ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20e15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466018.1| Oryza sativa (japonica cultivar-group), mRNA 307 2e-80
2dbj|AK121782.1| Oryza sativa (japonica cultivar-group) cDNA clon... 307 2e-80
3gb|AY106720.1| Zea mays PCO113091 mRNA sequence 280 6e-72
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
6dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
7dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 137 5e-29
9emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa... 137 5e-29
10emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 137 5e-29
11ref|NM_101907.2| Arabidopsis thaliana transferase, transferring ... 46 0.14
12gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana... 46 0.14
13gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana... 46 0.14
14gb|AC138596.13| Mus musculus chromosome 1, clone RP24-287G17, co... 44 0.57
15gb|AC013264.4| Homo sapiens BAC clone RP11-184N4 from 2, complet... 44 0.57
16gb|AC160959.5| Mus musculus BAC clone RP24-230N7 from chromosome... 44 0.57
17gb|AC123726.11| Mus musculus chromosome 3, clone RP23-436F15, co... 42 2.2
18gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete... 42 2.2
19gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome... 42 2.2
20gb|AC159381.10| Mus musculus 6 BAC RP24-460E4 (Roswell Park Canc... 40 8.9
21gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosom... 40 8.9
22gb|AC138722.3| Mus musculus BAC clone RP23-113B10 from chromosom... 40 8.9
23gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, co... 40 8.9
24emb|AL451064.6| Human DNA sequence from clone RP11-177G23 on chr... 40 8.9
25gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 8.9
26gb|AC091536.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 8.9
27gb|AC091617.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 8.9
28emb|AL109914.16|HSBA27F12 Human DNA sequence from clone RP11-27F... 40 8.9
29gb|BT009330.1| Triticum aestivum clone wlm24.pk0026.a3:fis, full... 40 8.9
30emb|AL590445.1|CNS07EGC chromosome V of strain GB-M1 of Encephal... 40 8.9
31gb|AC099689.4| Homo sapiens chromosome 18, clone RP11-849I19, co... 40 8.9
32gb|AC097379.2| Homo sapiens BAC clone RP11-277G18 from 4, comple... 40 8.9
33emb|AL114785.1|CNS01BWP Botrytis cinerea strain T4 cDNA library 40 8.9
34emb|AL114137.1|CNS01BEP Botrytis cinerea strain T4 cDNA library 40 8.9
35gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, comple... 40 8.9
36gb|AC154785.2| Mus musculus BAC clone RP23-92M20 from chromosome... 40 8.9
37gb|AC157658.2| Mus musculus BAC clone RP23-331E4 from chromosome... 40 8.9
38dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
39dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 8.9
40gb|AC170088.9| Mus musculus BAC RP23-94A1 (Roswell Park Cancer ... 40 8.9 
>ref|XM_466018.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3627

 Score =  307 bits (155), Expect = 2e-80
 Identities = 335/395 (84%)
 Strand = Plus / Minus

                                                                        
Query: 257  ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 316
            |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 3351 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 3292

                                                                        
Query: 317  gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatcctc 376
            || || | |||||| |||||||| ||||| || || || ||||||||||||||||||| |
Sbjct: 3291 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatccgc 3232

                                                                        
Query: 377  aagaggaacacgacgcactcgtcgaattgcttctcgatccgatccaactccatctcgcat 436
            | ||| || || ||||||||||| |||||||||||||| |||||||  ||||||||||||
Sbjct: 3231 aggagaaatacaacgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcat 3172

                                                                        
Query: 437  cttgccctaacagatgccgcggtccctccggtgccgagagtttgctccacattgtggaag 496
            |||||| | || | ||  || || || || || || ||||| || || |  |||||||||
Sbjct: 3171 cttgccttgacggctggagcagttccaccagtaccaagagtctgttctatgttgtggaag 3112

