ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20c19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF069838.1| Ice core clone 146-13 18S ribosomal RNA gene, partial sequence Length = 301 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 59 Query: 627 ccggcc 632 |||||| Sbjct: 58 ccggcc 53
>gb|AF069839.1| Ice core clone 146-16 18S ribosomal RNA gene, partial sequence Length = 301 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 59 Query: 627 ccggcc 632 |||||| Sbjct: 58 ccggcc 53
>gb|AY552749.1| Hordeum vulgare subsp. vulgare 18S ribosomal RNA gene, partial sequence Length = 1014 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 265 Query: 627 ccggcc 632 |||||| Sbjct: 264 ccggcc 259
>gb|AY357922.1| Triticum aestivum cultivar Giza 164 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AY357921.1| Triticum aestivum cultivar Gemmieza 5 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AY357920.1| Triticum aestivum cultivar Beni Suef 3 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AY357919.1| Triticum aestivum cultivar Gemmieza 9 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AY357918.1| Triticum aestivum cultivar Sakha 61 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AY357917.1| Triticum aestivum cultivar Sakha 69 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AY357916.1| Triticum aestivum cultivar Sakha 93 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AY357915.1| Triticum aestivum cultivar Gemmieza 7 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AY357914.1| Triticum aestivum cultivar Giza 168 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AY357913.1| Triticum aestivum cultivar Sohag 3 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AY357912.1| Triticum aestivum cultivar Giza 165 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AY357911.1| Triticum aestivum cultivar Sids 1 18S ribosomal RNA gene, partial sequence Length = 561 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 144 Query: 627 ccggcc 632 |||||| Sbjct: 143 ccggcc 138
>gb|AF534514.1| Uncultured Triticeae 18S ribosomal RNA gene, partial sequence Length = 117 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 26 Query: 627 ccggcc 632 |||||| Sbjct: 25 ccggcc 20
>gb|AY049040.1| Triticum aestivum 18S ribosomal RNA gene, partial sequence Length = 1805 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 656 Query: 627 ccggcc 632 |||||| Sbjct: 655 ccggcc 650
>gb|AF168852.1|AF168852 Hordeum jubatum 18S small subunit ribosomal RNA gene, complete sequence Length = 1745 Score = 131 bits (66), Expect = 3e-27 Identities = 66/66 (100%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 637 Query: 627 ccggcc 632 |||||| Sbjct: 636 ccggcc 631
>emb|AJ272181.1|TAE272181 Triticum aestivum 18S rRNA gene for 18S ribosomal RNA, strain MV-15 Length = 1764 Score = 123 bits (62), Expect = 7e-25 Identities = 65/66 (98%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 700 aggctaggagcgcgatgccggctgaagggtcgagtaggtcggtgctcgccgtgaggcgga 641 Query: 627 ccggcc 632 |||||| Sbjct: 640 ccggcc 635
>gb|AY494505.1| Uncultured eukaryote clone 1874 sample 4/01/9.2 18S ribosomal RNA gene, partial sequence Length = 510 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 82 aggctaggagcgcatcgccggctgaagggtcgagtaggtcggtgctcgccgtgaggcgga 23 Query: 627 ccggcc 632 |||||| Sbjct: 22 ccggcc 17
>gb|AY494500.1| Uncultured eukaryote clone 1869 sample 4/01/9.2 18S ribosomal RNA gene, partial sequence Length = 508 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 82 aggctaggagcgcatcgccggctgaagggtcgagtaggtcggtgctcgccgtgaggcgga 23 Query: 627 ccggcc 632 |||||| Sbjct: 22 ccggcc 17
>gb|AY494490.1| Uncultured eukaryote clone 1775 sample 4/01/9.2 18S ribosomal RNA gene, partial sequence Length = 508 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 82 aggctaggagcgcatcgccggctgaagggtcgagtaggtcggtgctcgccgtgaggcgga 23 Query: 627 ccggcc 632 |||||| Sbjct: 22 ccggcc 17
>gb|AY494420.1| Uncultured eukaryote clone b07 sample 4/01/9.2 18S ribosomal RNA gene, partial sequence Length = 508 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 82 aggctaggagcgcatcgccggctgaagggtcgagtaggtcggtgctcgccgtgaggcgga 23 Query: 627 ccggcc 632 |||||| Sbjct: 22 ccggcc 17
>gb|AY494409.1| Uncultured eukaryote clone a06 sample 4/01/9.2 18S ribosomal RNA gene, partial sequence Length = 508 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 82 aggctaggagcgcatcgccggctgaagggtcgagtaggtcggtgctcgccgtgaggcgga 23 Query: 627 ccggcc 632 |||||| Sbjct: 22 ccggcc 17
>gb|AY494406.1| Uncultured eukaryote clone a03 sample 4/01/9.2 18S ribosomal RNA gene, partial sequence Length = 508 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 82 aggctaggagcgcatcgccggctgaagggtcgagtaggtcggtgctcgccgtgaggcgga 23 Query: 627 ccggcc 632 |||||| Sbjct: 22 ccggcc 17
>gb|DQ423763.1| Uncultured eukaryote clone SAWY467 18S ribosomal RNA gene, partial sequence Length = 969 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 213 aggctaggagcgcatcgccggctgaagggtcgagttggtcggtgctcgccgtgaggcgga 154 Query: 627 ccggcc 632 |||||| Sbjct: 153 ccggcc 148
>gb|DQ423696.1| Uncultured eukaryote clone SAWY397 18S ribosomal RNA gene, partial sequence Length = 943 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 183 aggctaggagcgcatcgccggctgaagggtcgagttggtcggtgctcgccgtgaggcgga 124 Query: 627 ccggcc 632 |||||| Sbjct: 123 ccggcc 118
>gb|DQ423689.1| Uncultured eukaryote clone SAWY390 18S ribosomal RNA gene, partial sequence Length = 940 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 182 aggctaggagcgcatcgccggctgaagggtcgagttggtcggtgctcgccgtgaggcgga 123 Query: 627 ccggcc 632 |||||| Sbjct: 122 ccggcc 117
>gb|AY846367.1| Lolium multiflorum 18S ribosomal RNA, partial sequence Length = 1764 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 700 aggctaggagcgcatcgccggctgaagggtcgagttggtcggtgctcgccgtgaggcgga 641 Query: 627 ccggcc 632 |||||| Sbjct: 640 ccggcc 635
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 91.7 bits (46), Expect = 3e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28738553 gccggcagaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 28738504
>gb|AF168844.1|AF168844 Festuca rubra 18S small subunit ribosomal RNA gene, complete sequence Length = 1745 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 696 aggctaggagcgcatcgccggctgaagggtcgagttggtcggtgctcgccgtgaggcgga 637 Query: 627 ccggcc 632 |||||| Sbjct: 636 ccggcc 631
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 91.7 bits (46), Expect = 3e-15 Identities = 49/50 (98%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55126 gccggcagaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 55077
