ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20d19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_196818.1| Oryza sativa (japonica cultivar-group) putative... 387 e-104
2dbj|AK099882.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104
3dbj|AK066867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104
4gb|AY835457.1| Saccharum officinarum glutamine synthetase (GSI) ... 351 2e-93
5gb|AY109282.1| Zea mays PCO137630 mRNA sequence 331 2e-87
6gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 180 4e-42
7dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 180 4e-42
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 180 4e-42
9ref|NM_115178.4| Arabidopsis thaliana glutamate-ammonia ligase A... 72 3e-09
10gb|AY093331.1| Arabidopsis thaliana nodulin / glutamate-ammonia ... 72 3e-09
11gb|AY081607.1| Arabidopsis thaliana nodulin / glutamate-ammonia ... 72 3e-09
12gb|AY062801.1| Arabidopsis thaliana nodulin / glutamate-ammonia ... 72 3e-09
13gb|AY062678.1| Arabidopsis thaliana nodulin / glutamate-ammonia ... 72 3e-09
14emb|BX823285.1|CNS0A7UD Arabidopsis thaliana Full-length cDNA Co... 72 3e-09
15emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC... 60 1e-05
16emb|AJ238212.1|MTR238212 Medicago truncatula mRNA for glutamine ... 48 0.041
17gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
18gb|DQ059188.1| Neriacanthus purdieanus ribosomal protein S16 (rp... 42 2.5
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
20gb|AC074032.24| Homo sapiens 12 BAC RP4-605O3 (Roswell Park Canc... 42 2.5
21emb|BX000468.5| Zebrafish DNA sequence from clone DKEY-1J5 in li... 42 2.5
22emb|CR956368.6| M.truncatula DNA sequence from clone MTH2-64D19 ... 42 2.5
23ref|NM_189656.1| Oryza sativa (japonica cultivar-group), predic... 40 10.0
24gb|BC077527.1| Xenopus laevis MGC83232 protein, mRNA (cDNA clone... 40 10.0
25gb|BC077521.1| Xenopus laevis MGC83098 protein, mRNA (cDNA clone... 40 10.0
26gb|BC042872.1| Homo sapiens transmembrane protein 26, mRNA (cDNA... 40 10.0
27ref|XM_590478.2| PREDICTED: Bos taurus similar to RIKEN cDNA 643... 40 10.0
28gb|AC123052.4| Mus musculus chromosome 13 clone RP24-373D10, com... 40 10.0
29gb|AC116587.4| Mus musculus BAC clone RP23-409C18 from 12, compl... 40 10.0
30dbj|AK124367.1| Homo sapiens cDNA FLJ42376 fis, clone UTERU2035323 40 10.0
31gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, com... 40 10.0
32gb|AC156035.5| Mus musculus BAC clone RP23-302M20 from chromosom... 40 10.0
33gb|AC080166.6| Homo sapiens BAC clone RP11-813C7 from 2, complet... 40 10.0
34gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 10.0
35gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 10.0
36gb|AC132433.3| Mus musculus BAC clone RP23-214L14 from 13, compl... 40 10.0
37emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 10.0

>ref|NM_196818.1| Oryza sativa (japonica cultivar-group) putative glutamine synthetase
            (OSJNBa0018F16.4), mRNA
          Length = 2739

 Score =  387 bits (195), Expect = e-104
 Identities = 500/602 (83%), Gaps = 6/602 (0%)
 Strand = Plus / Minus

                                                                        
Query: 129  tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 188
            ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 2519 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 2460

                                                                        
Query: 189  gccttgcgtacagcgataacagctgtaataagcttattcccgattagctcatgcaaagtt 248
            ||||| |||||||| ||||| || || | ||| ||||  ||||| |  |||||||   ||
Sbjct: 2459 gcctttcgtacagcaataacggcagtgacaagtttatcgccgatcaattcatgcatgatt 2400

                                                                        
Query: 249  ttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagcttg 308
            ||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||||
Sbjct: 2399 ttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagcttg 2340

                                                                        
Query: 309  gta------gcataatctgcaggatttgattcaattggttcaggcaactcaaggccgttc 362
            |        |||||| ||||||| ||||||||| ||||||||||||||  |||||   ||
Sbjct: 2339 gagttggaggcataacctgcagggtttgattcagttggttcaggcaacgtaaggcttctc 2280

                                                                        
Query: 363  ctaagtccatcaatcccagcagcgacaatagcagcaagccccaagtgcggatttgcgcac 422
            || |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 2279 ctgagtccatcaatcccagcagcaactatagcagcaaggcccaagtgcgggtttgcgcac 2220

                                                                        
Query: 423  ccatcaaatgatttaatttcgaagttgctgaccatgtcgagaggcacaccaggtgggcat 482
             |||| || ||||||||||||||||||||||| |  || ||||| |  ||||||||||||
Sbjct: 2219 gcatcgaaggatttaatttcgaagttgctgacgagatcaagaggtatcccaggtgggcat 2160

