Clone Name | rbasd20b10 |
---|---|
Clone Library Name | barley_pub |
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 1120 bits (565), Expect = 0.0 Identities = 574/577 (99%) Strand = Plus / Minus Query: 1 ggcgactcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 ggcgactcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggct 518 Query: 61 tccatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 517 tccatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccatggccat 458 Query: 121 agaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 agaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcat 398 Query: 181 tacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 tacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccac 338 Query: 241 ggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 337 ggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgcg 278 Query: 301 tgacatctggttcaccggattcagggagaagattcagtttaggatagtcactagggcatt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 tgacatctggttcaccggattcagggagaagattcagtttaggatagtcactagggcatt 218 Query: 361 ttggaccacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 ttggaccacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccg 158 Query: 421 cgaaacggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccct 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 cgaaatggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccct 98 Query: 481 ccacctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 ccacctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaa 38 Query: 541 tactcttgctgggtgccatggttggcttcttggcttt 577 ||||||||||||||||||||||||||||||||||||| Sbjct: 37 tactcttgctgggtgccatggttggcttcttggcttt 1
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 1072 bits (541), Expect = 0.0 Identities = 568/577 (98%) Strand = Plus / Minus Query: 1 ggcgactcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggct 60 |||||| ||||||||||||||||||||| | |||| |||||||||||||||||||| || Sbjct: 584 ggcgacccttattggaacaagggaaaaacagaaatgcataagtaagatgatacatttcct 525 Query: 61 tccatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccat 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 tcgatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccat 465 Query: 121 agaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 agaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcat 405 Query: 181 tacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccac 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 tacaaaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccac 345 Query: 241 ggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 ggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgag 285 Query: 301 tgacatctggttcaccggattcagggagaagattcagtttaggatagtcactagggcatt 360 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 284 tgacatctggttcaccggattcagggagaagattaagtttaggatagtcactagggcatt 225 Query: 361 ttggaccacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 ttggaccacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccg 165 Query: 421 cgaaacggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 cgaaacggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccct 105 Query: 481 ccacctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104 ccacctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaa 45 Query: 541 tactcttgctgggtgccatggttggcttcttggcttt 577 ||||||||||||||||||||||||||||||||||||| Sbjct: 44 tactcttgctgggtgccatggttggcttcttggcttt 8
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 706 bits (356), Expect = 0.0 Identities = 392/404 (97%) Strand = Plus / Minus Query: 1 ggcgactcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggct 60 |||||| ||||||||||||||||||||| | |||| |||||||||||||||||||| || Sbjct: 404 ggcgacccttattggaacaagggaaaaacagaaatgcataagtaagatgatacatttcct 345 Query: 61 tccatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccat 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 tcgatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccat 285 Query: 121 agaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcat 180 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 284 agaaatcatgcacaagaaggcatgattaggattcaacagactgaatgactgcaccatcat 225 Query: 181 tacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccac 240 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 tacaaaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccat 165 Query: 241 ggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 ggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgag 105 Query: 301 tgacatctggttcaccggattcagggagaagattcagtttaggatagtcactagggcatt 360 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 104 tgacatcgggttcaccggattcagggagaagattaagtttaggatagtcactagggcatt 45 Query: 361 ttggaccacttatgattttacaacgacaagcacctgcgcagact 404 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 ttggaccacttatgattttacaacgacaagcacctgcgcagact 1