>gb|AY897976.1| Uncultured organism clone MC0508c6 small subunit ribosomal RNA gene, partial sequence Length = 1014 Score = 91.7 bits (46), Expect = 3e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgaggcgga 626 ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 81 aggctaggagcgcatcgccggctgaagggtcgagttggtcggtgctcgccgtgaggcgga 22 Query: 627 ccggcc 632 |||||| Sbjct: 21 ccggcc 16
>gb|AY494510.1| Uncultured eukaryote clone 1879 sample 4/01/9.2 18S ribosomal RNA gene, partial sequence Length = 511 Score = 85.7 bits (43), Expect = 2e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 585 cggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggc 631 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 cggctgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggc 20
>dbj|AP008225.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa109J19 Length = 30481 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 27385 gccggcagaagggtcgagcaggtcggtgctcgccgtgaggcggaccggcc 27336 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19457 gccggcagaagggtcgagcaggtcggtgctcgccgtgaggcggaccggcc 19408 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 11529 gccggcagaagggtcgagcaggtcggtgctcgccgtgaggcggaccggcc 11480 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 3601 gccggcagaagggtcgagcaggtcggtgctcgccgtgaggcggaccggcc 3552
>gb|AY120865.1| Oryza longistaminata small subunit ribosomal RNA gene, partial sequence Length = 1793 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 686 gccggcagaagggtcgagcaggtcggtgctcgccgtgaggcggaccggcc 637
>dbj|AP008245.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0013K10 Length = 129118 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 35041 gccggcagaagggtcgagcaggtcggtgctcgccgtgaggcggaccggcc 34992 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 27113 gccggcagaagggtcgagcaggtcggtgctcgccgtgaggcggaccggcc 27064 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19185 gccggcagaagggtcgagcaggtcggtgctcgccgtgaggcggaccggcc 19136 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 11257 gccggcagaagggtcgagcaggtcggtgctcgccgtgaggcggaccggcc 11208 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 3329 gccggcagaagggtcgagcaggtcggtgctcgccgtgaggcggaccggcc 3280
>dbj|AK119175.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F05, full insert sequence Length = 967 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 231 gccggcagaagggtcgagcaggtcggtgctcgccgtgaggcggaccggcc 182
>gb|AY494503.1| Uncultured eukaryote clone 1872 sample 4/01/9.2 18S ribosomal RNA gene, partial sequence Length = 508 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 595 gtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||||||||||||||||||||||||||||||||||| Sbjct: 54 gtcgagtaggtcggtgctcgccgtgaggcggaccggcc 17
>ref|XM_473881.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5496 Score = 73.8 bits (37), Expect = 6e-10 Identities = 88/105 (83%) Strand = Plus / Minus Query: 448 ctagtatctccttccgaggaacacgccgatgactactgacagcagagcgacgcccaagat 507 |||||||||| | || || || || ||||||| || |||||||| ||||| |||| ||| Sbjct: 5496 ctagtatctcttcccaagaaatacaccgatgagcacggacagcagcgcgactcccaggat 5437 Query: 508 gaacttgaaggccatgataccagagggttcccgcagttgttgctg 552 |||||| ||||||||||||||||| || || ||||||| |||||| Sbjct: 5436 gaacttaaaggccatgataccagaaggctctcgcagttcttgctg 5392
>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17, complete sequence Length = 133279 Score = 73.8 bits (37), Expect = 6e-10 Identities = 88/105 (83%) Strand = Plus / Minus Query: 448 ctagtatctccttccgaggaacacgccgatgactactgacagcagagcgacgcccaagat 507 |||||||||| | || || || || ||||||| || |||||||| ||||| |||| ||| Sbjct: 51427 ctagtatctcttcccaagaaatacaccgatgagcacggacagcagcgcgactcccaggat 51368 Query: 508 gaacttgaaggccatgataccagagggttcccgcagttgttgctg 552 |||||| ||||||||||||||||| || || ||||||| |||||| Sbjct: 51367 gaacttaaaggccatgataccagaaggctctcgcagttcttgctg 51323
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 6e-10 Identities = 88/105 (83%) Strand = Plus / Minus Query: 448 ctagtatctccttccgaggaacacgccgatgactactgacagcagagcgacgcccaagat 507 |||||||||| | || || || || ||||||| || |||||||| ||||| |||| ||| Sbjct: 31229825 ctagtatctcttcccaagaaatacaccgatgagcacggacagcagcgcgactcccaggat 31229766 Query: 508 gaacttgaaggccatgataccagagggttcccgcagttgttgctg 552 |||||| ||||||||||||||||| || || ||||||| |||||| Sbjct: 31229765 gaacttaaaggccatgataccagaaggctctcgcagttcttgctg 31229721
>dbj|AK058602.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-H09, full insert sequence Length = 888 Score = 73.8 bits (37), Expect = 6e-10 Identities = 88/105 (83%) Strand = Plus / Minus Query: 448 ctagtatctccttccgaggaacacgccgatgactactgacagcagagcgacgcccaagat 507 |||||||||| | || || || || ||||||| || |||||||| ||||| |||| ||| Sbjct: 501 ctagtatctcttcccaagaaatacaccgatgagcacggacagcagcgcgactcccaggat 442 Query: 508 gaacttgaaggccatgataccagagggttcccgcagttgttgctg 552 |||||| ||||||||||||||||| || || ||||||| |||||| Sbjct: 441 gaacttaaaggccatgataccagaaggctctcgcagttcttgctg 397
>gb|BT016702.1| Zea mays clone Contig535 mRNA sequence Length = 1200 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 690 gccggcagaagggtcgagccggtcggttctcgccgtgaggcggaccggcc 641
>gb|AY435212.1| Hevea brasiliensis 18S ribosomal RNA gene, partial sequence Length = 1695 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 705 gccggcagaagggtcgagcaggtcggtgcctgccgtgaggcggaccggcc 656
>gb|AF250048.1|AF250048 Zea mays WD-repeat protein RBAP2 (rbap2) gene, partial cds Length = 851 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 64 gccggcagaagggtcgagccggtcggttctcgccgtgaggcggaccggcc 113
>gb|AF207006.1| Restio tetraphyllus 18S ribosomal RNA gene, complete sequence Length = 1740 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||| | |||||||||||||||| |||||||||||||| Sbjct: 679 gccggcagaagggtcggggaggtcggtgctcgccgagaggcggaccggcc 630
>emb|X00755.1|OSRRN17S Rice gene for 17S ribosomal RNA Length = 1812 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 705 gccggcagaagggtcgagcaggtcggtgcctgccgtgaggcggaccggcc 656
>gb|AF069219.1|AF069219 Elegia sp. Hahn 6994 18S small subunit ribosomal RNA gene, complete sequence Length = 1753 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||| | |||||||||||||||| |||||||||||||| Sbjct: 684 gccggcagaagggtcggggaggtcggtgctcgccgagaggcggaccggcc 635
>gb|AF069218.1|AF069218 Oryza sativa 18S small subunit ribosomal RNA gene, complete sequence Length = 1754 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 685 gccggcagaagggtcgagcaggtcggtgcctgccgtgaggcggaccggcc 636