                                                                        
Query: 497  tctaacgccaatcccagtatagtcttgactcgactggcgatcagagcccacaacttatcc 556
            || |  |||||||| || || ||||| ||||||||||| || || |||||||||||||| 
Sbjct: 3111 tcaagtgccaatccaagaatggtcttaactcgactggctatgagggcccacaacttatca 3052

                                                                        
Query: 557  gaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaacttccatgact 616
            ||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||
Sbjct: 3051 gaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaacttccatgact 2992

                                               
Query: 617  tcatctaatgtagtagcagatgccatgccatcaca 651
            ||||| | |||||| || |||||||||||||||||
Sbjct: 2991 tcatccagtgtagtggcggatgccatgccatcaca 2957
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>dbj|AK121782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093P19, full
            insert sequence
          Length = 3628

 Score =  307 bits (155), Expect = 2e-80
 Identities = 335/395 (84%)
 Strand = Plus / Minus

                                                                        
Query: 257  ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 316
            |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 3352 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 3293

                                                                        
Query: 317  gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatcctc 376
            || || | |||||| |||||||| ||||| || || || ||||||||||||||||||| |
Sbjct: 3292 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatccgc 3233

                                                                        
Query: 377  aagaggaacacgacgcactcgtcgaattgcttctcgatccgatccaactccatctcgcat 436
            | ||| || || ||||||||||| |||||||||||||| |||||||  ||||||||||||
Sbjct: 3232 aggagaaatacaacgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcat 3173

                                                                        
Query: 437  cttgccctaacagatgccgcggtccctccggtgccgagagtttgctccacattgtggaag 496
            |||||| | || | ||  || || || || || || ||||| || || |  |||||||||
Sbjct: 3172 cttgccttgacggctggagcagttccaccagtaccaagagtctgttctatgttgtggaag 3113

                                                                        
Query: 497  tctaacgccaatcccagtatagtcttgactcgactggcgatcagagcccacaacttatcc 556
            || |  |||||||| || || ||||| ||||||||||| || || |||||||||||||| 
Sbjct: 3112 tcaagtgccaatccaagaatggtcttaactcgactggctatgagggcccacaacttatca 3053

                                                                        
Query: 557  gaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaacttccatgact 616
            ||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||
Sbjct: 3052 gaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaacttccatgact 2993

                                               
Query: 617  tcatctaatgtagtagcagatgccatgccatcaca 651
            ||||| | |||||| || |||||||||||||||||
Sbjct: 2992 tcatccagtgtagtggcggatgccatgccatcaca 2958
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>gb|AY106720.1| Zea mays PCO113091 mRNA sequence
          Length = 916

 Score =  280 bits (141), Expect = 6e-72
 Identities = 336/401 (83%)
 Strand = Plus / Minus

                                                                       
Query: 251 cgggacccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttg 310
           ||||||||||| || |||| |||||| ||  | ||||||||| ||||||||||||| |||
Sbjct: 708 cgggacccaggaatagcagagaagctcccactatcagacatgaaatagtgattgtaattg 649

                                                                       
Query: 311 atcctcgtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagatagg 370
           ||||| || || | ||| || |||||||| || || ||||| || |||||||||||||||
Sbjct: 648 atccttgtaactagatcggcaagatgggggaaatgacccacattgagcttgaaagatagg 589

                                                                       
Query: 371 atcctcaagaggaacacgacgcactcgtcgaattgcttctcgatccgatccaactccatc 430
           ||||||| ||| || | ||| ||||| || ||||||||||| ||||| || |  ||||||
Sbjct: 588 atcctcaggagaaatatgacacactcatcaaattgcttctcaatccggtcgatttccatc 529

                                                                       
Query: 431 tcgcatcttgccctaacagatgccgcggtccctccggtgccgagagtttgctccacattg 490
           ||||||| || ||| |||| ||  || ||||| ||||| | ||||||||| || ||||||
Sbjct: 528 tcgcatcgtgtcctcacagctgaagccgtcccaccggtactgagagtttgttctacattg 469