                                                                        
Query: 483  gcggttctcaatggagcctcccggttttcttttccccagcataggtaagctccactccat 542
            || ||||||| ||||||||||| ||| || || ||||||||  | || || |||||||||
Sbjct: 2159 gcagttctcagtggagcctccctgttctccttcccccagcactgatatgcaccactccat 2100

                                                                        
Query: 543  gtatttggttgaattcgatcatagctgttagggtgaggagcagtaaatgccaagattgat 602
            || ||||| |||||||| |  |||||||| |||||||||||||| |||||||||||||||
Sbjct: 2099 gtgtttggctgaattcggttgtagctgtttgggtgaggagcagtgaatgccaagattgat 2040

                                                                        
Query: 603  ggaaggtgacggtatactccagcaaggaaccgttctccaacttttgacattccatagtgg 662
            ||||| ||  | ||||||||||||||||| | |||||| | | |||||||||||||||  
Sbjct: 2039 ggaagatggagatatactccagcaaggaagctttctccgattcttgacattccatagtaa 1980

                                                                        
Query: 663  ctatattcatttgatcccataaaaacattctgctcattctttcataaactcagatgcaca 722
             |||||||| |||||||||| || |||||||| ||    |  ||||||||||||||||||
Sbjct: 1979 ttatattcacttgatcccatgaacacattctgatcgaattcccataaactcagatgcaca 1920

              
Query: 723  tg 724
            ||
Sbjct: 1919 tg 1918



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>dbj|AK099882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111O16, full
            insert sequence
          Length = 3106

 Score =  387 bits (195), Expect = e-104
 Identities = 500/602 (83%), Gaps = 6/602 (0%)
 Strand = Plus / Minus

                                                                        
Query: 129  tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 188
            ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 2884 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 2825

                                                                        
Query: 189  gccttgcgtacagcgataacagctgtaataagcttattcccgattagctcatgcaaagtt 248
            ||||| |||||||| ||||| || || | ||| ||||  ||||| |  |||||||   ||
Sbjct: 2824 gcctttcgtacagcaataacggcagtgacaagtttatcgccgatcaattcatgcatgatt 2765

                                                                        
Query: 249  ttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagcttg 308
            ||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||||
Sbjct: 2764 ttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagcttg 2705

                                                                        
Query: 309  gta------gcataatctgcaggatttgattcaattggttcaggcaactcaaggccgttc 362
            |        |||||| ||||||| ||||||||| ||||||||||||||  |||||   ||
Sbjct: 2704 gagttggaggcataacctgcagggtttgattcagttggttcaggcaacgtaaggcttctc 2645

                                                                        
Query: 363  ctaagtccatcaatcccagcagcgacaatagcagcaagccccaagtgcggatttgcgcac 422
            || |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 2644 ctgagtccatcaatcccagcagcaactatagcagcaaggcccaagtgcgggtttgcgcac 2585

                                                                        
Query: 423  ccatcaaatgatttaatttcgaagttgctgaccatgtcgagaggcacaccaggtgggcat 482
             |||| || ||||||||||||||||||||||| |  || ||||| |  ||||||||||||
Sbjct: 2584 gcatcgaaggatttaatttcgaagttgctgacgagatcaagaggtatcccaggtgggcat 2525

                                                                        
Query: 483  gcggttctcaatggagcctcccggttttcttttccccagcataggtaagctccactccat 542
            || ||||||| ||||||||||| ||| || || ||||||||  | || || |||||||||
Sbjct: 2524 gcagttctcagtggagcctccctgttctccttcccccagcactgatatgcaccactccat 2465

                                                                        
Query: 543  gtatttggttgaattcgatcatagctgttagggtgaggagcagtaaatgccaagattgat 602
            || ||||| |||||||| |  |||||||| |||||||||||||| |||||||||||||||
Sbjct: 2464 gtgtttggctgaattcggttgtagctgtttgggtgaggagcagtgaatgccaagattgat 2405

                                                                        
Query: 603  ggaaggtgacggtatactccagcaaggaaccgttctccaacttttgacattccatagtgg 662
            ||||| ||  | ||||||||||||||||| | |||||| | | |||||||||||||||  
Sbjct: 2404 ggaagatggagatatactccagcaaggaagctttctccgattcttgacattccatagtaa 2345

                                                                        
Query: 663  ctatattcatttgatcccataaaaacattctgctcattctttcataaactcagatgcaca 722
             |||||||| |||||||||| || |||||||| ||    |  ||||||||||||||||||
Sbjct: 2344 ttatattcacttgatcccatgaacacattctgatcgaattcccataaactcagatgcaca 2285

              
Query: 723  tg 724
            ||
Sbjct: 2284 tg 2283



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>dbj|AK066867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075P13, full
            insert sequence
          Length = 2900

 Score =  387 bits (195), Expect = e-104
 Identities = 500/602 (83%), Gaps = 6/602 (0%)
 Strand = Plus / Minus

                                                                        
Query: 129  tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 188
            ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 2678 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 2619

                                                                        
Query: 189  gccttgcgtacagcgataacagctgtaataagcttattcccgattagctcatgcaaagtt 248
            ||||| |||||||| ||||| || || | ||| ||||  ||||| |  |||||||   ||
Sbjct: 2618 gcctttcgtacagcaataacggcagtgacaagtttatcgccgatcaattcatgcatgatt 2559

