ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20d12 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 176 bits (447), Expect = 2e-44 Identities = 84/85 (98%), Positives = 84/85 (98%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 KHSSDELYLGQR TPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP Sbjct: 774 KHSSDELYLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 833 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 YMLLYPNTSDHKGAAAGLTAKGIPN Sbjct: 834 YMLLYPNTSDHKGAAAGLTAKGIPN 858
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 146 bits (368), Expect = 3e-35 Identities = 70/85 (82%), Positives = 75/85 (88%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 KHSSDE+YLGQR TP WTSD +ALE F+RFSDRLVEIE KVVGMN D LKNRNGPA+FP Sbjct: 778 KHSSDEVYLGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFP 837 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 YMLLYPNTSD GAAAG+TAKGIPN Sbjct: 838 YMLLYPNTSDVTGAAAGITAKGIPN 862
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 142 bits (357), Expect = 6e-34 Identities = 66/85 (77%), Positives = 75/85 (88%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 KHS+DE+YLGQR TPEWTSDPKALE FKRFS +LVEIESKV+ MN DP LKNR GPA FP Sbjct: 775 KHSADEIYLGQRDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFP 834 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y L++PNTSD+KGAA G+TA+GIPN Sbjct: 835 YTLMFPNTSDNKGAAEGITARGIPN 859
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 135 bits (339), Expect = 7e-32 Identities = 65/85 (76%), Positives = 69/85 (81%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 KHSSDE+YLGQR TPEWTSD KALE FKRF RL EIES+VV MN DP KNR GP FP Sbjct: 782 KHSSDEVYLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFP 841 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y LLYPNTSD KG AAGL+A+GIPN Sbjct: 842 YTLLYPNTSDLKGDAAGLSARGIPN 866
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 122 bits (307), Expect = 3e-28 Identities = 60/86 (69%), Positives = 67/86 (77%), Gaps = 1/86 (1%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 KHSSDE+YLGQR TPEWTSD KAL+ FKRF RLV+IE+++ MN + LKNRNGP K P Sbjct: 788 KHSSDEVYLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMP 847 Query: 218 YMLLYPNTSD-HKGAAAGLTAKGIPN 144 YMLLYPNTSD K GLTA GIPN Sbjct: 848 YMLLYPNTSDVTKEKGQGLTAMGIPN 873
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 100 bits (248), Expect = 2e-21 Identities = 45/85 (52%), Positives = 62/85 (72%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 +H+SDELYLG+R P WTSD +ALE FK+F ++L EIE K+ N+D +L+NR+GP + P Sbjct: 779 RHASDELYLGERDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMP 838 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y LLYP++ + GLT +GIPN Sbjct: 839 YTLLYPSSKE------GLTFRGIPN 857
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 99.4 bits (246), Expect = 4e-21 Identities = 46/85 (54%), Positives = 58/85 (68%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 +H+SDE+YLGQR P WT++ KAL+ FKRF +L EIE K++G N D L+NRNGP K P Sbjct: 779 RHASDEVYLGQRDNPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMP 838 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y +L P D GLT +GIPN Sbjct: 839 YTVLLPTCEDE-----GLTFRGIPN 858
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 99.0 bits (245), Expect = 5e-21 Identities = 46/85 (54%), Positives = 57/85 (67%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 +H+SDE+YLG+R TP WT+D KALE FKRF +L IE K+ N DP L+NR GP + P Sbjct: 782 RHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLP 841 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y LL H+ + GLT KGIPN Sbjct: 842 YTLL------HRSSEEGLTFKGIPN 860
