ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 682 0.0
2ref|XM_467400.1| Oryza sativa (japonica cultivar-group), mRNA 394 e-106
3dbj|AK068408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 394 e-106
4gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence 204 2e-49
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
6dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
7dbj|AP006694.1| Lotus japonicus genomic DNA, chromosome 2, clone... 56 1e-04
8ref|XM_463817.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
9dbj|AB110187.1| Oryza sativa (japonica cultivar-group) mRNA for ... 52 0.002
10dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
12dbj|AK069014.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
13gb|BT012689.1| Lycopersicon esculentum clone 113539R, mRNA sequence 48 0.028
14gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete se... 42 1.7
15gb|AC092354.2| Homo sapiens chromosome 5 clone RP11-307L14, comp... 42 1.7
16dbj|AP002456.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 1.7
17dbj|AP001929.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.7
18gb|AY150042.1| Lycopersicon esculentum kinesin light chain I2I i... 42 1.7
19gb|AF104455.1| Homo sapiens chromosome 7qtelo BAC F6, complete s... 40 6.9
20gb|U63834.1|HSU63834 Human KIT protein and alternatively spliced... 40 6.9
21ref|XM_741487.1| Aspergillus fumigatus Af293 cysteine synthase B... 40 6.9
22gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome... 40 6.9
23emb|AL359977.16| Human DNA sequence from clone RP11-116M11 on ch... 40 6.9
24emb|AL354978.20| Human DNA sequence from clone RP11-266I14 on ch... 40 6.9
25emb|AJ704460.1| Asclepias curassavica chloroplast partial trnT-L... 40 6.9
26gb|AC160145.6| Mus musculus 10 BAC RP24-160D12 (Roswell Park Can... 40 6.9
27gb|AY623764.1| Rattus norvegicus Defa12-ps pseudogene, complete ... 40 6.9
28gb|AY623759.1| Rattus norvegicus defensin alpha 7 (Defa7) gene, ... 40 6.9
29ref|XM_685440.1| PREDICTED: Danio rerio similar to Microtubule-a... 40 6.9
30gb|AC132139.4| Mus musculus BAC clone RP23-181A24 from chromosom... 40 6.9
31gb|AC158356.2| Mus musculus BAC clone RP23-475P8 from chromosome... 40 6.9
32gb|AC148700.1| Macaca mulatta Major Histocompatibility Complex B... 40 6.9
33gb|AC122719.2| Homo sapiens chromosome 5 clone RP11-661C8, compl... 40 6.9
34dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 40 6.9
35emb|BX511004.9| Zebrafish DNA sequence from clone RP71-45K5 in l... 40 6.9
36gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 ... 40 6.9
37gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 40 6.9
38emb|AL732449.5| Mouse DNA sequence from clone RP23-191F11 on chr... 40 6.9 
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
             complete sequence
          Length = 102842

 Score =  682 bits (344), Expect = 0.0
 Identities = 344/344 (100%)
 Strand = Plus / Minus

                                                                         
Query: 9     tgtctcatcctcaagcgctactactattcccatgtacccctatcaccaaatttgaataaa 68
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41881 tgtctcatcctcaagcgctactactattcccatgtacccctatcaccaaatttgaataaa 41822

                                                                         
Query: 69    ccaattgatacacaaattcttagcgtcatagtgttcccttttctctttcattcaaagcta 128
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41821 ccaattgatacacaaattcttagcgtcatagtgttcccttttctctttcattcaaagcta 41762

                                                                         
Query: 129   tagttcactcacgctgcaactgtagtcctctttccaacggtgtatgggttggtcccgaga 188
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41761 tagttcactcacgctgcaactgtagtcctctttccaacggtgtatgggttggtcccgaga 41702

                                                                         
Query: 189   agattttccagggattttgccttcctgcttctcccccggccagcctccttcagcaactcg 248
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41701 agattttccagggattttgccttcctgcttctcccccggccagcctccttcagcaactcg 41642

                                                                         
Query: 249   gcgagcctccgcttctcgtcatcgacgtctgggttcgccgtgcctagcttctcttcacgc 308
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41641 gcgagcctccgcttctcgtcatcgacgtctgggttcgccgtgcctagcttctcttcacgc 41582

                                                         
Query: 309   atttctacgacgtattccaagatctcaatggcctcatccagtct 352
             ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41581 atttctacgacgtattccaagatctcaatggcctcatccagtct 41538