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 656 bits (331), Expect = 0.0 Identities = 507/563 (90%), Gaps = 2/563 (0%) Strand = Plus / Minus Query: 6 ctcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttcca 64 ||||||||||||| ||||||||| | |||||||||| |||||||||||||| ||||| | Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538 Query: 65 tacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaa 124 | | | |||||||||||||||| || || | |||||||||| |||||||||||||||||| Sbjct: 537 t-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479 Query: 125 atcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattaca 184 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattaca 419 Query: 185 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 418 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggga 359 Query: 245 aacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 304 |||||||||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| | Sbjct: 358 aacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgc 299 Query: 305 atctggttcaccggattcagggagaagattcagtttaggatagtcactagggcattttgg 364 || |||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 298 atttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgg 239 Query: 365 accacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaa 424 || |||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||| Sbjct: 238 gccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaa 179 Query: 425 acggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccac 484 |||||| | ||||||||||||||| | ||||| |||||||||||| || | || || Sbjct: 178 acggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctac 119 Query: 485 ctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatact 544 ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 118 ttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatact 59 Query: 545 cttgctgggtgccatggttggct 567 |||| ||| |||||||||||||| Sbjct: 58 cttgttggttgccatggttggct 36
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 656 bits (331), Expect = 0.0 Identities = 507/563 (90%), Gaps = 2/563 (0%) Strand = Plus / Minus Query: 6 ctcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttcca 64 ||||||||||||| ||||||||| | |||||||||| |||||||||||||| ||||| | Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538 Query: 65 tacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaa 124 | | | |||||||||||||||| || || | |||||||||| |||||||||||||||||| Sbjct: 537 t-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479 Query: 125 atcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattaca 184 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattaca 419 Query: 185 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 418 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggga 359 Query: 245 aacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 304 |||||||||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| | Sbjct: 358 aacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgc 299 Query: 305 atctggttcaccggattcagggagaagattcagtttaggatagtcactagggcattttgg 364 || |||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 298 atttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgg 239 Query: 365 accacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaa 424 || |||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||| Sbjct: 238 gccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaa 179 Query: 425 acggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccac 484 |||||| | ||||||||||||||| | ||||| |||||||||||| || | || || Sbjct: 178 acggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctac 119 Query: 485 ctggacctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatact 544 ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 118 ttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatact 59 Query: 545 cttgctgggtgccatggttggct 567 |||| ||| |||||||||||||| Sbjct: 58 cttgttggttgccatggttggct 36
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 620 bits (313), Expect = e-174 Identities = 451/497 (90%) Strand = Plus / Minus Query: 71 tgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatg 130 |||||||||||||||| || || | |||||||||| |||||||||||||||||||||||| Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473 Query: 131 cacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 190 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413 Query: 191 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacatt 250 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353 Query: 251 gtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctgg 310 |||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| ||| ||| Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293 Query: 311 ttcaccggattcagggagaagattcagtttaggatagtcactagggcattttggaccact 370 ||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||| || || Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgct 233 Query: 371 tatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggca 430 |||||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| Sbjct: 232 tatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggca 173 Query: 431 agtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggac 490 | ||||||||||||||| | ||||| |||||||||||| || | || || ||||| Sbjct: 172 ggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggac 113 Query: 491 ctgctccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgct 550 |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | Sbjct: 112 ctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgtt 53 Query: 551 gggtgccatggttggct 567 || |||||||||||||| Sbjct: 52 ggttgccatggttggct 36
