Clone Information

BLAST Search Result

Clone Name	rbasd20b11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	HBD_BRAJA (Q45223) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1....	128	1e-29
2	HBD_BACSU (P45856) Probable 3-hydroxybutyryl-CoA dehydrogenase (...	124	2e-28
3	HBD_DEIRA (Q9RVG1) Probable 3-hydroxybutyryl-CoA dehydrogenase (...	110	2e-24
4	HBD_CLOAB (P52041) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1....	107	3e-23
5	HBD_CLODI (P45364) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1....	98	2e-20
6	HBD_CLOTS (P77851) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1....	89	1e-17
7	HCDH2_CAEEL (P41938) Probable 3-hydroxyacyl-CoA dehydrogenase B0...	69	1e-11
8	HCDH_HUMAN (Q16836) Short chain 3-hydroxyacyl-CoA dehydrogenase,...	65	2e-10
9	HCDH_RAT (Q9WVK7) Short chain 3-hydroxyacyl-CoA dehydrogenase, m...	64	3e-10
10	HCDH_MOUSE (Q61425) Short chain 3-hydroxyacyl-CoA dehydrogenase,...	64	3e-10
11	HCDH_PIG (P00348) Short chain 3-hydroxyacyl-CoA dehydrogenase, m...	64	4e-10
12	PAAH_ECOLI (P76083) Probable 3-hydroxybutyryl-CoA dehydrogenase ...	61	2e-09
13	HCDH1_CAEEL (P34439) Probable 3-hydroxyacyl-CoA dehydrogenase F5...	57	4e-08
14	FADJ_ERWCT (Q6D2L7) Fatty acid oxidation complex alpha subunit [...	48	2e-05
15	FADJ_IDILO (Q5QXM1) Fatty acid oxidation complex alpha subunit [...	45	2e-04
16	FADJ_SALTY (Q8ZNA7) Fatty acid oxidation complex alpha subunit [...	44	3e-04
17	FADJ_SALTI (Q8Z4Z0) Fatty acid oxidation complex alpha subunit [...	44	3e-04
18	FADJ_SALPA (Q5PCX6) Fatty acid oxidation complex alpha subunit [...	44	3e-04
19	FADJ_SALCH (Q57LW6) Fatty acid oxidation complex alpha subunit [...	44	3e-04
20	FADJ_VIBF1 (Q5E3U1) Fatty acid oxidation complex alpha subunit [...	44	3e-04
21	FADJ_SHIFL (Q83QQ0) Fatty acid oxidation complex alpha subunit [...	44	5e-04
22	FADJ_ECOLI (P77399) Fatty acid oxidation complex alpha subunit [...	44	5e-04
23	FADJ_ECOL6 (Q8FFG4) Fatty acid oxidation complex alpha subunit [...	44	5e-04
24	FADJ_ECO57 (Q8XCP2) Fatty acid oxidation complex alpha subunit [...	43	8e-04
25	FADJ_PHOLL (Q7N288) Fatty acid oxidation complex alpha subunit [...	42	0.002
26	FADJ_YERPE (Q8ZD45) Fatty acid oxidation complex alpha subunit [...	41	0.003
27	FADJ_YERPS (Q668V1) Fatty acid oxidation complex alpha subunit [...	41	0.003
28	FADJ_VIBPA (Q87MM3) Fatty acid oxidation complex alpha subunit [...	39	0.015
29	FADJ_VIBVY (Q7MIS5) Fatty acid oxidation complex alpha subunit [...	37	0.043
30	FADJ_VIBVU (Q8DB47) Fatty acid oxidation complex alpha subunit [...	37	0.043
31	FADJ_VIBCH (Q9KT58) Fatty acid oxidation complex alpha subunit [...	36	0.073
32	ECHA_HUMAN (P40939) Trifunctional enzyme alpha subunit, mitochon...	35	0.13
33	FADJ_PHOPR (Q6LTK3) Fatty acid oxidation complex alpha subunit [...	35	0.13
34	ECHA_RAT (Q64428) Trifunctional enzyme alpha subunit, mitochondr...	35	0.16
35	FADJ_SHEON (Q8ECP7) Fatty acid oxidation complex alpha subunit [...	34	0.36
36	ECHP_RAT (P07896) Peroxisomal bifunctional enzyme (PBE) (PBFE) [...	34	0.36
37	RR2_MESVI (Q9MUS8) Chloroplast 30S ribosomal protein S2	33	0.62
38	ECHA_PIG (Q29554) Trifunctional enzyme alpha subunit, mitochondr...	32	1.4
39	SYE_METMP (Q6LYI0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta...	32	1.4
40	FADB_ERWCT (Q6DAP5) Fatty oxidation complex alpha subunit [Inclu...	31	3.1
41	IL24_MOUSE (Q925S4) Interleukin-24 precursor (Melanoma different...	30	5.3
42	FADB_ACIAD (Q6FF68) Fatty oxidation complex alpha subunit [Inclu...	30	6.9
43	ECHP_MOUSE (Q9DBM2) Peroxisomal bifunctional enzyme (PBE) (PBFE)...	30	6.9
44	ROS1_ARATH (Q9SJQ6) ROS1 protein (Repressor of silencing 1) (DEM...	29	9.0