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 95.5 bits (236), Expect = 6e-20 Identities = 43/85 (50%), Positives = 61/85 (71%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 +H+SDE+YLGQR P WTSD KAL+ F++F ++L EIE+K+ N+DP L +R GP + P Sbjct: 782 RHASDEVYLGQRENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLP 841 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y LL+P++ + GLT +GIPN Sbjct: 842 YTLLHPSSKE------GLTFRGIPN 860
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 94.7 bits (234), Expect = 1e-19 Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 1/85 (1%) Frame = -1 Query: 395 HSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELK-NRNGPAKFP 219 H+SDE+YLGQR P WTSD KAL+ F++F ++L EIE K+V N+DP L+ NR GP + P Sbjct: 757 HASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLP 816 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y LLYP++ + GLT +GIPN Sbjct: 817 YTLLYPSSEE------GLTFRGIPN 835
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 94.7 bits (234), Expect = 1e-19 Identities = 44/85 (51%), Positives = 58/85 (68%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 +H+SDE+YLGQR P WTSD KAL+ F++F ++L EIE K+ N+D L NR GP + P Sbjct: 784 RHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLP 843 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y LL+PN+ GLT +GIPN Sbjct: 844 YTLLHPNSE-------GLTCRGIPN 861
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 94.0 bits (232), Expect = 2e-19 Identities = 43/85 (50%), Positives = 61/85 (71%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 +H+SDE+YLG+R P WTSD +ALE FKRF ++L +IE+K+ N+D +L+NR GP + P Sbjct: 775 RHASDEVYLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMP 834 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y LL P++ + GLT +GIPN Sbjct: 835 YTLLLPSSKE------GLTFRGIPN 853
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 89.4 bits (220), Expect = 4e-18 Identities = 46/86 (53%), Positives = 57/86 (66%), Gaps = 1/86 (1%) Frame = -1 Query: 398 KHSSDELYLGQRXTPE-WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKF 222 +H+SDE YLGQR + WTSD LE FKRF +L EIE K++ N D L+NR GPAK Sbjct: 770 RHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKM 829 Query: 221 PYMLLYPNTSDHKGAAAGLTAKGIPN 144 PY LLYP++ + GLT +GIPN Sbjct: 830 PYTLLYPSSEE------GLTFRGIPN 849
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 86.7 bits (213), Expect = 3e-17 Identities = 40/85 (47%), Positives = 54/85 (63%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 +H++DE+YLGQR +PEWT D + L F RF +L +IE +++ N D L NR+GP P Sbjct: 779 RHTTDEIYLGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAP 838 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y LL+P + GLT KGIPN Sbjct: 839 YTLLFPTSE------GGLTGKGIPN 857
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 86.7 bits (213), Expect = 3e-17 Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 1/84 (1%) Frame = -1 Query: 398 KHSSDELYLGQRXTPE-WTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKF 222 +H+SDE+YLG+R + WTSD LE FKRF +L EIE K+V N+D L+NR GPAK Sbjct: 664 RHASDEIYLGERDGGDHWTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKM 723 Query: 221 PYMLLYPNTSDHKGAAAGLTAKGI 150 PY LLYP++ + GLT +GI Sbjct: 724 PYTLLYPSSEE------GLTFRGI 741
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 85.1 bits (209), Expect = 8e-17 Identities = 39/85 (45%), Positives = 55/85 (64%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 +H++DE+YLGQR +PEWT D + L F+RF ++L +IE +++ N + L NR GP P Sbjct: 778 RHTTDEIYLGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAP 837 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y LL+P + GLT KGIPN Sbjct: 838 YTLLFPTSE------GGLTGKGIPN 856
