Clone Name | rbasd20b19 |
---|---|
Clone Library Name | barley_pub |
>IF6_HUMAN (P56537) Eukaryotic translation initiation factor 6 (eIF-6) (B4| integrin interactor) (CAB) (p27(BBP)) (B(2)GCN homolog) Length = 245 Score = 262 bits (669), Expect = 8e-70 Identities = 127/168 (75%), Positives = 145/168 (86%) Frame = -1 Query: 638 TTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGV 459 TTDQELQH+RN +PD V ++R++ERLSALGN +CND+VAL HPDLD+ TEE++ADVL V Sbjct: 76 TTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKV 135 Query: 458 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 279 EVFRQT+A +LVGSYC FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAA Sbjct: 136 EVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAA 195 Query: 278 GMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLIDS 135 GM VNDW AFCG DTT+TELSV+ESVFKL E QP+ I MR SLIDS Sbjct: 196 GMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSLIDS 243
>IF6_MOUSE (O55135) Eukaryotic translation initiation factor 6 (eIF-6) (B4| integrin interactor) (CAB) (p27(BBP)) Length = 245 Score = 261 bits (666), Expect = 2e-69 Identities = 126/168 (75%), Positives = 145/168 (86%) Frame = -1 Query: 638 TTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGV 459 TTDQELQH+RN +PD V ++R++ERLSALGN +CND+VAL HPDLD+ TEE++ADVL V Sbjct: 76 TTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKV 135 Query: 458 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 279 EVFRQT+A +LVGSYC FSN+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAA Sbjct: 136 EVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTVNRGSEVIAA 195 Query: 278 GMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLIDS 135 GM VNDW AFCG DTT+TELSV+ESVFKL E +P+ I MR SLIDS Sbjct: 196 GMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDS 243
>IF6_YEAST (Q12522) Eukaryotic translation initiation factor 6 (eIF-6)| Length = 245 Score = 252 bits (644), Expect = 6e-67 Identities = 121/171 (70%), Positives = 148/171 (86%) Frame = -1 Query: 644 TQTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVL 465 TQTTDQELQHLRN +PD V +QR++ERLSALGN I CND+VAL HPD+D+ TEELI+DVL Sbjct: 74 TQTTDQELQHLRNSLPDSVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVL 133 Query: 464 GVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 285 GVEVFRQTI+GNILVGSYC+ SN+GGLVHP TS++D +ELS+LLQVPLVAGTVNRGS V+ Sbjct: 134 GVEVFRQTISGNILVGSYCSLSNQGGLVHPQTSVQDQEELSSLLQVPLVAGTVNRGSSVV 193 Query: 284 AAGMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLIDSY 132 AGM VND+ A G DTTA ELSVIES+F+L++ QP +I ++R +LI++Y Sbjct: 194 GAGMVVNDYLAVTGLDTTAPELSVIESIFRLQDAQPESISGNLRDTLIETY 244
>IF6_SCHPO (O94476) Eukaryotic translation initiation factor 6 (eIF-6)| Length = 244 Score = 249 bits (635), Expect = 7e-66 Identities = 117/171 (68%), Positives = 147/171 (85%) Frame = -1 Query: 644 TQTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVL 465 + TTD ELQHLRN +PD V +QR+DERLSALGN ++CND+VAL HPD+++ TEE+IADVL Sbjct: 74 SSTTDNELQHLRNSLPDPVKIQRVDERLSALGNIVACNDYVALVHPDIERETEEIIADVL 133 Query: 464 GVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 285 VEVFRQT+AGN+L GSYCA SN+G LVHP TSI++ DELS+LLQVPLVAGT+NRGS+VI Sbjct: 134 DVEVFRQTVAGNVLTGSYCALSNQGALVHPRTSIQEQDELSSLLQVPLVAGTINRGSDVI 193 Query: 284 AAGMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLIDSY 132 AG+ VNDW AF G DTTATEL+V ES+FKL++ QP+AI+ + R +L++SY Sbjct: 194 GAGLVVNDWCAFAGLDTTATELAVCESIFKLQDAQPSAIISN-RDTLVESY 243
