Clone Name | rbasd20c21 |
---|---|
Clone Library Name | barley_pub |
>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28| kDa cold-induced protein) Length = 236 Score = 62.8 bits (151), Expect(2) = 2e-21 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%) Frame = -1 Query: 441 GYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLP-DIDRLVE 265 G++DVVLGG + W + L G L+D +TP L AW ERF + AK V+P D D+L+E Sbjct: 163 GFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLE 222 Query: 264 F 262 F Sbjct: 223 F 223 Score = 58.9 bits (141), Expect(2) = 2e-21 Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 1/59 (1%) Frame = -3 Query: 613 AAYIDQNLVAPWWKMFVG-KTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVG 440 AAY+D + W + G KT++E+ Q +AA+E LE A ECS GKPFFGGD VG Sbjct: 105 AAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVG 163
>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)| (Protein bronze-2) Length = 236 Score = 57.8 bits (138), Expect = 3e-08 Identities = 27/71 (38%), Positives = 42/71 (59%) Frame = -1 Query: 453 ETTSGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDR 274 + G +D+ LG + ++ E L GL L+DA+ TPLL W +RF AK VLPD ++ Sbjct: 158 DAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEK 217 Query: 273 LVEFAKMKRAQ 241 +V+F + + Q Sbjct: 218 VVQFTRFLQVQ 228
>GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.1.18) (Heat| shock protein 26A) (G2-4) Length = 225 Score = 33.5 bits (75), Expect(2) = 8e-05 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = -1 Query: 441 GYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEF 262 G +D+ + W+ + + GL+L + K P+L W + F VLP D L + Sbjct: 154 GLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAY 213 Query: 261 AKMK 250 K + Sbjct: 214 FKAR 217 Score = 32.0 bits (71), Expect(2) = 8e-05 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = -3 Query: 607 YIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVGL 437 +ID +V K +KE+ + ++T A++ LE L++ K FFGG+ GL Sbjct: 103 FIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKD----KKFFGGEEFGL 155
>LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) Length = 219 Score = 37.7 bits (86), Expect(2) = 8e-05 Identities = 20/56 (35%), Positives = 32/56 (57%) Frame = -3 Query: 607 YIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVG 440 YID+ + W KM++ K +E EG K+ ++ ++LE L + KPF+G D G Sbjct: 101 YIDKKIYDTWKKMWLSK-GEEHEEGKKELISIFKQLEETLTD----KPFYGDDTFG 151 Score = 27.7 bits (60), Expect(2) = 8e-05 Identities = 15/61 (24%), Positives = 29/61 (47%) Frame = -1 Query: 453 ETTSGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDR 274 + T G++D+ L +W E ++ + + P L+AW++R E LPD + Sbjct: 147 DDTFGFVDLCLITFSSWFYTYETYGNFKMEE--ECPKLMAWVKRCMERETVSNTLPDAKK 204 Query: 273 L 271 + Sbjct: 205 V 205
>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PCNT107) Length = 221 Score = 34.3 bits (77), Expect(2) = 0.001 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = -1 Query: 441 GYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEF 262 G++D+ L G +W E + P +AW +R E LPD +++EF Sbjct: 153 GFVDIALIGYYSWFYAYETFGNFST--EAECPKFVAWAKRCMQRESVAKSLPDQPKVLEF 210 Query: 261 AKMKRAQKAL 232 K+ R + L Sbjct: 211 VKVLRQKFGL 220 Score = 27.3 bits (59), Expect(2) = 0.001 Identities = 19/58 (32%), Positives = 31/58 (53%) Frame = -3 Query: 613 AAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVG 440 A YID+ L K++ K + E+ K + ++ LE AL + KP+FGG++ G Sbjct: 101 ADYIDKKLYDFGRKLWTTKGE-EQEAAKKDFIECLKVLEGALGD----KPYFGGESFG 153
