ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19p21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MYST1_HUMAN (Q9H7Z6) Probable histone acetyltransferase MYST1 (E... 30 6.9
2FRQ_CRESP (Q00586) Frequency clock protein 30 9.0

>MYST1_HUMAN (Q9H7Z6) Probable histone acetyltransferase MYST1 (EC 2.3.1.48)|
           (MYST protein 1) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
           1) (hMOF)
          Length = 458

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 23/74 (31%), Positives = 31/74 (41%)
 Frame = -2

Query: 589 GEGLDAPEQSRAPQGTKFIPYSQFPPKMARKDCCTYAMTPAMGVPESMQNVHSCENWLPR 410
           GEG   P ++ A +GT   P    PP            TPA G PE    V   E +L R
Sbjct: 19  GEGEPGPGENAAAEGTAPSPGRVSPP------------TPARGEPE--VTVEIGETYLCR 64

Query: 409 KVMSAWRVAGIVHA 368
           +  S W  A ++ +
Sbjct: 65  RPDSTWHSAEVIQS 78



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>FRQ_CRESP (Q00586) Frequency clock protein|
          Length = 1015

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +1

Query: 232 KIMAVTRSQAIKLGQQGGTHA*LQQTILSPGPALCLRTHLRST---PPMHEQFQRRATRS 402
           K + V R + I  G+ GG H    Q  L+P  ++ L     ++    P  +Q Q++  + 
Sbjct: 308 KKLVVRRLEQIFTGKIGGKHVRRTQPTLTPAVSIALPAVQATSIDFSPQQQQQQQQQQQQ 367

Query: 403 SPSSEANSRTSARFALIQVHPLQES 477
            P S   +   A F+ +   PL+E+
Sbjct: 368 QPKSNFITNPGATFSSVP-EPLREA 391


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,687,080
Number of Sequences: 219361
Number of extensions: 2304801
Number of successful extensions: 5723
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5721
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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