>ref|XM_512502.1| PREDICTED: Pan troglodytes similar to Janus kinase 3 (LOC455848),
           mRNA
          Length = 3642

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 345 ccagcggccgggagagctgcagaagac 371
           |||||||||||||||||||| ||||||
Sbjct: 690 ccagcggccgggagagctgctgaagac 716

>ref|NM_000215.2| Homo sapiens Janus kinase 3 (a protein tyrosine kinase, leukocyte)
           (JAK3), mRNA
          Length = 4025

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 345 ccagcggccgggagagctgcagaagac 371
           |||||||||||||||||||| ||||||
Sbjct: 593 ccagcggccgggagagctgctgaagac 619

>gb|BC028068.1| Homo sapiens Janus kinase 3 (a protein tyrosine kinase, leukocyte),
           mRNA (cDNA clone MGC:39993 IMAGE:5212575), complete cds
          Length = 2881

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 345 ccagcggccgggagagctgcagaagac 371
           |||||||||||||||||||| ||||||
Sbjct: 624 ccagcggccgggagagctgctgaagac 650

>gb|AF513860.1| Homo sapiens Janus kinase 3 (a protein tyrosine kinase, leukocyte)
            (JAK3) gene, complete cds
          Length = 21323

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 345  ccagcggccgggagagctgcagaagac 371
            |||||||||||||||||||| ||||||
Sbjct: 3732 ccagcggccgggagagctgctgaagac 3758

>gb|AC007201.1|AC007201 Homo sapiens chromosome 19, cosmid R34383, complete sequence
          Length = 41006

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 345   ccagcggccgggagagctgcagaagac 371
             |||||||||||||||||||| ||||||
Sbjct: 22825 ccagcggccgggagagctgctgaagac 22799

>gb|U70065.1|HSU70065 Human JAK3 gene, complete cds
          Length = 13562

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 345  ccagcggccgggagagctgcagaagac 371
            |||||||||||||||||||| ||||||
Sbjct: 1575 ccagcggccgggagagctgctgaagac 1601

>gb|U31601.1|HSU31601 Human tyrosine protein kinase (Jak3B) splice variant mRNA, complete
           cds
          Length = 3620

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 345 ccagcggccgggagagctgcagaagac 371
           |||||||||||||||||||| ||||||
Sbjct: 629 ccagcggccgggagagctgctgaagac 655

>gb|U09607.1|HSU09607 Human JAK family protein tyrosine kinase (JAK3) mRNA, complete cds
          Length = 4064

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 345 ccagcggccgggagagctgcagaagac 371
           |||||||||||||||||||| ||||||
Sbjct: 629 ccagcggccgggagagctgctgaagac 655

>gb|AC138767.7| Mus musculus chromosome 12, clone RP23-454K24, complete sequence
          Length = 192692

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 388    gaggtagcagcaggaggatcggggag 413
              ||||||| ||||||||||||||||||
Sbjct: 126142 gaggtagaagcaggaggatcggggag 126117

>gb|AC163677.2| Mus musculus BAC clone RP24-86D16 from chromosome 17, complete sequence
          Length = 222584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 383    caggagaggtagcagcaggaggatc 407
              |||||||||||| ||||||||||||
Sbjct: 172569 caggagaggtagaagcaggaggatc 172545

>gb|AC171016.2| Gallus gallus BAC clone CH261-29C12 from chromosome ul, complete sequence
          Length = 168140

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 156    gcagcaggagatggggtccag 176
              |||||||||||||||||||||
Sbjct: 127691 gcagcaggagatggggtccag 127711

>gb|U57096.1|HSU57096 Human janus kinase 3 (Jak3) mRNA, partial cds
          Length = 466

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 345 ccagcggccgggagagctgcagaag 369
           |||||||||||||||||||| ||||
Sbjct: 426 ccagcggccgggagagctgctgaag 450

>gb|AC138367.14| Mus musculus chromosome 8, clone RP23-296G24, complete sequence
          Length = 177856

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   gcgccctgaggaacagcagc 134
             ||||||||||||||||||||
Sbjct: 79886 gcgccctgaggaacagcagc 79867

>gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome 3, complete sequence
          Length = 218807

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    gaggtagcagcaggaggatc 407
              ||||||||||||||||||||
Sbjct: 201410 gaggtagcagcaggaggatc 201391

>emb|AL591791.1|SME591791 Sinorhizobium meliloti 1021 complete chromosome; segment 10/12
          Length = 340900

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     gtgcaggcaaggcggacggg 47
              ||||||||||||||||||||
Sbjct: 110190 gtgcaggcaaggcggacggg 110171

>gb|AC131746.3| Mus musculus BAC clone RP23-62F20 from 3, complete sequence
          Length = 201620

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    gaggtagcagcaggaggatc 407
              ||||||||||||||||||||
Sbjct: 107129 gaggtagcagcaggaggatc 107148

>gb|AC106787.2| Homo sapiens chromosome 5 clone RP11-365I6, complete sequence
          Length = 129667

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    gaaatagaacgggcaaagca 79
             ||||||||||||||||||||
Sbjct: 84909 gaaatagaacgggcaaagca 84890

>gb|AC003998.1|AC003998 Human PAC clone RP1-161J9 from 5q31, complete sequence
          Length = 138965

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    gaaatagaacgggcaaagca 79
             ||||||||||||||||||||
Sbjct: 31934 gaaatagaacgggcaaagca 31953

>gb|AC007126.6|AC007126 Homo sapiens chromosome 4 clone C0496D08, complete sequence
          Length = 218698

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    ggagagctgcagaagacctg 374
              ||||||||||||||||||||
Sbjct: 144138 ggagagctgcagaagacctg 144119

>gb|AC119267.8| Mus musculus chromosome 8, clone RP24-322H19, complete sequence
          Length = 191277

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    gcgccctgaggaacagcagc 134
              ||||||||||||||||||||
Sbjct: 186030 gcgccctgaggaacagcagc 186011

>emb|AL773560.9| Pig DNA sequence from clone XX-514B12, complete sequence
          Length = 107413

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   cctgcgggcctgcaggagag 390
             ||||||||||||||||||||
Sbjct: 43550 cctgcgggcctgcaggagag 43531

>gb|AC112265.5| Mus musculus BAC clone RP23-421N20 from 10, complete sequence
          Length = 203204

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 387   agaggtagcagcaggaggatcggg 410
             |||||||| |||||||||||||||
Sbjct: 18216 agaggtagaagcaggaggatcggg 18193

>emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on chromosome 2, complete
            sequence
          Length = 201671

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 388  gaggtagcagcaggaggatc 407
            ||||||||||||||||||||
Sbjct: 4505 gaggtagcagcaggaggatc 4486


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,583,067
Number of Sequences: 3902068
Number of extensions: 3583067
Number of successful extensions: 62022
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61984
Number of HSP's gapped (non-prelim): 38
length of query: 429
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 407
effective length of database: 17,147,199,772
effective search space: 6978910307204
effective search space used: 6978910307204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)