>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)| (Auxin-regulated protein parC) Length = 221 Score = 34.7 bits (78), Expect = 0.23 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = -1 Query: 441 GYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEF 262 G++D+ L G +W E + P +AW +R E LPD +++EF Sbjct: 153 GFVDIALIGFYSWFYAYETFGNFST--EAECPKFVAWAKRCMQRESVAKSLPDQPKVLEF 210 Query: 261 AKMKRAQKAL 232 K+ R + L Sbjct: 211 VKVLRQKFGL 220
>DAG1_BOVIN (O18738) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 32.7 bits (73), Expect = 0.87 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +3 Query: 192 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 362 LLL + + SH+ EPSE V W+ Q + L++L VP P AV G +R Sbjct: 20 LLLSVAVTQSHWPSEPSEAVRDWENQLEASMHSALSDLHETVPTVVGIPDGTAVVGRSFR 79 Query: 363 QGAP 374 P Sbjct: 80 VTIP 83
>DAG1_HUMAN (Q14118) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 32.0 bits (71), Expect = 1.5 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +3 Query: 192 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 362 LLL + + SH+ EPSE V W+ Q + L++L VP P AV G +R Sbjct: 20 LLLSVVMAQSHWPSEPSEAVRDWENQLEASMHSVLSDLHEAVPTVVGIPDGTAVVGRSFR 79 Query: 363 QGAP 374 P Sbjct: 80 VTIP 83
>DAG1_MOUSE (Q62165) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 893 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Frame = +3 Query: 192 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 362 LLL + + +H+ EPSE V W+ Q + L++ VP P AV G +R Sbjct: 18 LLLSVAVAQAHWPSEPSEAVRDWKNQLEASMHSVLSDFQEAVPTVVGIPDGTAVVGRSFR 77 Query: 363 QGAP 374 P Sbjct: 78 VSIP 81
>YL_DROME (P98163) Putative vitellogenin receptor precursor (Protein yolkless)| (YL) Length = 1984 Score = 30.8 bits (68), Expect = 3.3 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = +2 Query: 296 ALAGS-IPPKRSIHA-SSNGVLVASRSSRPQSASVPCIHA 409 AL GS I K SI+ ++ ++VA RS +PQ AS PC HA Sbjct: 1702 ALYGSRICHKISINVLNAQDIVVAGRSRQPQKASHPCAHA 1741
>GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC 2.5.1.18)| (Auxin-regulated protein parA) (STR246C protein) Length = 220 Score = 30.8 bits (68), Expect = 3.3 Identities = 18/58 (31%), Positives = 33/58 (56%) Frame = -3 Query: 613 AAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVG 440 A YID+ + + +++ GK + ++ E K+ + ++ LE L K +FGGDN+G Sbjct: 100 ADYIDKKIYSTGRRVWSGKGE-DQEEAKKEFIEILKTLEGEL----GNKTYFGGDNLG 152
>DAG1_RABIT (Q28685) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 30.4 bits (67), Expect = 4.3 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +3 Query: 192 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 362 LLL + + SH+ EPSE V W+ Q + L++L +P P AV G +R Sbjct: 20 LLLCVAVAQSHWPSEPSEAVRDWENQLEASMHSVLSDLHEALPTVVGIPDGTAVVGRSFR 79 Query: 363 QGAP 374 P Sbjct: 80 VTIP 83
>CTPV_MYCTU (P77894) Probable cation-transporting ATPase V (EC 3.6.3.-)| Length = 770 Score = 30.4 bits (67), Expect = 4.3 Identities = 19/67 (28%), Positives = 26/67 (38%) Frame = -2 Query: 521 ARSSGEARGGPKGMLQWKAVLWRRQRRATLTSCWVVWSHGCKEPRRSVAWSSLTPPKPRY 342 +R G RG +G W RR+RR L W+ G S+ + + Y Sbjct: 109 SRCGGRPRGPVRGSASWPGEQNRRERRTWLPRVWLALPLGLLALGSSMFFGA-------Y 161 Query: 341 CWHGWSA 321 W GW A Sbjct: 162 PWAGWLA 168
>RIMS1_HUMAN (Q86UR5) Regulating synaptic membrane exocytosis protein 1| (Rab3-interacting molecule 1) (RIM 1) Length = 1692 Score = 30.4 bits (67), Expect = 4.3 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Frame = +3 Query: 363 QGAPGHRAPR--FLASMRPYHPTRRQCSPTLSPPKNGFPLEHSLRATSS 503 QG P R P S+ HPTRR SPT + P++H R S Sbjct: 962 QGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTRDVDS 1010
