e-145 Identities = 422/475 (88%) Strand = Plus / Minus Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 859 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 800 Query: 200 accggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaat 259 | ||| ||||| || ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 799 ctctgaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaat 740 Query: 260 cttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtga 319 ||||||| ||||| ||||||||||||||||| |||||||| |||||||| || || | || Sbjct: 739 cttcctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggaga 680 Query: 320 actgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtc 379 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 679 actgtgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagac 620 Query: 380 cggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgag 439 |||| ||||||||||| |||||||||||||||||||| |||||||| ||||| || |||| Sbjct: 619 cggcgctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgag 560 Query: 440 catttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatg 499 | |||||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| | Sbjct: 559 cgtttttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtagg 500 Query: 500 catgctgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggca 559 ||||||||||||| | ||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 499 catgctgcgtgtagacttgtgctttgtctgctatccattttgctaatacgtctacgggca 440 Query: 560 tctcatatccccattttttacggaactcggctgcttcatttcttgcttgggagac 614 |||| || |||||||| |||||| || ||||| ||||| ||||||||| |||| Sbjct: 439 tctcgtagccccatttgaaacggaattcagctgcctcattccttgcttggtagac 385 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 57 acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104 |||||||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 963 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 916
>dbj|AB026558.1| Oryza sativa (japonica cultivar-group) OsPAA1 mRNA for alpha 1 subunit of 20S proteasome, complete cds Length = 1010 Score = 521 bits (263), Expect = e-145 Identities = 422/475 (88%) Strand = Plus / Minus Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 824 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 765 Query: 200 accggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaat 259 | ||| ||||| || ||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 764 ctctgaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaat 705 Query: 260 cttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtga 319 ||||||| ||||| ||||||||||||||||| |||||||| |||||||| || || | || Sbjct: 704 cttcctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggaga 645 Query: 320 actgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtc 379 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 644 actgtgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagac 585 Query: 380 cggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgag 439 |||| ||||||||||| |||||||||||||||||||| |||||||| ||||| || |||| Sbjct: 584 cggcgctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgag 525 Query: 440 catttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatg 499 | |||||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| | Sbjct: 524 cgtttttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtagg 465 Query: 500 catgctgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggca 559 ||||||||||||| | ||||||||||||||| ||||||||||||||||| || || |||| Sbjct: 464 catgctgcgtgtagacttgtgctttgtctgctatccattttgctaatacgtctacgggca 405 Query: 560 tctcatatccccattttttacggaactcggctgcttcatttcttgcttgggagac 614 |||| || |||||||| |||||| || ||||| ||||| ||||||||| |||| Sbjct: 404 tctcgtagccccatttgaaacggaattcagctgcctcattccttgcttggtagac 350 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 57 acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104 |||||||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 928 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 881
>ref|XM_470540.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 741 Score = 513 bits (259), Expect = e-142 Identities = 418/471 (88%) Strand = Plus / Minus Query: 144 tcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtgaccg 203 |||||||||||| || |||||||||||||||||||| ||||||||||||||||||| | Sbjct: 741 tcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtgctct 682 Query: 204 gaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaatcttc 263 ||| ||||| || ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 681 gaaaacacgatcatctttcctcacaacaccgacctcaatctcggtggccttgaaatcttc 622 Query: 264 ctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtgaactg 323 ||| ||||| ||||||||||||||||| |||||||| |||||||| || || | |||||| Sbjct: 621 ctgaagaactgattgcaatgcagaaattgcaatctggacagtttcctcgtaggagaactg 562 Query: 324 cgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtccggc 383 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 561 tgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttaagaccggc 502 Query: 384 actagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatt 443 ||||||||||| |||||||||||||||||||| |||||||| ||||| || ||||| || Sbjct: 501 gctagttgccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgagcgtt 442 Query: 444 tttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatg 503 |||||| || ||||| |||| ||||||||||||||| |||||||| |||||||| ||||| Sbjct: 441 tttctcttcgtcatagcccaagaccatagcaactactccaaggggcctcatgtaggcatg 382 Query: 504 ctgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggcatctc 563 ||||||||| | ||||||||||||||| ||||||||||||||||| || || |||||||| Sbjct: 381 ctgcgtgtagacttgtgctttgtctgctatccattttgctaatacgtctacgggcatctc 322 Query: 564 atatccccattttttacggaactcggctgcttcatttcttgcttgggagac 614 || |||||||| |||||| || ||||| ||||| ||||||||| |||| Sbjct: 321 gtagccccatttgaaacggaattcagctgcctcattccttgcttggtagac 271