>HBD_BRAJA (Q45223) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)|
           (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD)
          Length = 293

 Score =  128 bits (321), Expect = 1e-29
 Identities = 58/84 (69%), Positives = 70/84 (83%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL+PMINEA +TLY GV   + ID  MKLG +HPMGPL+LADFIGLD CLS+++VLH G
Sbjct: 193 RILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFIGLDTCLSIMQVLHEG 252

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           L D+KY PCPLLV+YV+AG LG+K
Sbjct: 253 LADSKYRPCPLLVKYVEAGWLGRK 276

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>HBD_BACSU (P45856) Probable 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)|
           (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD)
          Length = 287

 Score =  124 bits (311), Expect = 2e-28
 Identities = 58/84 (69%), Positives = 68/84 (80%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R+L+PMINEA + +Y GVA  + ID  MKLG NHPMGPL LADFIGLD CLS++ VLH+G
Sbjct: 191 RVLLPMINEAIYCVYEGVAKPEAIDEVMKLGMNHPMGPLALADFIGLDTCLSIMEVLHSG 250

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           LGD+KY PCPLL +YV AG LGKK
Sbjct: 251 LGDSKYRPCPLLRKYVKAGWLGKK 274

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>HBD_DEIRA (Q9RVG1) Probable 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)|
           (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD)
          Length = 278

 Score =  110 bits (276), Expect = 2e-24
 Identities = 54/84 (64%), Positives = 63/84 (75%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RILMPM+NEA   +  GVA  + ID  MKLG NHPMGPL LADFIGLD CL+++ VLH G
Sbjct: 187 RILMPMLNEAIQCVMEGVAEPEAIDGIMKLGMNHPMGPLTLADFIGLDTCLAIMEVLHQG 246

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           LGD+KY P PLL + V AG LG+K
Sbjct: 247 LGDDKYRPSPLLRKMVQAGLLGRK 270

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>HBD_CLOAB (P52041) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)|
           (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD)
          Length = 282

 Score =  107 bits (267), Expect = 3e-23
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL+PMINEA   L  G+A+ +DID  MKLG NHPMGPL+L DFIGLD+CL+++ VL++ 
Sbjct: 189 RILIPMINEAVGILAEGIASVEDIDKAMKLGANHPMGPLELGDFIGLDICLAIMDVLYSE 248

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
            GD+KY P  LL +YV AG LG+K
Sbjct: 249 TGDSKYRPHTLLKKYVRAGWLGRK 272

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>HBD_CLODI (P45364) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)|
           (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD)
          Length = 281

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 48/84 (57%), Positives = 60/84 (71%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL+PMINEA      GVA+K++ID  MKLG NHPMGPL L D IGLDV L+++ VL+  
Sbjct: 188 RILIPMINEAVGIYADGVASKEEIDEAMKLGANHPMGPLALGDLIGLDVVLAIMNVLYTE 247

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
            GD KY+  PLL + V A +LG+K
Sbjct: 248 FGDTKYTAHPLLAKMVRANQLGRK 271

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>HBD_CLOTS (P77851) 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)|
           (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD)
          Length = 289