                                                                        
Query: 249  ttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagcttg 308
            ||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||||
Sbjct: 2558 ttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagcttg 2499

                                                                        
Query: 309  gta------gcataatctgcaggatttgattcaattggttcaggcaactcaaggccgttc 362
            |        |||||| ||||||| ||||||||| ||||||||||||||  |||||   ||
Sbjct: 2498 gagttggaggcataacctgcagggtttgattcagttggttcaggcaacgtaaggcttctc 2439

                                                                        
Query: 363  ctaagtccatcaatcccagcagcgacaatagcagcaagccccaagtgcggatttgcgcac 422
            || |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 2438 ctgagtccatcaatcccagcagcaactatagcagcaaggcccaagtgcgggtttgcgcac 2379

                                                                        
Query: 423  ccatcaaatgatttaatttcgaagttgctgaccatgtcgagaggcacaccaggtgggcat 482
             |||| || ||||||||||||||||||||||| |  || ||||| |  ||||||||||||
Sbjct: 2378 gcatcgaaggatttaatttcgaagttgctgacgagatcaagaggtatcccaggtgggcat 2319

                                                                        
Query: 483  gcggttctcaatggagcctcccggttttcttttccccagcataggtaagctccactccat 542
            || ||||||| ||||||||||| ||| || || ||||||||  | || || |||||||||
Sbjct: 2318 gcagttctcagtggagcctccctgttctccttcccccagcactgatatgcaccactccat 2259

                                                                        
Query: 543  gtatttggttgaattcgatcatagctgttagggtgaggagcagtaaatgccaagattgat 602
            || ||||| |||||||| |  |||||||| |||||||||||||| |||||||||||||||
Sbjct: 2258 gtgtttggctgaattcggttgtagctgtttgggtgaggagcagtgaatgccaagattgat 2199

                                                                        
Query: 603  ggaaggtgacggtatactccagcaaggaaccgttctccaacttttgacattccatagtgg 662
            ||||| ||  | ||||||||||||||||| | |||||| | | |||||||||||||||  
Sbjct: 2198 ggaagatggagatatactccagcaaggaagctttctccgattcttgacattccatagtaa 2139

                                                                        
Query: 663  ctatattcatttgatcccataaaaacattctgctcattctttcataaactcagatgcaca 722
             |||||||| |||||||||| || |||||||| ||    |  ||||||||||||||||||
Sbjct: 2138 ttatattcacttgatcccatgaacacattctgatcgaattcccataaactcagatgcaca 2079

              
Query: 723  tg 724
            ||
Sbjct: 2078 tg 2077



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>gb|AY835457.1| Saccharum officinarum glutamine synthetase (GSI) mRNA, partial cds
          Length = 2038

 Score =  351 bits (177), Expect = 2e-93
 Identities = 462/557 (82%)
 Strand = Plus / Minus

                                                                        
Query: 165  ttcttcgagtaatgatcaatctccgccttgcgtacagcgataacagctgtaataagctta 224
            ||||||||| ||||||| ||||| ||||| |||| ||| ||  ||||||| | ||| |||
Sbjct: 1737 ttcttcgagaaatgatcgatctcagccttccgtatagctatcgcagctgtgacaagttta 1678

                                                                        
Query: 225  ttcccgattagctcatgcaaagttttgtctgcagcaagtgattctacagattccagcaag 284
            |  || ||||  |||||||||   || ||||||| ||||| ||||||||||||| ||| |
Sbjct: 1677 tcaccaattaattcatgcaaaaccttatctgcagaaagtgcttctacagattcctgcagg 1618

                                                                        
Query: 285  tcctgcggtagccttttgagcttggtagcataatctgcaggatttgattcaattggttca 344
            | |||||||||||| || || |||| ||| | ||| | ||| ||||||||||||||||||
Sbjct: 1617 ttctgcggtagcctcttcagtttggaagcgtgatcagaagggtttgattcaattggttca 1558

                                                                        
Query: 345  ggcaactcaaggccgttcctaagtccatcaatcccagcagcgacaatagcagcaagcccc 404
            ||||||| |||| |  | || || ||||| || || ||||| || ||||||||||| |||
Sbjct: 1557 ggcaacttaaggtctcttcttagcccatcgatgccggcagcaacgatagcagcaagaccc 1498

                                                                        
Query: 405  aagtgcggatttgcgcacccatcaaatgatttaatttcgaagttgctgaccatgtcgaga 464
            ||||||||||||||||| ||||| || ||||| || |||||||||||||| |  || |||
Sbjct: 1497 aagtgcggatttgcgcagccatcgaaggatttgatctcgaagttgctgactaaatcaaga 1438

                                                                        
Query: 465  ggcacaccaggtgggcatgcggttctcaatggagcctcccggttttcttttccccagcat 524
            |||||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||
Sbjct: 1437 ggcacaccaggtgggcatgcggttcttaatggagcctccctgttctctttcccccagcat 1378