>gb|U42796.1|ZMU42796 Zea mays 18S ribosomal RNA gene, partial sequence Length = 1742 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 683 gccggcagaagggtcgagccggtcggttctcgccgtgaggcggaccggcc 634
>emb|X59455.1|AP18SR A.pratensis 18S ribosomal RNA, partial sequence Length = 247 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/55 (90%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 567 aggctaggagcgcgatgccggccgaagggtcgagtaggtcggtgctcgccgtgag 621 ||||||||||||| || |||| ||||||||||||||||||||||||||| |||| Sbjct: 214 aggctaggagcgc-atcgcggctgaagggtcgagtaggtcggtgctcgccntgag 161
>gb|AF206944.1| Juncus effusus 18S ribosomal RNA gene, complete sequence Length = 1735 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 591 aagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||| | |||||||||||||||||| Sbjct: 671 aagggtcgggtaggtcggtgcacaccgtgaggcggaccggcc 630
>gb|AF168855.1|AF168855 Joinvillea ascendens 18S small subunit ribosomal RNA gene, complete sequence Length = 1754 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||| | ||||||||||||||| |||||||||||||| Sbjct: 685 gccggcagaagggtcggggcggtcggtgctcgccgagaggcggaccggcc 636
>gb|AY103926.1| Zea mays PCO137834 mRNA sequence Length = 1818 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 467 aacacgccgatgactactgacagcagagcgacgcccaagatgaacttgaaggccatgat 525 ||||||||||| | || |||||||| || || |||| ||||||||||||||||||||| Sbjct: 1400 aacacgccgattaggacagacagcagggcaactcccaggatgaacttgaaggccatgat 1342
>gb|M35382.1|RICRGC1 Rice 17S rRNA gene Length = 145 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 594 ggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 ||||||| |||||||||| ||||||||||||||||||| Sbjct: 145 ggtcgagcaggtcggtgcctgccgtgaggcggaccggcc 107
>gb|AF206913.1| Flagellaria indica 18S ribosomal RNA gene, complete sequence Length = 1741 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| ||||||||| | ||||||||||||||| || ||||||||||| Sbjct: 681 gccggcagaagggtcggggcggtcggtgctcgccgagaagcggaccggcc 632
>dbj|AB018160.1| Candida entomophila gene for 18S rRNA, partial sequence Length = 1757 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 ||||||||||||||||||||||||| Sbjct: 669 gtgctcgccgtgaggcggaccggcc 645
>gb|AY952404.1| Cyperus alternifolius 18S ribosomal RNA gene, partial sequence Length = 1666 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 585 cggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||| ||||||||| ||||||||| | | |||||||||||||||||| Sbjct: 1031 cggcagaagggtcggataggtcggtacacaccgtgaggcggaccggcc 1078
>gb|AY572309.1| Gymnotheca involucrata 18S ribosomal RNA gene, partial sequence; chloroplast Length = 1708 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccg 629 |||||| |||||| ||||| | ||||||| | ||||||||||||||| Sbjct: 659 gccggcagaagggacgagtcgctcggtgcacaccgtgaggcggaccg 613
>gb|AY572308.1| Gymnotheca chinensis 18S ribosomal RNA gene, partial sequence; chloroplast Length = 1699 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccg 629 |||||| |||||| ||||| | ||||||| | ||||||||||||||| Sbjct: 659 gccggcagaagggacgagtcgctcggtgcacaccgtgaggcggaccg 613
>gb|AY289633.1| Heritiera littoralis 18S ribosomal RNA gene, partial sequence Length = 1670 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||||| Sbjct: 620 cggtgctcaccgtgaggcggaccggcc 594
>gb|AY289632.1| Thespesia populnea 18S ribosomal RNA gene, partial sequence Length = 1668 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||||| Sbjct: 619 cggtgctcaccgtgaggcggaccggcc 593
>gb|AY289631.1| Hibiscus tiliaceus 18S ribosomal RNA gene, partial sequence Length = 1669 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||||| Sbjct: 620 cggtgctcaccgtgaggcggaccggcc 594
>gb|DQ310309.1| Uncultured marine eukaryote clone FV36_CilH9 small subunit ribosomal RNA gene, partial sequence Length = 1332 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggacc 628 ||||||||||||||||||||||| Sbjct: 669 cggtgctcgccgtgaggcggacc 647
>gb|AY494539.1| Uncultured eukaryote clone 1517 sample 1/02/0.5 18S ribosomal RNA gene, partial sequence Length = 509 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 590 gaagggtcgagtaggtcggtgctcgccgtgaggcggacc 628 |||||||||| ||||||||| | | |||||||||||||| Sbjct: 59 gaagggtcgaataggtcggttcacaccgtgaggcggacc 21
>gb|AY494504.1| Uncultured eukaryote clone 1873 sample 4/01/9.2 18S ribosomal RNA gene, partial sequence Length = 509 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 590 gaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 ||||||||| ||||||||| | | |||||||||||||||||| Sbjct: 59 gaagggtcggataggtcggttcacaccgtgaggcggaccggcc 17
>gb|AY032646.1| Saururus cernuus 18S ribosomal RNA gene, partial sequence Length = 1559 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccg 629 |||||| |||||| ||||| | ||||||| | ||||||||||||||| Sbjct: 526 gccggcagaagggacgagtcgctcggtgcacaccgtgaggcggaccg 480
>gb|AY032644.1| Gymnotheca involucrata 18S ribosomal RNA gene, partial sequence Length = 1554 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccg 629 |||||| |||||| ||||| | ||||||| | ||||||||||||||| Sbjct: 525 gccggcagaagggacgagtcgctcggtgcacaccgtgaggcggaccg 479
>gb|AY032643.1| Gymnotheca chinensis 18S ribosomal RNA gene, partial sequence Length = 1554 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccg 629 |||||| |||||| ||||| | ||||||| | ||||||||||||||| Sbjct: 525 gccggcagaagggacgagtcgctcggtgcacaccgtgaggcggaccg 479
>gb|AF207029.1| Sterculia recordiana 18S ribosomal RNA gene, complete sequence Length = 1751 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||||| Sbjct: 657 cggtgctcaccgtgaggcggaccggcc 631
>gb|AF207009.1| Rhynchospora nervosa 18S ribosomal RNA gene, complete sequence Length = 1741 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 590 gaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 ||||||||| ||||||||| | | |||||||||||||||||| Sbjct: 673 gaagggtcggataggtcggtacacaccgtgaggcggaccggcc 631
>gb|AF206975.1| Ochroma pyramidale 18S ribosomal RNA gene, complete sequence Length = 1789 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||||| Sbjct: 661 cggtgctcaccgtgaggcggaccggcc 635
>gb|AF206921.1| Grewia occidentalis 18S ribosomal RNA gene, complete sequence Length = 1784 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||||| Sbjct: 656 cggtgctcaccgtgaggcggaccggcc 630
>emb|AJ866540.1| Uncultured eukaryote partial 18S rRNA gene, clone Passeiry1 Length = 870 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 607 ggtgctcgccgtgaggcggaccg 629 ||||||||||||||||||||||| Sbjct: 589 ggtgctcgccgtgaggcggaccg 567