>emb|AJ293343.1|ZMA293343 Zea mays mRNA for maize 20S proteasome alpha subunit (paa gene) Length = 1040 Score = 454 bits (229), Expect = e-124 Identities = 409/469 (87%) Strand = Plus / Minus Query: 143 ctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtgacc 202 ||||||| || || ||||| || || ||||||||||| ||||||||||||||||| | | Sbjct: 823 ctcagtcacgttcactaattgccgtcaggtgctgatcgatctcctctgtcgtgagagctc 764 Query: 203 ggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaatctt 262 ||| || ||||| ||||| ||||||||||| || |||||||| || ||||||||||||| Sbjct: 763 tgaaaacgcggtcatcttttctcacaacaccaacttcgatctcagtggccttgaaatctt 704 Query: 263 cctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtgaact 322 |||| ||||| |||||||| ||||| || |||||||| |||||||||||||| ||||| | Sbjct: 703 cctggagaactgattgcaacgcagatattgcaatctgcacagtttcgtcataggtgaatt 644 Query: 323 gcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtccgg 382 |||| ||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 643 tcgggtcatccttcattttcttctccagaaaatttattgcttcctgctccttgagcccgg 584 Query: 383 cactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcat 442 ||||||||||||| ||||||||||||||||| || ||||| |||||||| || || |||| Sbjct: 583 cactagttgccttatgtccaaagaagtgaccagcagggtcgcacttgaatagttgggcat 524 Query: 443 ttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcat 502 ||||||| ||||| || |||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 523 ttttctcttcatcgtagcccaagaccatagcaactactccaaggggtctcatgtatgcat 464 Query: 503 gctgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggcatct 562 |||||||||| | ||| |||||||| ||||||||||||||||| ||||| || ||||||| Sbjct: 463 gctgcgtgtaaacttgagctttgtcagcaatccattttgctaacacatcaactggcatct 404 Query: 563 catatccccattttttacggaactcggctgcttcatttcttgcttggga 611 | || |||||||| ||| ||||| |||||||| || ||||||||||| Sbjct: 403 cgtagccccatttgaaacgaaactcagctgcttcgttccttgcttggga 355
>gb|AY104377.1| Zea mays PCO108605 mRNA sequence Length = 1142 Score = 426 bits (215), Expect = e-116 Identities = 407/471 (86%) Strand = Plus / Minus Query: 141 agctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtga 200 ||||||||| || || ||||| || || |||||||| |||||||||||||| ||||| Sbjct: 834 agctcagtcccgttcactaattgccgtcaggtgctggtcaatctcctctgttgtgagaac 775 Query: 201 ccggaagacacggtcttctttcctcacaacaccgacctcgatctcggtagccttgaaatc 260 | ||| | ||| |||||||| ||||||||||| || |||||||| || ||||||||||| Sbjct: 774 tctgaaaagacgttcttcttttctcacaacaccaacttcgatctcagtggccttgaaatc 715 Query: 261 ttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtgaa 320 |||||| ||||| |||||||||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 714 ttcctggagaactgattgcaatgcagatattgcaatctgaacagtttcatcataggtgaa 655 Query: 321 ctgcgggctatccttcattttcttctccagaaaatttattgcttcctgctccttaagtcc 380 | |||| |||||||||||||||||||| |||||||||||||||||||||||| || || Sbjct: 654 tttcgggtcatccttcattttcttctccaaaaaatttattgcttcctgctccttgagccc 595 Query: 381 ggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagc 440 ||||||||||||||| ||||||||||||||||| || ||||| || ||||| || || || Sbjct: 594 ggcactagttgccttatgtccaaagaagtgacccgcagggtcgcatttgaatagttgtgc 535 Query: 441 atttttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgc 500 ||||||||| || || || |||| ||||||||||||||| |||||||||||||||||||| Sbjct: 534 atttttctcttcgtcgtagcccaagaccatagcaactactccaaggggtctcatgtatgc 475 Query: 501 atgctgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggcat 560 ||| |||||||| | ||| |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 474 atgttgcgtgtaaacttgagctttgtcagcaatccattttgctaacacatcaactggcat 415 Query: 561 ctcatatccccattttttacggaactcggctgcttcatttcttgcttggga 611 |||||| |||||||| ||| ||||| |||||||| || ||||||||||| Sbjct: 414 ctcatagccccatttgaaacgaaactcagctgcttcgttccttgcttggga 364
>gb|BT014031.1| Lycopersicon esculentum clone 133094R, mRNA sequence Length = 1053 Score = 149 bits (75), Expect = 1e-32 Identities = 243/299 (81%) Strand = Plus / Minus Query: 214 tcttctttcctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaaca 273 |||||||| ||||||||||| ||||| || || | |||||||||||||| ||||||||| Sbjct: 748 tcttcttttctcacaacaccaacctcaatttcactggccttgaaatcttcttgcagaaca 689 Query: 274 gattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatcc 333 ||||| | |||||||| | ||||||||||||| ||||| | |||| ||| ||| Sbjct: 688 gattgaagagcagaaatagtggtctgaacagtttcctcataggagaacgcagggttattt 629 Query: 334 ttcattttcttctccagaaaatttattgcttcctgctccttaagtccggcactagttgcc 393 |||||||||||||||| ||| || ||||| || ||||| ||| ||||||||| || ||| Sbjct: 628 ttcattttcttctccaaaaagttaattgcctcttgctctttagatccggcacttgtagcc 569 Query: 394 ttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctca 453 || || ||||| || ||||| || |||||||| ||||||||||| | |||||||||| Sbjct: 568 ttatgaccaaaaaaatgaccagcagggtcacatttgaagagctggggccctttctcctca 509 Query: 454 tcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgta 512 ||| |||| | |||||||||||| |||||||||||||| || |||||||| ||||| Sbjct: 508 tcaatgcccaaaatcatagcaactactccaaggggtctcatataggcatgctgtgtgta 450
