Clone Name | rbasd19p07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK069184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009A17, full insert sequence Length = 1154 Score = 323 bits (163), Expect = 3e-85 Identities = 286/327 (87%) Strand = Plus / Minus Query: 176 gaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccactccc 235 |||||||||||| |||||||| |||||||||||||||||||| ||||| | || ||||| Sbjct: 729 gaacaccacattggtgatgtccgggaacttctccttgatggccgccttgatcccgctccc 670 Query: 236 gatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagcacctc 295 ||||||||| ||||| |||||| | |||||||||||||||||||| ||||| | |||||| Sbjct: 669 gatggactcggggccttcgtacctcaccaggcagtcctcgccgtcgacggcgaccacctc 610 Query: 296 cacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttcaccgc 355 ||| |||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||| Sbjct: 609 cacgctcccgccgtagttggcgatcgccggccgcagtatgtccaggtggccgttcaccgc 550 Query: 356 ctcaggcgtcgtctcttcgggttgctggtccccgtcgaacacctggcggatgtccttgat 415 || ||||| | ||| | || ||||| || ||||||||||||||||||| || || | Sbjct: 549 ctggggcgttggctccgccggctgctgatcgtcgtcgaacacctggcggatatcttttac 490 Query: 416 ggcgtcaccgaacttctccttgagcactcgctcgatgcccatgttcatcgtcgtcgtcga 475 |||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 489 ggcgtcgccgaacttctccttgagcacgcgctcgatgcccatcttcatcgtcgtcgtcga 430 Query: 476 gctgggacaactgctgcacgccccttc 502 |||||| || |||| |||||| ||||| Sbjct: 429 gctggggcagctgccgcacgctccttc 403
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 210 bits (106), Expect = 3e-51 Identities = 163/182 (89%) Strand = Plus / Minus Query: 176 gaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccactccc 235 |||||||||||| |||||||| |||||||||||||||||||| ||||| | || ||||| Sbjct: 11245910 gaacaccacattggtgatgtccgggaacttctccttgatggccgccttgatcccgctccc 11245851 Query: 236 gatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagcacctc 295 ||||||||| ||||| |||||| | |||||||||||||||||||| ||||| | |||||| Sbjct: 11245850 gatggactcggggccttcgtacctcaccaggcagtcctcgccgtcgacggcgaccacctc 11245791 Query: 296 cacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttcaccgc 355 ||| |||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||| Sbjct: 11245790 cacgctcccgccgtagttggcgatcgccggccgcagtatgtccaggtggccgttcaccgc 11245731 Query: 356 ct 357 || Sbjct: 11245730 ct 11245729 Score = 137 bits (69), Expect = 4e-29 Identities = 99/109 (90%) Strand = Plus / Minus Query: 388 cgtcgaacacctggcggatgtccttgatggcgtcaccgaacttctccttgagcactcgct 447 ||||||||||||||||||| || || | |||||| |||||||||||||||||||| |||| Sbjct: 11245624 cgtcgaacacctggcggatatcttttacggcgtcgccgaacttctccttgagcacgcgct 11245565 Query: 448 cgatgcccatgttcatcgtcgtcgtcgagctgggacaactgctgcacgc 496 |||||||||| ||||||||||||||||||||||| || |||| |||||| Sbjct: 11245564 cgatgcccatcttcatcgtcgtcgtcgagctggggcagctgccgcacgc 11245516
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 210 bits (106), Expect = 3e-51 Identities = 163/182 (89%) Strand = Plus / Minus Query: 176 gaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccactccc 235 |||||||||||| |||||||| |||||||||||||||||||| ||||| | || ||||| Sbjct: 24863 gaacaccacattggtgatgtccgggaacttctccttgatggccgccttgatcccgctccc 24804 Query: 236 gatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagcacctc 295 ||||||||| ||||| |||||| | |||||||||||||||||||| ||||| | |||||| Sbjct: 24803 gatggactcggggccttcgtacctcaccaggcagtcctcgccgtcgacggcgaccacctc 24744 Query: 296 cacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttcaccgc 355 ||| |||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||| Sbjct: 24743 cacgctcccgccgtagttggcgatcgccggccgcagtatgtccaggtggccgttcaccgc 24684 Query: 356 ct 357 || Sbjct: 24683 ct 24682 Score = 137 bits (69), Expect = 4e-29 Identities = 99/109 (90%) Strand = Plus / Minus Query: 388 cgtcgaacacctggcggatgtccttgatggcgtcaccgaacttctccttgagcactcgct 447 ||||||||||||||||||| || || | |||||| |||||||||||||||||||| |||| Sbjct: 24577 cgtcgaacacctggcggatatcttttacggcgtcgccgaacttctccttgagcacgcgct 24518 Query: 448 cgatgcccatgttcatcgtcgtcgtcgagctgggacaactgctgcacgc 496 |||||||||| ||||||||||||||||||||||| || |||| |||||| Sbjct: 24517 cgatgcccatcttcatcgtcgtcgtcgagctggggcagctgccgcacgc 24469