                                                                       
Query: 491 tggaagtctaacgccaatcccagtatagtcttgactcgactggcgatcagagcccacaac 550
           |||||||| |  |||||||| || |||||||| ||||||||||| || || ||||||| |
Sbjct: 468 tggaagtccagtgccaatccaagaatagtcttaactcgactggcaatgagggcccacagc 409

                                                                       
Query: 551 ttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaacttcc 610
           ||||| |||||||||||||||||||  ||||||||||| ||||||||||| |||||||||
Sbjct: 408 ttatcagaggccacaaagcattgtcgttgaatagaagagagatatgcctcgtgaacttcc 349

                                                    
Query: 611 atgacttcatctaatgtagtagcagatgccatgccatcaca 651
           ||||||||||| | ||| |||||||  | ||||||||||||
Sbjct: 348 atgacttcatccagtgtggtagcagccgtcatgccatcaca 308
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  137 bits (69), Expect = 5e-29
 Identities = 96/105 (91%)
 Strand = Plus / Minus

                                                                            
Query: 547      caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 606
                ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 25644451 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 25644392

                                                             
Query: 607      ttccatgacttcatctaatgtagtagcagatgccatgccatcaca 651
                ||||||||||||||| | |||||| || |||||||||||||||||
Sbjct: 25644391 ttccatgacttcatccagtgtagtggcggatgccatgccatcaca 25644347



 Score =  113 bits (57), Expect = 7e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                            
Query: 257      ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 316
                |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 25644945 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 25644886

                                                                         
Query: 317      gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 373
                || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 25644885 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 25644829



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                      
Query: 389      acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 442
                ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 25644706 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 25644653
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  137 bits (69), Expect = 5e-29
 Identities = 96/105 (91%)
 Strand = Plus / Plus

                                                                            
Query: 547      caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 606
                ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 19111189 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 19111248

                                                             
Query: 607      ttccatgacttcatctaatgtagtagcagatgccatgccatcaca 651
                ||||||||||||||| | |||||| || |||||||||||||||||
Sbjct: 19111249 ttccatgacttcatccagtgtagtggcggatgccatgccatcaca 19111293



 Score =  113 bits (57), Expect = 7e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                            
Query: 257      ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 316
                |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 19110696 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 19110755

                                                                         
Query: 317      gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 373
                || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 19110756 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 19110812



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                      
Query: 389      acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 442
                ||||||||||| |||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 19110928 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcatcttgcc 19110981
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>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0415B12
          Length = 157419

 Score =  137 bits (69), Expect = 5e-29
 Identities = 96/105 (91%)
 Strand = Plus / Plus

                                                                        
Query: 547  caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 606
            ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 9438 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 9497

                                                         
Query: 607  ttccatgacttcatctaatgtagtagcagatgccatgccatcaca 651
            ||||||||||||||| | |||||| || |||||||||||||||||
Sbjct: 9498 ttccatgacttcatccagtgtagtggcggatgccatgccatcaca 9542



 Score =  113 bits (57), Expect = 7e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                        
Query: 257  ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 316
            |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 8945 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 9004

                                                                     
Query: 317  gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 373
            || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 9005 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 9061



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                  
Query: 389  acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 442
            ||||||||||| |||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 9177 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcatcttgcc 9230
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>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score =  137 bits (69), Expect = 5e-29
 Identities = 96/105 (91%)
 Strand = Plus / Plus

                                                                          
Query: 547    caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 606
              ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 116710 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 116769

                                                           
Query: 607    ttccatgacttcatctaatgtagtagcagatgccatgccatcaca 651
              ||||||||||||||| | |||||| || |||||||||||||||||
Sbjct: 116770 ttccatgacttcatccagtgtagtggcggatgccatgccatcaca 116814



 Score =  113 bits (57), Expect = 7e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                          
Query: 257    ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 316
              |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 116217 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 116276