>emb|Y16644.1|NTY16644 Nicotiana tabacum mRNA for proteasome A-type subunit Length = 1035 Score = 143 bits (72), Expect = 8e-31 Identities = 285/356 (80%) Strand = Plus / Minus Query: 214 tcttctttcctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaaca 273 ||||||||| |||||||||| ||||| || || | ||||| ||||| || ||||| ||| Sbjct: 739 tcttctttcttcacaacaccaacctcaatttcactggccttaaaatcctcttgcaggaca 680 Query: 274 gattgcaatgcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatcc 333 ||||| | |||||||| ||| ||||||||||||| ||||| | ||| ||| || Sbjct: 679 gattgaagagcagaaattgcagtctgaacagtttcctcataggagaaagcagggtcattt 620 Query: 334 ttcattttcttctccagaaaatttattgcttcctgctccttaagtccggcactagttgcc 393 |||||||||||||||| |||||| ||||| || || || ||| ||| ||||| || ||| Sbjct: 619 ttcattttcttctccaaaaaattaattgcctcttgttctttagatccagcacttgtagcc 560 Query: 394 ttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctca 453 || || ||||| || ||||| || |||||||||||||||||||| | |||||||||| Sbjct: 559 ttatgaccaaaaaaatgaccagcagggtcacacttgaagagctggggtcctttctcctca 500 Query: 454 tcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgtat 513 ||| |||| | |||||||||||| |||||||||||||| || |||||||| ||||| Sbjct: 499 tcaatgcccaaaatcatagcaactactccaaggggtctcatataggcatgctgtgtgtaa 440 Query: 514 atttgtgctttgtctgcaatccattttgctaatacatccacaggcatctcatatcc 569 | || | ||||||||||||||||| | | ||||||||| ||||| |||||||| Sbjct: 439 acctgagacttgtctgcaatccatttagacagtacatccactggcatttcatatcc 384
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 4192401 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 4192460 Query: 200 accggaagacacggtcttctttcctcacaacaccgacct 238 | ||| ||||| || |||||||||||||||||||||| Sbjct: 4192461 ctctgaaaacacgatcatctttcctcacaacaccgacct 4192499 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 301 acagtttcgtcatatgtgaactgcgggctatccttcattttcttctccagaaaatttatt 360 |||||||| || || | |||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 4192732 acagtttcctcgtaggagaactgtgggtcatccttcattttcttctccagaaaatttatt 4192791 Query: 361 gcttcctgctccttaagtccggcactagttgcct 394 ||||||||||||||||| ||||| |||||||||| Sbjct: 4192792 gcttcctgctccttaagaccggcgctagttgcct 4192825 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 392 ccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcct 451 |||| |||||||||||||||||||| |||||||| ||||| || ||||| |||||||| | Sbjct: 4192978 ccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgagcgtttttctctt 4193037 Query: 452 catcataacccaggaccatagcaact 477 | ||||| |||| ||||||||||||| Sbjct: 4193038 cgtcatagcccaagaccatagcaact 4193063 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 235 acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaatgcagaaatcgca 294 ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 4192583 acctcaatctcggtggccttgaaatcttcctgaagaactgattgcaatgcagaaattgca 4192642 Query: 295 atctg 299 ||||| Sbjct: 4192643 atctg 4192647 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 476 ctacaccaaggggtctcatgtatgcatgctgcgtgtatatttgtgctttgtctgcaatcc 535 |||| |||||||| |||||||| |||||||||||||| | ||||||||||||||| |||| Sbjct: 4193180 ctactccaaggggcctcatgtaggcatgctgcgtgtagacttgtgctttgtctgctatcc 4193239 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 57 acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104 |||||||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 4192297 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 4192344 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 534 ccattttgctaatacatccacaggcatctcatatccccattttttacggaactcggctgc 593 ||||||||||||||| || || |||||||| || |||||||| |||||| || ||||| Sbjct: 4193353 ccattttgctaatacgtctacgggcatctcgtagccccatttgaaacggaattcagctgc 4193412 Query: 594 ttcatttcttgcttgggagac 614 ||||| ||||||||| |||| Sbjct: 4193413 ctcattccttgcttggtagac 4193433
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 4192510 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 4192569 Query: 200 accggaagacacggtcttctttcctcacaacaccgacct 238 | ||| ||||| || |||||||||||||||||||||| Sbjct: 4192570 ctctgaaaacacgatcatctttcctcacaacaccgacct 4192608 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 301 acagtttcgtcatatgtgaactgcgggctatccttcattttcttctccagaaaatttatt 360 |||||||| || || | |||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 4192841 acagtttcctcgtaggagaactgtgggtcatccttcattttcttctccagaaaatttatt 4192900 Query: 361 gcttcctgctccttaagtccggcactagttgcct 394 ||||||||||||||||| ||||| |||||||||| Sbjct: 4192901 gcttcctgctccttaagaccggcgctagttgcct 4192934 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 392 ccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcct 451 |||| |||||||||||||||||||| |||||||| ||||| || ||||| |||||||| | Sbjct: 4193087 ccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgagcgtttttctctt 4193146 Query: 452 catcataacccaggaccatagcaact 477 | ||||| |||| ||||||||||||| Sbjct: 4193147 cgtcatagcccaagaccatagcaact 4193172 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 235 acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaatgcagaaatcgca 294 ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 4192692 acctcaatctcggtggccttgaaatcttcctgaagaactgattgcaatgcagaaattgca 4192751 Query: 295 atctg 299 ||||| Sbjct: 4192752 atctg 4192756 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 476 ctacaccaaggggtctcatgtatgcatgctgcgtgtatatttgtgctttgtctgcaatcc 535 |||| |||||||| |||||||| |||||||||||||| | ||||||||||||||| |||| Sbjct: 4193289 ctactccaaggggcctcatgtaggcatgctgcgtgtagacttgtgctttgtctgctatcc 4193348 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 57 acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104 |||||||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 4192406 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 4192453 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 534 ccattttgctaatacatccacaggcatctcatatccccattttttacggaactcggctgc 593 ||||||||||||||| || || |||||||| || |||||||| |||||| || ||||| Sbjct: 4193462 ccattttgctaatacgtctacgggcatctcgtagccccatttgaaacggaattcagctgc 4193521 Query: 594 ttcatttcttgcttgggagac 614 ||||| ||||||||| |||| Sbjct: 4193522 ctcattccttgcttggtagac 4193542