 Score =  315 bits (159), Expect = 8e-83
 Identities = 159/159 (100%)
 Strand = Plus / Minus

                                                                         
Query: 351   cttcccattgcatcataagttccagcaagattgctgtatactcctagagtatctgcatga 410
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40688 cttcccattgcatcataagttccagcaagattgctgtatactcctagagtatctgcatga 40629

                                                                         
Query: 411   tatggcccgtattcttgctccagaacggttctagcttcctcgaagagttctgcagcttca 470
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40628 tatggcccgtattcttgctccagaacggttctagcttcctcgaagagttctgcagcttca 40569

                                                    
Query: 471   tttatggagtatctttgaacacacgccagccccatctgg 509
             |||||||||||||||||||||||||||||||||||||||
Sbjct: 40568 tttatggagtatctttgaacacacgccagccccatctgg 40530
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>ref|XM_467400.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2712

 Score =  394 bits (199), Expect = e-106
 Identities = 304/339 (89%)
 Strand = Plus / Minus

                                                                        
Query: 171  tatgggttggtcccgagaagattttccagggattttgccttcctgcttctcccccggcca 230
            |||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2316 tatgggttggtctcgagcagattctccagggattttgccttcctgcttctcccccgacca 2257

                                                                        
Query: 231  gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 290
            |||||||| || | ||| || ||||||||||| |||||||||||||||||||| || |||
Sbjct: 2256 gcctccttgagtagctctgcaagcctccgcttttcgtcatcgacgtctgggttagctgtg 2197

                                                                        
Query: 291  cctagcttctcttcacgcatttctacgacgtattccaagatctcaatggcctcatccagt 350
            || ||||||||||| |||||  | || || | ||||||||||||||||||||||||||| 
Sbjct: 2196 cccagcttctcttcgcgcatcccaactacatgttccaagatctcaatggcctcatccagc 2137

                                                                        
Query: 351  cttcccattgcatcataagttccagcaagattgctgtatactcctagagtatctgcatga 410
            |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||
Sbjct: 2136 cttcccatggcatcataagttccagcaagattgctgtacactcctaaagtatctggatga 2077

                                                                        
Query: 411  tatggcccgtattcttgctccagaacggttctagcttcctcgaagagttctgcagcttca 470
            || || || ||||||||||||||||| | |||||||||||| || |||||||||||||||
Sbjct: 2076 taaggtccatattcttgctccagaacagctctagcttcctcaaacagttctgcagcttca 2017

                                                   
Query: 471  tttatggagtatctttgaacacacgccagccccatctgg 509
            ||||| ||||||||||||||||| |||| ||||||||||
Sbjct: 2016 tttatcgagtatctttgaacacatgccaaccccatctgg 1978
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>dbj|AK068408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151N03, full
            insert sequence
          Length = 2712

 Score =  394 bits (199), Expect = e-106
 Identities = 304/339 (89%)
 Strand = Plus / Minus

                                                                        
Query: 171  tatgggttggtcccgagaagattttccagggattttgccttcctgcttctcccccggcca 230
            |||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2316 tatgggttggtctcgagcagattctccagggattttgccttcctgcttctcccccgacca 2257

                                                                        
Query: 231  gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 290
            |||||||| || | ||| || ||||||||||| |||||||||||||||||||| || |||
Sbjct: 2256 gcctccttgagtagctctgcaagcctccgcttttcgtcatcgacgtctgggttagctgtg 2197

                                                                        
Query: 291  cctagcttctcttcacgcatttctacgacgtattccaagatctcaatggcctcatccagt 350
            || ||||||||||| |||||  | || || | ||||||||||||||||||||||||||| 
Sbjct: 2196 cccagcttctcttcgcgcatcccaactacatgttccaagatctcaatggcctcatccagc 2137

                                                                        
Query: 351  cttcccattgcatcataagttccagcaagattgctgtatactcctagagtatctgcatga 410
            |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||
Sbjct: 2136 cttcccatggcatcataagttccagcaagattgctgtacactcctaaagtatctggatga 2077

                                                                        
Query: 411  tatggcccgtattcttgctccagaacggttctagcttcctcgaagagttctgcagcttca 470
            || || || ||||||||||||||||| | |||||||||||| || |||||||||||||||
Sbjct: 2076 taaggtccatattcttgctccagaacagctctagcttcctcaaacagttctgcagcttca 2017