>IF6_ARATH (O22290) Eukaryotic translation initiation factor 6 (eIF-6)| Length = 247 Score = 247 bits (631), Expect = 2e-65 Identities = 117/169 (69%), Positives = 147/169 (86%) Frame = -1 Query: 635 TDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVE 456 TDQELQHLR+ +PD+VVVQRI+E + ALGN I+CND+VAL HP L+K TEE+I+DVLGVE Sbjct: 79 TDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVHPKLEKDTEEIISDVLGVE 138 Query: 455 VFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAG 276 V+RQTIA N LVGSYC+ SN GG+VH +T++E++ EL+ L+QVPLVAGTVNRGS+VI+AG Sbjct: 139 VYRQTIANNELVGSYCSLSNNGGMVHSNTNVEEMVELANLVQVPLVAGTVNRGSQVISAG 198 Query: 275 MTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLIDSYV 129 +TVNDWTAFCGSDTTA ELSV+ ++FKL + QP + +MRKSLID+YV Sbjct: 199 LTVNDWTAFCGSDTTAVELSVVNNIFKLVQSQPDFVGSEMRKSLIDTYV 247
>IF6_DROME (P56538) Probable eukaryotic translation initiation factor 6| (eIF-6) Length = 245 Score = 243 bits (621), Expect = 3e-64 Identities = 119/167 (71%), Positives = 140/167 (83%) Frame = -1 Query: 638 TTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGV 459 TTD+ELQHLRN +PD V + R++ERLSALGN I+CND+VAL HPDLDK TEE+IADVL V Sbjct: 76 TTDEELQHLRNSLPDAVKIYRVEERLSALGNVIACNDYVALVHPDLDKETEEIIADVLKV 135 Query: 458 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 279 EVFRQTIA N LVGSY SN+GG+VHP TSI+D DELS+LLQVPLVAGTVNRGSEV+AA Sbjct: 136 EVFRQTIADNSLVGSYAVLSNQGGMVHPKTSIQDQDELSSLLQVPLVAGTVNRGSEVLAA 195 Query: 278 GMTVNDWTAFCGSDTTATELSVIESVFKLREGQPTAIVDDMRKSLID 138 GM VNDW +F G +TTATE+SVIESVFKL + QP + +R +LI+ Sbjct: 196 GMVVNDWLSFVGMNTTATEISVIESVFKLNQAQPATVTTKLRAALIE 242
>IF6_BETVU (O81920) Eukaryotic translation initiation factor 6 (eIF-6)| (Fragment) Length = 193 Score = 217 bits (552), Expect = 3e-56 Identities = 108/121 (89%), Positives = 115/121 (95%) Frame = -1 Query: 647 HTQTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADV 468 HT TTDQELQHLRNC+PD VVVQRI+E+LSALGNCI+CND+VALTH DLDK TEELIADV Sbjct: 74 HT-TTDQELQHLRNCLPDSVVVQRIEEKLSALGNCIACNDYVALTHTDLDKETEELIADV 132 Query: 467 LGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEV 288 LGVEVF QTIAGNILVGSYCA +N+GGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEV Sbjct: 133 LGVEVFGQTIAGNILVGSYCAITNKGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEV 192 Query: 287 I 285 I Sbjct: 193 I 193
>IF6_CAEEL (O62106) Eukaryotic translation initiation factor 6 (eIF-6)| Length = 246 Score = 208 bits (529), Expect = 1e-53 Identities = 102/169 (60%), Positives = 131/169 (77%), Gaps = 1/169 (0%) Frame = -1 Query: 638 TTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGV 459 TTDQELQHLRN +PD+V ++R+DERLSALGN I+CNDHVA+ H ++ TE+ + +VL V Sbjct: 76 TTDQELQHLRNSLPDEVAIRRVDERLSALGNVIACNDHVAIVHAEISAETEQALVEVLKV 135 Query: 458 EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAA 279 EVFR ++A N LVGSYC S+ G LV T E E++ LLQ+P+VAGT NRGSE+I A Sbjct: 136 EVFRVSLAQNSLVGSYCILSSNGCLVAARTPPETQREIAALLQIPVVAGTCNRGSELIGA 195 Query: 278 GMTVNDWTAFCGSDTTATELSVIESVFKLRE-GQPTAIVDDMRKSLIDS 135 GM VNDW AFCG D+T+TELSV+ES+FKL E G PT+I + +R +LI+S Sbjct: 196 GMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTLIES 244
>IF6_TRYCR (Q9XYP3) Eukaryotic translation initiation factor 6 (eIF-6)| (Fragment) Length = 114 Score = 120 bits (300), Expect = 5e-27 Identities = 55/108 (50%), Positives = 80/108 (74%), Gaps = 3/108 (2%) Frame = -1 Query: 452 FRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGM 273 FR +IA N LVGSY +N+G +VHP T +D+DE+++LLQVP+VAGT+NRG+ I +G+ Sbjct: 4 FRTSIAENALVGSYAVVNNKGCMVHPKTPAQDMDEIASLLQVPVVAGTINRGNAAIGSGL 63 Query: 272 TVNDWTAFCGSDTTATELSVIESVFKLRE---GQPTAIVDDMRKSLID 138 VNDW AFCG +TTATE++V+E +F+LR G ++ +R +L+D Sbjct: 64 VVNDWAAFCGLNTTATEITVVERIFQLRRDLGGGRANLLQQLRDTLVD 111