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 93038 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 93097 Query: 200 accggaagacacggtcttctttcctcacaacaccgacct 238 | ||| ||||| || |||||||||||||||||||||| Sbjct: 93098 ctctgaaaacacgatcatctttcctcacaacaccgacct 93136 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 301 acagtttcgtcatatgtgaactgcgggctatccttcattttcttctccagaaaatttatt 360 |||||||| || || | |||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 93369 acagtttcctcgtaggagaactgtgggtcatccttcattttcttctccagaaaatttatt 93428 Query: 361 gcttcctgctccttaagtccggcactagttgcct 394 ||||||||||||||||| ||||| |||||||||| Sbjct: 93429 gcttcctgctccttaagaccggcgctagttgcct 93462 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 392 ccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcct 451 |||| |||||||||||||||||||| |||||||| ||||| || ||||| |||||||| | Sbjct: 93615 ccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgagcgtttttctctt 93674 Query: 452 catcataacccaggaccatagcaact 477 | ||||| |||| ||||||||||||| Sbjct: 93675 cgtcatagcccaagaccatagcaact 93700 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 235 acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaatgcagaaatcgca 294 ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 93220 acctcaatctcggtggccttgaaatcttcctgaagaactgattgcaatgcagaaattgca 93279 Query: 295 atctg 299 ||||| Sbjct: 93280 atctg 93284 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 476 ctacaccaaggggtctcatgtatgcatgctgcgtgtatatttgtgctttgtctgcaatcc 535 |||| |||||||| |||||||| |||||||||||||| | ||||||||||||||| |||| Sbjct: 93817 ctactccaaggggcctcatgtaggcatgctgcgtgtagacttgtgctttgtctgctatcc 93876 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 57 acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104 |||||||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 92934 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 92981 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 534 ccattttgctaatacatccacaggcatctcatatccccattttttacggaactcggctgc 593 ||||||||||||||| || || |||||||| || |||||||| |||||| || ||||| Sbjct: 93990 ccattttgctaatacgtctacgggcatctcgtagccccatttgaaacggaattcagctgc 94049 Query: 594 ttcatttcttgcttgggagac 614 ||||| ||||||||| |||| Sbjct: 94050 ctcattccttgcttggtagac 94070
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 140 tagctcagtcgcgctcgctaatggctgttaggtgctgatcaatctcctctgtcgtgagtg 199 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 21016 tagctcagtcgcgctcacttatggctgttaggtgctgatcgatctcctctgtcgtgagtg 21075 Query: 200 accggaagacacggtcttctttcctcacaacaccgacct 238 | ||| ||||| || |||||||||||||||||||||| Sbjct: 21076 ctctgaaaacacgatcatctttcctcacaacaccgacct 21114 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 301 acagtttcgtcatatgtgaactgcgggctatccttcattttcttctccagaaaatttatt 360 |||||||| || || | |||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 21347 acagtttcctcgtaggagaactgtgggtcatccttcattttcttctccagaaaatttatt 21406 Query: 361 gcttcctgctccttaagtccggcactagttgcct 394 ||||||||||||||||| ||||| |||||||||| Sbjct: 21407 gcttcctgctccttaagaccggcgctagttgcct 21440 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 392 ccttgtgtccaaagaagtgacctgcggggtcacacttgaagagctgagcatttttctcct 451 |||| |||||||||||||||||||| |||||||| ||||| || ||||| |||||||| | Sbjct: 21593 ccttatgtccaaagaagtgacctgccgggtcacatttgaatagttgagcgtttttctctt 21652 Query: 452 catcataacccaggaccatagcaact 477 | ||||| |||| ||||||||||||| Sbjct: 21653 cgtcatagcccaagaccatagcaact 21678 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 235 acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaatgcagaaatcgca 294 ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 21198 acctcaatctcggtggccttgaaatcttcctgaagaactgattgcaatgcagaaattgca 21257 Query: 295 atctg 299 ||||| Sbjct: 21258 atctg 21262 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 476 ctacaccaaggggtctcatgtatgcatgctgcgtgtatatttgtgctttgtctgcaatcc 535 |||| |||||||| |||||||| |||||||||||||| | ||||||||||||||| |||| Sbjct: 21795 ctactccaaggggcctcatgtaggcatgctgcgtgtagacttgtgctttgtctgctatcc 21854 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 57 acatgaaatgattcactgaatgtttcttggctggccatgaaacaaaat 104 |||||||||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 20912 acatgaaatggttcactgaatgtttcttggctgaacatgaaataaaat 20959 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 534 ccattttgctaatacatccacaggcatctcatatccccattttttacggaactcggctgc 593 ||||||||||||||| || || |||||||| || |||||||| |||||| || ||||| Sbjct: 21968 ccattttgctaatacgtctacgggcatctcgtagccccatttgaaacggaattcagctgc 22027 Query: 594 ttcatttcttgcttgggagac 614 ||||| ||||||||| |||| Sbjct: 22028 ctcattccttgcttggtagac 22048
>gb|AF034572.1|AF034572 Glycine max proteasome IOTA subunit mRNA, complete cds Length = 994 Score = 123 bits (62), Expect = 7e-25 Identities = 296/374 (79%) Strand = Plus / Minus Query: 235 acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaatgcagaaatcgca 294 ||||| ||||| || ||||| ||||| ||||| ||||| ||||||| |||||||| ||| Sbjct: 764 acctcaatctcagtggccttaaaatcctcctgaagaactgattgcagggcagaaatggca 705 Query: 295 atctgaacagtttcgtcatatgtgaactgcgggctatccttcattttcttctccagaaaa 354 ||||||| || || |||||||| || ||| || |||||| ||||| |||| ||| Sbjct: 704 gtctgaaccgtctcctcatatgtaaatgaagggtcattcttcatcttcttttccaagaaa 645 Query: 355 tttattgcttcctgctccttaagtccggcactagttgccttgtgtccaaagaagtgacct 414 || ||||| || || ||||| | ||| ||||| ||||||||||| |||||| | ||||| Sbjct: 644 ttaattgcctcttggtccttcaatccagcacttgttgccttgtgaccaaagtaatgacca 585 Query: 415 gcggggtcacacttgaagagctgagcatttttctcctcatcataacccaggaccatagca 474 || || ||||| ||| | ||||||| | || |||||| ||||| ||||||||| Sbjct: 584 gctggatcacatttgtatagctgaggtccatattcatcatcaatacccaaaaccatagca 525 Query: 475 actacaccaaggggtctcatgtatgcatgctgcgtgtatatttgtgctttgtctgcaatc 534 ||||| || || |||||||| || ||||| || || || | ||||| ||| ||||||||| Sbjct: 524 actactccgagtggtctcatataagcatgttgagtatagacttgtgatttatctgcaatc 465 Query: 535 cattttgctaatacatccacaggcatctcatatccccattttttacggaactcggctgct 594 ||||| ||||||||||| ||||||||||||||||| || | || ||||| |||||| Sbjct: 464 catttagctaatacatctacaggcatctcatatccatatgtaaagcgaaactcagctgct 405 Query: 595 tcatttcttgcttg 608 |||||||||||||| Sbjct: 404 tcatttcttgcttg 391
