ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20a20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ000231.1|HVJ000231 Hordeum vulgare mRNA for expressed sequ... 105 8e-20
2ref|XM_479696.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
3ref|XM_464369.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
7dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
8dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
9dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
10dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
11dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
12dbj|AK072307.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
13dbj|AK068907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
14dbj|AK067059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
15dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic D... 56 6e-05
16gb|AC137586.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.004
17gb|DQ122176.1| Gossypium hirsutum cytochrome P450 DDWF1 mRNA, co... 50 0.004
18ref|XM_479695.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.062
19ref|XM_464360.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.062
20ref|XM_463098.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.062
21gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genom... 46 0.062
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.062
23gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genom... 46 0.062
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.062
25ref|XM_775853.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.24
26ref|XM_479689.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.97
27ref|XM_464368.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.97
28ref|XM_464364.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.97
29ref|NM_193326.1| Oryza sativa (japonica cultivar-group), predic... 42 0.97
30gb|AY532373.1| Ammi majus cytochrome P450 (CYP82H1) mRNA, comple... 42 0.97
31gb|AC121918.3| Mus musculus BAC clone RP24-195D23 from chromosom... 42 0.97
32dbj|AK061866.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.97
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
34dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
35dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.97
36dbj|AK120213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.97
37dbj|AK107034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.97
38dbj|AK100832.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.97
39dbj|AK100062.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.97
40emb|AL773595.10| Mouse DNA sequence from clone RP23-297I16 on ch... 42 0.97
41ref|XM_464659.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.8
42gb|AY217351.1| Manihot esculenta cytochrome P450 protein CYP71E ... 40 3.8
43gb|AC122505.4| Mus musculus BAC clone RP24-419P3 from chromosome... 40 3.8
44gb|AC122524.3| Mus musculus BAC clone RP24-494L9 from chromosome... 40 3.8
45gb|AC002529.1| Homo sapiens BAC clone CTB-161N6 from 7, complete... 40 3.8
46emb|AL445231.8| Human DNA sequence from clone RP11-27K13 on chro... 40 3.8
47emb|AL159154.16| Human DNA sequence from clone RP11-428G23 on ch... 40 3.8
48emb|BX511245.6| Zebrafish DNA sequence from clone CH211-125O16 i... 40 3.8
49gb|AC027287.21| Homo sapiens 12 BAC RP11-616L12 (Roswell Park Ca... 40 3.8
50dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
51gb|AF313490.1|AF313490 Lycianthes rantonnei flavonoid 3',5'-hydr... 40 3.8
52dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 3.8
53emb|BX322571.5| Zebrafish DNA sequence from clone DKEY-260A4 in ... 40 3.8
54dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
55dbj|AK107104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.8 
>emb|AJ000231.1|HVJ000231 Hordeum vulgare mRNA for expressed sequence tag
          Length = 160

 Score =  105 bits (53), Expect = 8e-20
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                       
Query: 31  tacatgcgtgattttggaaccaacaatagtttctccttccgacggacggttagcccaaac 90
           |||| |||||||||||||| |||||||||||||||||||| ||| | ||||| |||||||
Sbjct: 149 tacaagcgtgattttggaatcaacaatagtttctccttcctacgaatggttatcccaaac 90

                            
Query: 91  acctctgtcatatcaat 107
           |||||||||||||||||
Sbjct: 89  acctctgtcatatcaat 73



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 191 cgaggttcataccagggcacatcct 215
           |||||||||||||||||||||||||
Sbjct: 31  cgaggttcataccagggcacatcct 7
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>ref|XM_479696.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1575

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                     
Query: 202  ccagggcacatcctccgtcctgctccaaatggcaagaactg 242
            ||||||||||| || ||||||| ||||||||||||||||||
Sbjct: 1400 ccagggcacattcttcgtcctgatccaaatggcaagaactg 1360
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>ref|XM_464369.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1791