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 84.7 bits (208), Expect = 1e-16 Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 1/86 (1%) Frame = -1 Query: 398 KHSSDELYLGQRXT-PEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKF 222 +H+SDE YLG+R +WT+D E FKRF +L EIE K+ N+D L+NR GP K Sbjct: 783 RHASDEQYLGERIEGDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKM 842 Query: 221 PYMLLYPNTSDHKGAAAGLTAKGIPN 144 PY LLYP++ + GLT +GIPN Sbjct: 843 PYTLLYPSSEE------GLTCRGIPN 862
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 84.0 bits (206), Expect = 2e-16 Identities = 40/85 (47%), Positives = 55/85 (64%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFP 219 +H+SDE+YLGQR + EWT D + L F+RF L +IE++++ MN KNR+GP P Sbjct: 777 RHASDEVYLGQRDSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVP 836 Query: 218 YMLLYPNTSDHKGAAAGLTAKGIPN 144 Y LL+P + + GLT KGIPN Sbjct: 837 YTLLFPTSEE------GLTGKGIPN 855
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 83.6 bits (205), Expect = 2e-16 Identities = 39/84 (46%), Positives = 55/84 (65%) Frame = -1 Query: 395 HSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPY 216 HSSDE+YLGQR + EW ++ +ALE F++F +++ EIE + N D LKNR G K PY Sbjct: 778 HSSDEVYLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPY 837 Query: 215 MLLYPNTSDHKGAAAGLTAKGIPN 144 LL+P++ G+T +GIPN Sbjct: 838 TLLFPSSE------GGVTGRGIPN 855
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 65.1 bits (157), Expect = 9e-11 Identities = 34/84 (40%), Positives = 46/84 (54%) Frame = -1 Query: 395 HSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPY 216 HS DE Y+G+ P W ++P F++FS RL E E + N++PE KNR G PY Sbjct: 815 HSPDEEYMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPY 874 Query: 215 MLLYPNTSDHKGAAAGLTAKGIPN 144 LL P + G+T +GIPN Sbjct: 875 ELLKPFSE------PGVTGRGIPN 892
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 64.3 bits (155), Expect = 1e-10 Identities = 36/84 (42%), Positives = 44/84 (52%) Frame = -1 Query: 395 HSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPY 216 HS+DE YLG T W SD + F+ RL EIE + G N D +LKNR G PY Sbjct: 860 HSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPY 919 Query: 215 MLLYPNTSDHKGAAAGLTAKGIPN 144 L+ P + AG+T GIPN Sbjct: 920 QLMKPFSD------AGVTGMGIPN 937
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 63.2 bits (152), Expect = 3e-10 Identities = 35/84 (41%), Positives = 44/84 (52%) Frame = -1 Query: 395 HSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPY 216 HS+DE YLG T W SD + F+ RL EIE + G N D +LKNR G PY Sbjct: 843 HSTDEEYLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPY 902 Query: 215 MLLYPNTSDHKGAAAGLTAKGIPN 144 L+ P + +G+T GIPN Sbjct: 903 QLMKPFSD------SGVTGMGIPN 920
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 63.2 bits (152), Expect = 3e-10 Identities = 31/84 (36%), Positives = 46/84 (54%) Frame = -1 Query: 395 HSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPY 216 HS+DE YLG+R WT+DP AL + F+ + E ++ N DP +NR G PY Sbjct: 818 HSADEEYLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPY 877 Query: 215 MLLYPNTSDHKGAAAGLTAKGIPN 144 L+ P+ + G+T +G+PN Sbjct: 878 ELMAPS------SGPGITCRGVPN 895
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 60.1 bits (144), Expect = 3e-09 Identities = 28/69 (40%), Positives = 39/69 (56%) Frame = -1 Query: 395 HSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPY 216 HSSDE Y+G P WT D + F+ F + +I +V N+DP+ KNR+G PY Sbjct: 845 HSSDEEYMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPY 904 Query: 215 MLLYPNTSD 189 +LL P+ D Sbjct: 905 VLLRPSDGD 913