>ref|NM_122950.2| Arabidopsis thaliana PAA1; endopeptidase/ peptidase/ threonine endopeptidase AT5G35590 (PAA1) mRNA, complete cds Length = 1037 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Minus Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282 ||||| ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 711 ctcaccacacctacctcaatctcagtagccttgaagtcttcttgaagaacagattgcaaa 652 Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342 || || || ||| |||| || ||||| ||| ||||||| ||| | || ||||||||| Sbjct: 651 gccgatatggcagtctgcacggtttcatcaaatgtgaaagatgggttttctttcattttc 592 Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtg 398 ||||||| ||||| | |||||| || ||||| | || ||||||||||||||||| Sbjct: 591 ttctccaagaaattgactgcttcttgttccttcataccagcactagttgccttgtg 536 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 445 ttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgc 504 ||||| |||||| ||||| |||||||| || || ||||||||||||||||| ||||| Sbjct: 489 ttctcttcatcaacacccattaccatagcgacaactccaaggggtctcatgtaagcatgt 430 Query: 505 tgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggcatctca 564 || ||||| | |||| ||||| || |||||||| || | | || |||||||||||| Sbjct: 429 tgagtgtagacctgtgacttgtccgctatccatttagcaagaatgtcaacaggcatctca 370 Query: 565 tatcc 569 ||||| Sbjct: 369 tatcc 365
>emb|Y13691.1|ATY13691 Arabidopsis thaliana mRNA for proteasome subunit prc1 Length = 976 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Minus Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282 ||||| ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 659 ctcaccacacctacctcaatctcagtagccttgaagtcttcttgaagaacagattgcaaa 600 Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342 || || || ||| |||| || ||||| ||| ||||||| ||| | || ||||||||| Sbjct: 599 gccgatatggcagtctgcacggtttcatcaaatgtgaaagatgggttttctttcattttc 540 Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtg 398 ||||||| ||||| | |||||| || ||||| | || ||||||||||||||||| Sbjct: 539 ttctccaagaaattgactgcttcttgttccttcataccagcactagttgccttgtg 484 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 445 ttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgc 504 ||||| |||||| ||||| |||||||| || || ||||||||||||||||| ||||| Sbjct: 437 ttctcttcatcaacacccattaccatagcgacaactccaaggggtctcatgtaagcatgt 378 Query: 505 tgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggcatctca 564 || ||||| | |||| ||||| || |||||||| || | | || |||||||||||| Sbjct: 377 tgagtgtagacctgtgacttgtccgctatccatttagcaagaatgtcaacaggcatctca 318 Query: 565 tatcc 569 ||||| Sbjct: 317 tatcc 313
>gb|AY114564.1| Arabidopsis thaliana multicatalytic endopeptidase complex alpha subunit-like (At5g35590) mRNA, complete cds Length = 777 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Minus Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282 ||||| ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 662 ctcaccacacctacctcaatctcagtagccttgaagtcttcttgaagaacagattgcaaa 603 Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342 || || || ||| |||| || ||||| ||| ||||||| ||| | || ||||||||| Sbjct: 602 gccgatatggcagtctgcacggtttcatcaaatgtgaaagatgggttttctttcattttc 543 Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtg 398 ||||||| ||||| | |||||| || ||||| | || ||||||||||||||||| Sbjct: 542 ttctccaagaaattgactgcttcttgttccttcataccagcactagttgccttgtg 487 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 445 ttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgc 504 ||||| |||||| ||||| |||||||| || || ||||||||||||||||| ||||| Sbjct: 440 ttctcttcatcaacacccattaccatagcgacaactccaaggggtctcatgtaagcatgt 381 Query: 505 tgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggcatctca 564 || ||||| | |||| ||||| || |||||||| || | | || |||||||||||| Sbjct: 380 tgagtgtagacctgtgacttgtccgctatccatttagcaagaatgtcaacaggcatctca 321 Query: 565 tatcc 569 ||||| Sbjct: 320 tatcc 316
>gb|AY092969.1| Arabidopsis thaliana multicatalytic endopeptidase complex alpha subunit-like (At5g35590) mRNA, complete cds Length = 1008 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Minus Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282 ||||| ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 711 ctcaccacacctacctcaatctcagtagccttgaagtcttcttgaagaacagattgcaaa 652 Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342 || || || ||| |||| || ||||| ||| ||||||| ||| | || ||||||||| Sbjct: 651 gccgatatggcagtctgcacggtttcatcaaatgtgaaagatgggttttctttcattttc 592 Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtg 398 ||||||| ||||| | |||||| || ||||| | || ||||||||||||||||| Sbjct: 591 ttctccaagaaattgactgcttcttgttccttcataccagcactagttgccttgtg 536 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 445 ttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgc 504 ||||| |||||| ||||| |||||||| || || ||||||||||||||||| ||||| Sbjct: 489 ttctcttcatcaacacccattaccatagcgacaactccaaggggtctcatgtaagcatgt 430 Query: 505 tgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggcatctca 564 || ||||| | |||| ||||| || |||||||| || | | || |||||||||||| Sbjct: 429 tgagtgtagacctgtgacttgtccgctatccatttagcaagaatgtcaacaggcatctca 370 Query: 565 tatcc 569 ||||| Sbjct: 369 tatcc 365