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 201  accagggcacatcctccgtcctgctccaaatgg 233
            ||||||||||||||| |||||||||||||||||
Sbjct: 1436 accagggcacatccttcgtcctgctccaaatgg 1404
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                       
Query: 202    ccagggcacatcctccgtcctgctccaaatggcaagaactg 242
              ||||||||||| || ||||||| ||||||||||||||||||
Sbjct: 314490 ccagggcacattcttcgtcctgatccaaatggcaagaactg 314450



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 85     ccaaacacctctgtcatatcaat 107
              |||||||||||||||||||||||
Sbjct: 303528 ccaaacacctctgtcatatcaat 303506



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 195    gttcataccagggcacatcctccgtcctgctccaaatggcaagaa 239
              ||||||||| ||||| |||||||| || | ||| |||||||||||
Sbjct: 282596 gttcatacctgggcatatcctccgaccagttccgaatggcaagaa 282640
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                             
Query: 205      gggcacatcctccgtcctgctccaaatgg 233
                |||||||||||||||||||||||||||||
Sbjct: 25774960 gggcacatcctccgtcctgctccaaatgg 25774932



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                                
Query: 202      ccagggcacatcctccgtcctgctccaaatgg 233
                ||||||||||||||||| ||||||||||||||
Sbjct: 25713689 ccagggcacatcctccgacctgctccaaatgg 25713720
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                                
Query: 201     accagggcacatcctccgtcctgctccaaatgg 233
               ||||||||||||||| |||||||||||||||||
Sbjct: 4766829 accagggcacatccttcgtcctgctccaaatgg 4766797



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 199     ataccagggcacatcctccgtcctgctccaaatggcaagaact 241
               |||||||| ||||| |||||||| |  ||||||||||||||||
Sbjct: 4724506 ataccaggacacattctccgtccagacccaaatggcaagaact 4724548



 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 201     accagggcacatcctccgtcctgctccaaa 230
               ||||||||||||||| || |||||||||||
Sbjct: 4770838 accagggcacatccttcgccctgctccaaa 4770809



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 202     ccagggcacatcctccgtcctgctccaaa 230
               |||||||||||||| ||||| ||||||||
Sbjct: 4755982 ccagggcacatccttcgtccagctccaaa 4755954



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 198     cataccagggcacatcctccgtcctgctccaaa 230
               |||||||||||||||||| || || ||||||||
Sbjct: 4742823 cataccagggcacatccttcgcccagctccaaa 4742791



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 202     ccagggcacatcctccgtcctgctccaaatggcaag 237
               |||||||||||||| | |||||| ||||| ||||||
Sbjct: 6560929 ccagggcacatccttcttcctgcaccaaaaggcaag 6560894
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>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1115_B01
          Length = 129329

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                              
Query: 201   accagggcacatcctccgtcctgctccaaatgg 233
             ||||||||||||||| |||||||||||||||||
Sbjct: 47419 accagggcacatccttcgtcctgctccaaatgg 47387



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                       
Query: 199  ataccagggcacatcctccgtcctgctccaaatggcaagaact 241
            |||||||| ||||| |||||||| |  ||||||||||||||||
Sbjct: 5096 ataccaggacacattctccgtccagacccaaatggcaagaact 5138



 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 201   accagggcacatcctccgtcctgctccaaa 230
             ||||||||||||||| || |||||||||||
Sbjct: 51428 accagggcacatccttcgccctgctccaaa 51399



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 202   ccagggcacatcctccgtcctgctccaaa 230
             |||||||||||||| ||||| ||||||||
Sbjct: 36572 ccagggcacatccttcgtccagctccaaa 36544



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 198   cataccagggcacatcctccgtcctgctccaaa 230
             |||||||||||||||||| || || ||||||||
Sbjct: 23413 cataccagggcacatccttcgcccagctccaaa 23381
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>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1073_F05
          Length = 124252

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 201  accagggcacatcctccgtcctgctccaaatgg 233
            ||||||||||||||| |||||||||||||||||
Sbjct: 8988 accagggcacatccttcgtcctgctccaaatgg 8956