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 45/84 (53%), Positives = 56/84 (66%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL+PMINEA   L   +AT   ID  MKLG NHP+GPL L+  IG DV L+++ VL+  
Sbjct: 188 RILIPMINEAIGILAVVLATDKSIDEAMKLGANHPIGPLALSSLIGNDVVLAIMNVLYEE 247

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
            GD+KY P PLL + V  G LG+K
Sbjct: 248 YGDSKYRPHPLLKKVVRGGLLGRK 271

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>HCDH2_CAEEL (P41938) Probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 (EC|
           1.1.1.35)
          Length = 309

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R+L+P + EA      G A+ +DID  MKLG  +PMGP +L+D++GLD C  ++   H  
Sbjct: 216 RLLVPYMFEALRLYERGDASMEDIDVAMKLGAGYPMGPFELSDYVGLDTCKFIMDGWHAQ 275

Query: 415 LGDN-KYSPCPLLVQYVDAGRLGKK 344
             +   ++P PLL   VD+G+ G+K
Sbjct: 276 YPEEVAFTPSPLLNSLVDSGKNGRK 300

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>HCDH_HUMAN (Q16836) Short chain 3-hydroxyacyl-CoA dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.35) (HCDH) (Medium and short chain
           L-3-hydroxyacyl-coenzyme A dehydrogenase)
          Length = 314

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R+L+P + EA      G A+K+DIDT MKLG  +PMGP +L D++GLD    ++   H  
Sbjct: 221 RLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFIVDGWHEM 280

Query: 415 LGDNK-YSPCPLLVQYVDAGRLGKK 344
             +N  + P P L + V   + GKK
Sbjct: 281 DAENPLHQPSPSLNKLVAENKFGKK 305

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>HCDH_RAT (Q9WVK7) Short chain 3-hydroxyacyl-CoA dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.35) (HCDH) (Medium and short chain
           L-3-hydroxyacyl-coenzyme A dehydrogenase)
          Length = 314

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R+L+P + EA      G A+K+DIDT MKLG  +PMGP +L D++GLD    +L   H  
Sbjct: 221 RLLVPYLIEAIRLHERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFILDGWHEM 280

Query: 415 LGDNK-YSPCPLLVQYVDAGRLGKK 344
             +N  + P P +   V   +LGKK
Sbjct: 281 DPENPLFQPSPSMNNLVAQKKLGKK 305

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>HCDH_MOUSE (Q61425) Short chain 3-hydroxyacyl-CoA dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.35) (HCDH) (Medium and short chain
           L-3-hydroxyacyl-coenzyme A dehydrogenase)
          Length = 314

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R+L+P + EA      G A+K+DIDT MKLG  +PMGP +L D++GLD    +L   H  
Sbjct: 221 RLLVPYLIEAVRLHERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFILDGWHEM 280

Query: 415 LGDNK-YSPCPLLVQYVDAGRLGKK 344
             +N  + P P +   V   +LGKK
Sbjct: 281 EPENPLFQPSPSMNNLVAQKKLGKK 305

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>HCDH_PIG (P00348) Short chain 3-hydroxyacyl-CoA dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.35) (HCDH) (Medium and short chain
           L-3-hydroxyacyl-coenzyme A dehydrogenase)
          Length = 314

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R+L+P + EA      G A+K+DIDT MKLG  +PMGP +L D++GLD    ++   H  
Sbjct: 221 RLLVPYLIEAVRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFIIDGWHEM 280

Query: 415 LGDNK-YSPCPLLVQYVDAGRLGKK 344
              N  + P P + + V   + GKK
Sbjct: 281 DSQNPLFQPSPAMNKLVAENKFGKK 305

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>PAAH_ECOLI (P76083) Probable 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)|
           (Beta-hydroxybutyryl-CoA dehydrogenase) (BHBD)
          Length = 475

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 32/74 (43%), Positives = 43/74 (58%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R +  +INEA   L  GVA++ DIDT M+LG N+P GPL     +G    L +L  L + 
Sbjct: 392 RTVAMIINEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQHH 451

Query: 415 LGDNKYSPCPLLVQ 374
            G+ +Y PC LL Q
Sbjct: 452 YGEERYRPCSLLRQ 465



 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R+  P  +EA+  L   VA  + ID  ++ G   PMGPL+L D IG DV  +V   + N 
Sbjct: 193 RVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVNFAVTCSVFNA 252

