ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479194.1| Oryza sativa (japonica cultivar-group), mRNA 159 2e-35
2ref|XM_507395.1| PREDICTED Oryza sativa (japonica cultivar-group... 159 2e-35
3ref|XM_506483.2| PREDICTED Oryza sativa (japonica cultivar-group... 159 2e-35
4dbj|AK103285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 2e-35
5dbj|AK069142.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 2e-35
6dbj|AK058506.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 4e-33
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 107 5e-20
8dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 107 5e-20
9dbj|AK099133.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 7e-10
10dbj|AK059680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 7e-10
11gb|AE011943.1| Xanthomonas axonopodis pv. citri str. 306, secti... 44 0.63
12gb|AC104832.8| Mus Musculus Strain C57BL6/J Chromosome 12 BAC, R... 42 2.5
13gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genom... 40 9.8
14gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 40 9.8
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.8
16gb|AC127315.4| Mus musculus BAC clone RP23-218F21 from chromosom... 40 9.8
17gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, comple... 40 9.8
18gb|BC035516.1| Homo sapiens coiled-coil domain containing 71, mR... 40 9.8
19emb|AL807752.10| Human DNA sequence from clone RP11-229P13 on ch... 40 9.8
20dbj|AK094432.1| Homo sapiens cDNA FLJ37113 fis, clone BRACE2021708 40 9.8
21emb|CR610877.1| full-length cDNA clone CS0DI041YC15 of Placenta ... 40 9.8
22emb|CR608073.1| full-length cDNA clone CS0DL002YD03 of B cells (... 40 9.8
23emb|CR608045.1| full-length cDNA clone CS0DJ001YB01 of T cells (... 40 9.8
24dbj|AK022862.1| Homo sapiens cDNA FLJ12800 fis, clone NT2RP20020... 40 9.8
25ref|NM_022903.2| Homo sapiens coiled-coil domain containing 71 (... 40 9.8
26gb|AC155289.11| Mus musculus 6 BAC RP24-137B5 (Roswell Park Canc... 40 9.8
27gb|AC135506.3| Homo sapiens chromosome 3 clone RP11-694I15, comp... 40 9.8
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
29gb|AC115914.6| Mus musculus chromosome 8, clone RP24-487J5, comp... 40 9.8
30dbj|AK098658.1| Homo sapiens cDNA FLJ25792 fis, clone TST06958 40 9.8
31ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@)... 40 9.8
32emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromo... 40 9.8
33dbj|D87003.1| Homo sapiens immunoglobulin lambda gene locus DNA,... 40 9.8
34dbj|AP000897.6| Homo sapiens genomic DNA, chromosome 18, clone:R... 40 9.8 
>ref|XM_479194.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 812

 Score =  159 bits (80), Expect = 2e-35
 Identities = 188/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 271
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 491 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 432

                                                                       
Query: 272 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 331
           |||||||| ||| ||||||||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 431 caatcttcagccgccttgacctcagctgttgtcaagacaactgcttttgcttccttaaaa 372

                                                                       
Query: 332 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 391
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 371 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 312

                                                       
Query: 392 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 435
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 311 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 268
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>ref|XM_507395.1| PREDICTED Oryza sativa (japonica cultivar-group), P0524E08.111 mRNA
          Length = 877

 Score =  159 bits (80), Expect = 2e-35
 Identities = 188/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 271
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 569 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 510

                                                                       
Query: 272 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 331
           |||||||| ||| ||||||||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 509 caatcttcagccgccttgacctcagctgttgtcaagacaactgcttttgcttccttaaaa 450

                                                                       
Query: 332 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 391
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 449 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 390

                                                       
Query: 392 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 435
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 389 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 346
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>ref|XM_506483.2| PREDICTED Oryza sativa (japonica cultivar-group), P0524E08.111 mRNA
          Length = 1077

 Score =  159 bits (80), Expect = 2e-35
 Identities = 188/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 271
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 597 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 538

                                                                       
Query: 272 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 331
           |||||||| ||| ||||||||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 537 caatcttcagccgccttgacctcagctgttgtcaagacaactgcttttgcttccttaaaa 478

                                                                       
Query: 332 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 391
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 477 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 418

                                                       
Query: 392 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 435
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 417 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 374
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>dbj|AK103285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M20, full
           insert sequence
          Length = 812

 Score =  159 bits (80), Expect = 2e-35
 Identities = 188/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 271
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 491 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 432

                                                                       
Query: 272 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 331
           |||||||| ||| ||||||||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 431 caatcttcagccgccttgacctcagctgttgtcaagacaactgcttttgcttccttaaaa 372

                                                                       
Query: 332 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 391
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 371 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 312