>RGF3_SCHPO (Q9Y7U5) Rho1 guanine nucleotide exchange factor 3| Length = 1275 Score = 29.6 bits (65), Expect = 7.3 Identities = 22/71 (30%), Positives = 33/71 (46%) Frame = +2 Query: 251 FILANSTNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTT 430 + L N +LS S L S P + S L +S + RPQS P + PPN Sbjct: 196 YSLYNDISLSCSPEPYLPLS-PTRSPARTPSPIRLYSSDALRPQSPLSPSVEYLTPPNPY 254 Query: 431 SM*PDVVSSKE 463 S+ D+ S+++ Sbjct: 255 SLKSDISSTRQ 265
>GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (EC 2.5.1.18)| (Auxin-regulated protein MSR-1) Length = 219 Score = 29.6 bits (65), Expect = 7.3 Identities = 18/58 (31%), Positives = 31/58 (53%) Frame = -3 Query: 613 AAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFFGGDNVG 440 A YID + + +++ GK + ++ E K+ + + LE L K +FGGDN+G Sbjct: 100 ANYIDNKIYSTGRRVWSGKGE-DQEEAKKEFIEIFKTLEGEL----GNKTYFGGDNLG 152
>FUT4_PANTR (Q659K9) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside| 3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV) (Fuc-TIV) Length = 405 Score = 29.3 bits (64), Expect = 9.6 Identities = 15/40 (37%), Positives = 18/40 (45%) Frame = +3 Query: 273 TYQYLAELP*QVPFHQSAPSMPAVTGFWWRQGAPGHRAPR 392 TY +LP +P+ PS P WW A H APR Sbjct: 43 TYACWGQLP-PLPWASPTPSRPVGVLLWWEPFAGRHSAPR 81
>V70K_OYMV (P20130) 66 kDa protein| Length = 597 Score = 29.3 bits (64), Expect = 9.6 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Frame = +3 Query: 177 KIRSTLLLEIPILLSHFR-LEPSEHVSSWQ-TQPTYQYLAELP*QVPFHQSAPSMPAVTG 350 ++RS L + PIL+ HF+ L S ++ S++ +PT + L LP Q P++ T Sbjct: 314 RVRSNSLQQTPILMGHFKSLGQSPNLRSFERPRPTRRSLRLLPLS---PQKVPTVHVPT- 369 Query: 351 FWWRQGAPGHRAPRFLASMRPYHPTRR 431 GH+ P + RP+ P+R+ Sbjct: 370 ----HQQSGHKGP---SLPRPHSPSRQ 389
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 29.3 bits (64), Expect = 9.6 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%) Frame = -1 Query: 483 NAPVESRSLEETTSGYIDVVLGGMVAWMQGTEALCGLELLDATKTP--LLLAWMERF 319 NA S S+EE TS + V GG+V ++ + LC L DA P +LL+ +F Sbjct: 267 NARPFSFSIEEDTSNFGIYVKGGIVTQVKEPKVLCFKALRDAMTDPGEVLLSDFSKF 323
>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1| (Rab3-interacting molecule 1) (RIM 1) Length = 1615 Score = 29.3 bits (64), Expect = 9.6 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Frame = +3 Query: 363 QGAPGHRAPR--FLASMRPYHPTRRQCSPTLSPPKNGFPLEHSLRATSS 503 QG P R P S+ HPTRR SPT + P +H R S Sbjct: 976 QGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPADHRSRHVES 1024
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 29.3 bits (64), Expect = 9.6 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 8/61 (13%) Frame = -2 Query: 572 DVRGQNGQGET*RDEADARSSGEARGGPKGMLQW--------KAVLWRRQRRATLTSCWV 417 +V + G G T R A G ARGGP G +W + + WRR+ +A L W Sbjct: 126 EVPARGGCGPTPR----AGRGGGARGGPPGG-RWGRGRGPGPRVLAWRRREKALLAQLWA 180 Query: 416 V 414 + Sbjct: 181 L 181
>NODAL_HUMAN (Q96S42) Nodal homolog precursor| Length = 347 Score = 29.3 bits (64), Expect = 9.6 Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 17/119 (14%) Frame = -1 Query: 378 GLELLDATKTPLLLAWMERFGGME-----------------PAKAVLPDIDRLVEFAKMK 250 G +L+ T+ L W++R G +E PA VL L+ ++ + Sbjct: 149 GSMVLEVTRP--LSKWLKRPGALEKQMSRVAGECWPRPPTPPATNVL-----LMLYSNLS 201 Query: 249 RAQKALI*NGTTVWESQVTKYSVSSKFMSAWKECHRRHERCQNTKYCSRFSSDVSCNYV 73 + Q+ L T +WE++ + + + W + HRRH ++ C + V N + Sbjct: 202 QEQRQLG-GSTLLWEAESSWRAQEGQLSWEWGKRHRRHHLPDRSQLCRKVKFQVDFNLI 259 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,003,297 Number of Sequences: 219361 Number of extensions: 2130901 Number of successful extensions: 6268 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 5948 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6265 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)