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 617 bits (311), Expect = e-173 Identities = 475/527 (90%), Gaps = 2/527 (0%) Strand = Plus / Minus Query: 1 ggcgactcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggc 59 |||||||||||||||||| ||||||||| | |||||||||| |||||||||||||| || Sbjct: 529 ggcgactcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgc 470 Query: 60 ttccatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggcca 119 ||| || | |||||||||||||||| || || | |||||||||| ||||||||||||| Sbjct: 469 ttcgatgtgg-tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggcca 411 Query: 120 tagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatca 179 |||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 410 tagaaatcatgcccaagaaggcatgattaggcttcaagagactgaatgacttcaccatca 351 Query: 180 ttacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggcca 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 ttacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggcca 291 Query: 240 cggaaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactga 299 ||| ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| | Sbjct: 290 cgggaaacattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactca 231 Query: 300 gtgacatctggttcaccggattcagggagaagattcagtttaggatagtcactagggcat 359 || ||| |||||||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 230 gtcgcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacat 171 Query: 360 tttggaccacttatgattttacaacgacaagcacctgcgcagactggacgggaaccaccc 419 |||| || |||||||||||||||| ||||||| |||||||||||| ||||||||||| Sbjct: 170 gttgggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccacca 111 Query: 420 gcgaaacggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccc 479 ||||||||||| | ||||||||||||||| | ||||| |||||||||||| || || Sbjct: 110 gcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgcct 51 Query: 480 tccacctggacctgctccagaactaaacccagtatgagaacacaaat 526 || || ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 50 tctacttggacctgctccagaactaaacccaatatgagaacacaaat 4
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 533 bits (269), Expect = e-148 Identities = 400/441 (90%), Gaps = 2/441 (0%) Strand = Plus / Minus Query: 4 gactcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttc 62 ||||||||||||||| ||||||||| | |||||||||| |||||||||||||| ||||| Sbjct: 440 gactcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttc 381 Query: 63 catacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatag 122 || | | |||||||||||||||| || || | ||||||| || |||||||||||||||| Sbjct: 380 gat-ctggtgatggtatcaagattgttgaacagaaaatgaaaaaacgaccttggccatag 322 Query: 123 aaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcatta 182 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 321 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcatta 262 Query: 183 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 202 Query: 243 aaaacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtg 302 |||||||||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| Sbjct: 201 gaaacattgtccaggttgtcacagacggaagtcctgcatccaattgtgcagtactcagtc 142 Query: 303 acatctggttcaccggattcagggagaagattcagtttaggatagtcactagggcatttt 362 ||| |||||||||||||||||||||||||||||| ||||||||||| ||||| || || Sbjct: 141 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacaggtt 82 Query: 363 ggaccacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcg 422 || || |||||||||||||||| ||||||| |||||||||||| ||||||||||| ||| Sbjct: 81 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcg 22 Query: 423 aaacggcaagtgttgtagcag 443 |||||||| | |||||||||| Sbjct: 21 aaacggcaggcgttgtagcag 1
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 515 bits (260), Expect = e-143 Identities = 263/264 (99%) Strand = Plus / Minus Query: 314 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717 Query: 374 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657 Query: 434 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597 Query: 494 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctggg 553 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1596 ctccagaactaaaaccagtatgagaacacaaatgaccacactcttaatactcttgctggg 1537 Query: 554 tgccatggttggcttcttggcttt 577 |||||||||||||||||||||||| Sbjct: 1536 tgccatggttggcttcttggcttt 1513 Score = 482 bits (243), Expect = e-133 Identities = 246/247 (99%) Strand = Plus / Minus Query: 1 ggcgactcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggct 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2277 ggcgactcttgttggaacaagggaaaaagacaaatacataagtaagatgatacattggct 2218 Query: 61 tccatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2217 tccatacagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccat 2158 Query: 121 agaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2157 agaaatcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcat 2098 Query: 181 tacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccac 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2097 tacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccac 2038 Query: 241 ggaaaac 247 ||||||| Sbjct: 2037 ggaaaac 2031 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Minus Query: 247 cattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 306 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 307 ctggttcacc 316 |||||||||| Sbjct: 1877 ctggttcacc 1868