                                                       
Query: 392 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 435
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 311 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 268
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>dbj|AK069142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008N22, full
           insert sequence
          Length = 1077

 Score =  159 bits (80), Expect = 2e-35
 Identities = 188/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 271
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 597 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 538

                                                                       
Query: 272 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 331
           |||||||| ||| ||||||||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 537 caatcttcagccgccttgacctcagctgttgtcaagacaactgcttttgcttccttaaaa 478

                                                                       
Query: 332 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 391
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 477 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 418

                                                       
Query: 392 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 435
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 417 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 374
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>dbj|AK058506.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G01, full
           insert sequence
          Length = 877

 Score =  151 bits (76), Expect = 4e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                       
Query: 212 cgagactcaaatccacaagtaccaagatgacttgcaagtttctctccacattgcttctgc 271
           ||||| ||||||||||| || || || ||| |||| |||||||||||||||||||| |||
Sbjct: 569 cgagattcaaatccacaggtgcccaggtgatttgccagtttctctccacattgcttttgc 510

                                                                       
Query: 272 caatcttctgccaccttgacctcaggagttgtccacacgacagcccttgcttccttataa 331
           |||||||| ||| ||||| ||||||  |||||| | || || ||  ||||||||||| ||
Sbjct: 509 caatcttcagccgccttggcctcagctgttgtcaagacaactgcttttgcttccttaaaa 450

                                                                       
Query: 332 tcaactgtagcagaagtaacctcgggctgactctcgagaatccgcttgacgctggcagcg 391
           ||||| || |||||||| || || || || ||||| | ||||||||| ||||| || |||
Sbjct: 449 tcaacggtggcagaagtgacttcaggttggctctccaaaatccgcttcacgctcgccgcg 390

                                                       
Query: 392 cacccgtcgcacatcatgccctgaacactgagcaagatggcctc 435
           ||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct: 389 cacccatcgcacatcatcccctggacgctgagcaggatggcctc 346
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  107 bits (54), Expect = 5e-20
 Identities = 126/150 (84%)
 Strand = Plus / Minus

                                                                            
Query: 199      tttaccttgtggacgagactcaaatccacaagtaccaagatgacttgcaagtttctctcc 258
                |||||||||  | ||||| ||||||||||| || || || ||| |||| |||||||||||
Sbjct: 25738194 tttaccttgaaggcgagattcaaatccacaggtgcccaggtgatttgccagtttctctcc 25738135

                                                                            
Query: 259      acattgcttctgccaatcttctgccaccttgacctcaggagttgtccacacgacagccct 318
                ||||||||| ||||||||||| ||| ||||||||||||  |||||| | || || ||  |
Sbjct: 25738134 acattgcttttgccaatcttcagccgccttgacctcagctgttgtcaagacaactgcttt 25738075

                                              
Query: 319      tgcttccttataatcaactgtagcagaagt 348
                |||||||||| ||||||| || ||||||||
Sbjct: 25738074 tgcttccttaaaatcaacggtggcagaagt 25738045



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                             
Query: 370      aatccgcttgacgctggcagcgcacccgtcgcacatcatgccctg 414
                ||||||||| ||||| || |||||||| ||||||||||| |||||
Sbjct: 25737317 aatccgcttcacgctcgccgcgcacccatcgcacatcatcccctg 25737273
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>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524E08
          Length = 154696

 Score =  107 bits (54), Expect = 5e-20
 Identities = 126/150 (84%)
 Strand = Plus / Minus

                                                                         
Query: 199   tttaccttgtggacgagactcaaatccacaagtaccaagatgacttgcaagtttctctcc 258
             |||||||||  | ||||| ||||||||||| || || || ||| |||| |||||||||||
Sbjct: 55356 tttaccttgaaggcgagattcaaatccacaggtgcccaggtgatttgccagtttctctcc 55297

                                                                         
Query: 259   acattgcttctgccaatcttctgccaccttgacctcaggagttgtccacacgacagccct 318
             ||||||||| ||||||||||| ||| ||||||||||||  |||||| | || || ||  |
Sbjct: 55296 acattgcttttgccaatcttcagccgccttgacctcagctgttgtcaagacaactgcttt 55237

                                           
Query: 319   tgcttccttataatcaactgtagcagaagt 348
             |||||||||| ||||||| || ||||||||
Sbjct: 55236 tgcttccttaaaatcaacggtggcagaagt 55207



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 370   aatccgcttgacgctggcagcgcacccgtcgcacatcatgccctg 414
             ||||||||| ||||| || |||||||| ||||||||||| |||||
Sbjct: 54479 aatccgcttcacgctcgccgcgcacccatcgcacatcatcccctg 54435
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>dbj|AK099133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049J05, full
           insert sequence
          Length = 922