                                                                        
Query: 525  aggtaagctccactccatgtatttggttgaattcgatcatagctgttagggtgaggagca 584
             | |||||||||||||| |||| ||| ||||| || ||||||||||| ||||||||||| 
Sbjct: 1377 tgataagctccactccaagtatctggctgaatccggtcatagctgtttgggtgaggagcg 1318

                                                                        
Query: 585  gtaaatgccaagattgatggaaggtgacggtatactccagcaaggaaccgttctccaact 644
            ||||||||||| || |||||||| ||| | || ||||||||||||||| || |||||  |
Sbjct: 1317 gtaaatgccaatatggatggaagatgatgatacactccagcaaggaactgtgctccagtt 1258

                                                                        
Query: 645  tttgacattccatagtggctatattcatttgatcccataaaaacattctgctcattcttt 704
            |||||||||||||      ||| || | |||| ||||||||| ||||||| |||||||  
Sbjct: 1257 tttgacattccatgaaaattatctttacttgaccccataaaagcattctgatcattctcc 1198

                             
Query: 705  cataaactcagatgcac 721
            || || |||||||||||
Sbjct: 1197 cacaagctcagatgcac 1181



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>gb|AY109282.1| Zea mays PCO137630 mRNA sequence
          Length = 794

 Score =  331 bits (167), Expect = 2e-87
 Identities = 362/427 (84%)
 Strand = Plus / Minus

                                                                       
Query: 231 attagctcatgcaaagttttgtctgcagcaagtgattctacagattccagcaagtcctgc 290
           |||| ||||||||||   || ||||||| ||| ||||||||||||||| ||| || ||||
Sbjct: 447 attaactcatgcaaaaccttatctgcagaaagcgattctacagattcctgcaggttctgc 388

                                                                       
Query: 291 ggtagccttttgagcttggtagcataatctgcaggatttgattcaattggttcaggcaac 350
           ||||||||||| || || | ||  | ||| | ||| |||||||||||||| ||||| |||
Sbjct: 387 ggtagccttttcagttttgaagagtgatcagaagggtttgattcaattggctcaggtaac 328

                                                                       
Query: 351 tcaaggccgttcctaagtccatcaatcccagcagcgacaatagcagcaagccccaagtgc 410
           | ||||    | || || ||||| || |||||||| || ||||||||||| |||||||||
Sbjct: 327 ttaaggtgtcttcttagcccatcgatgccagcagctacgatagcagcaagacccaagtgc 268

                                                                       
Query: 411 ggatttgcgcacccatcaaatgatttaatttcgaagttgctgaccatgtcgagaggcaca 470
           ||||||||||| ||||| || ||||| || |||||||||||||| |  || |||||||||
Sbjct: 267 ggatttgcgcaaccatcgaaggatttgatctcgaagttgctgactaaatcaagaggcaca 208

                                                                       
Query: 471 ccaggtgggcatgcggttctcaatggagcctcccggttttcttttccccagcataggtaa 530
           |||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||| |||
Sbjct: 207 ccaggtgggcatgcggttcttaatggagcctccctgttctctttcccccagcatagataa 148

                                                                       
Query: 531 gctccactccatgtatttggttgaattcgatcatagctgttagggtgaggagcagtaaat 590
           ||||||||||| |||| ||| ||||| || || |||||||| ||||||||||| ||||||
Sbjct: 147 gctccactccaagtatctggctgaatccggtcgtagctgtttgggtgaggagcggtaaat 88

                                                                       
Query: 591 gccaagattgatggaaggtgacggtatactccagcaaggaaccgttctccaacttttgac 650
           ||||| ||||| ||||||||| | || ||||||||||||||| ||||||||  |||||||
Sbjct: 87  gccaatattgacggaaggtgatgatacactccagcaaggaactgttctccagtttttgac 28

                  
Query: 651 attccat 657
           |||||||
Sbjct: 27  attccat 21



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>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
             complete sequence
          Length = 179157

 Score =  180 bits (91), Expect = 4e-42
 Identities = 190/223 (85%)
 Strand = Plus / Minus

                                                                         
Query: 337   ttggttcaggcaactcaaggccgttcctaagtccatcaatcccagcagcgacaatagcag 396
             ||||||||||||||  |||||   |||| |||||||||||||||||||| || |||||||
Sbjct: 57435 ttggttcaggcaacgtaaggcttctcctgagtccatcaatcccagcagcaactatagcag 57376

                                                                         
Query: 397   caagccccaagtgcggatttgcgcacccatcaaatgatttaatttcgaagttgctgacca 456
             |||| ||||||||||| ||||||||| |||| || ||||||||||||||||||||||| |
Sbjct: 57375 caaggcccaagtgcgggtttgcgcacgcatcgaaggatttaatttcgaagttgctgacga 57316

                                                                         
Query: 457   tgtcgagaggcacaccaggtgggcatgcggttctcaatggagcctcccggttttcttttc 516
               || ||||| |  |||||||||||||| ||||||| ||||||||||| ||| || || |
Sbjct: 57315 gatcaagaggtatcccaggtgggcatgcagttctcagtggagcctccctgttctccttcc 57256