                                                   
Query: 471  tttatggagtatctttgaacacacgccagccccatctgg 509
            ||||| ||||||||||||||||| |||| ||||||||||
Sbjct: 2016 tttatcgagtatctttgaacacatgccaaccccatctgg 1978
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>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence
          Length = 158050

 Score =  204 bits (103), Expect = 2e-49
 Identities = 145/159 (91%)
 Strand = Plus / Minus

                                                                         
Query: 351   cttcccattgcatcataagttccagcaagattgctgtatactcctagagtatctgcatga 410
             |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||
Sbjct: 54887 cttcccatggcatcataagttccagcaagattgctgtacactcctaaagtatctggatga 54828

                                                                         
Query: 411   tatggcccgtattcttgctccagaacggttctagcttcctcgaagagttctgcagcttca 470
             || || || ||||||||||||||||| | |||||||||||| || |||||||||||||||
Sbjct: 54827 taaggtccatattcttgctccagaacagctctagcttcctcaaacagttctgcagcttca 54768

                                                    
Query: 471   tttatggagtatctttgaacacacgccagccccatctgg 509
             ||||| ||||||||||||||||| |||| ||||||||||
Sbjct: 54767 tttatcgagtatctttgaacacatgccaaccccatctgg 54729



 Score =  196 bits (99), Expect = 5e-47
 Identities = 159/179 (88%)
 Strand = Plus / Minus

                                                                         
Query: 171   tatgggttggtcccgagaagattttccagggattttgccttcctgcttctcccccggcca 230
             |||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 56035 tatgggttggtctcgagcagattctccagggattttgccttcctgcttctcccccgacca 55976

                                                                         
Query: 231   gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 290
             |||||||| || | ||| || ||||||||||| |||||||||||||||||||| || |||
Sbjct: 55975 gcctccttgagtagctctgcaagcctccgcttttcgtcatcgacgtctgggttagctgtg 55916

                                                                        
Query: 291   cctagcttctcttcacgcatttctacgacgtattccaagatctcaatggcctcatccag 349
             || ||||||||||| |||||  | || || | |||||||||||||||||||||||||||
Sbjct: 55915 cccagcttctcttcgcgcatcccaactacatgttccaagatctcaatggcctcatccag 55857
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  204 bits (103), Expect = 2e-49
 Identities = 145/159 (91%)
 Strand = Plus / Plus

                                                                            
Query: 351      cttcccattgcatcataagttccagcaagattgctgtatactcctagagtatctgcatga 410
                |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||
Sbjct: 29307744 cttcccatggcatcataagttccagcaagattgctgtacactcctaaagtatctggatga 29307803

                                                                            
Query: 411      tatggcccgtattcttgctccagaacggttctagcttcctcgaagagttctgcagcttca 470
                || || || ||||||||||||||||| | |||||||||||| || |||||||||||||||
Sbjct: 29307804 taaggtccatattcttgctccagaacagctctagcttcctcaaacagttctgcagcttca 29307863

                                                       
Query: 471      tttatggagtatctttgaacacacgccagccccatctgg 509
                ||||| ||||||||||||||||| |||| ||||||||||
Sbjct: 29307864 tttatcgagtatctttgaacacatgccaaccccatctgg 29307902



 Score =  196 bits (99), Expect = 5e-47
 Identities = 159/179 (88%)
 Strand = Plus / Plus

                                                                            
Query: 171      tatgggttggtcccgagaagattttccagggattttgccttcctgcttctcccccggcca 230
                |||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 29306596 tatgggttggtctcgagcagattctccagggattttgccttcctgcttctcccccgacca 29306655

                                                                            
Query: 231      gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 290
                |||||||| || | ||| || ||||||||||| |||||||||||||||||||| || |||
Sbjct: 29306656 gcctccttgagtagctctgcaagcctccgcttttcgtcatcgacgtctgggttagctgtg 29306715

                                                                           
Query: 291      cctagcttctcttcacgcatttctacgacgtattccaagatctcaatggcctcatccag 349
                || ||||||||||| |||||  | || || | |||||||||||||||||||||||||||
Sbjct: 29306716 cccagcttctcttcgcgcatcccaactacatgttccaagatctcaatggcctcatccag 29306774