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 504 bits (254), Expect = e-139 Identities = 374/414 (90%) Strand = Plus / Minus Query: 146 ttaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgct 205 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 206 gcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcaca 265 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 266 gacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcagg 325 ||| ||| ||||||||||||| |||||||||| ||| ||| |||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 326 gagaagattcagtttaggatagtcactagggcattttggaccacttatgattttacaacg 385 |||||||||||| ||||||||||| ||||| ||| |||| || |||||||||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175 Query: 386 acaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgttgtagcagtt 445 ||||||| |||||||||||| ||||||||||| |||||| |||| | |||||||||||| Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115 Query: 446 tctagctaacgtgtccttgcagcaactttttccctccacctggacctgctccagaactaa 505 ||| | ||||| |||||||||||| || || || || |||||||||||||||||||| Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 55 Query: 506 acccagtatgagaacacaaatgaccacactcttaatactcttgctgggtgccat 559 ||||| ||||||||||||||| ||||| ||||||||||||||| ||| |||||| Sbjct: 54 acccaatatgagaacacaaataaccacgctcttaatactcttgttggttgccat 1
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 280 bits (141), Expect = 5e-72 Identities = 168/177 (94%) Strand = Plus / Minus Query: 71 tgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaatcatg 130 |||||||||||||||| || || | |||||||||| |||||||||||||||||||||||| Sbjct: 2230 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 2171 Query: 131 cacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 190 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2170 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 2111 Query: 191 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 247 |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 2110 ggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054 Score = 266 bits (134), Expect = 7e-68 Identities = 224/254 (88%) Strand = Plus / Minus Query: 314 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 373 |||||||||||||||||||||||| ||||||||||| ||||| || |||| || ||||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738 Query: 374 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 433 ||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678 Query: 434 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 493 ||||||||||||||| | ||||| |||||||||||| || || || || |||||||| Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 1618 Query: 494 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctggg 553 ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| ||| Sbjct: 1617 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatactcttgttggt 1558 Query: 554 tgccatggttggct 567 |||||||||||||| Sbjct: 1557 tgccatggttggct 1544 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 247 cattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 306 ||||||||||||||||||| || ||| ||||||||||||| |||||||||| ||| |||| Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904 Query: 307 ctggttcacc 316 ||||||||| Sbjct: 1903 ttggttcacc 1894
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 188 bits (95), Expect = 1e-44 Identities = 203/239 (84%) Strand = Plus / Minus Query: 109 gaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaacagactgaatga 168 ||||| ||||| ||||||||||||||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 169 ctgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 228 | ||||| | ||||||||||| ||||| | ||| |||||||| |||||||| ||||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 229 tctcttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatccaatgg 288 ||||||||||| | | ||||||||||||||||||||| || ||| || ||||||| |||| Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 289 tgcagtactgagtgacatctggttcaccggattcagggagaagattcagtttaggatag 347 ||||||||| ||||||||| ||||||||||||||| | ||||||| |||||||| |||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatag 258 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 464 gcagcaactttttccctccacctggacctgctccagaactaaacccagtatgagaacaca 523 ||||||||| |||||||| |||||||||||| ||||||||||||| |||| ||| ||||| Sbjct: 144 gcagcaactctttccctctacctggacctgccccagaactaaacctagtacgaggacaca 85 Query: 524 aatgaccacactcttaatactcttgctgggtgccatggt 562 || ||||||| ||||| || ||| ||| ||||||||| Sbjct: 84 aagcaccacacacttaagacctttggtggttgccatggt 46
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 131 bits (66), Expect = 3e-27 Identities = 252/314 (80%) Strand = Plus / Minus Query: 255 atgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttca 314 ||||||||||| || ||| || |||||||||| |||||||||| || |||||| |||| Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327 Query: 315 ccggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttatg 374 ||| |||||| |||||||| | ||||||| | ||||| || || ||| | | || | Sbjct: 326 ccgtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaag 267 Query: 375 attttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtg 434 | |||||||| ||| | ||||||||||||||| || | | |||| || |||||||| Sbjct: 266 agtttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagaca 207 Query: 435 ttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctgc 494 |||||||||||| | || |||| |||||||||||| || ||||| |||||||||||| Sbjct: 206 ttgtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacctggacctgc 147 Query: 495 tccagaactaaacccagtatgagaacacaaatgaccacactcttaatactcttgctgggt 554 ||||||||||||||||| ||||| | |||||| || ||||||| |||| |||||| | Sbjct: 146 tccagaactaaacccagcatgaggaaacaaataacagcactcttgatacccttgcttgtg 87 Query: 555 gccatggttggctt 568 |||||||||||||| Sbjct: 86 gccatggttggctt 73 Score = 87.7 bits (44), Expect = 4e-14 Identities = 119/144 (82%) Strand = Plus / Minus Query: 98 aatgacaatacgaccttggccatagaaatcatgcacaagaaggcatgattaggcttcaac 157 |||| ||| |||||| ||||||||||||| | |||| ||| |||||||||||| | || Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499 Query: 158 agactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 217 ||| || |||| ||||| | |||||||||||| ||||||||||| |||||| | ||| Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439 Query: 218 gtcgaatttcatctcttggccacg 241 ||||| ||||||||||||||||| Sbjct: 438 gtcgatgttcatctcttggccacg 415
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 434 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 493 ||||||||||||||| || ||||||||||||||||| |||||||| || ||||| || Sbjct: 148 gttgtagcagtttcttgccgtggtgtccttgcagcaactctttccctctacttggacatg 89 Query: 494 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaa 540 ||||||||||| |||| || ||||||||||||||||||||||||| Sbjct: 88 ctccagaactatccccaatacaagaacacaaatgaccacactcttaa 42
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 434 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 493 ||||||||||||||| || | | |||||||||||||| |||||||| || |||||||| Sbjct: 149 gttgtagcagtttcttgccatgatatccttgcagcaactctttccctctacttggacctg 90 Query: 494 ctccagaactaaacccagtatgagaacacaaatgaccacactcttaa 540 ||||||||||| |||| || || ||||||||||| |||||||||| Sbjct: 89 ctccagaactatccccaatacaaggacacaaatgactacactcttaa 43
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 425 acggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccac 484 ||||||| ||||||||||||||| ||| ||| |||||||||||| ||||| || || Sbjct: 141 acggcaaaggttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctac 82 Query: 485 ctggacctgctccagaactaaacccagtatgag 517 || ||||| |||||||| || ||||||||||| Sbjct: 81 ttgcacctgttccagaaccaaccccagtatgag 49
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Minus Query: 434 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 493 ||||||||||||||| ||| ||| |||||||||||| || || || || || ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 73 Query: 494 ctccagaactaaacccagtatgag 517 |||||||| || ||||||||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 48.1 bits (24), Expect = 0.032 Identities = 69/84 (82%) Strand = Plus / Minus Query: 434 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 493 ||||||||||||||| ||| ||| |||||||||||| || || || || || ||||| Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 81 Query: 494 ctccagaactaaacccagtatgag 517 |||||||| || ||||||||||| Sbjct: 80 ttccagaaccaaccccagtatgag 57
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 acaagggaaaaagacaaataca 38 |||||||||||||||||||||| Sbjct: 6908 acaagggaaaaagacaaataca 6887
>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence Length = 211521 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 acaagggaaaaagacaaataca 38 |||||||||||||||||||||| Sbjct: 86367 acaagggaaaaagacaaataca 86346
>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159706 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 aagggaaaaagacaaatacata 40 |||||||||||||||||||||| Sbjct: 85293 aagggaaaaagacaaatacata 85272
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 acaagggaaaaagacaaataca 38 |||||||||||||||||||||| Sbjct: 41781 acaagggaaaaagacaaataca 41802
>emb|AL808121.7| Zebrafish DNA sequence from clone CH211-251B22, complete sequence Length = 154450 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 129 tgcacaagaaggcatgattagg 150 |||||||||||||||||||||| Sbjct: 65514 tgcacaagaaggcatgattagg 65535
>gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome 18, complete sequence Length = 155706 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 acaagggaaaaagacaaatacataa 41 |||||||||||||| |||||||||| Sbjct: 114727 acaagggaaaaagaaaaatacataa 114751
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ggaaaacattgtccatgttgt 261 ||||||||||||||||||||| Sbjct: 33995 ggaaaacattgtccatgttgt 34015
>gb|AC013437.8| Homo sapiens BAC clone RP11-190J23 from 2, complete sequence Length = 167424 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 catgttgtcacagacagaatt 274 ||||||||||||||||||||| Sbjct: 92156 catgttgtcacagacagaatt 92136
>gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, complete sequence Length = 179399 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 acaagggaaaaagacaaatacataa 41 |||||||||||||| |||||||||| Sbjct: 54540 acaagggaaaaagaaaaatacataa 54564
>gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, complete sequence Length = 235709 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 atagaaatcatgcacaagaaggca 142 ||||||||||| |||||||||||| Sbjct: 163342 atagaaatcatacacaagaaggca 163365
>gb|AY587193.1| Araneus ventricosus flagelliform silk protein-1 (Ff1) mRNA, partial cds Length = 1836 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 ctccacctggacctgctcca 498 |||||||||||||||||||| Sbjct: 410 ctccacctggacctgctcca 391