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 52.4 bits (124), Expect = 6e-07 Identities = 30/83 (36%), Positives = 43/83 (51%) Frame = -1 Query: 395 HSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPY 216 HS DE Y+G++ W ++P F+RF +L +E + N + LKNR G Y Sbjct: 815 HSPDEEYIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKY 874 Query: 215 MLLYPNTSDHKGAAAGLTAKGIP 147 LL P TS+H G+T G+P Sbjct: 875 ELLKP-TSEH-----GVTGMGVP 891
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 52.0 bits (123), Expect = 8e-07 Identities = 28/84 (33%), Positives = 42/84 (50%) Frame = -1 Query: 395 HSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPY 216 H+SDE Y+G P W D + + F+ F ++ +I +V N D +NR+G PY Sbjct: 846 HASDEEYMGTHQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPY 905 Query: 215 MLLYPNTSDHKGAAAGLTAKGIPN 144 +LL P + A + GIPN Sbjct: 906 VLLRPLNGNPMDAKT-VMEMGIPN 928
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 45.1 bits (105), Expect = 9e-05 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 3/87 (3%) Frame = -1 Query: 395 HSSDELYLGQRXTP---EWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAK 225 HS DE YLG+ WT+D A+ F+ + E + N D KNR G Sbjct: 834 HSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGV 893 Query: 224 FPYMLLYPNTSDHKGAAAGLTAKGIPN 144 PY LL P+ + G+T +G+PN Sbjct: 894 LPYELLAPS------SPPGVTCRGVPN 914
>COL19_CAEEL (P18835) Cuticle collagen 19 precursor| Length = 289 Score = 37.7 bits (86), Expect = 0.015 Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 5/70 (7%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQG-GGHEP*PGAQEPQ----RPG*VSLHAALPQHLRPQGR 178 GPKGP G+ PAGG+ +G G PG Q PQ RPG A P P+G Sbjct: 150 GPKGPSGLPGSAGPAGGNGRRGPPGPVGGPGEQGPQGDAGRPG----AAGRPGPAGPRGE 205 Query: 177 RCRAYRQGHP 148 Y+ G P Sbjct: 206 PGTEYKPGQP 215
>SPD2_NEPCL (P46804) Spidroin 2 (Dragline silk fibroin 2) (Fragment)| Length = 627 Score = 32.3 bits (72), Expect = 0.62 Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 9/63 (14%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQG-GGHEP--------*PGAQEPQRPG*VSLHAALPQHLR 190 GP GPG A A G +QG GG+ P PG Q P PG + AA Sbjct: 157 GPSGPGSAAAAAAAASGPGQQGPGGYGPGQQGPGGYGPGQQGPSGPGSAAAAAAAASGPG 216 Query: 189 PQG 181 QG Sbjct: 217 QQG 219 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/45 (40%), Positives = 21/45 (46%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG*VSLHAA 208 G GPG A AG ++ GG+ PG Q P PG S AA Sbjct: 345 GGYGPGSASAAAAAAGPGQQGPGGYG--PGQQGPSGPGSASAAAA 387 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 7/52 (13%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAG------GDREQG-GGHEP*PGAQEPQRPG*VSLHAA 208 GP GPG A A G +QG GG+ PG Q P PG S AA Sbjct: 375 GPSGPGSASAAAAAAAAGPGGYGPGQQGPGGYA--PGQQGPSGPGSASAAAA 424 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQG-GGHEP---*PGAQEPQRPG 229 GP GPG A A G +QG GG+ P PG P + G Sbjct: 198 GPSGPGSAAAAAAAASGPGQQGPGGYGPGQQGPGGYGPGQQG 239
>PAX6_DROME (O18381) Paired box protein Pax-6 (Protein eyeless)| Length = 857 Score = 32.3 bits (72), Expect = 0.62 Identities = 14/45 (31%), Positives = 20/45 (44%) Frame = +3 Query: 261 MVHAHHLALDLHQPVAEPLEHLQGLWVRGPLRRVPLPEVQLVGGV 395 +VH +H AL HQ + P H G W L +P+ + V Sbjct: 303 LVHGNHQALQQHQQQSWPPRHYSGSWYPTSLSEIPISSAPNIASV 347
>GLGA_PROMA (Q7VBP0) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial| glycogen] synthase) Length = 501 Score = 32.0 bits (71), Expect = 0.81 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKN 243 K + ++Y +R E+ + K + +K S +E+E VG + DP LKN Sbjct: 431 KRAMTQMYSWERSAMEYETMYKEVSGYKEPSPDAIEVEKFSVGQDADPSLKN 482
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 31.6 bits (70), Expect = 1.1 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 13/78 (16%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG*V-------SLHAALPQHLRPQ 184 GP G G+ PAGG +Q GG++ Q R SL++ + L P+ Sbjct: 1084 GPPGSPGLPGPAGPAGGGYDQSGGYDEYRADQPSFRAKDYEVDATIKSLNSQIENLLTPE 1143 Query: 183 G------RRCRAYRQGHP 148 G R CR R HP Sbjct: 1144 GSKKNPARTCRDIRLSHP 1161