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                       
Query: 293 tcaggagttgtccacacgacagcccttgcttccttataatcaactgtagcagaagtaacc 352
           ||||| |||||||||||| ||||| ||  || || | | || ||||| ||||||||||||
Sbjct: 507 tcaggtgttgtccacacggcagccgtttttttctcaaagtcgactgtggcagaagtaacc 448

                                                    
Query: 353 tcgggctgactctcgagaatccgcttgacgctggcagcgca 393
           || ||||| ||||||||||||||||| ||||| || |||||
Sbjct: 447 tcaggctggctctcgagaatccgcttcacgctcgcggcgca 407
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>dbj|AK059680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-H07, full
           insert sequence
          Length = 978

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                       
Query: 293 tcaggagttgtccacacgacagcccttgcttccttataatcaactgtagcagaagtaacc 352
           ||||| |||||||||||| ||||| ||  || || | | || ||||| ||||||||||||
Sbjct: 534 tcaggtgttgtccacacggcagccgtttttttctcaaagtcgactgtggcagaagtaacc 475

                                                    
Query: 353 tcgggctgactctcgagaatccgcttgacgctggcagcgca 393
           || ||||| ||||||||||||||||| ||||| || |||||
Sbjct: 474 tcaggctggctctcgagaatccgcttcacgctcgcggcgca 434
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>gb|AE011943.1| Xanthomonas axonopodis pv. citri str. 306,  section 321 of 469 of the
            complete genome
          Length = 10029

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 464  gccgccgctgcggcggtgaccg 485
            ||||||||||||||||||||||
Sbjct: 8815 gccgccgctgcggcggtgaccg 8836
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>gb|AC104832.8| Mus Musculus Strain C57BL6/J Chromosome 12 BAC, RP23-38P6, complete
              sequence
          Length = 179216

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 51     ccaaatgtttacatgagatgt 71
              |||||||||||||||||||||
Sbjct: 151866 ccaaatgtttacatgagatgt 151846
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>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete
             sequence
          Length = 137709

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 362   ctctcgagaatccgcttgacgctggcagcgca 393
             ||||||||||||||||| ||||| || |||||
Sbjct: 17561 ctctcgagaatccgcttcacgctcgcggcgca 17530
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 466     cgccgctgcggcggtgaccg 485
               ||||||||||||||||||||
Sbjct: 1618368 cgccgctgcggcggtgaccg 1618349
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 362      ctctcgagaatccgcttgacgctggcagcgca 393
                ||||||||||||||||| ||||| || |||||
Sbjct: 15319787 ctctcgagaatccgcttcacgctcgcggcgca 15319818
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>gb|AC127315.4| Mus musculus BAC clone RP23-218F21 from chromosome 8, complete sequence
          Length = 207577

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    gttgtccacacgacagccct 318
              ||||||||||||||||||||
Sbjct: 112594 gttgtccacacgacagccct 112575
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>gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, complete sequence
          Length = 183991

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 658    ctctgatttctccttctccc 677
              ||||||||||||||||||||
Sbjct: 153623 ctctgatttctccttctccc 153604
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>gb|BC035516.1| Homo sapiens coiled-coil domain containing 71, mRNA (cDNA clone
           MGC:34190 IMAGE:5229681), complete cds
          Length = 1820

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 495 cgccgccgcggggacgcaagacgc 518
           ||||||||||||||| ||||||||
Sbjct: 52  cgccgccgcggggacccaagacgc 29
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>emb|AL807752.10| Human DNA sequence from clone RP11-229P13 on chromosome 9 Contains a
             ribosomal protein L30 (RPL30) pseudogene, the gene for the
             possible ortholog of mouse f-box and WD-40 domain protein
             5 (FBXW5), the C8G gene for complement 8 (gamma
             polypeptide), a novel gene for the possible ortholog to
             RIKEN mouse CDNA 9230102M18 (9230192M18Rik), five novel
             genes,  the PTGDS gene for prostaglandin D2 synthase 21kDa
             (brain), the CLIC3 gene for chloride intracellular channel
             3, the ABCA2 gene for ATP-binding cassette (sub-family A
             (ABC1), member 2), the FUT7 gene for fucosyltransferase 7
             (alpha (1,3) fucosyltransferase), the NPDC1 gene for
             neural proliferation, differentiation and control 1,  the
             ENTPD2 gene for ectonucleoside triphosphate
             diphosphohydrolase 2, a novel gene for the possible
             ortholog of RIKEN mouse cDNA 2010317E24 (2010317E25Rik), a
             novel gene (LOC91373), the 5' end of the MAN1B1 gene for
             mannosidase (alpha, class 1B, member 1), five novel genes
             and seventeen CpG islands, complete sequence
          Length = 158699