Query: 415 L-GDNKYSPCPLLVQYVDAGRLGKK 344
              + ++ P  +  + V  GRLGKK
Sbjct: 253 FWQERRFLPSLVQQELVIGGRLGKK 277

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>HCDH1_CAEEL (P34439) Probable 3-hydroxyacyl-CoA dehydrogenase F54C8.1 (EC|
           1.1.1.35)
          Length = 298

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R+L+P   EA      G A+  DID  MKLG  HPMGP +LAD+IGLD    V+      
Sbjct: 204 RLLIPYFFEAARMYERGDASMTDIDEAMKLGAGHPMGPFELADYIGLDTVKFVMDGWAAK 263

Query: 415 LGD-NKYSPCPLLVQYVDAGRLGKK 344
             +   +   PL+ + V  G+LG+K
Sbjct: 264 YPEVQLFEASPLVDKLVAEGKLGRK 288

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>FADJ_ERWCT (Q6D2L7) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 731

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 33/84 (39%), Positives = 44/84 (52%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P INEA + L  G    + ID  + +    P+GPL L D +G+DV   ++ VL   
Sbjct: 511 RILAPYINEAAYCLLEGEPI-ESIDYAL-VRFGFPVGPLALLDEVGIDVATKIVPVLSEE 568

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           LGD   SP P     +  GR G+K
Sbjct: 569 LGDRFTSP-PAFDAILKDGRKGRK 591



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVAT-KDDIDTGMKLGTNHPM---GPLQLADFIGLDVCLSVLRV 428
           R +M M+NEA   L  GV     D D G   G   P    GP    D +G++  +  L V
Sbjct: 636 RAVMMMLNEAARCLDEGVIQCARDGDIGAVFGIGFPPFLGGPFHYMDRLGMETVVKTLLV 695

Query: 427 LHNGLGDNKYSPCPLLV 377
           L    GD +++PC  L+
Sbjct: 696 LQQQYGD-RFAPCERLL 711

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>FADJ_IDILO (Q5QXM1) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 708

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 32/84 (38%), Positives = 42/84 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P +NEA   L  G   +    T +K G   P+GP+ L D +G+DV   V  VL   
Sbjct: 501 RILAPYMNEAARLLLAGEPIEHIDKTLVKFG--FPVGPITLLDEVGIDVAAKVAPVLVKE 558

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           LGD   +P     + +D  R GKK
Sbjct: 559 LGDRFEAP-EAFEKLIDDDRKGKK 581



 Score = 37.4 bits (85), Expect = 0.033
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
 Frame = -2

Query: 589 LMPMINEAFWTLYTGVATKD-DIDTGMKLGTNHPM---GPLQLADFIGLDVCLSVLRVLH 422
           L+PM+NEA + L   +     D D G   G   P    GP +  D  GL+  ++ L  L 
Sbjct: 624 LLPMLNEAAYCLQEEIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDSQGLETIVNKLEKLA 683

Query: 421 NGLGDNKYSPCPLLVQYVDAG 359
              G+ +Y+P PLL Q ++ G
Sbjct: 684 AERGE-RYTPAPLLKQMLENG 703

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>FADJ_SALTY (Q8ZNA7) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 715

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 27/84 (32%), Positives = 42/84 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P INEA   L  G   +      +K G   P+GP+QL D +G+D    ++ VL   
Sbjct: 497 RILAPYINEAIRMLTEGERVEHIDAALVKFG--FPVGPIQLLDEVGIDTGTKIIPVLEAA 554

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
            G+   +P  ++   ++  R G+K
Sbjct: 555 YGERFSAPANVVASILNDDRKGRK 578

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>FADJ_SALTI (Q8Z4Z0) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 715

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 27/84 (32%), Positives = 42/84 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P INEA   L  G   +      +K G   P+GP+QL D +G+D    ++ VL   
Sbjct: 497 RILAPYINEAIRMLTEGERVEHIDAALVKFG--FPVGPIQLLDEVGIDTGTKIIPVLEAA 554