>HYDL_STRCO (P42534) Putative polyketide hydroxylase (EC 1.14.13.-) (WhiE ORF| VIII) Length = 627 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/36 (44%), Positives = 16/36 (44%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQR 235 GP GPGG P G GGG PG PQR Sbjct: 435 GPGGPGGPGGPDGPRGAGGAPGGGPGGGPGGGGPQR 470
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%) Frame = -3 Query: 345 LGPKGPGGVQAVQRPAGGDREQGGGH----EP*PGAQEPQRP 232 LGP+GP G Q +Q P G QG H + PG+Q Q P Sbjct: 729 LGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGP 770
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 30.8 bits (68), Expect = 1.8 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 13/79 (16%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG*VSLHAALPQ-------HLRPQ 184 GP GP G P+GG + G G E Q ++P + A L L P+ Sbjct: 1081 GPPGPPGPPGHAGPSGGGYDGGDGGEYYRADQPERKPKDYEVDATLKSLNQQIEVILTPE 1140 Query: 183 G------RRCRAYRQGHPQ 145 G R CR R HP+ Sbjct: 1141 GSRKNPARTCRDLRLSHPE 1159
>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3511 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = +3 Query: 279 LALDLHQPVAE-PLEHLQGLWVRGPLRRVPLPEVQL-VGGVLRQHLQQRHADDGLDLAR 449 L+ H+ + + PL+ +Q W + P P V++ +G V Q Q + GL+L R Sbjct: 3426 LSTKTHELIVKIPLKEIQSTWTQKPTANSSYPYVEISLGDVAAQRTMQLQLEQGLELCR 3484
>CSP_PLAYO (P06914) Circumsporozoite protein precursor (CS)| Length = 367 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRP 232 P+GPG Q P G QG G P Q PQ+P Sbjct: 204 PQGPGAPQGPGAPQGPGAPQGPGAPQEPPQQPPQQP 239 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 P+GPG Q P G QG G PGA PQ PG Sbjct: 192 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 226 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 P+GPG Q P G QG G PGA PQ PG Sbjct: 186 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 220 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 P+GPG Q P G QG G PGA PQ PG Sbjct: 180 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 214 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 P+GPG Q P G QG G PGA PQ PG Sbjct: 174 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 208 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 P+GPG Q P G QG G PGA PQ PG Sbjct: 168 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 202 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 P+GPG Q P G QG G PGA PQ PG Sbjct: 162 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 196 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 P+GPG Q P G QG G PGA PQ PG Sbjct: 156 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 190 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 P+GPG Q P G QG G PGA PQ PG Sbjct: 150 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 184 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/37 (45%), Positives = 18/37 (48%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 P+GPG Q P G QG G PGA PQ PG Sbjct: 144 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGA--PQGPG 178 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGGDREQGGGHEP*PGA--QEPQRP 232 P+GPG Q P G QG G PGA + PQ+P Sbjct: 198 PQGPGAPQGPGAPQGPGAPQGPGAPQGPGAPQEPPQQP 235
>PRPP_HUMAN (P81489) Salivary proline-rich protein II-1 (Fragment)| Length = 174 Score = 30.0 bits (66), Expect = 3.1 Identities = 19/67 (28%), Positives = 28/67 (41%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG*VSLHAALPQHLRPQGRRCRAY 163 GP P G + P GG++ QG P +EP G P +P+GR + Sbjct: 53 GPPPPPGKPEGRPPQGGNQSQGPPPHPPGKPEEPPPQGGNQSQGTPPPPGKPEGRPPQQG 112 Query: 162 RQGHPQQ 142 G P++ Sbjct: 113 GPGKPER 119