>IF6_AERPE (Q9YD27) Translation initiation factor 6 (aIF-6)| Length = 233 Score = 108 bits (269), Expect = 2e-23 Identities = 58/142 (40%), Positives = 83/142 (58%) Frame = -1 Query: 632 DQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVEV 453 D+E++ +R + + V V + R +ALGN I CND L P L+K + ++D LGVEV Sbjct: 85 DREVELVRKAL-EGVEVGIVPTRSNALGNVIVCNDRACLASPGLEKEALKTVSDTLGVEV 143 Query: 452 FRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGM 273 ++AG VGS +NRGGL HP S E+L LS + +VP AGT+N G E + G+ Sbjct: 144 VEGSVAGVYTVGSAIVVTNRGGLAHPDASEEELKFLSDVFKVPFEAGTINFGVEFVRTGL 203 Query: 272 TVNDWTAFCGSDTTATELSVIE 207 N + A G DTT E++ I+ Sbjct: 204 VANSYGALVGEDTTGPEIARIQ 225
>IF6_METKA (Q8TUY5) Translation initiation factor 6 (aIF-6)| Length = 221 Score = 97.8 bits (242), Expect = 2e-20 Identities = 53/133 (39%), Positives = 76/133 (57%) Frame = -1 Query: 590 VVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSY 411 V V + +++A+GN + NDH AL HPDLD E+I VLG V R + G VGS Sbjct: 88 VEVDVLPSKMNAVGNLVLTNDHGALVHPDLDDHALEVIESVLGGRVVRGELGGVKTVGSA 147 Query: 410 CAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTT 231 +++G +VHP + E+++ +S +L V + GTVNRGS + G+ VN A G DTT Sbjct: 148 GVANSKGAVVHPGATEEEMERVSEVLGVDVEVGTVNRGSPYVGVGIVVNSKGAVVGEDTT 207 Query: 230 ATELSVIESVFKL 192 EL+ +E L Sbjct: 208 GPELARLEDALYL 220 Score = 44.3 bits (103), Expect = 3e-04 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 1/119 (0%) Frame = -1 Query: 554 LGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHP 375 +G I+ ++ A+ P + E + + L VEV R T+AG+ LVG+ A ++ G L Sbjct: 14 IGAWIAASEEYAVVAPKVPDDIVERVKEALDVEVVRTTVAGSNLVGALLAVNSNGALFPR 73 Query: 374 HTSIEDLDELSTL-LQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESV 201 H ++ + L ++V ++ +N ++ ND A D L VIESV Sbjct: 74 HAREHEIRVVRELGVEVDVLPSKMNAVGNLV----LTNDHGALVHPDLDDHALEVIESV 128
>IF6_PYRAE (Q8ZTU1) Translation initiation factor 6 (aIF-6)| Length = 220 Score = 93.2 bits (230), Expect = 6e-19 Identities = 52/128 (40%), Positives = 75/128 (58%) Frame = -1 Query: 584 VQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCA 405 V I+ + +A+ N I + VAL P L+ + +++ADVLGVEV TIAGN LVG+ Sbjct: 91 VDIINTKYTAISNLILAGNKVALVSPLLEPSARKVVADVLGVEVIVDTIAGNPLVGALAV 150 Query: 404 FSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTAT 225 ++RG LV P + +DL +LS +V + GTVNRG + G+ VND A G +T Sbjct: 151 LNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGKSFLRGGIVVNDNGALVGDETAGP 210 Query: 224 ELSVIESV 201 EL ++ V Sbjct: 211 ELMRMQQV 218 Score = 36.2 bits (82), Expect = 0.088 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 1/99 (1%) Frame = -1 Query: 560 SALGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLV 381 S++G I+ N+ V PD+ + ++ + + L V R T+A + L+G + ++ G L+ Sbjct: 13 SSIGVFIATNNTVTFIPPDVPEKIDDAVRNTLRTSVARFTVARSPLLGIFTVVNDNGVLL 72 Query: 380 HPHTSIEDLDELSTL-LQVPLVAGTVNRGSEVIAAGMTV 267 P E++ L L V ++ S +I AG V Sbjct: 73 PPLVLEEEVRLFKALGLNVDIINTKYTAISNLILAGNKV 111