 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 201   accagggcacatcctccgtcctgctccaaa 230
             ||||||||||||||| || |||||||||||
Sbjct: 12997 accagggcacatccttcgccctgctccaaa 12968
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>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0416A11
          Length = 171519

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                          
Query: 205   gggcacatcctccgtcctgctccaaatgg 233
             |||||||||||||||||||||||||||||
Sbjct: 57164 gggcacatcctccgtcctgctccaaatgg 57136
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>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0450B04
          Length = 153268

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 202   ccagggcacatcctccgtcctgctccaaatggcaagaactg 242
             ||||||||||| || ||||||| ||||||||||||||||||
Sbjct: 24004 ccagggcacattcttcgtcctgatccaaatggcaagaactg 23964



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 85    ccaaacacctctgtcatatcaat 107
             |||||||||||||||||||||||
Sbjct: 13042 ccaaacacctctgtcatatcaat 13020
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>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1300_E01
          Length = 103022

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                      
Query: 202   ccagggcacatcctccgtcctgctccaaatggcaagaactg 242
             ||||||||||| || ||||||| ||||||||||||||||||
Sbjct: 80916 ccagggcacattcttcgtcctgatccaaatggcaagaactg 80876



 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 85    ccaaacacctctgtcatatcaat 107
             |||||||||||||||||||||||
Sbjct: 69954 ccaaacacctctgtcatatcaat 69932



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 195   gttcataccagggcacatcctccgtcctgctccaaatggcaagaa 239
             ||||||||| ||||| |||||||| || | ||| |||||||||||
Sbjct: 49022 gttcatacctgggcatatcctccgaccagttccgaatggcaagaa 49066
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>dbj|AK072307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020N11, full
            insert sequence
          Length = 2010

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                         
Query: 205  gggcacatcctccgtcctgctccaaatgg 233
            |||||||||||||||||||||||||||||
Sbjct: 1688 gggcacatcctccgtcctgctccaaatgg 1660
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>dbj|AK068907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002L07, full
            insert sequence
          Length = 1791

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 201  accagggcacatcctccgtcctgctccaaatgg 233
            ||||||||||||||| |||||||||||||||||
Sbjct: 1436 accagggcacatccttcgtcctgctccaaatgg 1404
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>dbj|AK067059.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090O06, full
            insert sequence
          Length = 2127

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                         
Query: 205  gggcacatcctccgtcctgctccaaatgg 233
            |||||||||||||||||||||||||||||
Sbjct: 1667 gggcacatcctccgtcctgctccaaatgg 1639
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>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0458E02
          Length = 154458

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 202    ccagggcacatcctccgtcctgctccaaatgg 233
              ||||||||||||||||| ||||||||||||||
Sbjct: 137134 ccagggcacatcctccgacctgctccaaatgg 137165
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>gb|AC137586.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0054A16,
              complete sequence
          Length = 164605

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                       
Query: 196    ttcataccagggcacatcctccgtcctgctccaaatggcaagaactgaaaatcattc 252
              ||||| ||||||||||||||||| ||    |||||||||||| ||||| ||||||||
Sbjct: 164184 ttcatcccagggcacatcctccgcccataaccaaatggcaagtactgataatcattc 164240
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>gb|DQ122176.1| Gossypium hirsutum cytochrome P450 DDWF1 mRNA, complete cds
          Length = 1676

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 202  ccagggcacatcctccgtcctgctccaaatggcaagaactgaaaatcat 250
            |||||||||||||||| ||| || ||||||||||| |  ||||||||||
Sbjct: 1376 ccagggcacatcctccttccagccccaaatggcaacagttgaaaatcat 1328
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>ref|XM_479695.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1587

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 85   ccaaacacctctgtcatatcaat 107
            |||||||||||||||||||||||
Sbjct: 1535 ccaaacacctctgtcatatcaat 1513
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>ref|XM_464360.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1560