>emb|AJ866539.1| Uncultured eukaryote partial 18S rRNA gene, clone Meurons3 Length = 870 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 607 ggtgctcgccgtgaggcggaccg 629 ||||||||||||||||||||||| Sbjct: 589 ggtgctcgccgtgaggcggaccg 567
>emb|AJ866535.1| Uncultured eukaryote partial 18S rRNA gene, clone Epeisses4 Length = 870 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 607 ggtgctcgccgtgaggcggaccg 629 ||||||||||||||||||||||| Sbjct: 589 ggtgctcgccgtgaggcggaccg 567
>gb|U42827.1|GHU42827 Gossypium hirsutum 18S ribosomal RNA gene, partial sequence Length = 1733 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||||| Sbjct: 651 cggtgctcaccgtgaggcggaccggcc 625
>gb|U42805.1|SCU42805 Saururus cernuus 18S ribosomal RNA gene, partial sequence Length = 1736 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccg 629 |||||| |||||| ||||| | ||||||| | ||||||||||||||| Sbjct: 680 gccggcagaagggacgagtcgctcggtgcacaccgtgaggcggaccg 634
>gb|U42507.1|BCU42507 Bombax ceiba 18S ribosomal RNA gene, partial sequence Length = 1743 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||||| Sbjct: 661 cggtgctcaccgtgaggcggaccggcc 635
>gb|AY046689.1| Uncultured eukaryote isolate A1_E022 18S ribosomal RNA gene, partial sequence Length = 1186 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccg 629 |||||||||||||||||||||| Sbjct: 101 gtgctcgccgtgaggcggaccg 80
>gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome 3, complete sequence Length = 218807 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 113 acacagagagagagatgtagatacaa 138 ||||||||||||||| |||||||||| Sbjct: 58958 acacagagagagagaagtagatacaa 58983
>emb|AL355606.14| Human DNA sequence from clone RP11-90I7 on chromosome X Contains the gene for hepatocellular carcinoma-associated antigen 127 (HCA127) (FLJ12856, FLJ12856, KIAA1166), complete sequence Length = 163283 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 72 accatatgaacaaataaagatttctg 97 |||||||||| ||||||||||||||| Sbjct: 40773 accatatgaagaaataaagatttctg 40748
>gb|AY012390.1| Hydriastele wendlandiana 18S small subunit ribosomal RNA gene, partial sequence Length = 1713 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| |||||| || | ||| |||||| | |||||||||||||||||| Sbjct: 679 gccggcagaagggacgggaaggccggtgcacaccgtgaggcggaccggcc 630
>gb|AF168845.1|AF168845 Flagellaria indica 18S small subunit ribosomal RNA gene, complete sequence Length = 1747 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 584 ccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccg 629 ||||| ||||||||| | ||||||||||| ||| ||||||||||| Sbjct: 682 ccggcagaagggtcggggcggtcggtgctctccgagaggcggaccg 637
>gb|AF530542.1| Uncultured basidiomycete clone AT9-6 18S ribosomal RNA gene, partial sequence Length = 1681 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccg 629 |||||||||||||||||||||| Sbjct: 603 gtgctcgccgtgaggcggaccg 582
>gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete sequence Length = 214016 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 113 acacagagagagagatgtagatacaa 138 ||||||||||||||| |||||||||| Sbjct: 211152 acacagagagagagaagtagatacaa 211177
>gb|AF084234.1| Diaphanoeca grandis 18S ribosomal RNA gene, partial sequence Length = 1794 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 667 gtgctcgccgtgaggcggacc 647
>gb|AY584681.1| Peltigera degenii isolate AFTOL-ID 134 18S ribosomal RNA gene, partial sequence Length = 1143 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 520 gtgctcgcggtgaggcggaccggcc 496
>gb|AY380315.1| Spathulospora antarctica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 2773 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 603 gtgcacgccgtgaggcggaccggcc 579
>gb|AY674626.1| Petalostigma pubescens 18S ribosomal RNA gene, partial sequence Length = 1676 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccgg 630 |||||||| |||||||||||||||| Sbjct: 624 cggtgctcaccgtgaggcggaccgg 600
>gb|DQ310339.1| Uncultured marine eukaryote clone FV36_CilD8D9D12 small subunit ribosomal RNA gene, partial sequence Length = 1416 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 750 gtgctcgccgtgaggcggacc 730
>gb|DQ310315.1| Uncultured marine eukaryote clone FV36_CilH12 small subunit ribosomal RNA gene, partial sequence Length = 1333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 668 gtgctcgccgtgaggcggacc 648
>gb|DQ310313.1| Uncultured marine eukaryote clone FV36_CilE11 small subunit ribosomal RNA gene, partial sequence Length = 1334 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 667 gtgctcgccgtgaggcggacc 647
>gb|DQ310312.1| Uncultured marine eukaryote clone FV36_CilG10 small subunit ribosomal RNA gene, partial sequence Length = 1333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 668 gtgctcgccgtgaggcggacc 648
>gb|DQ310306.1| Uncultured marine eukaryote clone FV36_CilF10 small subunit ribosomal RNA gene, partial sequence Length = 1334 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 669 gtgctcgccgtgaggcggacc 649
>gb|DQ310302.1| Uncultured marine eukaryote clone FV36_CilA12 small subunit ribosomal RNA gene, partial sequence Length = 1332 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 667 gtgctcgccgtgaggcggacc 647
>gb|DQ310290.1| Uncultured marine eukaryote clone FV36_CilA8 small subunit ribosomal RNA gene, partial sequence Length = 1333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 667 gtgctcgccgtgaggcggacc 647
>gb|DQ310289.1| Uncultured marine eukaryote clone FV36_CilD7 small subunit ribosomal RNA gene, partial sequence Length = 1333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 667 gtgctcgccgtgaggcggacc 647
>gb|DQ310287.1| Uncultured marine eukaryote clone FV36_CilC11 small subunit ribosomal RNA gene, partial sequence Length = 1333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 668 gtgctcgccgtgaggcggacc 648
>gb|DQ310286.1| Uncultured marine eukaryote clone FV36_CilC10 small subunit ribosomal RNA gene, partial sequence Length = 1333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 668 gtgctcgccgtgaggcggacc 648
>gb|DQ310285.1| Uncultured marine eukaryote clone FV36_CilB9 small subunit ribosomal RNA gene, partial sequence Length = 1331 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 665 gtgctcgccgtgaggcggacc 645
>gb|DQ310249.1| Uncultured marine eukaryote clone FV36_2D08 small subunit ribosomal RNA gene, partial sequence Length = 1398 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 294 gtgctcgccgtgaggcggacc 274
>gb|DQ310248.1| Uncultured marine eukaryote clone FV36_2A12 small subunit ribosomal RNA gene, partial sequence Length = 1398 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 294 gtgctcgccgtgaggcggacc 274