>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0085H08, from chromosome 3, complete sequence Length = 126708 Score = 210 bits (106), Expect = 3e-51 Identities = 163/182 (89%) Strand = Plus / Plus Query: 176 gaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccactccc 235 |||||||||||| |||||||| |||||||||||||||||||| ||||| | || ||||| Sbjct: 35138 gaacaccacattggtgatgtccgggaacttctccttgatggccgccttgatcccgctccc 35197 Query: 236 gatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagcacctc 295 ||||||||| ||||| |||||| | |||||||||||||||||||| ||||| | |||||| Sbjct: 35198 gatggactcggggccttcgtacctcaccaggcagtcctcgccgtcgacggcgaccacctc 35257 Query: 296 cacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttcaccgc 355 ||| |||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||| Sbjct: 35258 cacgctcccgccgtagttggcgatcgccggccgcagtatgtccaggtggccgttcaccgc 35317 Query: 356 ct 357 || Sbjct: 35318 ct 35319 Score = 137 bits (69), Expect = 4e-29 Identities = 99/109 (90%) Strand = Plus / Plus Query: 388 cgtcgaacacctggcggatgtccttgatggcgtcaccgaacttctccttgagcactcgct 447 ||||||||||||||||||| || || | |||||| |||||||||||||||||||| |||| Sbjct: 35424 cgtcgaacacctggcggatatcttttacggcgtcgccgaacttctccttgagcacgcgct 35483 Query: 448 cgatgcccatgttcatcgtcgtcgtcgagctgggacaactgctgcacgc 496 |||||||||| ||||||||||||||||||||||| || |||| |||||| Sbjct: 35484 cgatgcccatcttcatcgtcgtcgtcgagctggggcagctgccgcacgc 35532
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 210 bits (106), Expect = 3e-51 Identities = 163/182 (89%) Strand = Plus / Minus Query: 176 gaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccactccc 235 |||||||||||| |||||||| |||||||||||||||||||| ||||| | || ||||| Sbjct: 11242673 gaacaccacattggtgatgtccgggaacttctccttgatggccgccttgatcccgctccc 11242614 Query: 236 gatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagcacctc 295 ||||||||| ||||| |||||| | |||||||||||||||||||| ||||| | |||||| Sbjct: 11242613 gatggactcggggccttcgtacctcaccaggcagtcctcgccgtcgacggcgaccacctc 11242554 Query: 296 cacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttcaccgc 355 ||| |||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||| Sbjct: 11242553 cacgctcccgccgtagttggcgatcgccggccgcagtatgtccaggtggccgttcaccgc 11242494 Query: 356 ct 357 || Sbjct: 11242493 ct 11242492 Score = 137 bits (69), Expect = 4e-29 Identities = 99/109 (90%) Strand = Plus / Minus Query: 388 cgtcgaacacctggcggatgtccttgatggcgtcaccgaacttctccttgagcactcgct 447 ||||||||||||||||||| || || | |||||| |||||||||||||||||||| |||| Sbjct: 11242387 cgtcgaacacctggcggatatcttttacggcgtcgccgaacttctccttgagcacgcgct 11242328 Query: 448 cgatgcccatgttcatcgtcgtcgtcgagctgggacaactgctgcacgc 496 |||||||||| ||||||||||||||||||||||| || |||| |||||| Sbjct: 11242327 cgatgcccatcttcatcgtcgtcgtcgagctggggcagctgccgcacgc 11242279
>gb|AY110393.1| Zea mays CL5132_1 mRNA sequence Length = 844 Score = 180 bits (91), Expect = 3e-42 Identities = 163/187 (87%) Strand = Plus / Plus Query: 172 gggtgaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccac 231 |||| ||||||||| | |||||||| ||||| |||||||||||||| ||||| | || | Sbjct: 285 gggtaaacaccacactggtgatgtccgggaatttctccttgatggccgccttgataccgc 344 Query: 232 tcccgatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagca 291 | |||||||| || || ||||||||| | ||||||||||||||||| || ||||| | || Sbjct: 345 tgccgatggattccggcccgtcgtacctcaccaggcagtcctcgccatcgacggccaaca 404 Query: 292 cctccacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttca 351 | ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 405 catccacgctcccgccgtagttcgcgatcgctggccgcagtatgtccaggtgccggttca 464 Query: 352 ccgcctc 358 ||||||| Sbjct: 465 ccgcctc 471 Score = 123 bits (62), Expect = 6e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 389 gtcgaacacctggcggatgtccttgatggcgtcaccgaacttctccttgagcactcgctc 448 |||||||||||| ||||| ||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 502 gtcgaacacctgacggatttccttgaaagcgtcgccgaacttctccttgagcacacgctc 561 Query: 449 gatgcccatgttcatcgtcgtcgtcgagctgggacaactgctgcacgccccttc 502 ||||||||| ||||||||||||||| ||||||| || |||| ||| || ||||| Sbjct: 562 gatgcccatattcatcgtcgtcgtcaagctggggcagctgccgcaagctccttc 615