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 656   tgctctgatttctccttctc 675
             ||||||||||||||||||||
Sbjct: 56431 tgctctgatttctccttctc 56450
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>dbj|AK094432.1| Homo sapiens cDNA FLJ37113 fis, clone BRACE2021708
          Length = 2596

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 532  ggaagagaaggaaacggagg 551
            ||||||||||||||||||||
Sbjct: 1681 ggaagagaaggaaacggagg 1700
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>emb|CR610877.1| full-length cDNA clone CS0DI041YC15 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1743

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 495 cgccgccgcggggacgcaagacgc 518
           ||||||||||||||| ||||||||
Sbjct: 43  cgccgccgcggggacccaagacgc 20
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>emb|CR608073.1| full-length cDNA clone CS0DL002YD03 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1761

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 495 cgccgccgcggggacgcaagacgc 518
           ||||||||||||||| ||||||||
Sbjct: 61  cgccgccgcggggacccaagacgc 38
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>emb|CR608045.1| full-length cDNA clone CS0DJ001YB01 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1718

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 495 cgccgccgcggggacgcaagacgc 518
           ||||||||||||||| ||||||||
Sbjct: 33  cgccgccgcggggacccaagacgc 10
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>dbj|AK022862.1| Homo sapiens cDNA FLJ12800 fis, clone NT2RP2002079, weakly similar
           to HISTONE H1, GONADAL
          Length = 1782

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 495 cgccgccgcggggacgcaagacgc 518
           ||||||||||||||| ||||||||
Sbjct: 54  cgccgccgcggggacccaagacgc 31
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>ref|NM_022903.2| Homo sapiens coiled-coil domain containing 71 (CCDC71), mRNA
          Length = 1820

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 495 cgccgccgcggggacgcaagacgc 518
           ||||||||||||||| ||||||||
Sbjct: 52  cgccgccgcggggacccaagacgc 29
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>gb|AC155289.11| Mus musculus 6 BAC RP24-137B5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 133835

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   tctctccacattgcttctgc 271
             ||||||||||||||||||||
Sbjct: 81318 tctctccacattgcttctgc 81299
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>gb|AC135506.3| Homo sapiens chromosome 3 clone RP11-694I15, complete sequence
          Length = 174363

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 495   cgccgccgcggggacgcaagacgc 518
             ||||||||||||||| ||||||||
Sbjct: 96571 cgccgccgcggggacccaagacgc 96594
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 362      ctctcgagaatccgcttgacgctggcagcgca 393
                ||||||||||||||||| ||||| || |||||
Sbjct: 15314321 ctctcgagaatccgcttcacgctcgcggcgca 15314352
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>gb|AC115914.6| Mus musculus chromosome 8, clone RP24-487J5, complete sequence
          Length = 163170

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    gttgtccacacgacagccct 318
              ||||||||||||||||||||
Sbjct: 152029 gttgtccacacgacagccct 152010
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>dbj|AK098658.1| Homo sapiens cDNA FLJ25792 fis, clone TST06958
          Length = 1657

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 495 cgccgccgcggggacgcaagacgc 518
           ||||||||||||||| ||||||||
Sbjct: 78  cgccgccgcggggacccaagacgc 55
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>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22
          Length = 909203

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 532    ggaagagaaggaaacggagg 551
              ||||||||||||||||||||
Sbjct: 244018 ggaagagaaggaaacggagg 243999
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>emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromosome 2, complete sequence
          Length = 167364

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    ctcaagcaatttatttacct 205
              ||||||||||||||||||||
Sbjct: 125908 ctcaagcaatttatttacct 125889
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>dbj|D87003.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:2H8
          Length = 43742

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  ggaagagaaggaaacggagg 551
            ||||||||||||||||||||
Sbjct: 4385 ggaagagaaggaaacggagg 4366
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>dbj|AP000897.6| Homo sapiens genomic DNA, chromosome 18, clone:RP11-678G15, complete
             sequence
          Length = 187987

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   actcaaatccacaagtacca 235
             ||||||||||||||||||||
Sbjct: 84894 actcaaatccacaagtacca 84875


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,215,999
Number of Sequences: 3902068
Number of extensions: 5215999
Number of successful extensions: 101298
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101128
Number of HSP's gapped (non-prelim): 165
length of query: 718
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 695
effective length of database: 17,143,297,704
effective search space: 11914591904280
effective search space used: 11914591904280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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