>IF6_METMA (Q8PYQ3) Translation initiation factor 6 (aIF-6)| Length = 219 Score = 92.8 bits (229), Expect = 8e-19 Identities = 49/130 (37%), Positives = 73/130 (56%) Frame = -1 Query: 575 IDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSN 396 + +RL+A+GN + ND AL HP+L E+IA L VEV+R TIAG VG +N Sbjct: 90 LPDRLNAVGNIVLANDSAALVHPELSDRALEIIARTLKVEVYRGTIAGIKNVGMAGVVTN 149 Query: 395 RGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELS 216 +G LVHP ++ + + L + +P+ GT N G++++ +G+ N GS+TT EL Sbjct: 150 KGLLVHPKVTVSEREALEEIFGLPVNIGTTNFGTQMLGSGLLANSKNFVAGSETTGPELG 209 Query: 215 VIESVFKLRE 186 IE E Sbjct: 210 RIEEALGFLE 219
>IF6_SULSO (Q980G0) Translation initiation factor 6 (aIF-6)| Length = 223 Score = 90.9 bits (224), Expect = 3e-18 Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 1/145 (0%) Frame = -1 Query: 638 TTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGV 459 T D E + L+ + D V+ ++ +++ALGN I N+ AL +P+ + E++I + LGV Sbjct: 75 TIDDEFRFLKENLRD-CRVEILNSKVTALGNTILANNKAALIYPEFNDIEEKIIKETLGV 133 Query: 458 E-VFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIA 282 E + R IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I Sbjct: 134 EDIKRGKIAQMITVGSVGVITNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIK 193 Query: 281 AGMTVNDWTAFCGSDTTATELSVIE 207 +G+ ND G+ TT E+ I+ Sbjct: 194 SGLVANDKGTLVGASTTGPEILRIQ 218
>IF6_METAC (Q8TIN4) Translation initiation factor 6 (aIF-6)| Length = 218 Score = 89.4 bits (220), Expect = 9e-18 Identities = 49/130 (37%), Positives = 70/130 (53%) Frame = -1 Query: 575 IDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSN 396 + +RL+A+GN + ND AL HPDL E IA L V+V+R TIAG VG +N Sbjct: 89 LPDRLNAVGNIVFANDSAALVHPDLSDKALEAIARTLKVDVYRGTIAGIKNVGMAGVVTN 148 Query: 395 RGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELS 216 +G LVHP + + + L + P+ GT N G++++ +G+ N GS+TT EL Sbjct: 149 KGLLVHPKVTASEREVLEKIFGFPVNIGTTNFGTQMLGSGLLANSKNFVAGSETTGPELG 208 Query: 215 VIESVFKLRE 186 IE E Sbjct: 209 RIEEALGFLE 218
>IF6_PYRFU (Q8U3S8) Translation initiation factor 6 (aIF-6)| Length = 227 Score = 87.8 bits (216), Expect = 3e-17 Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 3/145 (2%) Frame = -1 Query: 632 DQELQHLRNCIPDQVV---VQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLG 462 D EL+ ++N + + V + +ALGN I ND AL + + I D+LG Sbjct: 77 DSELEKIKNAFREYGIDTEVVPFQTKYTALGNLILTNDKGALVSSKFSREEAKKIGDILG 136 Query: 461 VEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIA 282 VEV R IAG + VGS +N+GGLVHP + E+L+ LS L +V + GT N G + Sbjct: 137 VEVERGVIAGIVAVGSAGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPYVG 196 Query: 281 AGMTVNDWTAFCGSDTTATELSVIE 207 + M N + G TT E+ IE Sbjct: 197 SCMLANSYGVVVGHLTTGPEIVKIE 221
>IF6_METTH (O27648) Translation initiation factor 6 (aIF-6)| Length = 222 Score = 84.7 bits (208), Expect = 2e-16 Identities = 56/153 (36%), Positives = 78/153 (50%) Frame = -1 Query: 641 QTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLG 462 Q D+E+ L + V RI ER +A+GN + ND+ A+ P L ++I DVL Sbjct: 73 QAMDREIDALAAAGVEAV---RIPERFTAVGNLVLANDNGAVASPLLSDDALQVIGDVLE 129 Query: 461 VEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIA 282 V+V T+AG +VGS A +NRG L++P S E++ + L V GTVN G +I Sbjct: 130 VDVKVSTLAGLNIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVNHGVTLIG 189 Query: 281 AGMTVNDWTAFCGSDTTATELSVIESVFKLREG 183 A N G +TT EL+ IE EG Sbjct: 190 ACSVANSNGVLVGEETTGPELARIEEALGFLEG 222 Score = 33.9 bits (76), Expect = 0.43 Identities = 21/71 (29%), Positives = 37/71 (52%) Frame = -1 Query: 554 LGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHP 375 LG IS D VAL + + E ++ + L VEV + +I+G+ L G+ ++ G +V Sbjct: 13 LGVYISVTDSVALIPQNTPEKFEGVLREALEVEVLKVSISGSSLNGALAVGNSNGFVVSN 72 Query: 374 HTSIEDLDELS 342 ++D L+ Sbjct: 73 QAMDREIDALA 83