                                                        
Query: 517   cccagcataggtaagctccactccatgtatttggttgaattcg 559
             |||||||  | || || ||||||||||| ||||| ||||||||
Sbjct: 57255 cccagcactgatatgcaccactccatgtgtttggctgaattcg 57213



 Score =  123 bits (62), Expect = 9e-25
 Identities = 134/158 (84%)
 Strand = Plus / Minus

                                                                         
Query: 567   ctgttagggtgaggagcagtaaatgccaagattgatggaaggtgacggtatactccagca 626
             ||||| |||||||||||||| |||||||||||||||||||| ||  | ||||||||||||
Sbjct: 56964 ctgtttgggtgaggagcagtgaatgccaagattgatggaagatggagatatactccagca 56905

                                                                         
Query: 627   aggaaccgttctccaacttttgacattccatagtggctatattcatttgatcccataaaa 686
             ||||| | |||||| | | |||||||||||||||   |||||||| |||||||||| || 
Sbjct: 56904 aggaagctttctccgattcttgacattccatagtaattatattcacttgatcccatgaac 56845

                                                   
Query: 687   acattctgctcattctttcataaactcagatgcacatg 724
             |||||||| ||    |  ||||||||||||||||||||
Sbjct: 56844 acattctgatcgaattcccataaactcagatgcacatg 56807



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                         
Query: 247   ttttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagct 306
             ||||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||
Sbjct: 57765 ttttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagct 57706

                
Query: 307   tgg 309
             |||
Sbjct: 57705 tgg 57703



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 129   tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 188
             ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 57992 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 57933

                 
Query: 189   gcct 192
             ||||
Sbjct: 57932 gcct 57929



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  180 bits (91), Expect = 4e-42
 Identities = 190/223 (85%)
 Strand = Plus / Minus

                                                                            
Query: 337      ttggttcaggcaactcaaggccgttcctaagtccatcaatcccagcagcgacaatagcag 396
                ||||||||||||||  |||||   |||| |||||||||||||||||||| || |||||||
Sbjct: 16178546 ttggttcaggcaacgtaaggcttctcctgagtccatcaatcccagcagcaactatagcag 16178487

                                                                            
Query: 397      caagccccaagtgcggatttgcgcacccatcaaatgatttaatttcgaagttgctgacca 456
                |||| ||||||||||| ||||||||| |||| || ||||||||||||||||||||||| |
Sbjct: 16178486 caaggcccaagtgcgggtttgcgcacgcatcgaaggatttaatttcgaagttgctgacga 16178427

                                                                            
Query: 457      tgtcgagaggcacaccaggtgggcatgcggttctcaatggagcctcccggttttcttttc 516
                  || ||||| |  |||||||||||||| ||||||| ||||||||||| ||| || || |
Sbjct: 16178426 gatcaagaggtatcccaggtgggcatgcagttctcagtggagcctccctgttctccttcc 16178367

                                                           
Query: 517      cccagcataggtaagctccactccatgtatttggttgaattcg 559
                |||||||  | || || ||||||||||| ||||| ||||||||
Sbjct: 16178366 cccagcactgatatgcaccactccatgtgtttggctgaattcg 16178324



 Score =  123 bits (62), Expect = 9e-25
 Identities = 134/158 (84%)
 Strand = Plus / Minus

                                                                            
Query: 567      ctgttagggtgaggagcagtaaatgccaagattgatggaaggtgacggtatactccagca 626
                ||||| |||||||||||||| |||||||||||||||||||| ||  | ||||||||||||
Sbjct: 16178075 ctgtttgggtgaggagcagtgaatgccaagattgatggaagatggagatatactccagca 16178016

                                                                            
Query: 627      aggaaccgttctccaacttttgacattccatagtggctatattcatttgatcccataaaa 686
                ||||| | |||||| | | |||||||||||||||   |||||||| |||||||||| || 
Sbjct: 16178015 aggaagctttctccgattcttgacattccatagtaattatattcacttgatcccatgaac 16177956

                                                      
Query: 687      acattctgctcattctttcataaactcagatgcacatg 724
                |||||||| ||    |  ||||||||||||||||||||
Sbjct: 16177955 acattctgatcgaattcccataaactcagatgcacatg 16177918



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                            
Query: 247      ttttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagct 306
                ||||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||
Sbjct: 16178876 ttttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagct 16178817

                   
Query: 307      tgg 309
                |||
Sbjct: 16178816 tgg 16178814



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 129      tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 188
                ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 16179103 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 16179044

                    
Query: 189      gcct 192
                ||||
Sbjct: 16179043 gcct 16179040



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  180 bits (91), Expect = 4e-42
 Identities = 190/223 (85%)
 Strand = Plus / Minus

                                                                            
Query: 337      ttggttcaggcaactcaaggccgttcctaagtccatcaatcccagcagcgacaatagcag 396
                ||||||||||||||  |||||   |||| |||||||||||||||||||| || |||||||
Sbjct: 16186787 ttggttcaggcaacgtaaggcttctcctgagtccatcaatcccagcagcaactatagcag 16186728