                                                                       
Query: 317    gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 373
              || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 116277 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 116333



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                    
Query: 389    acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 442
              ||||||||||| |||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 116449 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcatcttgcc 116502
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  137 bits (69), Expect = 5e-29
 Identities = 96/105 (91%)
 Strand = Plus / Minus

                                                                            
Query: 547      caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 606
                ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 25572627 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 25572568

                                                             
Query: 607      ttccatgacttcatctaatgtagtagcagatgccatgccatcaca 651
                ||||||||||||||| | |||||| || |||||||||||||||||
Sbjct: 25572567 ttccatgacttcatccagtgtagtggcggatgccatgccatcaca 25572523



 Score =  113 bits (57), Expect = 7e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                            
Query: 257      ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 316
                |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 25573121 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 25573062

                                                                         
Query: 317      gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 373
                || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 25573061 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 25573005



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                      
Query: 389      acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 442
                ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 25572882 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 25572829
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>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 167131

 Score =  137 bits (69), Expect = 5e-29
 Identities = 96/105 (91%)
 Strand = Plus / Minus

                                                                         
Query: 547   caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 606
             ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 11689 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 11630

                                                          
Query: 607   ttccatgacttcatctaatgtagtagcagatgccatgccatcaca 651
             ||||||||||||||| | |||||| || |||||||||||||||||
Sbjct: 11629 ttccatgacttcatccagtgtagtggcggatgccatgccatcaca 11585



 Score =  113 bits (57), Expect = 7e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                         
Query: 257   ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 316
             |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 12183 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 12124

                                                                      
Query: 317   gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 373
             || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 12123 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 12067



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 389   acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 442
             ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 11944 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 11891
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>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127003

 Score =  137 bits (69), Expect = 5e-29
 Identities = 96/105 (91%)
 Strand = Plus / Plus

                                                                         
Query: 547   caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 606
             ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 29267 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 29326

                                                          
Query: 607   ttccatgacttcatctaatgtagtagcagatgccatgccatcaca 651
             ||||||||||||||| | |||||| || |||||||||||||||||
Sbjct: 29327 ttccatgacttcatccagtgtagtggcggatgccatgccatcaca 29371



 Score =  113 bits (57), Expect = 7e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                         
Query: 257   ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 316
             |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 28773 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 28832

                                                                      
Query: 317   gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 373
             || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 28833 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 28889



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 389   acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 442
             ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 29012 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 29065
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>ref|NM_101907.2| Arabidopsis thaliana transferase, transferring glycosyl groups /
            tubulin binding AT1G20570 mRNA, complete cds
          Length = 2931

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 273  agcttccggtgtcagacatgtaatagtgattgtagttgatcctcgtgaccaaatccgcga 332
            ||||||| |||||||||||||| |  | |||||| ||||| || || |||||||| || |
Sbjct: 2908 agcttccagtgtcagacatgtagtgataattgtaattgattctggtcaccaaatcagcca 2849

                               
Query: 333  gatggggaaagtggcccac 351
            |||| || ||||| |||||
Sbjct: 2848 gatgagggaagtgtcccac 2830
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>gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana BAC F2D10 from chromosome I,
             complete sequence
          Length = 143879

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                         
Query: 273   agcttccggtgtcagacatgtaatagtgattgtagttgatcctcgtgaccaaatccgcga 332
             ||||||| |||||||||||||| |  | |||||| ||||| || || |||||||| || |
Sbjct: 12499 agcttccagtgtcagacatgtagtgataattgtaattgattctggtcaccaaatcagcca 12558

                                
Query: 333   gatggggaaagtggcccac 351
             |||| || ||||| |||||
Sbjct: 12559 gatgagggaagtgtcccac 12577
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>gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana BAC F5M15 from chromosome I,
             complete sequence
          Length = 99231