>gb|AF043518.1|AF043518 Arabidopsis thaliana 20S proteasome subunit PAA1 (PAA1) mRNA, complete cds Length = 1029 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282 ||||| ||||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 716 ctcaccacacctacctcaatctcagtagccttgaagtcttcttgaagaacagattgcaaa 657 Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaa 320 || || || ||| |||| || ||||| ||| ||||||| Sbjct: 656 gccgatatggcagtctgcacggtttcatcaaatgtgaa 619 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Minus Query: 445 ttctcctcatcataacccaggaccatagcaactacaccaaggggtctcatgtatgcatgc 504 ||||| |||||| ||||| |||||||| || || ||||||||||||||||| ||||| Sbjct: 494 ttctcttcatcaacacccattaccatagcgacaactccaaggggtctcatgtaagcatgt 435 Query: 505 tgcgtgtatatttgtgctttgtctgcaatccattttgctaatacatccacaggcatctca 564 || ||||| | |||| ||||| || |||||||| || | | || |||||||||||| Sbjct: 434 tgagtgtaaacctgtgacttgtccgctatccatttagcaagaatgtcaacaggcatctca 375 Query: 565 tatcc 569 ||||| Sbjct: 374 tatcc 370
>gb|AC146756.17| Medicago truncatula clone mth2-15l17, complete sequence Length = 120437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 534 ccattttgctaatacatccacaggcatctcatatccccattttttacggaactcggctgc 593 |||||| || || |||||||| |||||||||||||| |||| | || ||||| ||||| Sbjct: 46284 ccatttagccaacacatccaccggcatctcatatccaaatttatggcgaaactcagctgc 46343 Query: 594 ttcatttcttgcttg 608 ||||||||||||||| Sbjct: 46344 ttcatttcttgcttg 46358
>ref|NM_126597.2| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine endopeptidase AT2G05840 (PAA2) transcript variant AT2G05840.1 mRNA, complete cds Length = 1093 Score = 60.0 bits (30), Expect = 9e-06 Identities = 225/290 (77%) Strand = Plus / Minus Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282 |||||||| || ||||| || || || || ||||| ||||| || ||||||||||| | Sbjct: 778 ctcacaactcccacctcaatttcagttgctttgaagtcttcttgaagaacagattggaga 719 Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342 || || || ||| |||| || ||||| ||||||||||| ||| | || ||||||||| Sbjct: 718 gcggatatagcagtctgtactgtttcatcatatgtgaaggcagggttttctttcattttc 659 Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtgtcca 402 ||||||| ||||| | |||||| || || || | || ||||||||||||||||| || Sbjct: 658 ttctccaagaaattgactgcttcttgttctttcataccagcactagttgccttgtgaccg 599 Query: 403 aagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctcatcataaccc 462 | || || || || |||||||||||| | || ||| | |||| |||||| ||| Sbjct: 598 taaaaatgtccagctgggtcacacttgtaaagtagaggtcctctctcttcatcaatacct 539 Query: 463 aggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgta 512 || ||||| |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 538 agaaccatggcaactactccaaggggtctcatgtaagcatgttgtgtgta 489
>gb|AY143829.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds Length = 741 Score = 60.0 bits (30), Expect = 9e-06 Identities = 225/290 (77%) Strand = Plus / Minus Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282 |||||||| || ||||| || || || || ||||| ||||| || ||||||||||| | Sbjct: 662 ctcacaactcccacctcaatttcagttgctttgaagtcttcttgaagaacagattggaga 603 Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342 || || || ||| |||| || ||||| ||||||||||| ||| | || ||||||||| Sbjct: 602 gcggatatagcagtctgtactgtttcatcatatgtgaaggcagggttttctttcattttc 543 Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtgtcca 402 ||||||| ||||| | |||||| || || || | || ||||||||||||||||| || Sbjct: 542 ttctccaagaaattgactgcttcttgttctttcataccagcactagttgccttgtgaccg 483 Query: 403 aagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctcatcataaccc 462 | || || || || |||||||||||| | || ||| | |||| |||||| ||| Sbjct: 482 taaaaatgtccagctgggtcacacttgtaaagtagaggtcctctctcttcatcaatacct 423 Query: 463 aggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgta 512 || ||||| |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 422 agaaccatggcaactactccaaggggtctcatgtaagcatgttgtgtgta 373
>gb|AY052679.1| Arabidopsis thaliana At2g05840/T6P5.4 mRNA, complete cds Length = 1014 Score = 60.0 bits (30), Expect = 9e-06 Identities = 225/290 (77%) Strand = Plus / Minus Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282 |||||||| || ||||| || || || || ||||| ||||| || ||||||||||| | Sbjct: 721 ctcacaactcccacctcaatttcagttgctttgaagtcttcttgaagaacagattggaga 662 Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342 || || || ||| |||| || ||||| ||||||||||| ||| | || ||||||||| Sbjct: 661 gcggatatagcagtctgtactgtttcatcatatgtgaaggcagggttttctttcattttc 602 Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtgtcca 402 ||||||| ||||| | |||||| || || || | || ||||||||||||||||| || Sbjct: 601 ttctccaagaaattgactgcttcttgttctttcataccagcactagttgccttgtgaccg 542 Query: 403 aagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctcatcataaccc 462 | || || || || |||||||||||| | || ||| | |||| |||||| ||| Sbjct: 541 taaaaatgtccagctgggtcacacttgtaaagtagaggtcctctctcttcatcaatacct 482 Query: 463 aggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgta 512 || ||||| |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 481 agaaccatggcaactactccaaggggtctcatgtaagcatgttgtgtgta 432
>gb|AF043519.1|AF043519 Arabidopsis thaliana 20S proteasome subunit PAA2 (PAA2) mRNA, complete cds Length = 1113 Score = 60.0 bits (30), Expect = 9e-06 Identities = 225/290 (77%) Strand = Plus / Minus Query: 223 ctcacaacaccgacctcgatctcggtagccttgaaatcttcctgcagaacagattgcaat 282 |||||||| || ||||| || || || || ||||| ||||| || ||||||||||| | Sbjct: 778 ctcacaactcccacctcaatttcagttgctttgaagtcttcttgaagaacagattggaga 719 Query: 283 gcagaaatcgcaatctgaacagtttcgtcatatgtgaactgcgggctatccttcattttc 342 || || || ||| |||| || ||||| ||||||||||| ||| | || ||||||||| Sbjct: 718 gcggatatagcagtctgtactgtttcatcatatgtgaaggcagggttttctttcattttc 659 Query: 343 ttctccagaaaatttattgcttcctgctccttaagtccggcactagttgccttgtgtcca 402 ||||||| ||||| | |||||| || || || | || ||||||||||||||||| || Sbjct: 658 ttctccaagaaattgactgcttcttgttctttcataccagcactagttgccttgtgaccg 599 Query: 403 aagaagtgacctgcggggtcacacttgaagagctgagcatttttctcctcatcataaccc 462 | || || || || |||||||||||| | || ||| | |||| |||||| ||| Sbjct: 598 taaaaatgtccagctgggtcacacttgtaaagtagaggtcctctctcttcatcaatacct 539 Query: 463 aggaccatagcaactacaccaaggggtctcatgtatgcatgctgcgtgta 512 || ||||| |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 538 agaaccatggcaactactccaaggggtctcatgtaagcatgttgtgtgta 489
