>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL|
           receptor) (Scavenger receptor class F member 1)
          Length = 830

 Score = 33.1 bits (74), Expect = 0.42
 Identities = 21/50 (42%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = +1

Query: 226 CQHSAWG-VHHPDHGPCHSGHLCHPGRLLPHLCGPCPCQTFHHLCG-PCP 369
           C H   G    PD G C     C PG L P    PCP  TF   CG  CP
Sbjct: 310 CPHCRHGEACEPDTGHCQR---CDPGWLGPRCEDPCPTGTFGEDCGSTCP 356

>MEGF6_RAT (O88281) Multiple epidermal growth factor-like domains 6 precursor|
            (EGF-like domain-containing protein 3) (Multiple EGF-like
            domain protein 3)
          Length = 1574

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 10/61 (16%)
 Frame = +1

Query: 226  CQHSAWGVHHPDHGPCHSGHLCH---------PGRLLPHLCGPCPCQTFHHLCGP-CPCQ 375
            C    +GVH  +H  C  G  CH         PG   PH    CP   F   C   C C 
Sbjct: 1123 CVSGTFGVHCEEHCACRKGASCHHVTGACFCPPGWRGPHCEQACPRGWFGEACAQRCLCP 1182

Query: 376  T 378
            T
Sbjct: 1183 T 1183

>RPC2_DROME (P25167) DNA-directed RNA polymerase III 128 kDa polypeptide (EC|
           2.7.7.6) (RNA polymerase III subunit 2)
          Length = 1137

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 143 HPPLVKRETSEMSNISFLPGDSTSSVFMLSY 51
           H P+VK +T E++N   LP    ++V ++SY
Sbjct: 723 HAPMVKSKTIELTNFDKLPAGQNATVAVMSY 753

>MEGF6_MOUSE (Q80V70) Multiple epidermal growth factor-like domains 6 (EGF-like|
           domain-containing protein 3) (Multiple EGF-like domain
           protein 3) (Fragment)
          Length = 656

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +1

Query: 226 CQHSAWGVHHPDHGPCHSGHLCHPGRLLPHLCGPCPC 336
           C    +GVH  +H  C  G  CH      H+ G C C
Sbjct: 205 CVSGMFGVHCEEHCACRKGATCH------HVTGACLC 235

>LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor|
          Length = 3718

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
 Frame = +1

Query: 226 CQHSAWGVHHPDHGPCHSGHLCHPGRLL--PHLCGPCPCQ------TFHHLCGPCPCQ 375
           CQH   G++      C  G    P + L  PH+C PC C+      T   L G C C+
Sbjct: 401 CQHHTTGINCER---CLPGFFRAPDQPLDSPHVCRPCDCESDFTDGTCEDLTGRCYCR 455

>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)|
          Length = 1513

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +1

Query: 271 CHS---GHLCHPGRLLPHLCGPCPCQTFHHLCGPCPC 372
           CH    GHL  PG+ + + C  C C     +C   PC
Sbjct: 348 CHCKLHGHLYMPGQEITNDCEQCVCNAGRWMCKDLPC 384

>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +1

Query: 271 CHS---GHLCHPGRLLPHLCGPCPCQTFHHLCGPCPC 372
           CH    GHL  PG+ + + C  C C     +C   PC
Sbjct: 351 CHCRLHGHLYTPGQEITNDCEQCVCNAGRWVCKDLPC 387

>STC_DROME (P40798) Protein shuttle craft|
          Length = 1106

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 250 HHPDHGPCHSGHLCHPGRLLPHLCGPCPC 336
           HH     CH+G  C P +L P     CPC
Sbjct: 587 HHKCKDSCHAGS-CRPCKLSPEQITSCPC 614


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,240,643
Number of Sequences: 219361
Number of extensions: 1109243
Number of successful extensions: 3234
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3216
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)