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 466 tcgtcgtcgagctgggacaact 487 |||||||||||||||||||||| Sbjct: 3863391 tcgtcgtcgagctgggacaact 3863412
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 466 tcgtcgtcgagctgggacaact 487 |||||||||||||||||||||| Sbjct: 3864065 tcgtcgtcgagctgggacaact 3864086
>gb|AY840979.1| Bifidobacterium breve prophage-like element, complete sequence Length = 28155 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 195 tcggggaacttctccttgatgg 216 |||||||||||||||||||||| Sbjct: 19232 tcggggaacttctccttgatgg 19253
>gb|AC113550.11| Mus musculus chromosome 6, clone RP23-275L12, complete sequence Length = 203865 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 caaaaattactccatttcatt 26 ||||||||||||||||||||| Sbjct: 51486 caaaaattactccatttcatt 51466
>emb|AL357493.8| Human DNA sequence from clone RP11-439A17 on chromosome 1 Contains four novel genes, a novel gene (MGC57827), a ribosomal protein L22 (RPL22) pseudogene, a histone 2 H3c (HIST2H3C) pseudogene, the HIST2H2BB gene for histone 2 H2bb, the FCGR1B gene for Fc fragment of IgG high affinity Ib receptor for (CD64) and three CpG islands, complete sequence Length = 189539 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 tttttctacccaaaggaaaca 66 ||||||||||||||||||||| Sbjct: 114419 tttttctacccaaaggaaaca 114439
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 189 gtgatgtcggggaacttctccttgatggc 217 |||||||| ||| |||||||||||||||| Sbjct: 739405 gtgatgtctgggtacttctccttgatggc 739377
>gb|AY566569.1| Felis catus myocilin mRNA, complete cds Length = 2125 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 tcgaacacctggcggatgtcc 410 ||||||||||||||||||||| Sbjct: 963 tcgaacacctggcggatgtcc 943
>dbj|AP004542.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102a, complete sequence Length = 54472 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 aaaatcttgttgtatttcgta 115 ||||||||||||||||||||| Sbjct: 25196 aaaatcttgttgtatttcgta 25216
>gb|AC132127.3| Mus musculus BAC clone RP23-408B15 from chromosome 16, complete sequence Length = 182676 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccatttcattttccatcg 34 |||||||||||||||||||| Sbjct: 162667 ctccatttcattttccatcg 162686
>ref|XM_380597.1| Gibberella zeae PH-1 chromosome 1 METK_NEUCR S-adenosylmethionine synthetase (Methionine adenosyltransferase) (AdoMet synthetase) (FG00421.1) partial mRNA Length = 1209 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 gatgtccttgatggcgtcac 423 |||||||||||||||||||| Sbjct: 288 gatgtccttgatggcgtcac 269
>gb|AC102083.12| Mus musculus chromosome 16, clone RP23-269L18, complete sequence Length = 205875 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctccatttcattttccatcg 34 |||||||||||||||||||| Sbjct: 11038 ctccatttcattttccatcg 11057
>emb|AL158012.14| Human DNA sequence from clone RP11-157A10 on chromosome 9 Contains part of the gene for a novel GLI Kruppel family member zinc finger protein (FLJ38999), complete sequence Length = 124474 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ttttctacccaaaggaaaca 66 |||||||||||||||||||| Sbjct: 62534 ttttctacccaaaggaaaca 62515
>emb|BX004803.11| Zebrafish DNA sequence from clone CH211-119C20 in linkage group 20 Contains a novel gene simialr to human and mouse CASKIN2 (CASK interacting protein 2), a novel gene for a nucleoside-diphosphate kinase (wu:fk59e05) and a CpG island, complete sequence Length = 167376 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tactccatttcattttccat 32 |||||||||||||||||||| Sbjct: 166726 tactccatttcattttccat 166707
>emb|CR383677.15| Zebrafish DNA sequence from clone CH211-157P16 in linkage group 12, complete sequence Length = 164387 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tactccatttcattttccat 32 |||||||||||||||||||| Sbjct: 125318 tactccatttcattttccat 125337