>ref|NM_001036263.1| Arabidopsis thaliana PAA2; endopeptidase/ peptidase/ threonine endopeptidase AT2G05840 (PAA2) transcript variant AT2G05840.2 mRNA, complete cds Length = 1114 Score = 56.0 bits (28), Expect = 1e-04 Identities = 202/260 (77%) Strand = Plus / Minus Query: 253 ttgaaatcttcctgcagaacagattgcaatgcagaaatcgcaatctgaacagtttcgtca 312 ||||| ||||| || ||||||||||| | || || || ||| |||| || ||||| ||| Sbjct: 766 ttgaagtcttcttgaagaacagattggagagcggatatagcagtctgtactgtttcatca 707 Query: 313 tatgtgaactgcgggctatccttcattttcttctccagaaaatttattgcttcctgctcc 372 |||||||| ||| | || |||||||||||||||| ||||| | |||||| || || Sbjct: 706 tatgtgaaggcagggttttctttcattttcttctccaagaaattgactgcttcttgttct 647 Query: 373 ttaagtccggcactagttgccttgtgtccaaagaagtgacctgcggggtcacacttgaag 432 || | || ||||||||||||||||| || | || || || || |||||||||||| | Sbjct: 646 ttcataccagcactagttgccttgtgaccgtaaaaatgtccagctgggtcacacttgtaa 587 Query: 433 agctgagcatttttctcctcatcataacccaggaccatagcaactacaccaaggggtctc 492 || ||| | |||| |||||| ||| || ||||| |||||||| |||||||||||| Sbjct: 586 agtagaggtcctctctcttcatcaatacctagaaccatggcaactactccaaggggtctc 527 Query: 493 atgtatgcatgctgcgtgta 512 ||||| ||||| || ||||| Sbjct: 526 atgtaagcatgttgtgtgta 507
>dbj|AB023031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2K18 Length = 41465 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 235 acctcgatctcggtagccttgaaatcttcctgcagaacagattgcaa 281 ||||| ||||| ||||||||||| ||||| || |||||||||||||| Sbjct: 16954 acctcaatctcagtagccttgaagtcttcttgaagaacagattgcaa 17000 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Plus Query: 334 ttcattttcttctccagaaaatttattgcttcctgctccttaagtccggcactagttgcc 393 |||||||||||||||| ||||| | |||||| || ||||| | || |||||||||||| Sbjct: 17230 ttcattttcttctccaagaaattgactgcttcttgttccttcataccagcactagttgcc 17289 Query: 394 t 394 | Sbjct: 17290 t 17290 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 481 ccaaggggtctcatgtatgcatgctgcgtgta 512 ||||||||||||||||| ||||| || ||||| Sbjct: 18264 ccaaggggtctcatgtaagcatgttgagtgta 18295
>emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on chromosome 1 Contains a novel pseudogene, a farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) (FDPS) pseudogene, a novel gene (LOC339476) and the 5' end of a solute carrier family 4 (anion exchanger) member 1 adaptor protein (SLC4A1AP) pseudogene, complete sequence Length = 190912 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 267 cagaacagattgcaatgcagaaa 289 ||||||||||||||||||||||| Sbjct: 2202 cagaacagattgcaatgcagaaa 2224
>gb|AC098969.2| Homo sapiens chromosome 3 clone RP11-24O17, complete sequence Length = 158560 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 aatgattcactgaatgtttctt 84 |||||||||||||||||||||| Sbjct: 23257 aatgattcactgaatgtttctt 23236
>gb|AC156556.8| Mus musculus chromosome 7, clone RP23-92E8, complete sequence Length = 250903 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 354 atttattgcttcctgctcctt 374 ||||||||||||||||||||| Sbjct: 125633 atttattgcttcctgctcctt 125613
>emb|Z73908.1|CEF53B2 Caenorhabditis elegans Cosmid F53B2, complete sequence Length = 33478 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 tatttgtgctttgtctgcaat 533 ||||||||||||||||||||| Sbjct: 18194 tatttgtgctttgtctgcaat 18174
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 476 ctacaccaaggggtctcatgtatgcatgctgcgtgta 512 |||| ||||||||||||||||| ||||| || ||||| Sbjct: 18849 ctactccaaggggtctcatgtaagcatgttgtgtgta 18813
>gb|AC022039.7| Homo sapiens chromosome 8, clone RP11-3G21, complete sequence Length = 176815 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 cattttcttctccagaaaatt 356 ||||||||||||||||||||| Sbjct: 108314 cattttcttctccagaaaatt 108294
>ref|NM_069999.2| Caenorhabditis elegans F53B2.5 (F53B2.5) mRNA, complete cds Length = 1347 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 513 tatttgtgctttgtctgcaat 533 ||||||||||||||||||||| Sbjct: 516 tatttgtgctttgtctgcaat 536
>gb|AC098818.3| Homo sapiens BAC clone RP11-109G23 from 4, complete sequence Length = 216451 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 catgaaacaaaataacagtttatgg 116 |||||| |||||||||||||||||| Sbjct: 59272 catgaagcaaaataacagtttatgg 59296
>dbj|AP003471.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1552D7 Length = 160912 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 aaatcttcctgcagaacagat 276 ||||||||||||||||||||| Sbjct: 125199 aaatcttcctgcagaacagat 125219
>dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1742H10 Length = 155723 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 aaatcttcctgcagaacagat 276 ||||||||||||||||||||| Sbjct: 44355 aaatcttcctgcagaacagat 44375
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 ccaggaccatagcaactaca 480 |||||||||||||||||||| Sbjct: 70415 ccaggaccatagcaactaca 70434
>gb|BC079919.1| Xenopus laevis MGC78853 protein, mRNA (cDNA clone MGC:78853 IMAGE:3403020), complete cds Length = 3476 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tgattcactgaatgtttctt 84 |||||||||||||||||||| Sbjct: 1751 tgattcactgaatgtttctt 1732
>gb|AC183673.2| Pan troglodytes BAC clone CH251-540O10 from chromosome 1, complete sequence Length = 185717 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 tgtatatttgtgctttgtct 528 |||||||||||||||||||| Sbjct: 77135 tgtatatttgtgctttgtct 77154