>emb|AL592406.4| Human DNA sequence from clone RP11-322F10 on chromosome 1 Contains the 3' end of a histone deacetylase 1 (HDAC1) pseudogene, the 3' end of the MARK1 gene for MAP/microtubule affinity-regulating kinase, a novel gene, a novel gene (FLJ14146) and a CpG island, complete sequence Length = 121601 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 atagtcactagggcattttg 363 |||||||||||||||||||| Sbjct: 119915 atagtcactagggcattttg 119934
>emb|AL359353.11| Human DNA sequence from clone RP11-124J24 on chromosome 1 Contains the 5' end of a novel gene (FLJ20605) and a CpG island, complete sequence Length = 33915 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 atagtcactagggcattttg 363 |||||||||||||||||||| Sbjct: 314 atagtcactagggcattttg 333
>emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for glucosyltransferase I and glucosyltransferase S Length = 10125 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacagctgatggtatcaaga 84 |||||||||||||||||||| Sbjct: 2450 tacagctgatggtatcaaga 2469
>gb|AC157094.8| Mus musculus 6 BAC RP24-445L10 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176428 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 ttattcaagacaaaatgacaatac 108 |||||||| ||||||||||||||| Sbjct: 158722 ttattcaaaacaaaatgacaatac 158745
>emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 in linkage group 6, complete sequence Length = 171645 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 523 aaatgaccacactcttaatactct 546 ||||||| |||||||||||||||| Sbjct: 51305 aaatgacaacactcttaatactct 51282
>gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, complete sequence Length = 31443 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ggaaaaagacaaatacataa 41 |||||||||||||||||||| Sbjct: 11773 ggaaaaagacaaatacataa 11792
>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17, complete sequence Length = 120315 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 aacagactgaatgactgcac 174 |||||||||||||||||||| Sbjct: 61583 aacagactgaatgactgcac 61602
>gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, complete sequence Length = 163612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ggaaaaagacaaatacataa 41 |||||||||||||||||||| Sbjct: 160156 ggaaaaagacaaatacataa 160175
>gb|AC027271.7| Homo sapiens BAC clone RP11-365H22 from 4, complete sequence Length = 177985 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 tttggaccacttatgatttt 379 |||||||||||||||||||| Sbjct: 57050 tttggaccacttatgatttt 57031
>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds; glycyl-tRNA synthetase (Z195D10.2), ornithine carbamoyltransferase (Z195D10.3), putative gag protein (Z195D10.5), putative SET-domain transcriptional regulator (Z195D10.7), putative oxysterol-binding protein (Z195D10.8), putative polyprotein (Z195D10.9), putative oxysterol-binding protein (Z195D10.10), putative gag-pol polyprotein (Z195D10.11), putative phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12), hypothetical protein (Z195D10.15), putative gag-pol polyprotein (Z195D10.16), putative polyprotein (Z195D10.17), putative retrotransposon protein (Z195D10.18), and prpol (Z195D10.19) genes, complete cds; and putative teosinte branched2 (Z195D10.20) gene, partial cds Length = 141939 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 ctccacctggacctgctccagaac 502 ||||||||| |||||||||||||| Sbjct: 70388 ctccacctgaacctgctccagaac 70411
>gb|AC155288.3| Mus musculus 6 BAC RP24-176C17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168486 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 ttattcaagacaaaatgacaatac 108 |||||||| ||||||||||||||| Sbjct: 129916 ttattcaaaacaaaatgacaatac 129893
>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence Length = 192355 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 acaaatacataagtaagatg 49 |||||||||||||||||||| Sbjct: 111212 acaaatacataagtaagatg 111193
>emb|AL714027.8| Mouse DNA sequence from clone RP23-96E23 on chromosome X, complete sequence Length = 175809 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 gggtgccatggttggcttct 570 |||||||||||||||||||| Sbjct: 5492 gggtgccatggttggcttct 5473
>gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inner membrane protein (LBR) gene, 5' UTR, exons 1 and 2 Length = 5132 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ggaaaaagacaaatacataa 41 |||||||||||||||||||| Sbjct: 4760 ggaaaaagacaaatacataa 4779
>gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferase I (gtfJ) gene, complete cds, and gtfK gene, 5' end Length = 4941 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacagctgatggtatcaaga 84 |||||||||||||||||||| Sbjct: 2450 tacagctgatggtatcaaga 2469
>dbj|AB072340.1| Avena sativa mRNA for leaf thionin Asthi3, complete cds Length = 646 Score = 40.1 bits (20), Expect = 7.9 Identities = 79/96 (82%), Gaps = 2/96 (2%) Strand = Plus / Minus Query: 434 gttgtagcagtttctagctaacgt-gtccttgcagcaactttttccctccacctggacct 492 ||||||||||||||| || || || ||||||||| ||| | |||||||| || || |||| Sbjct: 167 gttgtagcagtttcttgc-aatgtcgtccttgcaacaagtgtttccctctacttgaacct 109 Query: 493 gctccagaactaaacccagtatgagaacacaaatga 528 |||| || |||| |||| |||||| ||||| |||| Sbjct: 108 gctctaggactatccccactatgaggacacacatga 73 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,102,628 Number of Sequences: 3902068 Number of extensions: 5102628 Number of successful extensions: 99682 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 99586 Number of HSP's gapped (non-prelim): 78 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)