Clone Name | rbasd20c18 |
---|---|
Clone Library Name | barley_pub |
>HA22A_ARATH (Q9S7V4) HVA22-like protein a (AtHVA22a)| Length = 177 Score = 75.1 bits (183), Expect = 1e-13 Identities = 33/58 (56%), Positives = 47/58 (81%), Gaps = 1/58 (1%) Frame = -2 Query: 523 AHVYEHFVRPMIVNQQVVNIWYIPKK-ENSDKPDDVISAAQKYIEQNGSKAFETLVNK 353 A+VYEHFVRP+ VN + +NIWY+PKK + KPDDV++AA+KYI +NG AFE ++++ Sbjct: 95 AYVYEHFVRPVFVNPRSINIWYVPKKMDIFRKPDDVLTAAEKYIAENGPDAFEKILSR 152
>HA22C_ARATH (Q9S784) HVA22-like protein c (AtHVA22c)| Length = 184 Score = 58.2 bits (139), Expect = 1e-08 Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 6/71 (8%) Frame = -2 Query: 520 HVYEHFVRPMIVNQQ--VVNIWYIPKKENSDKP----DDVISAAQKYIEQNGSKAFETLV 359 H+Y+HF+RP + Q IWY+P K+ + P DD+++AA+KY+EQ+G++AFE ++ Sbjct: 98 HIYKHFIRPFYRDPQRATTKIWYVPHKKFNFFPKRDDDDILTAAEKYMEQHGTEAFERMI 157 Query: 358 NKFKTTNARRS 326 K + RS Sbjct: 158 VKKDSYERGRS 168
>HA22B_ARATH (Q9SYX7) HVA22-like protein b (AtHVA22b)| Length = 167 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/64 (34%), Positives = 37/64 (57%) Frame = -2 Query: 523 AHVYEHFVRPMIVNQQVVNIWYIPKKENSDKPDDVISAAQKYIEQNGSKAFETLVNKFKT 344 A++YEH+VR +++ VN+WY+P K K DD+ + A K+ N S A + + Sbjct: 95 AYLYEHYVRSFLLSPHTVNVWYVPAK----KDDDLGATAGKFTPVNDSGAPQEKIVSSVD 150 Query: 343 TNAR 332 T+A+ Sbjct: 151 TSAK 154
>MSAS_PENPA (P22367) 6-methylsalicylic acid synthase (EC 2.3.1.165) (6-MSAS)| Length = 1774 Score = 35.4 bits (80), Expect = 0.096 Identities = 13/31 (41%), Positives = 23/31 (74%) Frame = +3 Query: 66 EFTPQSGLINSYIKGTEGEIIQNAGLNIVIS 158 E P +GLIN+++KGT G+++QN L + ++ Sbjct: 964 EIVPAAGLINTFLKGTGGQMLQNVVLRVPVA 994
>MTHR_MACFA (Q60HE5) Methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 656 Score = 33.1 bits (74), Expect = 0.47 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Frame = +2 Query: 221 SFPESVI-RVEEWIHIPSFQF------SFGPRSPFHLYLLQNRAPRVCSLKLVNESLKCF 379 S P+S I R +EW P+ ++ +FG ++L+ L++++PR LK+ E L Sbjct: 369 SRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPRELLLKMWGEELTSE 428 Query: 380 RSILFNVFL 406 S+ F VF+ Sbjct: 429 ESV-FEVFV 436
>MTHR_MOUSE (Q9WU20) Methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 654 Score = 30.4 bits (67), Expect = 3.1 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 7/68 (10%) Frame = +2 Query: 221 SFPESVI-RVEEWIHIPSFQF------SFGPRSPFHLYLLQNRAPRVCSLKLVNESLKCF 379 S P+S I R ++W P+ ++ +FG ++L+ L++++PR LK+ E L Sbjct: 368 SRPKSYIYRTQDWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPREELLKMWGEELTSE 427 Query: 380 RSILFNVF 403 S+ F VF Sbjct: 428 ESV-FEVF 434
>VP19_EHV1V (Q6S6P9) Capsid assembly and DNA maturation protein (Capsid protein| VP19C) Length = 465 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/64 (28%), Positives = 27/64 (42%) Frame = +3 Query: 57 DSLEFTPQSGLINSYIKGTEGEIIQNAGLNIVIS*KELAAHQVNIHCVT*CLNRRAFQNQ 236 D++ F S I+GTEG N + +EL++ + C LN R F N Sbjct: 339 DAVSFLFHKARTESAIRGTEGADAPEPHPNAALPLQELSSSRCEPRCPPSRLNNREFTNA 398 Query: 237 *FGW 248 + W Sbjct: 399 LYQW 402
>VP19_EHV1B (P28935) Capsid assembly and DNA maturation protein (Capsid protein| VP19C) Length = 465 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/64 (28%), Positives = 27/64 (42%) Frame = +3 Query: 57 DSLEFTPQSGLINSYIKGTEGEIIQNAGLNIVIS*KELAAHQVNIHCVT*CLNRRAFQNQ 236 D++ F S I+GTEG N + +EL++ + C LN R F N Sbjct: 339 DAVSFLFHKARTESAIRGTEGADAPEPHPNAALPLQELSSSRCEPRCPPSRLNNREFTNA 398 Query: 237 *FGW 248 + W Sbjct: 399 LYQW 402
>OR7C2_HUMAN (O60412) Olfactory receptor 7C2 (Olfactory receptor 19-18)| (OR19-18) Length = 320 Score = 26.6 bits (57), Expect(2) = 5.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 384 PFCSMYFCAAEITSSGLSEFSFFGIYQMFTTC 479 P C + F ++I SS L S G ++ FTTC Sbjct: 210 PLCGILFSYSQIFSSVLRVSSARGQHKAFTTC 241 Score = 21.6 bits (44), Expect(2) = 5.5 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%) Frame = +2 Query: 341 CSLKLVNESLKCFRSILFNVF-LC 409 CS +N + CF +I+ VF LC Sbjct: 189 CSDTFINNIVMCFVTIVLGVFPLC 212 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,084,868 Number of Sequences: 219361 Number of extensions: 1106051 Number of successful extensions: 2609 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2534 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2606 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)