>PTPX_CANAL (P43078) Probable tyrosine-protein phosphatase (EC 3.1.3.48)|
          Length = 597

 Score = 34.3 bits (77), Expect = 0.35
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
 Frame = -3

Query: 341 DLIEAVKQSLASGQTAPPPSAVTLAPANVILEKEPRPGAHHSSHSVCFMG*MSSLNGRDS 162
           D I  + +   +  +  P    T+ P +    + P PG H  + S+  +   SS +    
Sbjct: 95  DSINDINRKEQNSFSIQPNQTPTMLPTSSYTLQRP-PGLHEYTSSISSISSTSSNSTSAP 153

Query: 161 V------YSPRHGEGPNSTMLNPNEFYASLDFH 81
           V      YSP+H   PNS  LN N    SL+ H
Sbjct: 154 VSPALINYSPKHSRKPNSLNLNRNMKNLSLNLH 186

>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)|
          Length = 2001

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 23/76 (30%), Positives = 31/76 (40%)
 Frame = -3

Query: 320 QSLASGQTAPPPSAVTLAPANVILEKEPRPGAHHSSHSVCFMG*MSSLNGRDSVYSPRHG 141
           QS A+    PPP AV  +  + I    P P + +S  +       SS N R     P   
Sbjct: 58  QSQAAAAAPPPPPAVASSSLHGIAASVPPPSSTNSMRATPHSS--SSFNLRSPTREPSEY 115

Query: 140 EGPNSTMLNPNEFYAS 93
             P S++  P  F AS
Sbjct: 116 RHPLSSLATPAPFAAS 131

>PKNX1_HUMAN (P55347) Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox|
           protein PREP-1)
          Length = 435

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = -3

Query: 386 KAKAMATAQVMEMWPDLIEAVKQSLASGQTAPPPSAVTLAPANVILEKEP 237
           K K      V   WPD       S+ASG   PPPS +T++   V+    P
Sbjct: 332 KKKTAQNRPVQRFWPD-------SIASGVAQPPPSELTMSEGAVVTITTP 374

>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog|
          Length = 328

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -3

Query: 302 QTAPPPSAVTLAPANVILEKEP 237
           Q APPPSA T  PA  ++E EP
Sbjct: 156 QPAPPPSAQTFQPAEPVVEAEP 177

>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog|
          Length = 328

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -3

Query: 302 QTAPPPSAVTLAPANVILEKEP 237
           Q APPPSA T  PA  ++E EP
Sbjct: 156 QPAPPPSAQTFQPAEPVVEAEP 177

>CET1_CRYNE (Q5KEQ1) mRNA capping enzyme beta subunit (EC 3.1.3.33)|
           (Polynucleotide 5'-triphosphatase) (mRNA
           5'-triphosphatase) (TPase)
          Length = 397

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 227 AHHSSHSVCFMG*MSSLNGRDSVYSPRHGEGP 132
           +HHS H+       S  +G   VY PRHG+ P
Sbjct: 109 SHHSHHNGHSGHAQSDQHGNGQVYRPRHGQAP 140


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,138,553
Number of Sequences: 219361
Number of extensions: 1641942
Number of successful extensions: 4372
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4369
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)