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 GP+ GG RP GG R QGG + GA +R G Sbjct: 274 GPRPQGG----PRPQGGSRPQGGSAQGAQGAPSQERQG 307
>ZN759_MOUSE (Q80VM4) Zinc finger protein 579| Length = 562 Score = 29.6 bits (65), Expect = 4.0 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = +3 Query: 267 HAHHLALDLHQPVAEPLEHLQGLWVRGPLRRVPLPEVQLVGGVLRQHLQQRHADDGLDLA 446 HA L + A HL+G + PLR P LR+HL Q HA +DL+ Sbjct: 74 HACPLCPKAFRRPAHLSRHLRGHGPQPPLRCAACPRTFPEPAQLRRHLAQEHAGSEVDLS 133
>DYHC_PARTE (Q27171) Dynein heavy chain, cytosolic (DYHC) (DHC08)| Length = 4540 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -1 Query: 383 ELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMN 264 +L +GQ WT + K+F+D++ E+E V G+N Sbjct: 773 QLQIGQGFNYLWTHKTQLQPYVKKFTDKVFELEQAVNGLN 812
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 7/45 (15%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGG-------DREQGGGHEP*PGAQEPQRPG 229 GP G GG Q P G R QGGG P PG PG Sbjct: 260 GPGGQGGGPRPQAPGGNRPSPGSMPRPQGGGAGPRPGGGPRPNPG 304 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/38 (44%), Positives = 19/38 (50%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 G +GPGG A + GG R GGG PG RPG Sbjct: 321 GGRGPGG--AGRPGGGGGRPGGGGFAGRPGGGGGGRPG 356
>COL8_CAEEL (P18833) Cuticle collagen 8 precursor| Length = 282 Score = 29.6 bits (65), Expect = 4.0 Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Frame = -3 Query: 345 LGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQ-EPQRPG*VSLHAALPQHLRPQGRRCR 169 +GP GP G Q P G QGG PG Q + RPG A P P+G Sbjct: 152 VGPAGPAGDQGRHGPPGPTGGQGG-----PGEQGDAGRPG----AAGCPGPPGPRGEPGT 202 Query: 168 AYRQG 154 YR G Sbjct: 203 EYRPG 207
>HUNB_DROYA (O62541) Protein hunchback| Length = 759 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +3 Query: 309 EPLEHLQGLWVRGPLRRVPLPEVQLVGGVLRQHLQQRHADDGLD 440 EP HL G V R+ P+P + L+Q QQ+H +D Sbjct: 30 EPGHHLDGNSVASSPRQSPIPSTNHLEQFLKQQQQQQHQQQPMD 73
>ZN759_HUMAN (Q8NAF0) Zinc finger protein 579| Length = 562 Score = 29.3 bits (64), Expect = 5.2 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = +3 Query: 267 HAHHLALDLHQPVAEPLEHLQGLWVRGPLRRVPLPEVQLVGGVLRQHLQQRHADDGLDLA 446 HA L + A HL+G + PLR P LR+HL Q HA ++LA Sbjct: 72 HACPLCPKAFRRPAHLSRHLRGHGPQPPLRCAACPRTFPEPAQLRRHLAQEHAGGEVELA 131 Query: 447 RDGV 458 + V Sbjct: 132 IERV 135
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 29.3 bits (64), Expect = 5.2 Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Frame = -3 Query: 348 DLGPKGPGGVQAVQRPAG--GDREQGGGHEP*PGAQEPQRPG*VSLHAALPQHLRPQGRR 175 DLGP G GV + G GD GG P + EP PG P P G Sbjct: 1266 DLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPG-------PPGKRGPSGHM 1318 Query: 174 CRAYRQG 154 R R+G Sbjct: 1319 GREGREG 1325
>TTDN1_HUMAN (Q8TAP9) TTD nonphotosensitive 1 protein| Length = 179 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/55 (30%), Positives = 21/55 (38%) Frame = -3 Query: 303 PAGGDREQGGGHEP*PGAQEPQRPG*VSLHAALPQHLRPQGRRCRAYRQGHPQQH 139 P GG G PG P+ P + + P H P G R R Y H +H Sbjct: 16 PGGGGWGSGSSFRGTPGGGGPRPPSPRDGYGS-PHHTPPYGPRSRPYGSSHSPRH 69
>RS5_GLOVI (Q7NEG9) 30S ribosomal protein S5| Length = 223 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQGG 274 GP GPGG Q P DRE GG Sbjct: 17 GPGGPGGPGPEQAPEDPDRESGG 39
>SYI_CHLTR (O84022) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1036 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = -1 Query: 398 KHSSDELYLGQRXTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDP 255 K S DE LGQ P W D ++ E + S + +VG +++P Sbjct: 247 KESGDEYILGQESLPRWFPDRESYEWIGQLSGK------SLVGQSYEP 288
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 29.3 bits (64), Expect = 5.2 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -3 Query: 345 LGPKGPGGVQAVQRPAGGDREQGGGHEP 262 +GP GP G + +Q P G ++G EP Sbjct: 1028 MGPSGPAGARGIQGPQGPRGDKGEAGEP 1055
