>emb|BX088573.4| Mouse DNA sequence from clone RP23-78N10 on chromosome 4 Contains the 3'
              end of the Dbccr1 gene for deleted in bladder cancer
              chromosome region candidate 1 (human), complete sequence
          Length = 203865

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 256    cctgtcctctacttcttttgggt 278
              |||||||||||||||||||||||
Sbjct: 175132 cctgtcctctacttcttttgggt 175154

>emb|X13595.1|PVGRP10 Bean DNA for glycine-rich cell wall protein GRP 1.0
          Length = 1812

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 57   ttcctctacacataaagatttaa 79
            |||||||||||||||||||||||
Sbjct: 1807 ttcctctacacataaagatttaa 1785

>gb|AC170422.1| Rhesus Macaque  BAC CH250-106F22 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 185455

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     tatatgtttatttagtagcac 25
             |||||||||||||||||||||
Sbjct: 79214 tatatgtttatttagtagcac 79234

>gb|AC100893.13| Mus musculus chromosome 8, clone RP23-68I8, complete sequence
          Length = 253420

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 343    gaagaaaatgtagtgttgtgg 363
              |||||||||||||||||||||
Sbjct: 124945 gaagaaaatgtagtgttgtgg 124925

>gb|AC098890.3| Mus musculus BAC clone RP23-122P22 from X, complete sequence
          Length = 202740

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 545   aaagaaagcagaaccgtgtac 565
             |||||||||||||||||||||
Sbjct: 61406 aaagaaagcagaaccgtgtac 61386

>gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete sequence
          Length = 113964

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    aacaaaatagttctacaagtg 116
             |||||||||||||||||||||
Sbjct: 74474 aacaaaatagttctacaagtg 74494

>emb|AJ418370.1|MTR418370 Medicago truncatula nork gene for nodulation receptor kinase, exons
            1-15, Allele: wild type; NN1
          Length = 8569

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aacaaaatagttctacaagtg 116
            |||||||||||||||||||||
Sbjct: 8296 aacaaaatagttctacaagtg 8276

>emb|AJ418369.1|MTR418369 Medicago truncatula mRNA for nodulation receptor kinase (nork gene),
            wild type allele
          Length = 3568

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 96   aacaaaatagttctacaagtg 116
            |||||||||||||||||||||
Sbjct: 3540 aacaaaatagttctacaagtg 3520

>emb|BX276185.11| Zebrafish DNA sequence from clone CH211-276M23, complete sequence
          Length = 157119

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 193    caagtttttattgatcacaca 213
              |||||||||||||||||||||
Sbjct: 132761 caagtttttattgatcacaca 132781

>emb|AL669958.14| Mouse DNA sequence from clone RP23-213K6 on chromosome X, complete
              sequence
          Length = 195411

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 545    aaagaaagcagaaccgtgtac 565
              |||||||||||||||||||||
Sbjct: 128332 aaagaaagcagaaccgtgtac 128312

>ref|NM_001036055.1| Arabidopsis thaliana unknown protein AT1G32928 mRNA, complete cds
          Length = 544

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 aacaaagattgaatgagaag 190
           ||||||||||||||||||||
Sbjct: 22  aacaaagattgaatgagaag 3

>gb|AC123609.11| Mus musculus chromosome 3, clone RP23-281B17, complete sequence
          Length = 223516

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 256    cctgtcctctacttcttttgggtg 279
              ||||||||||||| ||||||||||
Sbjct: 138512 cctgtcctctactccttttgggtg 138489

>gb|AC022775.16| Mus musculus chromosome 15, clone RP23-71O17, complete sequence
          Length = 223532

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    catagtttggatcttgattt 394
              ||||||||||||||||||||
Sbjct: 134252 catagtttggatcttgattt 134271

>gb|AC009462.7| Drosophila melanogaster clone BACR27G04, complete sequence
          Length = 151609

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 182   aatgagaagcacaagtttttattg 205
             ||||| ||||||||||||||||||
Sbjct: 18927 aatgaaaagcacaagtttttattg 18950

>gb|AC106017.11| Homo sapiens chromosome 17, clone RP11-744A16, complete sequence
          Length = 178625

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   agcttcttgttccctgctct 252
             ||||||||||||||||||||
Sbjct: 19953 agcttcttgttccctgctct 19972

>gb|AC020688.7| Homo sapiens chromosome 8, clone RP11-255B23, complete sequence
          Length = 198958