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                          
Query: 231    gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 290
              ||||||||||| | ||| || |||||  |||||||||| ||||| || ||||| || |||
Sbjct: 535390 gcctccttcagaagctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtg 535449

                            
Query: 291    cctagcttctcttc 304
              || |||||||||||
Sbjct: 535450 ccgagcttctcttc 535463
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>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0060O16
          Length = 164373

 Score =  204 bits (103), Expect = 2e-49
 Identities = 145/159 (91%)
 Strand = Plus / Plus

                                                                          
Query: 351    cttcccattgcatcataagttccagcaagattgctgtatactcctagagtatctgcatga 410
              |||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| ||||
Sbjct: 105089 cttcccatggcatcataagttccagcaagattgctgtacactcctaaagtatctggatga 105148

                                                                          
Query: 411    tatggcccgtattcttgctccagaacggttctagcttcctcgaagagttctgcagcttca 470
              || || || ||||||||||||||||| | |||||||||||| || |||||||||||||||
Sbjct: 105149 taaggtccatattcttgctccagaacagctctagcttcctcaaacagttctgcagcttca 105208

                                                     
Query: 471    tttatggagtatctttgaacacacgccagccccatctgg 509
              ||||| ||||||||||||||||| |||| ||||||||||
Sbjct: 105209 tttatcgagtatctttgaacacatgccaaccccatctgg 105247



 Score =  196 bits (99), Expect = 5e-47
 Identities = 159/179 (88%)
 Strand = Plus / Plus

                                                                          
Query: 171    tatgggttggtcccgagaagattttccagggattttgccttcctgcttctcccccggcca 230
              |||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 103941 tatgggttggtctcgagcagattctccagggattttgccttcctgcttctcccccgacca 104000

                                                                          
Query: 231    gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 290
              |||||||| || | ||| || ||||||||||| |||||||||||||||||||| || |||
Sbjct: 104001 gcctccttgagtagctctgcaagcctccgcttttcgtcatcgacgtctgggttagctgtg 104060

                                                                         
Query: 291    cctagcttctcttcacgcatttctacgacgtattccaagatctcaatggcctcatccag 349
              || ||||||||||| |||||  | || || | |||||||||||||||||||||||||||
Sbjct: 104061 cccagcttctcttcgcgcatcccaactacatgttccaagatctcaatggcctcatccag 104119
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>dbj|AP006694.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT45A22, TM0400a,
             complete sequence
          Length = 94961

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                         
Query: 261   ttctcgtcatcgacgtctgggttcgccgtgcctagcttctcttcacgcatttctacgacg 320
             ||||||||||| || || |||||||| || || ||||||||||| | |||| | || || 
Sbjct: 82258 ttctcgtcatccacatcggggttcgctgttccgagcttctcttctctcattccaaccaca 82317

                                         
Query: 321   tattccaagatctcaatggcctcatcca 348
              ||||||| ||||||||||| |||||||
Sbjct: 82318 aattccaaaatctcaatggcatcatcca 82345



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 351   cttcccattgcatcataagttccagcaagattgct 385
             ||||||||||||||||| ||||| || ||||||||
Sbjct: 82520 cttcccattgcatcataggttcctgctagattgct 82554
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>ref|XM_463817.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2162

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 231  gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 290
            ||||||||||| | ||| || |||||  |||||||||| ||||| || ||||| || |||
Sbjct: 1735 gcctccttcagaagctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtg 1676

                          
Query: 291  cctagcttctcttc 304
            || |||||||||||
Sbjct: 1675 ccgagcttctcttc 1662
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>dbj|AB110187.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, partial cds, clone: 15FPR003
          Length = 1219

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 231 gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 290
           ||||||||||| | ||| || |||||  |||||||||| ||||| || ||||| || |||
Sbjct: 817 gcctccttcagaagctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtg 758

                         
Query: 291 cctagcttctcttc 304
           || |||||||||||
Sbjct: 757 ccgagcttctcttc 744
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>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0501G04
          Length = 156603

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                         
Query: 231   gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 290
             ||||||||||| | ||| || |||||  |||||||||| ||||| || ||||| || |||
Sbjct: 13443 gcctccttcagaagctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtg 13502

                           
Query: 291   cctagcttctcttc 304
             || |||||||||||
Sbjct: 13503 ccgagcttctcttc 13516
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>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0017C12
          Length = 135356