>CBPA1_PIG (P09954) Carboxypeptidase A1 precursor (EC 3.4.17.1)| Length = 419 Score = 28.9 bits (63), Expect = 6.8 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 7/40 (17%) Frame = +3 Query: 309 EPLEHLQGLWVRGPLR-------RVPLPEVQLVGGVLRQH 407 E LEHLQ + RGP R RVP P +Q V L H Sbjct: 43 EDLEHLQLDFWRGPARPGFPIDVRVPFPSIQAVKVFLEAH 82
>COAA1_CHICK (P08125) Collagen alpha-1(X) chain precursor| Length = 674 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQG----GGHEP*PGAQEPQRPG*VSLHAALPQHLRPQG 181 GP+GP G Q + P G E G G + G P RPG + LP PQG Sbjct: 152 GPQGPPGAQGPRGPPGEKGEPGVPGINGQKGEMGFGVPGRPG----NRGLPGPQGPQG 205
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 G GP GVQ PAG + ++G EP P P PG Sbjct: 438 GEPGPAGVQGPPGPAGEEGKRGARGEPGPSGL-PGPPG 474
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = -3 Query: 348 DLGPKGPGGVQAVQRPAGGDREQGGGHEP*P--GAQEPQRPG 229 D GP GP G+Q + G E G EP P A P PG Sbjct: 631 DTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPG 672
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -3 Query: 342 GPKGPGGVQAVQRPAGGDREQG-GGHEP*PGAQEPQRP 232 GP GP G+Q + P+G E G GG PG P+ P Sbjct: 1150 GPPGPIGLQGLPGPSGEKGETGDGGPMGPPGPPGPRGP 1187
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = -3 Query: 348 DLGPKGPGGVQAVQRPAG--GDREQGG--GHEP*PGAQEPQ 238 D+GP+GP GVQ PAG G R + G G PG P+ Sbjct: 587 DVGPQGPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPK 627
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 7/43 (16%) Frame = -3 Query: 339 PKGPGGVQAVQRPAGG----DREQG--GGHEP*PGAQ-EPQRP 232 P+G GG RP GG R QG GG P PG PQ P Sbjct: 252 PQGAGGQDRAPRPQGGPGGAPRPQGGPGGARPTPGGMPRPQAP 294
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -3 Query: 339 PKGPGGVQ-AVQRPAGGDREQGGGHEP*PGAQEPQRPG 229 P PG + RP GG R+ GGG PG Q QRPG Sbjct: 202 PPRPGSPRIGAPRPGGGQRQGGGGR---PGFQ--QRPG 234
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = -3 Query: 348 DLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQE 244 D G GP G +Q P G GG EP P Q+ Sbjct: 1140 DKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQ 1174
>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = -3 Query: 348 DLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQEP 241 D GPKGP G +Q P G E+G G PG + P Sbjct: 224 DRGPKGPPGPPGLQGPKG---EKGFGMPGLPGLKGP 256
>CAD16_MOUSE (O88338) Cadherin-16 precursor (Kidney-specific cadherin)| (Ksp-cadherin) Length = 830 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -1 Query: 278 VVGMNHDPELKNRNGPAKF 222 V G++ DP+L NRNGP F Sbjct: 688 VSGVSEDPDLANRNGPYSF 706
>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)| (EBNA-1) Length = 641 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Frame = -3 Query: 342 GPKGPGGV-----QAVQRPAGGDREQGGGHEP*PGAQEPQRPG*VSLHAALPQHLRPQGR 178 G +G GG + +R GG RE+ G G + P+ P S + P P GR Sbjct: 343 GGRGRGGSGGRRGRGRERARGGSRERARGRGRGRGEKRPRSPSSQSSSSGSPPRRPPPGR 402 Query: 177 R 175 R Sbjct: 403 R 403
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = -3 Query: 348 DLGPKGPGGVQAVQRPAGGDREQGGGHEP*PGAQ--EPQRPG 229 D GP GP G+Q + G E G EP P + P PG Sbjct: 630 DSGPPGPQGLQGIPGTGGPPGENGKPGEPGPKGEVGAPGAPG 671
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = -3 Query: 348 DLGPKGPGGVQAVQRPAGGDREQGGGHEP*P--GAQEPQRPG 229 D GP GP G+Q + +G E G EP P A P PG Sbjct: 630 DAGPPGPQGLQGIPGTSGPPGENGKPGEPGPKGEAGAPGVPG 671 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,836,452 Number of Sequences: 219361 Number of extensions: 1038416 Number of successful extensions: 4353 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 3367 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4241 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