                                                                            
Query: 397      caagccccaagtgcggatttgcgcacccatcaaatgatttaatttcgaagttgctgacca 456
                |||| ||||||||||| ||||||||| |||| || ||||||||||||||||||||||| |
Sbjct: 16186727 caaggcccaagtgcgggtttgcgcacgcatcgaaggatttaatttcgaagttgctgacga 16186668

                                                                            
Query: 457      tgtcgagaggcacaccaggtgggcatgcggttctcaatggagcctcccggttttcttttc 516
                  || ||||| |  |||||||||||||| ||||||| ||||||||||| ||| || || |
Sbjct: 16186667 gatcaagaggtatcccaggtgggcatgcagttctcagtggagcctccctgttctccttcc 16186608

                                                           
Query: 517      cccagcataggtaagctccactccatgtatttggttgaattcg 559
                |||||||  | || || ||||||||||| ||||| ||||||||
Sbjct: 16186607 cccagcactgatatgcaccactccatgtgtttggctgaattcg 16186565



 Score =  123 bits (62), Expect = 9e-25
 Identities = 134/158 (84%)
 Strand = Plus / Minus

                                                                            
Query: 567      ctgttagggtgaggagcagtaaatgccaagattgatggaaggtgacggtatactccagca 626
                ||||| |||||||||||||| |||||||||||||||||||| ||  | ||||||||||||
Sbjct: 16186316 ctgtttgggtgaggagcagtgaatgccaagattgatggaagatggagatatactccagca 16186257

                                                                            
Query: 627      aggaaccgttctccaacttttgacattccatagtggctatattcatttgatcccataaaa 686
                ||||| | |||||| | | |||||||||||||||   |||||||| |||||||||| || 
Sbjct: 16186256 aggaagctttctccgattcttgacattccatagtaattatattcacttgatcccatgaac 16186197

                                                      
Query: 687      acattctgctcattctttcataaactcagatgcacatg 724
                |||||||| ||    |  ||||||||||||||||||||
Sbjct: 16186196 acattctgatcgaattcccataaactcagatgcacatg 16186159



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                            
Query: 247      ttttgtctgcagcaagtgattctacagattccagcaagtcctgcggtagccttttgagct 306
                ||||||||||||| |||| ||| |||||||||| |||||||| ||| | |||||||||||
Sbjct: 16187117 ttttgtctgcagctagtgcttcgacagattccatcaagtccttcggcatccttttgagct 16187058

                   
Query: 307      tgg 309
                |||
Sbjct: 16187057 tgg 16187055



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 129      tagtaacggtgaatgagatcgccaaatgccccagggttcttcgagtaatgatcaatctcc 188
                ||||||||||||||||||||| | |||||  |||||||||||  ||| ||||| ||||| 
Sbjct: 16187344 tagtaacggtgaatgagatcggcgaatgctgcagggttcttctcgtagtgatcgatctca 16187285

                    
Query: 189      gcct 192
                ||||
Sbjct: 16187284 gcct 16187281



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>ref|NM_115178.4| Arabidopsis thaliana glutamate-ammonia ligase AT3G53180 mRNA,
            complete cds
          Length = 2939

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 504  cggttttcttttccccagcataggtaagctccactccatgtatttggttgaattcgatca 563
            ||||||||||| ||||| ||| || | ||||||||||||||||| ||||| ||||| || 
Sbjct: 2336 cggttttctttgccccaacattggaatgctccactccatgtattaggttggattcggtcg 2277

                                                        
Query: 564  tagctgttagggtgaggagcagtaaatgccaagattgatggaag 607
            |||||||| ||| | |||||  |||  || ||||||||||||||
Sbjct: 2276 tagctgtttgggagtggagctataatagctaagattgatggaag 2233



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>gb|AY093331.1| Arabidopsis thaliana nodulin / glutamate-ammonia ligase-like protein
            (At3g53180) mRNA, complete cds
          Length = 1594

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 504  cggttttcttttccccagcataggtaagctccactccatgtatttggttgaattcgatca 563
            ||||||||||| ||||| ||| || | ||||||||||||||||| ||||| ||||| || 
Sbjct: 1321 cggttttctttgccccaacattggaatgctccactccatgtattaggttggattcggtcg 1262

                                                        
Query: 564  tagctgttagggtgaggagcagtaaatgccaagattgatggaag 607
            |||||||| ||| | |||||  |||  || ||||||||||||||
Sbjct: 1261 tagctgtttgggagtggagctataatagctaagattgatggaag 1218



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>gb|AY081607.1| Arabidopsis thaliana nodulin / glutamate-ammonia ligase-like
           protein (At3g53180) mRNA, complete cds
          Length = 1263

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                       
Query: 504 cggttttcttttccccagcataggtaagctccactccatgtatttggttgaattcgatca 563
           ||||||||||| ||||| ||| || | ||||||||||||||||| ||||| ||||| || 
Sbjct: 809 cggttttctttgccccaacattggaatgctccactccatgtattaggttggattcggtcg 750