>gb|DQ397877.1| Cenarchaeum symbiosum clone C06F03, complete sequence Length = 37987 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 cgctcgatgcccatgttcat 463 |||||||||||||||||||| Sbjct: 13103 cgctcgatgcccatgttcat 13122
>gb|AY122115.1| Drosophila melanogaster GH17337 full insert cDNA Length = 3398 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 2089 tcggggaacttctccttgat 2070
>ref|NM_167656.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RI, transcript variant I (Pfrx), mRNA Length = 2980 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 1684 tcggggaacttctccttgat 1665
>ref|NM_167655.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RH, transcript variant H (Pfrx), mRNA Length = 2987 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 1691 tcggggaacttctccttgat 1672
>ref|NM_167654.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RF, transcript variant F (Pfrx), mRNA Length = 2919 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 1623 tcggggaacttctccttgat 1604
>ref|NM_167653.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RE, transcript variant E (Pfrx), mRNA Length = 3184 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 1888 tcggggaacttctccttgat 1869
>ref|NM_167652.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RD, transcript variant D (Pfrx), mRNA Length = 2990 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 1694 tcggggaacttctccttgat 1675
>ref|NM_167651.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RA, transcript variant A (Pfrx), mRNA Length = 2983 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 1687 tcggggaacttctccttgat 1668
>ref|NM_058104.4| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RB, transcript variant B (Pfrx), mRNA Length = 3383 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 2087 tcggggaacttctccttgat 2068
>ref|NM_058103.2| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RG, transcript variant G (Pfrx), mRNA Length = 2930 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 2087 tcggggaacttctccttgat 2068
>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone BACR27L16, complete sequence Length = 182623 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 110731 tcggggaacttctccttgat 110712
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 49211 tcggggaacttctccttgat 49192
>emb|CR385044.5| Zebrafish DNA sequence from clone CH211-51N14 in linkage group 20, complete sequence Length = 59170 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tactccatttcattttccat 32 |||||||||||||||||||| Sbjct: 1350 tactccatttcattttccat 1331
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete sequence Length = 346474 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 154977 tcggggaacttctccttgat 154958
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 accaggcagtcctcgccgtc 280 |||||||||||||||||||| Sbjct: 3198140 accaggcagtcctcgccgtc 3198159
>dbj|AB023511.1| Drosophila melanogaster mRNA for 6-phosphofructo 2-kinase/fructose 2,6-bisphosphatase long form, complete cds Length = 2939 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 2087 tcggggaacttctccttgat 2068
>dbj|AB023510.1| Drosophila melanogaster mRNA for 6-phosphofructo 2-kinase/fructose 2,6-bisphosphatase short form, complete cds Length = 2701 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcggggaacttctccttgat 214 |||||||||||||||||||| Sbjct: 1394 tcggggaacttctccttgat 1375 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,471,123 Number of Sequences: 3902068 Number of extensions: 3471123 Number of successful extensions: 94070 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93752 Number of HSP's gapped (non-prelim): 315 length of query: 507 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 485 effective length of database: 17,147,199,772 effective search space: 8316391889420 effective search space used: 8316391889420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)