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
            G+   +P  ++   ++  R G+K
Sbjct: 555 YGERFSAPANVVASILNDDRKGRK 578

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>FADJ_SALPA (Q5PCX6) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 715

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 27/84 (32%), Positives = 42/84 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P INEA   L  G   +      +K G   P+GP+QL D +G+D    ++ VL   
Sbjct: 497 RILAPYINEAIRMLTEGERVEHIDAALVKFG--FPVGPIQLLDEVGIDTGTKIIPVLEAA 554

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
            G+   +P  ++   ++  R G+K
Sbjct: 555 YGERFSAPANVVASILNDDRKGRK 578

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>FADJ_SALCH (Q57LW6) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 715

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 27/84 (32%), Positives = 42/84 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P INEA   L  G   +      +K G   P+GP+QL D +G+D    ++ VL   
Sbjct: 497 RILAPYINEAIRMLTEGERVEHIDAALVKFG--FPVGPIQLLDEVGIDTGTKIIPVLEAA 554

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
            G+   +P  ++   ++  R G+K
Sbjct: 555 YGERFSAPANVVASILNDDRKGRK 578

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>FADJ_VIBF1 (Q5E3U1) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 687

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 30/84 (35%), Positives = 44/84 (52%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P +NEA   L  G    + +D  + L    P+GP+ L D +G+D+   ++ +L   
Sbjct: 498 RILAPYMNEAARLLLAGEPI-EVLDEAL-LDFGFPVGPISLLDEVGVDIGAKIMPILEAE 555

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           LGD   SP  +    +D  RLGKK
Sbjct: 556 LGDRFRSP-DVFQTLIDDKRLGKK 578

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>FADJ_SHIFL (Q83QQ0) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 714

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 27/84 (32%), Positives = 42/84 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P INEA   L  G   +      +K G   P+GP+QL D +G+D    ++ VL   
Sbjct: 497 RILAPYINEAIRMLTEGERVEHIDAALVKFG--FPVGPIQLLDEVGIDTGTKIIPVLEAA 554

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
            G+   +P  ++   ++  R G+K
Sbjct: 555 YGERFSAPANVVSSILNDDRKGRK 578

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>FADJ_ECOLI (P77399) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 714

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 27/84 (32%), Positives = 42/84 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P INEA   L  G   +      +K G   P+GP+QL D +G+D    ++ VL   
Sbjct: 497 RILAPYINEAIRMLTQGERVEHIDAALVKFG--FPVGPIQLLDEVGIDTGTKIIPVLEAA 554

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
            G+   +P  ++   ++  R G+K
Sbjct: 555 YGERFSAPANVVSSILNDDRKGRK 578

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>FADJ_ECOL6 (Q8FFG4) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 714

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 27/84 (32%), Positives = 42/84 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P INEA   L  G   +      +K G   P+GP+QL D +G+D    ++ VL   
Sbjct: 497 RILAPYINEAIRMLTEGERVEHIDAALVKFG--FPVGPIQLLDEVGIDTGTKIIPVLEAA 554

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
            G+   +P  ++   ++  R G+K
Sbjct: 555 YGERFSAPANVVSSILNDDRKGRK 578

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>FADJ_ECO57 (Q8XCP2) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 714

 Score = 42.7 bits (99), Expect = 8e-04
 Identities = 27/84 (32%), Positives = 41/84 (48%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P INEA   L  G          +K G   P+GP+QL D +G+D    ++ VL   
Sbjct: 497 RILAPYINEAIRMLTEGERVAHIDAALVKFG--FPVGPIQLLDEVGIDTGTKIIPVLEAA 554

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
            G+   +P  ++   ++  R G+K
Sbjct: 555 YGERFSAPANVVSSILNDDRKGRK 578

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>FADJ_PHOLL (Q7N288) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 727

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 32/84 (38%), Positives = 43/84 (51%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL+P I+EA   L  G    D ID G  +    P+GP+ L D +G+DV   ++ VL   
Sbjct: 512 RILVPYISEAAHCLVAGEPI-DHID-GALVNFGFPVGPINLLDEVGIDVGTKIMPVLVEQ 569

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           LG    +P  L     D GR G+K
Sbjct: 570 LGPRFAAPESLDAVLKD-GRKGRK 592