                                                       
Query: 564 tagctgttagggtgaggagcagtaaatgccaagattgatggaag 607
           |||||||| ||| | |||||  |||  || ||||||||||||||
Sbjct: 749 tagctgtttgggagtggagctataatagctaagattgatggaag 706



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>gb|AY062801.1| Arabidopsis thaliana nodulin / glutamate-ammonia ligase-like
           protein (At3g53180; T4D2.110) mRNA, complete cds
          Length = 1419

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                       
Query: 504 cggttttcttttccccagcataggtaagctccactccatgtatttggttgaattcgatca 563
           ||||||||||| ||||| ||| || | ||||||||||||||||| ||||| ||||| || 
Sbjct: 911 cggttttctttgccccaacattggaatgctccactccatgtattaggttggattcggtcg 852

                                                       
Query: 564 tagctgttagggtgaggagcagtaaatgccaagattgatggaag 607
           |||||||| ||| | |||||  |||  || ||||||||||||||
Sbjct: 851 tagctgtttgggagtggagctataatagctaagattgatggaag 808



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>gb|AY062678.1| Arabidopsis thaliana nodulin / glutamate-ammonia ligase-like protein
            (At3g53180; T4D2.110) mRNA, complete cds
          Length = 3033

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 504  cggttttcttttccccagcataggtaagctccactccatgtatttggttgaattcgatca 563
            ||||||||||| ||||| ||| || | ||||||||||||||||| ||||| ||||| || 
Sbjct: 2410 cggttttctttgccccaacattggaatgctccactccatgtattaggttggattcggtcg 2351

                                                        
Query: 564  tagctgttagggtgaggagcagtaaatgccaagattgatggaag 607
            |||||||| ||| | |||||  |||  || ||||||||||||||
Sbjct: 2350 tagctgtttgggagtggagctataatagctaagattgatggaag 2307



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>emb|BX823285.1|CNS0A7UD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS1ZD11 of Adult vegetative tissue of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2795

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                        
Query: 504  cggttttcttttccccagcataggtaagctccactccatgtatttggttgaattcgatca 563
            ||||||||||| ||||| ||| || | ||||||||||||||||| ||||| ||||| || 
Sbjct: 2308 cggttttctttgccccaacattggaatgctccactccatgtattaggttggattcggtcg 2249

                                                        
Query: 564  tagctgttagggtgaggagcagtaaatgccaagattgatggaag 607
            |||||||| ||| | |||||  |||  || ||||||||||||||
Sbjct: 2248 tagctgtttgggagtggagctataatagctaagattgatggaag 2205



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>emb|AL132958.1|ATT4D2 Arabidopsis thaliana DNA chromosome 3, BAC clone T4D2
          Length = 92611

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                         
Query: 504   cggttttcttttccccagcataggtaagctccactccatgtatttggttgaattcgatca 563
             ||||||||||| ||||| ||| || | ||||||||||||||||| ||||| ||||| || 
Sbjct: 34694 cggttttctttgccccaacattggaatgctccactccatgtattaggttggattcggtcg 34635

                   
Query: 564   tagctg 569
             ||||||
Sbjct: 34634 tagctg 34629



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>emb|AJ238212.1|MTR238212 Medicago truncatula mRNA for glutamine synthetase I
          Length = 1734

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 69/84 (82%)
 Strand = Plus / Minus

                                                                        
Query: 491  caatggagcctcccggttttcttttccccagcataggtaagctccactccatgtatttgg 550
            ||||||||||||||  ||||| ||||||||| | | ||| || ||||||||||| || ||
Sbjct: 1050 caatggagcctccctattttcatttccccagaacatgtatgcaccactccatgtgttcgg 991

                                    
Query: 551  ttgaattcgatcatagctgttagg 574
             || | ||||||||| ||| ||||
Sbjct: 990  ctgcaatcgatcataactgatagg 967



 Score = 44.1 bits (22), Expect = 0.64
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 164  gttcttcgagtaatgatcaatctccgcctt 193
            ||||||||||||||||||||| || |||||
Sbjct: 1371 gttcttcgagtaatgatcaatttcagcctt 1342



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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0079L11, complete sequence
          Length = 124104

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 696   tcattctttcataaactcaga 716
             |||||||||||||||||||||
Sbjct: 20349 tcattctttcataaactcaga 20329



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>gb|DQ059188.1| Neriacanthus purdieanus ribosomal protein S16 (rps16) gene, intron;
           chloroplast
          Length = 747

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 428 aaatgatttaatttcgaagtt 448
           |||||||||||||||||||||
Sbjct: 706 aaatgatttaatttcgaagtt 686



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 696     tcattctttcataaactcaga 716
               |||||||||||||||||||||
Sbjct: 1358687 tcattctttcataaactcaga 1358667



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>gb|AC074032.24| Homo sapiens 12 BAC RP4-605O3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 40346

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     ctttattattaactgaaaaac 26
             |||||||||||||||||||||
Sbjct: 18152 ctttattattaactgaaaaac 18132