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                          
Query: 231    gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 290
              ||||||||||| | ||| || |||||  |||||||||| ||||| || ||||| || |||
Sbjct: 131631 gcctccttcagaagctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtg 131690

                            
Query: 291    cctagcttctcttc 304
              || |||||||||||
Sbjct: 131691 ccgagcttctcttc 131704
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>dbj|AK069014.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170A02, full
            insert sequence
          Length = 2162

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 231  gcctccttcagcaactcggcgagcctccgcttctcgtcatcgacgtctgggttcgccgtg 290
            ||||||||||| | ||| || |||||  |||||||||| ||||| || ||||| || |||
Sbjct: 1734 gcctccttcagaagctccgcaagccttagcttctcgtcctcgacatccgggtttgctgtg 1675

                          
Query: 291  cctagcttctcttc 304
            || |||||||||||
Sbjct: 1674 ccgagcttctcttc 1661
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>gb|BT012689.1| Lycopersicon esculentum clone 113539R, mRNA sequence
          Length = 2031

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 330  atctcaatggcctcatccagtcttcccattgcatcataagttccagcaagattgct 385
            |||||||| || ||||||| |||||| || |||||||||||  | |||||||||||
Sbjct: 1578 atctcaatagcatcatccactcttcctatagcatcataagtggcggcaagattgct 1523
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>gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete sequence
          Length = 142659

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 469   catttatggagtatctttgaa 489
             |||||||||||||||||||||
Sbjct: 69255 catttatggagtatctttgaa 69275
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>gb|AC092354.2| Homo sapiens chromosome 5 clone RP11-307L14, complete sequence
          Length = 123581

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 144   gcaactgtagtcctctttcca 164
             |||||||||||||||||||||
Sbjct: 48280 gcaactgtagtcctctttcca 48300
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>dbj|AP002456.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-956A8, complete
             sequence
          Length = 114109

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 192   ttttccagggattttgccttcctgc 216
             ||||||||||||||| |||||||||
Sbjct: 85052 ttttccagggattttcccttcctgc 85076
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>dbj|AP001929.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-640N11, complete
             sequence
          Length = 161547

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 192   ttttccagggattttgccttcctgc 216
             ||||||||||||||| |||||||||
Sbjct: 21883 ttttccagggattttcccttcctgc 21907
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>gb|AY150042.1| Lycopersicon esculentum kinesin light chain I2I isoform mRNA,
           partial cds
          Length = 502

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 330 atctcaatggcctcatccagtcttcccattgcatcataagt 370
           |||||||| || ||||||| |||||| || |||||||||||
Sbjct: 50  atctcaatagcatcatccactcttcctatagcatcataagt 10
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>gb|AF104455.1| Homo sapiens chromosome 7qtelo BAC F6, complete sequence
          Length = 71353

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aataaaccaattgatacaca 82
            ||||||||||||||||||||
Sbjct: 6704 aataaaccaattgatacaca 6723
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>gb|U63834.1|HSU63834 Human KIT protein and alternatively spliced KIT protein (KIT) gene,
             complete cds
          Length = 89603

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    caaatttgaataaaccaatt 74
             ||||||||||||||||||||
Sbjct: 23776 caaatttgaataaaccaatt 23795
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>ref|XM_741487.1| Aspergillus fumigatus Af293 cysteine synthase B (Afu4g03930) partial
            mRNA
          Length = 1581

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 299  ctcttcacgcatttctacga 318
            ||||||||||||||||||||
Sbjct: 1081 ctcttcacgcatttctacga 1100
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>gb|AC122242.2| Mus musculus BAC clone RP23-147P2 from chromosome 13, complete sequence
          Length = 208096

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     tatcaccaaatttgaataaa 68
              ||||||||||||||||||||
Sbjct: 204080 tatcaccaaatttgaataaa 204061
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>emb|AL359977.16| Human DNA sequence from clone RP11-116M11 on chromosome 1 Contains the
             5' end of the FAF1 gene for Fas (TNFRSF6) associated
             factor 1, the 5' end of the CDKN2C gene for
             cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
             and a CpG island, complete sequence
          Length = 75013

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   aagattttccagggattttg 207
             ||||||||||||||||||||
Sbjct: 60609 aagattttccagggattttg 60590
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>emb|AL354978.20| Human DNA sequence from clone RP11-266I14 on chromosome 1 Contains the
             3' end of a novel gene (DKFZp761D221), a novel gene
             (FLJ40873) a novel gene, the INSL5 gene for insulin-like 5
             and the 3' end of a novel gene (FLJ23129), complete
             sequence
          Length = 98450