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKD-DIDTGMKLGTNHPM---GPLQLADFIGLDVCLSVLRV 428
           R +M M+NEA   L  G+     D D G   G   P    GP +  D +G    + +LR 
Sbjct: 641 RCVMLMLNEAVRCLDEGIIRSPRDGDIGAVFGIGFPPFFGGPFRYIDSLGCARVVEILRR 700

Query: 427 LHNGLGDNKYSPCPLLVQYVDAGR 356
           L +  GD ++ PC  LV   +  +
Sbjct: 701 LESQYGD-RFVPCECLVNMAEQNK 723

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>FADJ_YERPE (Q8ZD45) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 747

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 28/84 (33%), Positives = 42/84 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P INEA   L  G    + +D  + +    P+GP+ L D +G+DV   ++ +L   
Sbjct: 504 RILAPYINEAARCLLDGEPI-ESVDNAL-VDFGFPVGPMMLLDEVGIDVATKIMPILVEQ 561

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           LG    +P P     +  GR G+K
Sbjct: 562 LGPRFAAP-PSFDVILKDGRKGRK 584

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>FADJ_YERPS (Q668V1) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 753

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 28/84 (33%), Positives = 42/84 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P INEA   L  G    + +D  + +    P+GP+ L D +G+DV   ++ +L   
Sbjct: 504 RILAPYINEAARCLLDGEPI-ESVDNAL-VDFGFPVGPMMLLDEVGIDVATKIMPILVEQ 561

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           LG    +P P     +  GR G+K
Sbjct: 562 LGPRFAAP-PSFDVILKDGRKGRK 584

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>FADJ_VIBPA (Q87MM3) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 703

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 28/84 (33%), Positives = 42/84 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P +NEA   L       + +D G  L    P+GP+ L D +G+D+   ++ +L N 
Sbjct: 499 RILAPYMNEAAHILLANEPI-EKLD-GALLDFGFPVGPITLLDEVGVDIGAKIMPILVNE 556

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           LG+    P    +   D GR G+K
Sbjct: 557 LGERFKGPDVFDILLND-GRKGRK 579

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>FADJ_VIBVY (Q7MIS5) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 705

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 29/84 (34%), Positives = 41/84 (48%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P +NE+   L       D IDT + L    P+GP+ L D +G+D+   ++ +L   
Sbjct: 499 RILAPYMNESAHILLANEPI-DKIDTAL-LDFGFPVGPITLLDEVGVDIGAKIMPILVAE 556

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           LG     P    V   D GR G+K
Sbjct: 557 LGARFKGPDVFDVLLND-GRKGRK 579

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>FADJ_VIBVU (Q8DB47) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 705

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 29/84 (34%), Positives = 41/84 (48%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P +NE+   L       D IDT + L    P+GP+ L D +G+D+   ++ +L   
Sbjct: 499 RILAPYMNESAHILLANEPI-DKIDTAL-LDFGFPVGPITLLDEVGVDIGAKIMPILVAE 556

Query: 415 LGDNKYSPCPLLVQYVDAGRLGKK 344
           LG     P    V   D GR G+K
Sbjct: 557 LGARFKGPDVFDVLLND-GRKGRK 579

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>FADJ_VIBCH (Q9KT58) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 708

 Score = 36.2 bits (82), Expect = 0.073
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P +NEA   L  G    + +D  + L    P+GP+ L D +G+D+   ++ +L   
Sbjct: 502 RILAPYMNEAAQVLMAGEPI-EKLDAAL-LDFGFPVGPITLLDEVGVDIGAKIMPILVKE 559

Query: 415 LGDNKYSP 392
           LG     P
Sbjct: 560 LGPRFQGP 567



 Score = 31.2 bits (69), Expect = 2.4
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTG-VATKDDIDTGMKLGTNHPM---GPLQLADFIGLDVCLSVLRV 428
           R L+PM+NEA   L  G + +  D D G   G   P    GP +  D +GL   + ++  
Sbjct: 622 RCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMN- 680