>gb|DQ310239.1| Uncultured marine eukaryote clone FV36_2B09 small subunit ribosomal RNA gene, partial sequence Length = 1399 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 294 gtgctcgccgtgaggcggacc 274
>gb|AY789298.1| Sarcoleotia globosa strain HMAS71956 18S small subunit ribosomal RNA gene, partial sequence Length = 1507 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 1044 gtgcacgccgtgaggcggaccggcc 1020
>gb|AY222625.1| Uncultured eukaryote clone Fe18 18S ribosomal RNA gene, partial sequence Length = 819 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 631 gtgcacgccgtgaggcggaccggcc 607
>gb|AY124370.1| Uncultured fungus small subunit ribosomal RNA gene, partial sequence Length = 759 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 95 gtgcacgccgtgaggcggaccggcc 71
>gb|AY424257.1| Sticta carolinensis clone SCAROSSU small subunit ribosomal RNA gene, partial sequence Length = 1145 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424256.1| Sticta fragilinata clone SFRAGSSU small subunit ribosomal RNA gene, partial sequence Length = 1145 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424246.1| Peltigera kristinssonii clone PKRISSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424245.1| Peltigera ponojensis clone PPONOSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424244.1| Peltigera cinnamomea clone PCINNSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424243.1| Peltigera monticola clone PMONTSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424242.1| Peltigera laciniata clone PLACISSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424241.1| Peltigera lambinonii clone PLAMBSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424240.1| Peltigera extenuata clone PEXTESSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424239.1| Peltigera rufescens clone PRUFESSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424238.1| Peltigera degenii clone PDEGESSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424237.1| Peltigera praetextata clone PPRAESSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424236.1| Peltigera membranacea clone PMEMBSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424235.1| Peltigera canina clone PCANI1SSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424234.1| Peltigera elisabethae clone PELISSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424233.1| Peltigera scabrosa clone PSCABSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424232.1| Peltigera occidentalis clone POCCISSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424231.1| Peltigera hymenina clone PHYME2SSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424230.1| Peltigera polydactylon clone PPOLYSSU small subunit ribosomal RNA gene, partial sequence Length = 1145 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 545 gtgctcgcggtgaggcggaccggcc 521
>gb|AY424229.1| Peltigera malacea clone PMALASSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424228.1| Peltigera leucophlebia clone PLEUCSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424227.1| Peltigera britannica clone PBRITSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424226.1| Peltigera venosa clone PVENOSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424225.1| Peltigera aphthosa clone PAPHTSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424224.1| Peltigera hydrothyria clone PHYDRSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424223.1| Peltigera hymenina clone PHYME1SSU small subunit ribosomal RNA gene, partial sequence Length = 1145 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 545 gtgctcgcggtgaggcggaccggcc 521
>gb|AY424222.1| Solorina crocea clone SCROCSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgctgtgaggcggaccggcc 522
>gb|AY424221.1| Peltigera continentalis clone SCONTSSU small subunit ribosomal RNA gene, partial sequence Length = 1127 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 527 gtgctcgcggtgaggcggaccggcc 503
>gb|AY424220.1| Solorina saccata clone SSACC2SSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424219.1| Solorina saccata clone SSACC1SSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424218.1| Peltigera pulverulenta clone PPULVSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424217.1| Peltigera neckeri clone PNECKSSU small subunit ribosomal RNA gene, partial sequence Length = 1144 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 544 gtgctcgcggtgaggcggaccggcc 520
>gb|AY424216.1| Peltigera polydactyloides clone PPOLSSSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424215.1| Peltigera retifoveata clone PRETI2SSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY424214.1| Peltigera retifoveata clone PRETI1SSU small subunit ribosomal RNA gene, partial sequence Length = 1146 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 546 gtgctcgcggtgaggcggaccggcc 522
>gb|AY969292.1| Uncultured ascomycete isolate dfmo4345.084 18S ribosomal RNA gene, partial sequence Length = 733 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 459 gtgcacgccgtgaggcggaccggcc 483
>gb|AY304509.1| Gymnascella hyalinospora strain ATCC 15499 18S ribosomal RNA gene, partial sequence Length = 981 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 623 gtgcacgccgtgaggcggaccggcc 599
>gb|AY304508.1| Gymnascella sp. MEXU25095 18S ribosomal RNA gene, partial sequence Length = 981 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 623 gtgcacgccgtgaggcggaccggcc 599
>emb|AM071397.1| Malva sylvestris partial 18S rRNA gene Length = 1743 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccgg 630 |||||||| |||||||||||||||| Sbjct: 662 cggtgctcaccgtgaggcggaccgg 638
>emb|AL137851.12| Human DNA sequence from clone RP11-6H18 on chromosome 9p23-24.3 Contains a novel gene and part of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 139182 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 tacacagagagagagatgtag 132 ||||||||||||||||||||| Sbjct: 3320 tacacagagagagagatgtag 3300
>gb|AY177296.1| Arachniotus ruber UAMH 3543 18S ribosomal RNA gene, partial sequence Length = 1749 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 622 gtgcacgccgtgaggcggaccggcc 598
>gb|AY177295.1| Kraurogymnocarpa trochleospora UAMH 10101 18S ribosomal RNA gene, partial sequence Length = 1710 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 583 gtgcacgccgtgaggcggaccggcc 559
>gb|AF194083.1| Microsporum langeronii 18S ribosomal RNA gene, partial sequence Length = 369 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 72 gtgcacgccgtgaggcggaccggcc 48