>gb|AC161289.2| Pan troglodytes BAC clone CH251-170B19 from chromosome 7, complete sequence Length = 151213 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ttcattttcttctccagaaa 353 |||||||||||||||||||| Sbjct: 83638 ttcattttcttctccagaaa 83619
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctgagcatttttctcctcat 454 |||||||||||||||||||| Sbjct: 63215 ctgagcatttttctcctcat 63234
>gb|AC183672.2| Pan troglodytes BAC clone CH251-546K4 from chromosome 7, complete sequence Length = 231124 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ttcattttcttctccagaaa 353 |||||||||||||||||||| Sbjct: 56287 ttcattttcttctccagaaa 56306
>gb|AC122418.4| Mus musculus BAC clone RP24-159E6 from chromosome 13, complete sequence Length = 221980 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ggctatccttcattttcttc 345 |||||||||||||||||||| Sbjct: 220530 ggctatccttcattttcttc 220511
>gb|AC146024.3| Pan troglodytes BAC clone RP43-119C21 from 7, complete sequence Length = 139947 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ttcattttcttctccagaaa 353 |||||||||||||||||||| Sbjct: 59626 ttcattttcttctccagaaa 59645
>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence Length = 177402 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atgaaacaaaataacagttt 112 |||||||||||||||||||| Sbjct: 101716 atgaaacaaaataacagttt 101697
>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence Length = 163782 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atgaaacaaaataacagttt 112 |||||||||||||||||||| Sbjct: 103233 atgaaacaaaataacagttt 103214
>gb|AC004128.1| Homo sapiens PAC clone RP5-850G1 from 7, complete sequence Length = 93904 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ttcattttcttctccagaaa 353 |||||||||||||||||||| Sbjct: 7858 ttcattttcttctccagaaa 7839
>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence Length = 204813 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 atgaaacaaaataacagttt 112 |||||||||||||||||||| Sbjct: 135142 atgaaacaaaataacagttt 135161
>emb|AL137789.11| Human DNA sequence from clone RP11-57I17 on chromosome 1q32.1-32.3 Contains the 3' end of the CR1 gene for complement component (3b/4b) receptor 1, including Knops blood group system, a membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) (MCP) pseudogene and the 5' end of the CR1L gene for complement component (3b/4b) receptor 1-like, complete sequence Length = 145325 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 tgtatatttgtgctttgtct 528 |||||||||||||||||||| Sbjct: 4644 tgtatatttgtgctttgtct 4663
>gb|AC183922.3| Pan troglodytes BAC clone CH251-344F10 from chromosome unknown, complete sequence Length = 146184 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ttcattttcttctccagaaa 353 |||||||||||||||||||| Sbjct: 143853 ttcattttcttctccagaaa 143872
>emb|BX321911.6| Mouse DNA sequence from clone RP23-255M6 on chromosome 11 Contains a ribosomal protein L22 (Rpl22) pseudogene, complete sequence Length = 56399 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aatgattcactgaatgtttc 82 |||||||||||||||||||| Sbjct: 22547 aatgattcactgaatgtttc 22566
>gb|AY128534.1| Homo sapiens cyclin-dependent kinase 6 (CDK6) gene, complete cds Length = 220803 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ttcattttcttctccagaaa 353 |||||||||||||||||||| Sbjct: 137943 ttcattttcttctccagaaa 137962
>gb|AC161266.2| Mus musculus BAC clone RP23-231B13 from chromosome 13, complete sequence Length = 190192 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 ggctatccttcattttcttc 345 |||||||||||||||||||| Sbjct: 129910 ggctatccttcattttcttc 129929
>gb|AC149040.2| Medicago truncatula chromosome 7 BAC clone mth2-9f22, complete sequence Length = 120423 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 acagattgcaatgcagaaat 290 |||||||||||||||||||| Sbjct: 55920 acagattgcaatgcagaaat 55901
>gb|AC092598.2| Homo sapiens BAC clone RP11-114B11 from 2, complete sequence Length = 164798 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 attgcttcctgctccttaag 377 |||||||||||||||||||| Sbjct: 40377 attgcttcctgctccttaag 40358
>ref|XM_574455.1| PREDICTED: Rattus norvegicus similar to hypothetical protein (LOC499157), mRNA Length = 1040 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 tctcggtagccttgaaatcttcct 265 ||||||||||||||||| |||||| Sbjct: 92 tctcggtagccttgaaaccttcct 69
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctgagcatttttctcctcat 454 |||||||||||||||||||| Sbjct: 62490 ctgagcatttttctcctcat 62509
>gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, complete sequence Length = 184453 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 ccaggaccatagcaactaca 480 |||||||||||||||||||| Sbjct: 24184 ccaggaccatagcaactaca 24165
>gb|AC154868.3| Monodelphis domestica, clone XX-211C4, complete sequence Length = 129158 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 aatgattcactgaatgtttc 82 |||||||||||||||||||| Sbjct: 41089 aatgattcactgaatgtttc 41070
>gb|AC133955.4| Mus musculus BAC clone RP23-249M4 from 6, complete sequence Length = 185272 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 ttgccttgtgtccaaagaag 408 |||||||||||||||||||| Sbjct: 100118 ttgccttgtgtccaaagaag 100137 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,235,870 Number of Sequences: 3902068 Number of extensions: 6235870 Number of successful extensions: 150096 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 149846 Number of HSP's gapped (non-prelim): 232 length of query: 615 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 592 effective length of database: 17,143,297,704 effective search space: 10148832240768 effective search space used: 10148832240768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