Query: 427 LHNGLGDNKYSPCPLLVQYVDAG 359
            H      +++PC  L+     G
Sbjct: 681 QHTEKYGERFAPCDGLLTRAGLG 703

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>ECHA_HUMAN (P40939) Trifunctional enzyme alpha subunit, mitochondrial|
           precursor (TP-alpha) (78 kDa gastrin-binding protein)
           [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17);
           Long chain 3-hydroxyacyl-CoA dehydrogenase (EC
           1.1.1.211)]
          Length = 763

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATK--DDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLH 422
           R L PM++E    L  GV  K  D + T        P+G   L D +G+DV   V   L 
Sbjct: 549 RCLAPMMSEVIRILQEGVDPKKLDSLTTSF----GFPVGAATLVDEVGVDVAKHVAEDLG 604

Query: 421 NGLGDNKYSPCP-LLVQYVDAGRLGKK 344
              G+      P LL Q V  G LG+K
Sbjct: 605 KVFGERFGGGNPELLTQMVSKGFLGRK 631

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>FADJ_PHOPR (Q6LTK3) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 715

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 23/68 (33%), Positives = 36/68 (52%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL P +NEA   L +G    + ID  + L    P+GP+ L D +G+D+   +  +L   
Sbjct: 510 RILAPYMNEAAAVLLSGEPI-EHIDRSL-LDFGFPVGPITLLDEVGVDIGAKISPILLAE 567

Query: 415 LGDNKYSP 392
           LG+   +P
Sbjct: 568 LGERFKAP 575

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>ECHA_RAT (Q64428) Trifunctional enzyme alpha subunit, mitochondrial|
           precursor (TP-alpha) [Includes: Long-chain enoyl-CoA
           hydratase (EC 4.2.1.17); Long chain 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.211)]
          Length = 763

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATK--DDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLH 422
           R L PM++E    L  GV  K  D + TG       P+G   LAD +G+DV   V   L 
Sbjct: 549 RCLAPMMSEVIRILQEGVDPKKLDALTTGF----GFPVGAATLADEVGIDVAQHVAEDLG 604

Query: 421 NGLGDN-KYSPCPLLVQYVDAGRLGKK 344
              G+        LL   V  G LG+K
Sbjct: 605 KAFGERFGGGSVELLKLMVSKGFLGRK 631

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>FADJ_SHEON (Q8ECP7) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 707

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           RIL   +NEA   L  G + +      +K G   P+GP+ L D +G+DV   +  +L   
Sbjct: 501 RILALYMNEAAQLLLEGQSVEHLDKALVKFG--FPVGPITLLDEVGIDVGAKISPILEKE 558

Query: 415 LGDNKYSP 392
           LG+   +P
Sbjct: 559 LGERFKAP 566

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>ECHP_RAT (P07896) Peroxisomal bifunctional enzyme (PBE) (PBFE) [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3,2-trans-enoyl-CoA
           isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase
           (EC 1.1.1.35)]
          Length = 721

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R+L P  N+ F+ L  G +  +D+D G+       MGP +++D  GLDV   + +    G
Sbjct: 481 RMLAPYYNQGFFLLEEG-SKPEDVD-GVLEEFGFKMGPFRVSDLAGLDVGWKIRK--GQG 536

Query: 415 L--------------GDNKYSPCPLLVQYVDAGRLGKK 344
           L              G+++YS  PL     +AGR G+K
Sbjct: 537 LTGPSLPPGTPVRKRGNSRYS--PLGDMLCEAGRFGQK 572

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>RR2_MESVI (Q9MUS8) Chloroplast 30S ribosomal protein S2|
          Length = 228

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -3

Query: 567 HFGHFTRGWQPKMTS 523
           HFGH TRGW PKM+S
Sbjct: 15  HFGHQTRGWNPKMSS 29

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>ECHA_PIG (Q29554) Trifunctional enzyme alpha subunit, mitochondrial|
           precursor (TP-alpha) (78 kDa gastrin-binding protein)
           [Includes: Long-chain enoyl-CoA hydratase (EC 4.2.1.17);
           Long chain 3-hydroxyacyl-CoA dehydrogenase (EC
           1.1.1.211)]
          Length = 763

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATK--DDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLH 422
           R L PM++E    L  GV  K  D + T        P+G   L D +G+DV   V   L 
Sbjct: 549 RCLAPMMSEVLRILQEGVGPKKLDSLTTSF----GFPVGAATLMDEVGMDVAKHVAENLG 604