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                         
Query: 273   agcttccggtgtcagacatgtaatagtgattgtagttgatcctcgtgaccaaatccgcga 332
             ||||||| |||||||||||||| |  | |||||| ||||| || || |||||||| || |
Sbjct: 42616 agcttccagtgtcagacatgtagtgataattgtaattgattctggtcaccaaatcagcca 42557

                                
Query: 333   gatggggaaagtggcccac 351
             |||| || ||||| |||||
Sbjct: 42556 gatgagggaagtgtcccac 42538
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>gb|AC138596.13| Mus musculus chromosome 1, clone RP24-287G17, complete sequence
          Length = 151611

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 25     caatctcttcaacatactcaca 46
              ||||||||||||||||||||||
Sbjct: 131912 caatctcttcaacatactcaca 131933
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>gb|AC013264.4| Homo sapiens BAC clone RP11-184N4 from 2, complete sequence
          Length = 149445

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 198   ccacaaatggagctgaaaagca 219
             ||||||||||||||||||||||
Sbjct: 53521 ccacaaatggagctgaaaagca 53500
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>gb|AC160959.5| Mus musculus BAC clone RP24-230N7 from chromosome 1, complete sequence
          Length = 153369

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 25    caatctcttcaacatactcaca 46
             ||||||||||||||||||||||
Sbjct: 73980 caatctcttcaacatactcaca 74001
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>gb|AC123726.11| Mus musculus chromosome 3, clone RP23-436F15, complete sequence
          Length = 224297

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    aaacccaaggaattcaggaac 150
              |||||||||||||||||||||
Sbjct: 111724 aaacccaaggaattcaggaac 111744
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>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 475   agtttgctccacattgtggaagtct 499
             |||||||||||| ||||||||||||
Sbjct: 56861 agtttgctccactttgtggaagtct 56837
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>gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome 18, complete sequence
          Length = 209529

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 612   tgacttcatctaatgtagtag 632
             |||||||||||||||||||||
Sbjct: 29390 tgacttcatctaatgtagtag 29410
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>gb|AC159381.10| Mus musculus 6 BAC RP24-460E4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 211463

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 43     cacacatacactgaaacttgggaa 66
              |||||| |||||||||||||||||
Sbjct: 145560 cacacacacactgaaacttgggaa 145583
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>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete
             sequence
          Length = 184079

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    tcaacatactcacacataca 52
             ||||||||||||||||||||
Sbjct: 56869 tcaacatactcacacataca 56888
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>gb|AC138722.3| Mus musculus BAC clone RP23-113B10 from chromosome 16, complete
             sequence
          Length = 227299

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    catactcacacatacactga 56
             ||||||||||||||||||||
Sbjct: 89007 catactcacacatacactga 88988
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>gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, complete sequence
          Length = 206979

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    tcaacatactcacacataca 52
             ||||||||||||||||||||
Sbjct: 18738 tcaacatactcacacataca 18719
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>emb|AL451064.6| Human DNA sequence from clone RP11-177G23 on chromosome 6 Contains the
             the 5' end of the SH3BGRL2 gene for SH3 domain binding
             glutamic acid-rich protein-like 2 and a CpG island,
             complete sequence
          Length = 79743

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    gaagacccaatctcttcaac 37
             ||||||||||||||||||||
Sbjct: 33171 gaagacccaatctcttcaac 33152
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 307     gttgatcctcgtgaccaaatccgc 330
               |||||||||||||| |||||||||
Sbjct: 2090024 gttgatcctcgtgatcaaatccgc 2090047
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>gb|AC091536.2| Rattus norvegicus strain Brown Norway clone RP31-547A5, complete
           sequence
          Length = 175512

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 34  caacatactcacacatacac 53
           ||||||||||||||||||||
Sbjct: 832 caacatactcacacatacac 813



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 34  caacatactcacacatacac 53
           ||||||||||||||||||||
Sbjct: 342 caacatactcacacatacac 323
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>gb|AC091617.2| Rattus norvegicus strain Brown Norway clone RP31-371K3, complete sequence
          Length = 150494