>gb|AF195572.1| Trichophyton soudanense 18S ribosomal RNA gene, partial sequence Length = 377 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 75 gtgcacgccgtgaggcggaccggcc 51
>gb|AY788158.1| Tetracoccus dioicus 18S ribosomal RNA gene, partial sequence Length = 1712 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccgg 630 |||||||| |||||||||||||||| Sbjct: 642 cggtgctcaccgtgaggcggaccgg 618
>gb|AY083233.1| Trichophyton mentagrophytes 18S ribosomal RNA gene, partial sequence Length = 1647 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 574 gtgcacgccgtgaggcggaccggcc 550
>gb|AY083229.1| Trichophyton tonsurans 18S ribosomal RNA gene, partial sequence Length = 1679 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 574 gtgcacgccgtgaggcggaccggcc 550
>gb|AY083228.1| Microsporum persicolor 18S ribosomal RNA gene, partial sequence Length = 1639 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 566 gtgcacgccgtgaggcggaccggcc 542
>gb|AY083227.1| Microsporum canis 18S ribosomal RNA gene, partial sequence Length = 1648 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 574 gtgcacgccgtgaggcggaccggcc 550
>gb|AY083226.1| Trichophyton mentagrophytes var. erinacei 18S ribosomal RNA gene, partial sequence Length = 1647 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 574 gtgcacgccgtgaggcggaccggcc 550
>gb|AY083225.1| Arthroderma benhamiae 18S ribosomal RNA gene, partial sequence Length = 1647 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 574 gtgcacgccgtgaggcggaccggcc 550
>gb|AY083222.1| Penicillium viridicatum strain NCPF 2592 18S ribosomal RNA gene, partial sequence Length = 1648 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 574 gtgcacgccgtgaggcggaccggcc 550
>gb|AF356682.1|AF356682 Pertusaria amara small subunit ribosomal RNA gene, partial sequence Length = 1145 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 567 gtgctcgcggtgaggcggaccggcc 543
>gb|AF356681.1|AF356681 Peltigera canina small subunit ribosomal RNA gene, partial sequence Length = 1178 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 567 gtgctcgcggtgaggcggaccggcc 543
>gb|AF206957.1| Malesherbia linearifolia 18S ribosomal RNA gene, complete sequence Length = 1739 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccgg 630 |||||||| |||||||||||||||| Sbjct: 656 cggtgctcaccgtgaggcggaccgg 632
>gb|AF206905.1| Durio zibethinus 18S ribosomal RNA gene, complete sequence Length = 1745 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccgg 630 |||||||| |||||||||||||||| Sbjct: 657 cggtgctcaccgtgaggcggaccgg 633
>gb|AF206871.1| Bomarea hirtella 18S ribosomal RNA gene, complete sequence Length = 1745 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/50 (84%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| |||||| |||| ||| ||||| | || ||||||||||||||| Sbjct: 684 gccggcagaagggacgagcaggcnggtgcacaccrtgaggcggaccggcc 635
>gb|AF206848.1| Androstachys johnsonii 18S ribosomal RNA gene, complete sequence Length = 1456 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccgg 630 |||||||| |||||||||||||||| Sbjct: 373 cggtgctcaccgtgaggcggaccgg 349
>gb|AF338189.1|AF338189 Trichophyton rubrum strain H6 18S ribosomal RNA gene, partial sequence Length = 603 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 134 gtgcacgccgtgaggcggaccggcc 110
>gb|AF338184.1|AF338184 Trichophyton rubrum strain 110 18S ribosomal RNA gene, partial sequence Length = 603 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 134 gtgcacgccgtgaggcggaccggcc 110
>gb|AF338183.1|AF338183 Trichophyton rubrum strain 07 18S ribosomal RNA gene, partial sequence Length = 603 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 134 gtgcacgccgtgaggcggaccggcc 110
>ref|XM_575436.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 9430071P14 gene (LOC500085), mRNA Length = 1592 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 505 gatgaacttgaaggccatgat 525 ||||||||||||||||||||| Sbjct: 770 gatgaacttgaaggccatgat 750
>gb|AF274104.1|AF274104 Pertusaria amara 18S ribosomal RNA gene, partial sequence Length = 1489 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 727 gtgctcgcggtgaggcggaccggcc 703
>gb|AY163429.1| Uncultured soil fungus clone Bush 4.1e 18S ribosomal RNA gene, partial sequence Length = 556 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 482 gtgctcgcggtgaggcggaccggcc 458
>dbj|D21305.1|RICAD486 Oryza sativa 17S ribosomal RNA (AD486), partial sequence Length = 320 Score = 42.1 bits (21), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cggtgctcgccgtgaggcggaccg 629 |||||||||||||||| ||||||| Sbjct: 320 cggtgctcgccgtgagncggaccg 297
>emb|AL513422.2|HS527D15 Homo sapiens chromosome 9 BAC RP11-527D15, complete sequence Length = 166169 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 tacacagagagagagatgtag 132 ||||||||||||||||||||| Sbjct: 68717 tacacagagagagagatgtag 68697
>emb|AJ315166.1|ARU315166 Arachniotus ruber partial 18S rRNA gene, strain IMI 100913 Length = 1734 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 627 gtgcacgccgtgaggcggaccggcc 603
>emb|Z34954.1|TS18SRRNX T.schoenleinii gene for 18S rRNA Length = 844 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 102 gtgcacgccgtgaggcggaccggcc 78
>emb|Z34927.1|TMB18SRRN T.mentagrophytes (var. granulosum) gene for 18S rRNA Length = 844 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 102 gtgcacgccgtgaggcggaccggcc 78
>emb|Z34926.1|TMA18SRRN T.mentagrophytes (var. erinacei) gene for 18S rRNA Length = 844 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 102 gtgcacgccgtgaggcggaccggcc 78
>emb|Z34930.1|TV18SRRN T.violaceum (var. violaceum) gene for 18S rRNA Length = 844 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 102 gtgcacgccgtgaggcggaccggcc 78
>emb|Z34925.1|MC18SRRN M.canis gene for 18S rRNA Length = 844 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 102 gtgcacgccgtgaggcggaccggcc 78
>emb|Z34924.1|MA18SRRN M.audouinii gene encoding 18S rRNA Length = 844 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 102 gtgcacgccgtgaggcggaccggcc 78
>emb|Z34923.1|EF18SRRN E.floccosum (var.floccosum) gene for 18S rRNA Length = 845 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 102 gtgcacgccgtgaggcggaccggcc 78
>emb|Z34929.1|TT18SRRN T.tonsurans gene for 18S rRNA Length = 844 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 102 gtgcacgccgtgaggcggaccggcc 78
>gb|DQ059033.1| Diaphanoeca grandis 18S small subunit ribosomal RNA gene, partial sequence Length = 1794 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 667 gtgctcgccgtgaggcggacc 647