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>emb|BX000468.5| Zebrafish DNA sequence from clone DKEY-1J5 in linkage group 20,
             complete sequence
          Length = 208583

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   gttcttcgagtaatgatcaat 184
             |||||||||||||||||||||
Sbjct: 41288 gttcttcgagtaatgatcaat 41268



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>emb|CR956368.6| M.truncatula DNA sequence from clone MTH2-64D19 on chromosome 3, complete
              sequence
          Length = 139040

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 164    gttcttcgagtaatgatcaat 184
              |||||||||||||||||||||
Sbjct: 115886 gttcttcgagtaatgatcaat 115866



 Score = 40.1 bits (20), Expect = 10.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 164   gttcttcgagtaatgatcaatctccgccttgc 195
             |||||||||||| |||||||| || |||||||
Sbjct: 49453 gttcttcgagtattgatcaatttcagccttgc 49484



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>ref|NM_189656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1800

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 315  taatctgcaggatttgattcaatt 338
            |||||||||||||||||| |||||
Sbjct: 1483 taatctgcaggatttgatgcaatt 1460



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>gb|BC077527.1| Xenopus laevis MGC83232 protein, mRNA (cDNA clone MGC:83232
            IMAGE:6635692), complete cds
          Length = 2151

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  ttttgagcttggtagcataa 317
            ||||||||||||||||||||
Sbjct: 1354 ttttgagcttggtagcataa 1373



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>gb|BC077521.1| Xenopus laevis MGC83098 protein, mRNA (cDNA clone MGC:83098
            IMAGE:6317431), complete cds
          Length = 2083

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  ttttgagcttggtagcataa 317
            ||||||||||||||||||||
Sbjct: 1295 ttttgagcttggtagcataa 1314



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>gb|BC042872.1| Homo sapiens transmembrane protein 26, mRNA (cDNA clone MGC:35010
            IMAGE:5164050), complete cds
          Length = 2581

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  tttgagcttggtagcataat 318
            ||||||||||||||||||||
Sbjct: 1541 tttgagcttggtagcataat 1522



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>ref|XM_590478.2| PREDICTED: Bos taurus similar to RIKEN cDNA 6430402H13 gene
           (LOC512879), mRNA
          Length = 1630

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 cagcagcgacaatagcagca 398
           ||||||||||||||||||||
Sbjct: 42  cagcagcgacaatagcagca 23



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>gb|AC123052.4| Mus musculus chromosome 13 clone RP24-373D10, complete sequence
          Length = 175595

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 688  cattctgctcattctttcataaac 711
            ||||||||| ||||||||||||||
Sbjct: 4872 cattctgctaattctttcataaac 4895



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>gb|AC116587.4| Mus musculus BAC clone RP23-409C18 from 12, complete sequence
          Length = 202651

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 509 ttcttttccccagcataggtaagc 532
           ||||||||||||||| ||||||||
Sbjct: 761 ttcttttccccagcagaggtaagc 784



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>dbj|AK124367.1| Homo sapiens cDNA FLJ42376 fis, clone UTERU2035323
          Length = 2342

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 tttgagcttggtagcataat 318
           ||||||||||||||||||||
Sbjct: 169 tttgagcttggtagcataat 150



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>gb|AC068892.7| Homo sapiens chromosome 10 clone RP11-116D21, complete sequence
          Length = 161178

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   tttgagcttggtagcataat 318
             ||||||||||||||||||||
Sbjct: 24057 tttgagcttggtagcataat 24038



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>gb|AC156035.5| Mus musculus BAC clone RP23-302M20 from chromosome 12, complete
             sequence
          Length = 187168

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 509   ttcttttccccagcataggtaagc 532
             ||||||||||||||| ||||||||
Sbjct: 26122 ttcttttccccagcagaggtaagc 26099



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>gb|AC080166.6| Homo sapiens BAC clone RP11-813C7 from 2, complete sequence
          Length = 179961

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    gacaatagcagcaagcccca 405
              ||||||||||||||||||||
Sbjct: 139154 gacaatagcagcaagcccca 139135



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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 562     catagctgttagggtgagga 581
               ||||||||||||||||||||
Sbjct: 1245383 catagctgttagggtgagga 1245402



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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 373    caatcccagcagcgacaatagcagcaag 400
              ||||| |||||||| |||||||||||||
Sbjct: 637612 caatcacagcagcggcaatagcagcaag 637639



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>gb|AC132433.3| Mus musculus BAC clone RP23-214L14 from 13, complete sequence
          Length = 229555

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 688    cattctgctcattctttcataaac 711
              ||||||||| ||||||||||||||
Sbjct: 198496 cattctgctaattctttcataaac 198519



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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    cagcagcgacaatagcagca 398
              ||||||||||||||||||||
Sbjct: 745791 cagcagcgacaatagcagca 745810


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,332,493
Number of Sequences: 3902068
Number of extensions: 6332493
Number of successful extensions: 114573
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114330
Number of HSP's gapped (non-prelim): 232
length of query: 727
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 704
effective length of database: 17,143,297,704
effective search space: 12068881583616
effective search space used: 12068881583616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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