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 199  ataccagggcacatcctccgtcctgctccaaatggcaagaact 241
            |||||||| ||||| |||||||| |  ||||||||||||||||
Sbjct: 1370 ataccaggacacattctccgtccagacccaaatggcaagaact 1328
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>ref|XM_463098.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 558

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 206 ggcacatcctccgtcctgctccaaatg 232
           ||||||||||||||||||| |||||||
Sbjct: 367 ggcacatcctccgtcctgccccaaatg 341
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>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete
              sequence
          Length = 139771

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 206    ggcacatcctccgtcctgctccaaatg 232
              ||||||||||||||||||| |||||||
Sbjct: 119821 ggcacatcctccgtcctgccccaaatg 119795



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 199   ataccagggcacatcctccgtcctgctccaaa 230
             |||||||| ||||||||||| || ||||||||
Sbjct: 29982 ataccaggacacatcctccgcccagctccaaa 30013
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 206      ggcacatcctccgtcctgctccaaatg 232
                ||||||||||||||||||| |||||||
Sbjct: 21767995 ggcacatcctccgtcctgccccaaatg 21768021



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 199      ataccagggcacatcctccgtcctgctccaaa 230
                |||||||| ||||||||||| || ||||||||
Sbjct: 21857834 ataccaggacacatcctccgcccagctccaaa 21857803
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>gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 genomic sequence, complete
              sequence
          Length = 163108

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 206    ggcacatcctccgtcctgctccaaatg 232
              ||||||||||||||||||| |||||||
Sbjct: 156240 ggcacatcctccgtcctgccccaaatg 156266
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 206      ggcacatcctccgtcctgctccaaatg 232
                ||||||||||||||||||| |||||||
Sbjct: 21761024 ggcacatcctccgtcctgccccaaatg 21761050



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 199      ataccagggcacatcctccgtcctgctccaaa 230
                |||||||| ||||||||||| || ||||||||
Sbjct: 21850863 ataccaggacacatcctccgcccagctccaaa 21850832
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>ref|XM_775853.1| PREDICTED: Strongylocentrotus purpuratus similar to cytochrome
           P450, family 2, subfamily u, polypeptide 1 (LOC575452),
           mRNA
          Length = 1143

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 206 ggcacatcctccgtcctgctccaaatggca 235
           |||| |||||||||||||||||||| ||||
Sbjct: 979 ggcatatcctccgtcctgctccaaaaggca 950
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>ref|XM_479689.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1605

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 195  gttcataccagggcacatcctccgtcctgctccaaatggcaagaa 239
            ||||||||| ||||| |||||||| || | ||| |||||||||||
Sbjct: 1440 gttcatacctgggcatatcctccgaccagttccgaatggcaagaa 1396
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>ref|XM_464368.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1674

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 202  ccagggcacatcctccgtcctgctccaaa 230
            |||||||||||||| ||||| ||||||||
Sbjct: 1361 ccagggcacatccttcgtccagctccaaa 1333
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>ref|XM_464364.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1653

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 198  cataccagggcacatcctccgtcctgctccaaa 230
            |||||||||||||||||| || || ||||||||
Sbjct: 1366 cataccagggcacatccttcgcccagctccaaa 1334
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>ref|NM_193326.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1494

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 136  tcccagtcaaaatggcacacaaggtttgc 164
            ||||||||||||||| ||| |||||||||
Sbjct: 1352 tcccagtcaaaatggtacagaaggtttgc 1324
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>gb|AY532373.1| Ammi majus cytochrome P450 (CYP82H1) mRNA, complete cds
          Length = 1758

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 199  ataccagggcacatcctccgtcctgctccaaatggcaagaactgaaaat 247
            |||||||||||   ||||||||||| ||||||||| |||| || |||||
Sbjct: 1419 ataccagggcatgacctccgtcctgatccaaatggtaagagctcaaaat 1371
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>gb|AC121918.3| Mus musculus BAC clone RP24-195D23 from chromosome 2, complete sequence
          Length = 179270