>gb|U86693.1|STU86693 Sphinctrina turbinata 18S SSU ribosomal RNA, partial sequence Length = 1757 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 670 gtgctcgcggtgaggcggaccggcc 646
>gb|U29392.1|GPU29392 Gymnoascoideus petalosporus 18S ribosomal RNA gene, partial sequence Length = 1699 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 621 gtgcacgccgtgaggcggaccggcc 597
>gb|U29391.1|CSU29391 Ctenomyces serratus 18S ribosomal RNA gene, partial sequence Length = 1699 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 621 gtgcacgccgtgaggcggaccggcc 597
>gb|L10824.1|DPHSSRRNA Diaphanoeca grandis 16S-like small subunit ribosomal RNA Length = 1794 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggacc 628 ||||||||||||||||||||| Sbjct: 667 gtgctcgccgtgaggcggacc 647
>dbj|AB015781.1| Apinisia graminicola 18S rRNA gene, isolate CBS 721.68, partial sequence Length = 1683 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 589 gtgcacgccgtgaggcggaccggcc 565
>dbj|AB015780.1| Chrysosporium indicum 18S rRNA gene, isolate CBS 342.64, partial sequence Length = 1683 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 590 gtgcacgccgtgaggcggaccggcc 566
>dbj|AB015775.1| Rollandina hyalinospora 18S rRNA gene, isolate CBS 548.72, partial sequence Length = 1685 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 591 gtgcacgccgtgaggcggaccggcc 567
>dbj|AB015773.1| Gymnoascoideus petalosporus 18S rRNA gene, isolate CBS 252.72, partial sequence Length = 1686 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 591 gtgcacgccgtgaggcggaccggcc 567
>dbj|AB015772.1| Gymnascella aurantiaca 18S rRNA gene, isolate CBS 655.71, partial sequence Length = 1688 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 591 gtgcacgccgtgaggcggaccggcc 567
>dbj|AB015771.1| Ctenomyces serratus 18S rRNA gene, isolate CBS 187.61, partial sequence Length = 1685 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 591 gtgcacgccgtgaggcggaccggcc 567
>dbj|AB015770.1| Arthroderma incurvatum 18S rRNA gene, isolate S1477, partial sequence Length = 1686 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 591 gtgcacgccgtgaggcggaccggcc 567
>dbj|AB015769.2| Arthroderma ciferrii 18S rRNA gene, isolate CBS 272.66, partial sequence Length = 1685 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 590 gtgcacgccgtgaggcggaccggcc 566
>emb|X89218.1|PN18SRRN1 P.neopolydactyla 18S ribosomal RNA gene Length = 1567 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||||||| |||||||||||||||| Sbjct: 626 gtgctcgcggtgaggcggaccggcc 602
>emb|AJ315178.1|PLL315178 Pectinotrichum llanense partial 18S rRNA gene, strain FMR 3779 Length = 1705 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 621 gtgcacgccgtgaggcggaccggcc 597
>emb|AJ315168.1|GMA315168 Gymnascella marginospora partial 18S rRNA gene, strain CBS 393.71 Length = 1693 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 624 gtgcacgccgtgaggcggaccggcc 600
>emb|AJ315165.1|ACU315165 Arthroderma curreyi partial 18S rRNA gene, strain CBS 138.26 Length = 1697 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggcc 632 |||| |||||||||||||||||||| Sbjct: 621 gtgcacgccgtgaggcggaccggcc 597
>ref|XM_641987.1| Dictyostelium discoideum hypothetical protein (DDB0189325), partial mRNA Length = 624 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 atatgaacaaataaagattt 94 |||||||||||||||||||| Sbjct: 548 atatgaacaaataaagattt 529
>gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequence Length = 95357 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tttttacacagagagagaga 127 |||||||||||||||||||| Sbjct: 94537 tttttacacagagagagaga 94518
>gb|AY969296.1| Uncultured ascomycete isolate dfmo4345.088 18S ribosomal RNA gene, partial sequence Length = 732 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 613 cgccgtgaggcggaccggcc 632 |||||||||||||||||||| Sbjct: 463 cgccgtgaggcggaccggcc 482
>gb|AC092120.4| Homo sapiens chromosome 16 clone RP1-168P16, complete sequence Length = 113368 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 accaccaggaacctcacaagagca 444 |||||||||||||| ||||||||| Sbjct: 41204 accaccaggaacctaacaagagca 41227
>emb|CT009769.4| Mouse DNA sequence from clone RP23-44C21 on chromosome 9, complete sequence Length = 197074 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 aagcagtttttagctgttaa 398 |||||||||||||||||||| Sbjct: 105629 aagcagtttttagctgttaa 105610
>emb|CR926035.1| Pongo pygmaeus mRNA; cDNA DKFZp459A0320 (from clone DKFZp459A0320) Length = 2176 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 ttcaattgcaatccacgaaa 328 |||||||||||||||||||| Sbjct: 2109 ttcaattgcaatccacgaaa 2128
>emb|AL139326.15| Human DNA sequence from clone RP11-351K3 on chromosome 13 Contains the 3' end of the COG3 gene for component of oligomeric golgi complex 3, a novel gene (FLJ32682),a translocase of inner mitochondrial membrane 9 homolog (yeast) (TIMM9) pseudogene and a CpG island, complete sequence Length = 175588 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 taggaatgaacaaaaaccaa 219 |||||||||||||||||||| Sbjct: 9561 taggaatgaacaaaaaccaa 9542
>gb|AC158969.5| Mus musculus chromosome 1, clone RP23-264G9, complete sequence Length = 216914 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 agagatgtagatacaagctcactg 146 |||| ||||||||||||||||||| Sbjct: 39950 agagctgtagatacaagctcactg 39927
>emb|AL355933.1|NCB8B20 Neurospora crassa DNA linkage group II BAC clone B8B20 Length = 86476 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 100 agacttcctttttacacagagagagaga 127 ||||||||||||| || ||||||||||| Sbjct: 18392 agacttcctttttgcagagagagagaga 18365
>emb|AL683804.15| Mouse DNA sequence from clone RP23-17F2 on chromosome 1 Contains a SEC61 gamma subunit (Sec61g) pseudogene, a limb expression 1 homolog (chicken) (Lix1) pseudogene, a novel pseudogene, the 5' end of the gene for an ortholog of human Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 RAPH1 and a CpG island, complete sequence Length = 198631 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 agagatgtagatacaagctcactg 146 |||| ||||||||||||||||||| Sbjct: 34371 agagctgtagatacaagctcactg 34394
>gb|AF138845.1| Roccellographa cretacea 18S ribosomal RNA gene, partial sequence Length = 707 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggc 631 |||||||| ||||||||||||||| Sbjct: 565 gtgctcgcggtgaggcggaccggc 542
>gb|AC012564.21| Homo sapiens chromosome 8, clone RP11-85M22, complete sequence Length = 207682 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 92 tttctgacagacttcctttttacacaga 119 |||||| ||||||| ||||||||||||| Sbjct: 103643 tttctgccagacttgctttttacacaga 103616
