ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein ki... 126 6e-29
2CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) 102 7e-22
3CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein ki... 73 6e-13
4CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein ki... 68 2e-11
5CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein ki... 62 1e-09
6DACF_BACSU (P38422) Penicillin-binding protein dacF precursor (D... 31 2.6
7CI076_HUMAN (Q9H9A7) Protein C9orf76 31 2.6
8CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 ... 30 5.7
9YO22_CAEEL (P34672) Hypothetical protein ZK688.2 in chromosome III 29 9.8

>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC|
           2.7.11.1) (Serine/threonine-protein kinase ATPK10)
           (SOS2-like protein kinase PKS3) (SOS-interacting protein
           2) (SNF1-related kinase 3.1)
          Length = 421

 Score =  126 bits (316), Expect = 6e-29
 Identities = 70/160 (43%), Positives = 103/160 (64%)
 Frame = -1

Query: 619 VKERLPNENTTTDAVPTLGVRRRKNSHEVRKPLAVTNLNAFEIISFSTGFDLSGLFIEKE 440
           VKE +  E T  DA          N+   ++     NLNAFEIIS STGFDLSGLF + E
Sbjct: 274 VKESV-EEETEVDA------EAEGNASAEKEKKRCINLNAFEIISLSTGFDLSGLFEKGE 326

Query: 439 SKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFE 260
            K+E RFTS + AS I  KL ++ K L ++VRKK++   + +V+      V+  ++E+FE
Sbjct: 327 EKEEMRFTSNREASEITEKLVEIGKDLKMKVRKKEH---EWRVKMSAEATVV--EAEVFE 381

Query: 259 ISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDIIWAWH 140
           I+PSYH++ +K++ GD+ EY+++++E IRPAL D + AWH
Sbjct: 382 IAPSYHMVVLKKSGGDTAEYKRVMKESIRPALIDFVLAWH 421



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>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)|
          Length = 449

 Score =  102 bits (255), Expect = 7e-22
 Identities = 52/127 (40%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
 Frame = -1

Query: 514 TNLNAFEIISFSTGFDLSGLF-IEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKK 338
           T++NAFE+IS +   +L  LF  +KE K+E RFTS+ P   I++K+E+ AK L   ++KK
Sbjct: 316 TSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLGFDIQKK 375

Query: 337 DNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKD 158
            N  ++M+  K GR G L   +E+F+++PS H++E+K+  GD+LE+QK     +   LKD
Sbjct: 376 -NYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRT-LSTQLKD 433

Query: 157 IIWAWHG 137
           ++W   G
Sbjct: 434 VVWKCDG 440



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>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related
           kinase 3.16)
          Length = 444

 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
 Frame = -1

Query: 514 TNLNAFEIISFSTGFDLSGLFIEKE-SKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKK 338
           T +NAF++I  S+  DLSG F ++  S++  RFTS   A  ++ K+E    ++   V+KK
Sbjct: 316 TIINAFQLIGMSSFLDLSGFFEQENVSERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKK 375

Query: 337 DNGVVKMQVRKEGRNGV----LQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRP 170
                K++V++E RN      L   +E+FEI PS +++E++++ GDS  Y++L E     
Sbjct: 376 H---AKLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQLYER---- 428

Query: 169 ALKDI 155
            LKD+
Sbjct: 429 LLKDV 433



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>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC|
           2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY
           SENSITIVE 2 protein)
          Length = 446

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 37/122 (30%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
 Frame = -1

Query: 508 LNAFEIISFSTGFDLSGLFIEKES--KKEARFTSEQPASAIVSKLEDVAKQLNLRVRKKD 335
           +NAFE+I+ S G +LS LF  ++   K++ RF S +  S I++ +E VA  +  +   + 
Sbjct: 310 MNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTR- 368

Query: 334 NGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDI 155
           N   +++     + G L    EI+E++PS  ++++++ +G++LEY K  ++ +   L++I
Sbjct: 369 NFKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFYKK-LCSKLENI 427

Query: 154 IW 149
           IW
Sbjct: 428 IW 429



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>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS5)
           (SOS-interacting protein 4) (SNF1-related kinase 3.22)
          Length = 435

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
 Frame = -1

Query: 520 AVTNLNAFEIISFSTGFDLSGLF--IEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRV 347
           AV +LNAF++IS+S+G DLSGLF      S +  RF SE+    +  ++E  A++ NLR+
Sbjct: 303 AVKSLNAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFAREENLRM 362

Query: 346 RKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPA 167
           +KK       ++  EG+NG       I  ++    ++E ++  GD   Y+++    +R  
Sbjct: 363 KKKKEEEYGFEM--EGQNGKFGIGICISRLNDLLVVVEARRRGGDGDCYKEMWNGKLRVQ 420

Query: 166 L 164
           L
Sbjct: 421 L 421



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>DACF_BACSU (P38422) Penicillin-binding protein dacF precursor|
           (D-alanyl-D-alanine carboxypeptidase) (EC 3.4.16.4)
           (DD-peptidase) (DD-carboxypeptidase)
          Length = 389

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 21/76 (27%), Positives = 37/76 (48%)
 Frame = -1

Query: 451 IEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDS 272
           ++K  +K    T+ +P S +  K ED+   +   ++ KDN    +Q  +E    VL+ D 
Sbjct: 297 VKKGKQKFIELTTSEPISILTKKGEDM-NDVKKEIKMKDNISAPIQKGQELGTLVLKKDG 355

Query: 271 EIFEISPSYHLIEMKQ 224
           E+   SP     +MK+
Sbjct: 356 EVLAESPVAAKEDMKK 371



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>CI076_HUMAN (Q9H9A7) Protein C9orf76|
          Length = 625

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -1

Query: 286 LQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDII 152
           + F  EI      + + EMKQ+  D L+YQK L EG++   +D+I
Sbjct: 543 VDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFL-EGLQKCQRDLI 586



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>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal
            proliferator-activated receptor A-interacting complex 320
            kDa protein) (PPAR-alpha-interacting complex protein 320
            kDa)
          Length = 2885

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = -1

Query: 412  EQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIE 233
            E   SA +SK++   ++    V+ KD G +K+  +K+G      FD E   +    +L  
Sbjct: 2325 EHEQSAQMSKVKKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRPFDGEDGALGQQQYLTR 2384

Query: 232  MKQTSGDS 209
            +++    S
Sbjct: 2385 LRELQSTS 2392



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>YO22_CAEEL (P34672) Hypothetical protein ZK688.2 in chromosome III|
          Length = 632

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = -1

Query: 409 QPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDSE 269
           QPA  +V +  +   QL   V++ +    + ++R+EG NG  + D++
Sbjct: 545 QPAITLVERFNEATGQLETEVKRDEKKKKEEELREEGDNGKEEKDNK 591


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,932,507
Number of Sequences: 219361
Number of extensions: 1883407
Number of successful extensions: 5022
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5015
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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