>IF6_PYRHO (O58264) Translation initiation factor 6 (aIF-6)| Length = 227 Score = 83.2 bits (204), Expect = 6e-16 Identities = 51/145 (35%), Positives = 73/145 (50%), Gaps = 3/145 (2%) Frame = -1 Query: 632 DQELQHLRNCIPDQVVVQRI---DERLSALGNCISCNDHVALTHPDLDKATEELIADVLG 462 D E++ ++ + + + + + +ALGN I ND AL + + I ++LG Sbjct: 77 DAEIERIKKALSEYGIDMEVVPFRSKYTALGNLILTNDKAALVSAKFSRKEAQEIGEILG 136 Query: 461 VEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIA 282 VEV R IAG VGS +N+GGLVHP TS E+L+ LS L +V + GT N G + Sbjct: 137 VEVERGVIAGLHAVGSAGVVTNKGGLVHPETSDEELEWLSDLFKVDVYVGTANMGVPYVG 196 Query: 281 AGMTVNDWTAFCGSDTTATELSVIE 207 M N G TT E+ IE Sbjct: 197 TCMLANSNGVVVGHLTTGPEIVKIE 221
>IF6_THEAC (Q9HM16) Translation initiation factor 6 (aIF-6)| Length = 216 Score = 82.8 bits (203), Expect = 8e-16 Identities = 44/128 (34%), Positives = 70/128 (54%) Frame = -1 Query: 584 VQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCA 405 V ++ ++++A+GN I NDH A+ H + + + I D LGVE R TI + VGS Sbjct: 87 VLQLKDKINAIGNDIIANDHGAIIHKNFSNRSRKEIEDTLGVETIRTTIGNILTVGSAGI 146 Query: 404 FSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTAT 225 +++G LV+P T ++L+ L +V + +GT N GS + A + N G DTT Sbjct: 147 LTSKGMLVNPETDDDELEFLRDFFKVSVKSGTANFGSIYVGASIVANSKGVLVGKDTTPI 206 Query: 224 ELSVIESV 201 E+ I+ V Sbjct: 207 EMDRIDDV 214
>IF6_PYRAB (Q9UYI6) Translation initiation factor 6 (aIF-6)| Length = 227 Score = 82.0 bits (201), Expect = 1e-15 Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 3/150 (2%) Frame = -1 Query: 632 DQELQHLRNCIPDQVVVQRI---DERLSALGNCISCNDHVALTHPDLDKATEELIADVLG 462 D E++ +++ + + I + +ALGN I ND AL + + I D+LG Sbjct: 77 DTEIERIKSAFKEYGIETEIVPFRTKYTALGNLILTNDKAALVSAKFSRDEAKEIGDILG 136 Query: 461 VEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIA 282 VEV R IAG VGS +N+GGLVHP S E+L+ LS L +V + GT N G + Sbjct: 137 VEVERGLIAGLHAVGSAGVVTNKGGLVHPEASDEELEWLSELFKVDVYVGTANMGVPYVG 196 Query: 281 AGMTVNDWTAFCGSDTTATELSVIESVFKL 192 M N G TT E+ IE L Sbjct: 197 TCMLANSNGVVVGHLTTGPEIVKIEEALGL 226
>IF6_SULTO (Q971I4) Translation initiation factor 6 (aIF-6)| Length = 223 Score = 81.3 bits (199), Expect = 2e-15 Identities = 53/146 (36%), Positives = 84/146 (57%), Gaps = 1/146 (0%) Frame = -1 Query: 632 DQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVE- 456 D+E++ +++ D V V+ +D R +ALGN I N + AL +P+L + I + L ++ Sbjct: 77 DEEVKKIKDIARD-VRVEILDIRPTALGNIILTNSYGALIYPELSSIEFKKIKESLQIDN 135 Query: 455 VFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAG 276 + + +IA I VGS +++ GLVH T+ E+LD+LS L +V + GTVN GS I +G Sbjct: 136 IEKGSIANIITVGSVGVITDKAGLVHIDTTEEELDKLSKLFRVKIDTGTVNFGSAFIHSG 195 Query: 275 MTVNDWTAFCGSDTTATELSVIESVF 198 + N GS TT E+ I+ F Sbjct: 196 LIANRNGVLVGSATTGPEILRIQRAF 221 Score = 31.6 bits (70), Expect = 2.2 Identities = 18/73 (24%), Positives = 36/73 (49%) Frame = -1 Query: 554 LGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHP 375 +G I ND + +LD T + I + E+ + TIA + L+G + A +N L+ Sbjct: 14 IGIYIFTNDKYTIVPKNLDVETIQKIQETFKTEIIQTTIAKSFLIGIFVAGNNNVILLPR 73 Query: 374 HTSIEDLDELSTL 336 + E++ ++ + Sbjct: 74 NVDDEEVKKIKDI 86