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   tcttttctcccaaccccaagg 129
             |||||||||||||||||||||
Sbjct: 98001 tcttttctcccaaccccaagg 97981
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>dbj|AK061866.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H09, full
            insert sequence
          Length = 1631

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 136  tcccagtcaaaatggcacacaaggtttgc 164
            ||||||||||||||| ||| |||||||||
Sbjct: 1367 tcccagtcaaaatggtacagaaggtttgc 1339
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 136      tcccagtcaaaatggcacacaaggtttgc 164
                ||||||||||||||| ||| |||||||||
Sbjct: 20152108 tcccagtcaaaatggtacagaaggtttgc 20152080



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 136      tcccagtcaaaatggcacacaaggtttgc 164
                ||||||||||||||| ||| |||||||||
Sbjct: 20122708 tcccagtcaaaatggtacagaaggtttgc 20122680
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>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0051H17
          Length = 187471

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 136   tcccagtcaaaatggcacacaaggtttgc 164
             ||||||||||||||| ||| |||||||||
Sbjct: 58486 tcccagtcaaaatggtacagaaggtttgc 58458



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 136   tcccagtcaaaatggcacacaaggtttgc 164
             ||||||||||||||| ||| |||||||||
Sbjct: 29086 tcccagtcaaaatggtacagaaggtttgc 29058
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>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0065J17
          Length = 139014

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 136    tcccagtcaaaatggcacacaaggtttgc 164
              ||||||||||||||| ||| |||||||||
Sbjct: 120670 tcccagtcaaaatggtacagaaggtttgc 120642
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>dbj|AK120213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039G14, full
            insert sequence
          Length = 2706

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 136  tcccagtcaaaatggcacacaaggtttgc 164
            ||||||||||||||| ||| |||||||||
Sbjct: 2426 tcccagtcaaaatggtacagaaggtttgc 2398
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>dbj|AK107034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-B07, full
            insert sequence
          Length = 1674

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 202  ccagggcacatcctccgtcctgctccaaa 230
            |||||||||||||| ||||| ||||||||
Sbjct: 1361 ccagggcacatccttcgtccagctccaaa 1333
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>dbj|AK100832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123D13, full
            insert sequence
          Length = 1654

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 198  cataccagggcacatcctccgtcctgctccaaa 230
            |||||||||||||||||| || || ||||||||
Sbjct: 1367 cataccagggcacatccttcgcccagctccaaa 1335
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>dbj|AK100062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160F05, full
            insert sequence
          Length = 1760

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 136  tcccagtcaaaatggcacacaaggtttgc 164
            ||||||||||||||| ||| |||||||||
Sbjct: 1496 tcccagtcaaaatggtacagaaggtttgc 1468
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>emb|AL773595.10| Mouse DNA sequence from clone RP23-297I16 on chromosome 2, complete
              sequence
          Length = 173925

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 109    tcttttctcccaaccccaagg 129
              |||||||||||||||||||||
Sbjct: 168499 tcttttctcccaaccccaagg 168479
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>ref|XM_464659.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1762

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 202  ccagggcacatcctccgtcctgctccaaatggcaag 237
            |||||||||||||| | |||||| ||||| ||||||
Sbjct: 1403 ccagggcacatccttcttcctgcaccaaaaggcaag 1368
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>gb|AY217351.1| Manihot esculenta cytochrome P450 protein CYP71E (c15) mRNA, complete
            cds
          Length = 1840

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 202  ccagggcacatcctccgtcctgctccaaatggcaagaactgaaaatca 249
            |||||||| ||||| || || |||||||||||||  |||| |||||||
Sbjct: 1380 ccagggcaaatcctgcggccagctccaaatggcaccaactcaaaatca 1333
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>gb|AC122505.4| Mus musculus BAC clone RP24-419P3 from chromosome 6, complete
           sequence
          Length = 161366

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 100 atatcaatgtcttttctccc 119
           ||||||||||||||||||||
Sbjct: 159 atatcaatgtcttttctccc 140
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>gb|AC122524.3| Mus musculus BAC clone RP24-494L9 from chromosome 6, complete sequence
          Length = 201568