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aagcacaagtttttattgat 207
             ||||||||||||||||||||
Sbjct: 55396 aagcacaagtttttattgat 55415

>dbj|AK221776.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL21-70-N07
          Length = 550

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 171 aacaaagattgaatgagaag 190
           ||||||||||||||||||||
Sbjct: 23  aacaaagattgaatgagaag 4

>gb|AC022121.6| Homo sapiens chromosome 5 clone CTD-2007H13, complete sequence
          Length = 219258

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 261  cctctacttcttttgggtgcttcagatcatcc 292
            |||||||||| ||| ||||||||||| |||||
Sbjct: 7382 cctctacttcctttaggtgcttcagagcatcc 7413

>gb|AC008522.6| Homo sapiens chromosome 5 clone CTC-463N11, complete sequence
          Length = 164462

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 261    cctctacttcttttgggtgcttcagatcatcc 292
              |||||||||| ||| ||||||||||| |||||
Sbjct: 136451 cctctacttcctttaggtgcttcagagcatcc 136482

>gb|AC008362.5|AC008362 Drosophila melanogaster, chromosome 3R, region 90D-90E, BAC clone
              BACR01C15, complete sequence
          Length = 153048

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 182    aatgagaagcacaagtttttattg 205
              ||||| ||||||||||||||||||
Sbjct: 142712 aatgaaaagcacaagtttttattg 142735

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 450      gcctacaccacgatgtggac 469
                ||||||||||||||||||||
Sbjct: 20146930 gcctacaccacgatgtggac 20146949

>gb|AC007952.15| Homo sapiens chromosome 17, clone RP11-160E2, complete sequence
          Length = 158103

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    agcttcttgttccctgctct 252
              ||||||||||||||||||||
Sbjct: 110311 agcttcttgttccctgctct 110330



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   agcttcttgttccctgctct 252
             ||||||||||||||||||||
Sbjct: 24713 agcttcttgttccctgctct 24694

>gb|AC139083.2| Homo sapiens chromosome 17, clone XXfos-801024C2, complete sequence
          Length = 39891

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  agcttcttgttccctgctct 252
            ||||||||||||||||||||
Sbjct: 1844 agcttcttgttccctgctct 1863

>gb|AC139315.2| Homo sapiens chromosome 17, clone XXfos-800667B10, complete sequence
          Length = 39634

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   agcttcttgttccctgctct 252
             ||||||||||||||||||||
Sbjct: 23918 agcttcttgttccctgctct 23899

>gb|AC140106.1| Homo sapiens chromosome 17, clone XXfos-801239H9, complete sequence
          Length = 40948

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   agcttcttgttccctgctct 252
             ||||||||||||||||||||
Sbjct: 37236 agcttcttgttccctgctct 37255

>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0077M12
          Length = 145337

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   gcctacaccacgatgtggac 469
             ||||||||||||||||||||
Sbjct: 12716 gcctacaccacgatgtggac 12735

>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1188_F05
          Length = 117045

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   gcctacaccacgatgtggac 469
             ||||||||||||||||||||
Sbjct: 93476 gcctacaccacgatgtggac 93495

>gb|AC006424.5|AC006424 Arabidopsis thaliana chromosome I BAC F9L11 genomic sequence, complete
             sequence
          Length = 122836

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   aacaaagattgaatgagaag 190
             ||||||||||||||||||||
Sbjct: 50812 aacaaagattgaatgagaag 50793

>gb|AE003720.3| Drosophila melanogaster chromosome 3R, section 58 of 118 of the complete
              sequence
          Length = 228842

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 182    aatgagaagcacaagtttttattg 205
              ||||| ||||||||||||||||||
Sbjct: 188143 aatgaaaagcacaagtttttattg 188166

>emb|AJ009617.5|HSAJ9617 Homo sapiens chromosome 17 sequence from PAC RP1-149D14 and cosmid
             40M01, complete sequence
          Length = 153609

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   agcttcttgttccctgctct 252
             ||||||||||||||||||||
Sbjct: 27418 agcttcttgttccctgctct 27437


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,741,638
Number of Sequences: 3902068
Number of extensions: 5741638
Number of successful extensions: 98578
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98483
Number of HSP's gapped (non-prelim): 95
length of query: 595
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 572
effective length of database: 17,143,297,704
effective search space: 9805966286688
effective search space used: 9805966286688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)