Query: 421 NGLGDN-KYSPCPLLVQYVDAGRLGKK 344
              G+        +L Q +  G LG+K
Sbjct: 605 KIFGERFAGGNLDVLKQMISKGFLGRK 631

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>SYE_METMP (Q6LYI0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 555

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -1

Query: 371 CRCRTTWKEARTRCILLWEKLFIG*TQVISVNISVRLLSKEMKLCMYFVYQWKKTRRPK 195
           C+CR T  E     I LWEK+  G    ++V +   +  K   +  + +++ ++T  PK
Sbjct: 205 CKCRDTTPEEN---IALWEKMLAGELDNVAVRLKTDIAHKNPSIRDFPIFRIERTPHPK 260

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>FADB_ERWCT (Q6DAP5) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA|
           hydratase (EC 4.2.1.17);
           Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
           5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.
          Length = 729

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R+L P    AF  L    A   +ID  M+     PMGP  L D +G+D       V+  G
Sbjct: 501 RVLFPYF-AAFSLLLRDGADFREIDNAMEKKFGWPMGPAYLLDVVGIDTAHHAQAVMAEG 559

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>IL24_MOUSE (Q925S4) Interleukin-24 precursor (Melanoma|
           differentiation-associated gene 7 protein) (MDA-7)
           (IL-4-induced secreted protein) (Th2-specific cytokine
           FISP)
          Length = 181

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
 Frame = -2

Query: 592 ILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCL---SVLRVLH 422
           +++P + EAFWT+   V T+DDI T ++L     + P  L +  G + C    S+L+   
Sbjct: 39  VVLPELWEAFWTVKNTVQTQDDI-TSIRL-----LKPQVLRNVSGAESCYLAHSLLKFYL 92

Query: 421 NGLGDNKYS 395
           N +  N +S
Sbjct: 93  NTVFKNYHS 101

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>FADB_ACIAD (Q6FF68) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA|
           hydratase (EC 4.2.1.17);
           Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
           5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.
          Length = 717

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGM-KLGTNHPMGPLQLADFIGLDVCLSVLRVLHN 419
           R+L P    AF  L    A    ID  M K G   PMGP  L D +G+D  +    V+  
Sbjct: 503 RVLFPYFG-AFDLLLKDGADFQQIDKVMEKFGW--PMGPAYLMDVVGIDTGVHGAEVMAE 559

Query: 418 GLGDNKYSPCPLLVQYV-DAGRLGKK 344
           G  D         +Q + +A RLG+K
Sbjct: 560 GFPDRMKPDYKGSIQTMYEAKRLGQK 585

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>ECHP_MOUSE (Q9DBM2) Peroxisomal bifunctional enzyme (PBE) (PBFE) [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3,2-trans-enoyl-CoA
           isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase
           (EC 1.1.1.35)]
          Length = 717

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 14/98 (14%)
 Frame = -2

Query: 595 RILMPMINEAFWTLYTGVATKDDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVLRVLHNG 416
           R+L P  N+ ++ +  G  +K +   G+       MGP +++D  GLDV   V +    G
Sbjct: 477 RMLAPYYNQGYFLIEEG--SKPEGVDGVLEEFGFRMGPFRVSDLAGLDVGWKVRK--GQG 532

Query: 415 L--------------GDNKYSPCPLLVQYVDAGRLGKK 344
           L              G+ +YS  P+     +AGR G+K
Sbjct: 533 LTGPSLPPGTPTRKRGNTRYS--PIADMLCEAGRFGQK 568

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>ROS1_ARATH (Q9SJQ6) ROS1 protein (Repressor of silencing 1) (DEMETER-like|
           protein 1)
          Length = 1393

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -3

Query: 294 PSHLCKHFCAAVEQRNEVVYVLCISVEENKKTKSSTPSVRK 172
           P HL   +C+  +Q N+++    ++V + K TKS     ++
Sbjct: 405 PEHLTSGYCSKPQQNNKILVDTRVTVSKKKPTKSEKSQTKQ 445


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,827,068
Number of Sequences: 219361
Number of extensions: 1675549
Number of successful extensions: 4204
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 4089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4202
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result