>gb|U42787.1|NSU42787 Nepenthes sp. Nickrent 3056 18S ribosomal RNA gene, partial sequence Length = 1704 Score = 40.1 bits (20), Expect = 8.6 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccgg 630 |||||| |||||| |||| | ||||||||||||| |||||||||||| Sbjct: 654 gccggcagaagggacgagacgatcggtgctcgccg-gaggcggaccgg 608
>gb|AY929346.1| Lepidobotrys staudtii 18S ribosomal RNA gene, partial sequence Length = 1701 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 603 ggtcggtgctcgccgtgaggcggaccgg 630 |||||||||||||| ||||||||||||| Sbjct: 660 ggtcggtgctcgcc-tgaggcggaccgg 634
>gb|AC159302.3| Mus musculus BAC clone RP23-238C13 from chromosome 8, complete sequence Length = 183988 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 agatttctgacagacttccttttt 112 ||||||||||||||||| |||||| Sbjct: 72937 agatttctgacagactttcttttt 72914
>gb|AC159887.2| Mus musculus BAC clone RP24-249O13 from chromosome 9, complete sequence Length = 160241 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 aagcagtttttagctgttaa 398 |||||||||||||||||||| Sbjct: 148339 aagcagtttttagctgttaa 148358
>gb|AF206884.1| Chamaelirium luteum 18S ribosomal RNA gene, complete sequence Length = 1459 Score = 40.1 bits (20), Expect = 8.6 Identities = 42/50 (84%) Strand = Plus / Minus Query: 583 gccggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||||| |||||| |||| || |||| | | |||||||||||||||||| Sbjct: 398 gccggcagaagggacgagacggccggtkcacaccgtgaggcggaccggcc 349
>gb|AC005719.2|AC005719 Drosophila melanogaster, chromosome 2L, region 38A5-38B4, BAC clone BACR48M05, complete sequence Length = 188341 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tttttacacagagagagaga 127 |||||||||||||||||||| Sbjct: 63804 tttttacacagagagagaga 63823
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 caaaaaccaaattgcatgca 170 |||||||||||||||||||| Sbjct: 27481373 caaaaaccaaattgcatgca 27481354
>gb|AF168838.1|AF168838 Cyperus albostriatus 18S small subunit ribosomal RNA gene, complete sequence Length = 1702 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 585 cggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||| ||||||||| | ||||||| | | |||||||||||||||||| Sbjct: 676 cggcagaagggtcggattggtcggtacacaccgtgaggcggaccggcc 629
>gb|AY064402.1| Leishmania major SRP54-like protein gene, partial cds Length = 2469 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 502 caagatgaacttgaaggccatgat 525 |||||||||||| ||||||||||| Sbjct: 1585 caagatgaacttcaaggccatgat 1608
>gb|DQ198788.1| Doassansia hygrophilae small subunit ribosomal RNA gene, partial sequence Length = 1576 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 cgccgtgaggcggaccggcc 632 |||||||||||||||||||| Sbjct: 568 cgccgtgaggcggaccggcc 549
>emb|BX005267.7| Zebrafish DNA sequence from clone DKEY-46K2 in linkage group 19, complete sequence Length = 104035 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 catgggaagcagtttttagctgtt 396 ||||||||||||| |||||||||| Sbjct: 18226 catgggaagcagtatttagctgtt 18249
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 caaaaaccaaattgcatgca 170 |||||||||||||||||||| Sbjct: 108168 caaaaaccaaattgcatgca 108149
>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_E06 Length = 95069 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 caaaaaccaaattgcatgca 170 |||||||||||||||||||| Sbjct: 44622 caaaaaccaaattgcatgca 44603
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cacagagagagagatgtaga 133 |||||||||||||||||||| Sbjct: 687799 cacagagagagagatgtaga 687780
>gb|AC130534.5| Mus musculus BAC clone RP23-216A12 from 1, complete sequence Length = 198268 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 agagatgtagatacaagctcactg 146 |||| ||||||||||||||||||| Sbjct: 25627 agagctgtagatacaagctcactg 25604
>emb|BX936306.10| Zebrafish DNA sequence from clone DKEY-16J12 in linkage group 19, complete sequence Length = 70278 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 catgggaagcagtttttagctgtt 396 ||||||||||||| |||||||||| Sbjct: 62414 catgggaagcagtatttagctgtt 62391
>emb|AL389899.1|NCB7J19 Neurospora crassa DNA linkage group II BAC clone B7J19 Length = 57906 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 agacttcctttttacacagagagagaga 127 ||||||||||||| || ||||||||||| Sbjct: 4079 agacttcctttttgcagagagagagaga 4106
>gb|AE003664.3| Drosophila melanogaster chromosome 2L, section 73 of 83 of the complete sequence Length = 266287 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tttttacacagagagagaga 127 |||||||||||||||||||| Sbjct: 146703 tttttacacagagagagaga 146684
>gb|AF069216.1|AF069216 Carex sp. Hahn 9954 18S small subunit ribosomal RNA gene, complete sequence Length = 1702 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 585 cggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||| ||||||||| | ||||||| | | |||||||||||||||||| Sbjct: 676 cggcagaagggtcggattggtcggtacacaccgtgaggcggaccggcc 629
>gb|U42077.1|CSU42077 Cyperus sp. 18S small subunit nuclear ribosomal RNA gene Length = 1702 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 585 cggccgaagggtcgagtaggtcggtgctcgccgtgaggcggaccggcc 632 |||| ||||||||| | ||||||| | | |||||||||||||||||| Sbjct: 676 cggcagaagggtcggattggtcggtacacaccgtgaggcggaccggcc 629
>emb|AL928738.8| Mouse DNA sequence from clone RP23-76M15 on chromosome 4, complete sequence Length = 188568 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 tgacttctccctgaaagcca 300 |||||||||||||||||||| Sbjct: 135879 tgacttctccctgaaagcca 135898
>dbj|AP004716.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1987G5 Length = 189987 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 92 tttctgacagacttcctttttacacaga 119 |||||| ||||||| ||||||||||||| Sbjct: 142792 tttctgccagacttgctttttacacaga 142765
>emb|X89220.1|SC18SRRN1 S.crocea 18S ribosomal RNA gene Length = 1567 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 608 gtgctcgccgtgaggcggaccggc 631 |||||||| ||||||||||||||| Sbjct: 627 gtgctcgctgtgaggcggaccggc 604 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,730,336 Number of Sequences: 3902068 Number of extensions: 9730336 Number of successful extensions: 171073 Number of sequences better than 10.0: 235 Number of HSP's better than 10.0 without gapping: 233 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 170537 Number of HSP's gapped (non-prelim): 539 length of query: 632 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 609 effective length of database: 17,143,297,704 effective search space: 10440268301736 effective search space used: 10440268301736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
