>ATG26_YARLI (Q6C8M8) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
           (Autophagy-related protein 26)
          Length = 1424

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 17/60 (28%)
 Frame = +3

Query: 36  NYSPRQDEGLLXHRRQTDRLKDKTCC--------FFLA*H---------RDHSSSRSKTP 164
           N+SPRQ +  + H+  T+ ++D T          FF + H         + H+SSRS TP
Sbjct: 394 NFSPRQSQLAVGHKHVTESVRDSTLLHASGHHHHFFHSAHHESDGKSNSKSHTSSRSHTP 453

>K0256_MOUSE (Q6A098) Protein KIAA0256|
          Length = 1086

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 106 HVVSSSRNTETTRARDQKHHRTGQTHKHDSD*HTENR*LADEDG 237
           H  SS R     + +D KH  + Q+H+  SD ++E+    DEDG
Sbjct: 352 HSTSSERRQNLQKRQDNKHLNSTQSHR--SDPNSESLYFEDEDG 393

>K0256_HUMAN (Q93073) Protein KIAA0256|
          Length = 1101

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 106 HVVSSSRNTETTRARDQKHHRTGQTHKHDSD*HTENR*LADEDG 237
           H  SS R     +  D KH  + Q+H+  SD ++E+    DEDG
Sbjct: 353 HSTSSERRQNLQKRPDNKHLSSSQSHR--SDPNSESLYFEDEDG 394

>SSRP_MYCPA (Q73V46) SsrA-binding protein|
          Length = 169

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 27  SHPNYSPRQDEGLLXHRRQTDRLKDK 104
           S  N+ PR++  LL HR+Q DRL  K
Sbjct: 84  SWTNHDPRRNRKLLLHRQQIDRLVGK 109

>UL87_HCMVA (P16730) Protein UL87|
          Length = 941

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -2

Query: 281 TPSHRPVIHPSIYRLPSSSASYLFSVCQSESCLCV 177
           TP  R VIH +++RL S++A+    +C S   LCV
Sbjct: 877 TPHTREVIHQTLFRLCSAAAA-TSGLCSSPPPLCV 910

>SSRP_MYCTU (P0A612) SsrA-binding protein|
          Length = 160

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 27  SHPNYSPRQDEGLLXHRRQTDRLKDK 104
           S  N+ PR++  LL HRRQ D L  K
Sbjct: 75  SWTNHEPRRNRKLLLHRRQIDTLVGK 100

>SSRP_MYCLE (O32881) SsrA-binding protein|
          Length = 160

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 27  SHPNYSPRQDEGLLXHRRQTDRLKDK 104
           S  N+ PR++  LL HRRQ D L  K
Sbjct: 75  SWTNHDPRRNRKLLLHRRQIDTLVGK 100

>SSRP_MYCBO (P0A613) SsrA-binding protein|
          Length = 160

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3

Query: 27  SHPNYSPRQDEGLLXHRRQTDRLKDK 104
           S  N+ PR++  LL HRRQ D L  K
Sbjct: 75  SWTNHEPRRNRKLLLHRRQIDTLVGK 100

>JAG1_RAT (Q63722) Jagged-1 precursor (Jagged1) (CD339 antigen)|
          Length = 1219

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 3    RVKHRXPTSHPNYSPRQDEGLLXHRRQTDRLK 98
            +V  R PT HPN++ +QD   L   +  +R++
Sbjct: 1185 KVPQRTPTKHPNWTNKQDNRDLESAQSLNRME 1216

>FTHS_PICTO (Q6KZM3) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 535

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +2

Query: 173 DRHTNTTQTDTPKIDNLLTK-----TVDDRWMDG*LGDETGSGAQDL 298
           +RH+N T  +   I N+LTK     ++ D + DG      G GA DL
Sbjct: 361 NRHSNDTDAEINAISNILTKNGVEFSISDAYSDG------GHGALDL 401

>SSRP_CAUCR (Q9A8Z9) SsrA-binding protein|
          Length = 152

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 36  NYSPRQDEGLLXHRRQTDRL 95
           N+ PR+   LL HRRQ D+L
Sbjct: 71  NHEPRRHRKLLLHRRQIDKL 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,619,806
Number of Sequences: 219361
Number of extensions: 671116
Number of successful extensions: 1853
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1852
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)