>IF6_SULAC (P38619) Translation initiation factor 6 (aIF-6)| Length = 223 Score = 80.5 bits (197), Expect = 4e-15 Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 1/132 (0%) Frame = -1 Query: 590 VVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVEV-FRQTIAGNILVGS 414 V V+ +D R +ALGN I N H AL + DL +A + L ++ + TIA I VGS Sbjct: 90 VRVEVVDIRPTALGNIILSNTHGALIYQDLSEAEINKVKKALQIDTAIKGTIANIITVGS 149 Query: 413 YCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDT 234 +++ GLVH + E+L +LS L +V L +GTVN GS I +G+ N GS T Sbjct: 150 VAVITDKAGLVHIDATEEELKKLSELFKVKLDSGTVNFGSVFIRSGLVANRNGVLVGSST 209 Query: 233 TATELSVIESVF 198 T E+ I+ F Sbjct: 210 TGAEILRIQRAF 221
>IF6_PYRKO (Q5JGT4) Translation initiation factor 6 (aIF-6)| Length = 229 Score = 79.3 bits (194), Expect = 9e-15 Identities = 52/146 (35%), Positives = 73/146 (50%), Gaps = 4/146 (2%) Frame = -1 Query: 632 DQELQHLRNCIPD---QVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLG 462 D EL+ ++ + + + V RL+ALGN I ND AL + + I ++LG Sbjct: 77 DAELERIKTALNEFGIDMDVVPFKSRLTALGNLILTNDKAALVSKEFTREEANAIGEILG 136 Query: 461 V-EVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVI 285 V EV R IA VGS +N+GGLVHP + E+L+ LS L V + GT N G + Sbjct: 137 VDEVERGMIASYRSVGSVGVVTNKGGLVHPEATDEELEWLSDLFGVDIYVGTANMGVPFV 196 Query: 284 AAGMTVNDWTAFCGSDTTATELSVIE 207 + M N + G TT E+ IE Sbjct: 197 GSCMLANSYGVVVGHLTTGPEIVKIE 222
>IF6_THEVO (Q97CU0) Translation initiation factor 6 (aIF-6)| Length = 218 Score = 79.0 bits (193), Expect = 1e-14 Identities = 42/125 (33%), Positives = 66/125 (52%) Frame = -1 Query: 575 IDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSN 396 + ++++A+GN I NDH A+ H + I D LGVE R +I + VGS ++ Sbjct: 92 LKDKINAVGNDIIANDHGAIIHKAFSNKARKEIEDTLGVETIRTSIGNILTVGSASVLTS 151 Query: 395 RGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELS 216 +G LV+P T ++L+ L +V + +GT N GS + A + N G DTT E+ Sbjct: 152 KGMLVNPETDDDELEFLKDFFKVSVKSGTANFGSIYVGASIVANSKGILVGRDTTPIEID 211 Query: 215 VIESV 201 I+ V Sbjct: 212 RIDDV 216
>IF6_ARCFU (O28214) Translation initiation factor 6 (aIF-6)| Length = 215 Score = 78.2 bits (191), Expect = 2e-14 Identities = 41/145 (28%), Positives = 76/145 (52%) Frame = -1 Query: 641 QTTDQELQHLRNCIPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLG 462 Q EL+ L + V I+ ++ GN + ND + +P+++ + E +AD + Sbjct: 70 QVLSSELRELEKSLDVLV----IETPMTCFGNNLLINDRGGIANPEMESSVVEKVADFMD 125 Query: 461 VEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIA 282 +E+ + T+ G VG +NRGGL +P+ + + +L + V ++ GTVN G++++ Sbjct: 126 IELVKGTVGGIKTVGMAAVVTNRGGLANPNINEWEAKKLQEVAGVEVLTGTVNFGTDMVG 185 Query: 281 AGMTVNDWTAFCGSDTTATELSVIE 207 +G+ N G DTT EL ++E Sbjct: 186 SGLVANSKGYVVGRDTTGFELGIVE 210 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = -1 Query: 485 ELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLV 318 + I + L V+V IAG+ LVG+ A ++RG +V +L EL L V ++ Sbjct: 33 DAIQEKLDVDVIVTKIAGSELVGAMMALNSRGAVVSDQVLSSELRELEKSLDVLVI 88
>IF6_METJA (Q60357) Translation initiation factor 6 (aIF-6)| Length = 228 Score = 77.8 bits (190), Expect = 3e-14 Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 4/151 (2%) Frame = -1 Query: 632 DQELQHLRNCIPDQVV---VQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLG 462 D+EL ++N + + + V+ I + +ALGN I ND AL P+L K ++ I D L Sbjct: 78 DEELDRIKNFLKENNLDLNVEIIKSKNTALGNLILTNDKGALISPEL-KDFKKDIEDSLN 136 Query: 461 VEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVA-GTVNRGSEVI 285 VEV TIA VGS +N+G L HP ++L+ L +L +V + GT N+G+ + Sbjct: 137 VEVEIGTIAELPTVGSNAVVTNKGCLTHPLVEDDELEFLKSLFKVEYIGKGTANKGTTSV 196 Query: 284 AAGMTVNDWTAFCGSDTTATELSVIESVFKL 192 A + N A G DTT EL +IE L Sbjct: 197 GACIIANSKGAVVGGDTTGPELLIIEDALGL 227 Score = 30.8 bits (68), Expect = 3.7 Identities = 19/87 (21%), Positives = 39/87 (44%) Frame = -1 Query: 590 VVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSY 411 +++++ + +G + + L LDK +++VL + + I G+ LVGS Sbjct: 3 MIIRKYFSGIPTIGVLALTTEEITLLPIFLDKDDVNEVSEVLETKCLQTNIGGSSLVGSL 62 Query: 410 CAFSNRGGLVHPHTSIEDLDELSTLLQ 330 + G L+ E+LD + L+ Sbjct: 63 SVANKYGLLLPKIVEDEELDRIKNFLK 89