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 342   tcatccagtcttcccattgcatca 365
             |||||||||||||||||| |||||
Sbjct: 78248 tcatccagtcttcccattacatca 78271
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>emb|AJ704460.1| Asclepias curassavica chloroplast partial trnT-L intergenic spacer
          Length = 793

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 101 gttcccttttctctttcatt 120
           ||||||||||||||||||||
Sbjct: 768 gttcccttttctctttcatt 749
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>gb|AC160145.6| Mus musculus 10 BAC RP24-160D12 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 155235

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 202   attttgccttcctgcttctccccc 225
             ||||||||||||| ||||||||||
Sbjct: 29596 attttgccttcctccttctccccc 29573
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>gb|AY623764.1| Rattus norvegicus Defa12-ps pseudogene, complete sequence
          Length = 4085

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 454  agagttctgcagcttcattt 473
            ||||||||||||||||||||
Sbjct: 3988 agagttctgcagcttcattt 3969
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>gb|AY623759.1| Rattus norvegicus defensin alpha 7 (Defa7) gene, complete cds
          Length = 4023

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 454  agagttctgcagcttcattt 473
            ||||||||||||||||||||
Sbjct: 3937 agagttctgcagcttcattt 3918
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>ref|XM_685440.1| PREDICTED: Danio rerio similar to Microtubule-actin crosslinking
            factor 1 (Actin cross-linking family 7) (LOC562044), mRNA
          Length = 9790

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 336  atggcctcatccagtcttcccatt 359
            |||||||||||||||||| |||||
Sbjct: 5420 atggcctcatccagtctttccatt 5397
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>gb|AC132139.4| Mus musculus BAC clone RP23-181A24 from chromosome 10, complete
             sequence
          Length = 206712

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 202   attttgccttcctgcttctccccc 225
             ||||||||||||| ||||||||||
Sbjct: 15742 attttgccttcctccttctccccc 15765
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>gb|AC158356.2| Mus musculus BAC clone RP23-475P8 from chromosome 13, complete sequence
          Length = 210995

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     tatcaccaaatttgaataaa 68
              ||||||||||||||||||||
Sbjct: 202914 tatcaccaaatttgaataaa 202933
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>gb|AC148700.1| Macaca mulatta Major Histocompatibility Complex BAC MMU281E18, complete
             sequence
          Length = 188725

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    agtgttcccttttctctttc 117
             ||||||||||||||||||||
Sbjct: 42690 agtgttcccttttctctttc 42671
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>gb|AC122719.2| Homo sapiens chromosome 5 clone RP11-661C8, complete sequence
          Length = 164798

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    agtgttcccttttctctttc 117
             ||||||||||||||||||||
Sbjct: 93498 agtgttcccttttctctttc 93517
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     tcctgcttctcccccggcca 230
               ||||||||||||||||||||
Sbjct: 3088297 tcctgcttctcccccggcca 3088278
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>emb|BX511004.9| Zebrafish DNA sequence from clone RP71-45K5 in linkage group 19,
             complete sequence
          Length = 168626

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 336   atggcctcatccagtcttcccatt 359
             |||||||||||||||||| |||||
Sbjct: 88410 atggcctcatccagtctttccatt 88387
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>gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 map 4p16, complete sequence
          Length = 185393

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     caaatttgaataaaccaatt 74
              ||||||||||||||||||||
Sbjct: 161215 caaatttgaataaaccaatt 161234
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>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    ccaagatctcaatggcctca 344
              ||||||||||||||||||||
Sbjct: 874044 ccaagatctcaatggcctca 874063
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>emb|AL732449.5| Mouse DNA sequence from clone RP23-191F11 on chromosome X, complete
              sequence
          Length = 160779

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 96     atagtgttcccttttctctttcattcaa 123
              |||||||||||||||||| | |||||||
Sbjct: 158315 atagtgttcccttttctcatacattcaa 158342


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,272,858
Number of Sequences: 3902068
Number of extensions: 4272858
Number of successful extensions: 92558
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92427
Number of HSP's gapped (non-prelim): 126
length of query: 509
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 487
effective length of database: 17,147,199,772
effective search space: 8350686288964
effective search space used: 8350686288964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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