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   atatcaatgtcttttctccc 119
             ||||||||||||||||||||
Sbjct: 55476 atatcaatgtcttttctccc 55495
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>gb|AC002529.1| Homo sapiens BAC clone CTB-161N6 from 7, complete sequence
          Length = 136755

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   cgtcctgctccaaatggcaa 236
             ||||||||||||||||||||
Sbjct: 15525 cgtcctgctccaaatggcaa 15544
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>emb|AL445231.8| Human DNA sequence from clone RP11-27K13 on chromosome 1 Contains the
             3' end of the PTGFRN gene for prostaglandin F2 receptor
             negative regulator, the IGSF2 gene for immunoglobulin
             superfamily member 2, a novel gene (FLJ42338), the 5' end
             of the TTF2 gene for RNA polymerase II transcription
             termination factor and a CpG island, complete sequence
          Length = 126847

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     atttagcttagtttaatttt 24
             ||||||||||||||||||||
Sbjct: 64514 atttagcttagtttaatttt 64495
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>emb|AL159154.16| Human DNA sequence from clone RP11-428G23 on chromosome 13 Contains
             part of a novel gene (KIAA0916), complete sequence
          Length = 124964

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     caatatttagcttagtttaatttt 24
             |||||||||| |||||||||||||
Sbjct: 13718 caatatttagtttagtttaatttt 13741
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>emb|BX511245.6| Zebrafish DNA sequence from clone CH211-125O16 in linkage group 17,
             complete sequence
          Length = 96687

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     atttagcttagtttaatttt 24
             ||||||||||||||||||||
Sbjct: 48870 atttagcttagtttaatttt 48889
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>gb|AC027287.21| Homo sapiens 12 BAC RP11-616L12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 202703

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      caatatttagcttagtttaatttt 24
              |||||||||||||| |||||||||
Sbjct: 198276 caatatttagcttattttaatttt 198299
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                                
Query: 205      gggcacatcctccgtcctgctccaaatggcaagaactgaaaatcattc 252
                |||||||||||||| ||    |||||||||||| ||||| ||||||||
Sbjct: 15545812 gggcacatcctccgcccataaccaaatggcaagtactgataatcattc 15545859
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>gb|AF313490.1|AF313490 Lycianthes rantonnei flavonoid 3',5'-hydroxylase mRNA, complete cds
          Length = 1735

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 211  atcctccgtcctgctccaaatggcaagaactgaaaatcattccc 254
            ||||| |||||||| |||||||| |  |||| ||||||||||||
Sbjct: 1390 atccttcgtcctgcaccaaatggaatcaactcaaaatcattccc 1347
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 176     cgacattcgcgattccgagg 195
               ||||||||||||||||||||
Sbjct: 4157472 cgacattcgcgattccgagg 4157491
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>emb|BX322571.5| Zebrafish DNA sequence from clone DKEY-260A4 in linkage group 17,
             complete sequence
          Length = 58025

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     atttagcttagtttaatttt 24
             ||||||||||||||||||||
Sbjct: 53832 atttagcttagtttaatttt 53813
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>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1307A11
          Length = 131538

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 202    ccagggcacatcctccgtcctgctccaaatggcaag 237
              |||||||||||||| | |||||| ||||| ||||||
Sbjct: 121542 ccagggcacatccttcttcctgcaccaaaaggcaag 121507
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>dbj|AK107104.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-122-A09, full
            insert sequence
          Length = 1762

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 202  ccagggcacatcctccgtcctgctccaaatggcaag 237
            |||||||||||||| | |||||| ||||| ||||||
Sbjct: 1403 ccagggcacatccttcttcctgcaccaaaaggcaag 1368


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,435,287
Number of Sequences: 3902068
Number of extensions: 2435287
Number of successful extensions: 43218
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 43014
Number of HSP's gapped (non-prelim): 204
length of query: 292
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 270
effective length of database: 17,147,199,772
effective search space: 4629743938440
effective search space used: 4629743938440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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