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     caacatactcacacatacac 53
              ||||||||||||||||||||
Sbjct: 150220 caacatactcacacatacac 150201



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     caacatactcacacatacac 53
              ||||||||||||||||||||
Sbjct: 149730 caacatactcacacatacac 149711
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>emb|AL109914.16|HSBA27F12 Human DNA sequence from clone RP11-27F12 on chromosome 6p22.3-24
             Contains the 5' end of a novel gene, complete sequence
          Length = 123489

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   tacatcctcagaattgtgtggtac 127
             |||||||||||||||||| |||||
Sbjct: 88856 tacatcctcagaattgtgaggtac 88879
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>gb|BT009330.1| Triticum aestivum clone wlm24.pk0026.a3:fis, full insert mRNA
            sequence
          Length = 1958

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 621  ctaatgtagtagcagatgcc 640
            ||||||||||||||||||||
Sbjct: 1282 ctaatgtagtagcagatgcc 1263
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>emb|AL590445.1|CNS07EGC chromosome V of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 211018

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    caatctcttcaacatactca 44
             ||||||||||||||||||||
Sbjct: 71244 caatctcttcaacatactca 71263
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>gb|AC099689.4| Homo sapiens chromosome 18, clone RP11-849I19, complete sequence
          Length = 201519

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    acatactcacacatacactgaaac 59
             ||||||||||||||||||| ||||
Sbjct: 74690 acatactcacacatacactcaaac 74713
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>gb|AC097379.2| Homo sapiens BAC clone RP11-277G18 from 4, complete sequence
          Length = 96080

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    tactcacacatacactgaaacttg 62
             |||||||||||||| |||||||||
Sbjct: 60061 tactcacacatacattgaaacttg 60084
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>emb|AL114785.1|CNS01BWP Botrytis cinerea strain T4 cDNA library
          Length = 840

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 369 ggatcctcaagaggaacacg 388
           ||||||||||||||||||||
Sbjct: 223 ggatcctcaagaggaacacg 204
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>emb|AL114137.1|CNS01BEP Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 369 ggatcctcaagaggaacacg 388
           ||||||||||||||||||||
Sbjct: 203 ggatcctcaagaggaacacg 184
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>gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, complete sequence
          Length = 200028

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 561    ccacaaagcattgtctctga 580
              ||||||||||||||||||||
Sbjct: 187344 ccacaaagcattgtctctga 187363
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>gb|AC154785.2| Mus musculus BAC clone RP23-92M20 from chromosome 12, complete sequence
          Length = 231183

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     caacatactcacacatacac 53
              ||||||||||||||||||||
Sbjct: 220876 caacatactcacacatacac 220895
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>gb|AC157658.2| Mus musculus BAC clone RP23-331E4 from chromosome 12, complete sequence
          Length = 203717

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    caacatactcacacatacac 53
             ||||||||||||||||||||
Sbjct: 51822 caacatactcacacatacac 51841
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>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1642C07
          Length = 206004

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 621   ctaatgtagtagcagatgcc 640
             ||||||||||||||||||||
Sbjct: 58887 ctaatgtagtagcagatgcc 58868
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>dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-807E13, complete
             sequence
          Length = 182382

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 232   tcaaggctgctgccgagcac 251
             ||||||||||||||||||||
Sbjct: 52440 tcaaggctgctgccgagcac 52421
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>gb|AC170088.9| Mus musculus  BAC RP23-94A1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 253441

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    cacacatacactgaaacttgggaa 66
             |||||| |||||||||||||||||
Sbjct: 27692 cacacacacactgaaacttgggaa 27715


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,403,156
Number of Sequences: 3902068
Number of extensions: 5403156
Number of successful extensions: 103965
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103780
Number of HSP's gapped (non-prelim): 185
length of query: 651
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 628
effective length of database: 17,143,297,704
effective search space: 10765990958112
effective search space used: 10765990958112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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