>IF6_PICTO (Q6L2L0) Translation initiation factor 6 (aIF-6)| Length = 217 Score = 77.8 bits (190), Expect = 3e-14 Identities = 45/123 (36%), Positives = 64/123 (52%) Frame = -1 Query: 575 IDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSN 396 I+ +L+A GN I NDH AL H + + I DVLGVE + +IAG VGS ++ Sbjct: 91 INNKLNAAGNNIIANDHAALIHKSFPDSIRKKIEDVLGVETVKGSIAGIKTVGSVAVLND 150 Query: 395 RGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELS 216 RG LV +++ LS L ++ + GT N GS + A + N G TT+ EL Sbjct: 151 RGMLVTSEADEDEIKYLSDLFKINVKTGTANFGSNYVGASIIANSNGILVGEATTSIELG 210 Query: 215 VIE 207 I+ Sbjct: 211 RID 213
>IF6_METMP (Q6M156) Translation initiation factor 6 (aIF-6)| Length = 227 Score = 58.5 bits (140), Expect = 2e-08 Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 4/153 (2%) Frame = -1 Query: 638 TTDQELQHLRNCIPDQ---VVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADV 468 TT++EL+ ++ + + V ++R+ + +A GN I N+ + +L + + I DV Sbjct: 74 TTEKELELIKMFLKENSLDVNLERLKAKNTAFGNLILTNNKGCIISEELSRF-RKTIEDV 132 Query: 467 LGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVA-GTVNRGSE 291 L VE A VGS +++G LVHP T +L+ + +L+V V GT NRG Sbjct: 133 LDVESGVGNYAELPTVGSNGVATDKGCLVHPLTDELELEWIQDILRVDYVERGTANRGVT 192 Query: 290 VIAAGMTVNDWTAFCGSDTTATELSVIESVFKL 192 + A + N A G DT+ E+ IE L Sbjct: 193 SVGACILANTKGAVVGGDTSGPEILKIEEALDL 225 Score = 30.0 bits (66), Expect = 6.3 Identities = 16/58 (27%), Positives = 33/58 (56%) Frame = -1 Query: 503 LDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQ 330 +D+ T E + +VL + + I+ + L+GS C ++ G LV T+ ++L+ + L+ Sbjct: 30 VDQKTMERMKNVLDIPATQLNISNSSLIGSLCVGNSNGLLVPNITTEKELELIKMFLK 87
>FSCN3_MOUSE (Q9QXW4) Fascin-3 (Testis fascin)| Length = 498 Score = 32.3 bits (72), Expect = 1.3 Identities = 15/46 (32%), Positives = 25/46 (54%) Frame = +3 Query: 255 SPVVHRHARSNDLATTVHGSSDKRDLEECGQLIKIFNGCVRMDQST 392 SP+ H +AR++ + + LEECG L+ +GC ++ ST Sbjct: 150 SPIYHSYARADHTVGRIWVDAAIPCLEECGFLLHFQDGCYHLETST 195
>EFG2_YEAST (P39677) Elongation factor G 2, mitochondrial precursor (mEF-G-2)| Length = 819 Score = 31.2 bits (69), Expect = 2.8 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 1/105 (0%) Frame = +3 Query: 114 PFDHLDVAVNQR-LPHVIDDRRGLAFSQLEDALDDGELGSGCV*ATEGSPVVHRHARSND 290 P +LD+ + Q + V+ D G +Q+ D+ + + +R +D Sbjct: 687 PIMNLDLTIPQSDVGTVLQDLTGARKAQILSIEDESSVSNSGASTCNSPENSNRIYIPSD 746 Query: 291 LATTVHGSSDKRDLEECGQLIKIFNGCVRMDQSTPVRECTVAPNK 425 TT+H + DK++ +E +K + P+RE T NK Sbjct: 747 AVTTLHATKDKKNTQETSSNVKKI-----IKAKVPLREITTYTNK 786
>MINC_THEMA (Q9X0D7) Probable septum site-determining protein minC| Length = 210 Score = 30.8 bits (68), Expect = 3.7 Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 15/122 (12%) Frame = -1 Query: 587 VVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADV-----LGVEVFRQTIAGNIL 423 V+ I R++ +G + D ++L + +K ++++ V LG+EV IL Sbjct: 24 VLNAISARITQMGGFFAKGDRISLMIENHNKHSQDIPRIVSHLRNLGLEV------SQIL 77 Query: 422 VGSYCAFSNRGGLVHPHTSIEDLDEL--------STLLQVP--LVAGTVNRGSEVIAAGM 273 VGS V T++E ++ T++ +V G VN+G+E++A G Sbjct: 78 VGSTVEGKENDLKVQSRTTVESTGKVIKRNIRSGQTVVHSGDVIVFGNVNKGAEILAGGS 137 Query: 272 TV 267 V Sbjct: 138 VV 139
>HLX1_MOUSE (Q61670) Homeobox protein HLX1| Length = 476 Score = 30.8 bits (68), Expect = 3.7 Identities = 26/79 (32%), Positives = 32/79 (40%) Frame = -1 Query: 551 GNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPH 372 G C D A+ P IAD+L V A LVG+ A + G VHPH Sbjct: 28 GGCSFALDPAAVKKPSF------CIADILHAGVGEPGPAAEGLVGASAALTAHLGSVHPH 81 Query: 371 TSIEDLDELSTLLQVPLVA 315 S + S L P+VA Sbjct: 82 ASFQAAAR-SPLRPTPVVA 99
>STAB2_HUMAN (Q8WWQ8) Stabilin-2 precursor (FEEL-2 protein) (Fasciclin EGF-like| laminin-type EGF-like and link domain-containing scavenger receptor 1) (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Hyaluronan receptor for endocytosis) [ Length = 2551 Score = 30.4 bits (67), Expect = 4.8 Identities = 13/38 (34%), Positives = 16/38 (42%) Frame = +3 Query: 402 ECTVAPNKDISCNCLTEYLNPKHICNKLLSCLVKVRVC 515 ECT +CNCL Y +C + CL K C Sbjct: 1529 ECTQTGPNQAACNCLPAYTGDGKVCTLINVCLTKNGGC 1566
>VP67_NPVCF (P41717) Major envelope glycoprotein precursor (gp67)| Length = 509 Score = 30.4 bits (67), Expect = 4.8 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%) Frame = -1 Query: 488 EELIADVLGVEVFRQTIAGNILVGS---YCAFSNRGGLVHPHTSIEDLDELSTLLQVPLV 318 +E + + +E+ + N+++G Y A++ GG + P+T IE+ E + + L+ Sbjct: 41 KETLQKDVEIEIVETNMDENVIIGYKGYYQAYAYNGGSLDPNTRIEETMETLNVAKEDLL 100 Query: 317 AGTVNRGSEV 288 ++ R EV Sbjct: 101 MWSIRRQCEV 110
>THIL_METJA (Q60337) Probable thiamine-monophosphate kinase (EC 2.7.4.16)| (Thiamine-phosphate kinase) Length = 319 Score = 30.4 bits (67), Expect = 4.8 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -1 Query: 356 LDELSTLLQVPLVAGTVNRGSEVIAAG 276 LD+ S L P+V G NRG E+I +G Sbjct: 107 LDDFSKLYDCPVVGGDTNRGDELILSG 133
>PROS_BOVIN (P07224) Vitamin K-dependent protein S precursor| Length = 675 Score = 30.0 bits (66), Expect = 6.3 Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Frame = +3 Query: 309 GSSDKRDLEECGQLIKIFNGCVRMDQSTPVRECTVAPNKDISCNCLTEY--LNPKHICNK 482 G + D+ EC + I GC ++ ++TP C+C + L+ K C Sbjct: 151 GEKCESDINECKDPVNINGGCSQICENTP---------GSYHCSCKNGFVMLSNKKDCKD 201 Query: 483 LLSCLVKVRVC 515 + C++K +C Sbjct: 202 VDECVLKPSIC 212
>CCD44_HUMAN (Q9BSH4) Coiled-coil domain-containing protein 44| Length = 297 Score = 30.0 bits (66), Expect = 6.3 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 7/57 (12%) Frame = -1 Query: 641 QTTDQELQHLRNCIPDQVVVQRIDERLSALGNC-ISC------NDHVALTHPDLDKA 492 +T D+E +++ I D + ++ ++L +LG C +SC N V L PDL++A Sbjct: 220 ETEDEEERNVFKFICDASSLHQVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQA 276
>EFG2_SYNY3 (P74228) Elongation factor G 2 (EF-G 2)| Length = 691 Score = 29.6 bits (65), Expect = 8.2 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 3/105 (2%) Frame = -1 Query: 602 IPDQVVVQRIDERLSALGNCISCNDHVALTHPDLDKATEELIADVLGVEVFRQTIAGN-- 429 IPD V + + RL + + +D AL L+ EEL AD L + R TIAG Sbjct: 199 IPDSVKDKTEEYRLRLVESVAEADD--ALMEKYLEG--EELTADELVAGLRRGTIAGTMV 254 Query: 428 -ILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRG 297 +L GS AF N+G + + D L + L+VP + G + G Sbjct: 255 PVLCGS--AFKNKGVQLLLDAVV---DYLPSPLEVPAIEGHLPDG 294 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,385,080 Number of Sequences: 219361 Number of extensions: 1896346 Number of successful extensions: 6135 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 5873 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6120 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)