Clone Name | rbasd19p04 |
---|---|
Clone Library Name | barley_pub |
>gb|AY377991.1| Triticum aestivum chloroplast-localized Ptr ToxA-binding protein1 (TaThf1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1130 Score = 1023 bits (516), Expect = 0.0 Identities = 634/672 (94%), Gaps = 9/672 (1%) Strand = Plus / Minus Query: 55 ttcatatattgtcaacgaagtgaagaaaacggtacattcgaacacagagaaggagaaatt 114 ||||||||||||||| |||||||||||||| | |||||||||||||| ||||||||||| Sbjct: 1099 ttcatatattgtcaaataagtgaagaaaacgatccattcgaacacagacaaggagaaatt 1040 Query: 115 acaaaataccaac-----tactgcgaataatctggatctttttgtaccgccgagtactac 169 |||||||||||| |||| |||||||||||||||||||||||| || ||||||||| Sbjct: 1039 acaaaataccaaactcaatactacgaataatctggatctttttgtacggcggagtactac 980 Query: 170 ac-cacgctaagagcagccaaagatgcccccgatagttctcaacgctatccagatgt--a 226 || | ||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 979 actcgcgcgaagagcagccaaagatgcccccgatagttctcaacgctatccagatgtgta 920 Query: 227 taactgttaatatctgttatccggacaagctctcctctggggaaaggttgagttaatgct 286 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 919 taactgttaatatctgttatccggacaagctgtcctctggggaaaggttgagttaatgct 860 Query: 287 tcaagggataagtgcttccatcgaattttgcaacagcctcgttcggcttgggcgtctcca 346 |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 859 tcaagggataagcgcttccatcgaattttgcaacagcctcattcggcttgggcgtctcca 800 Query: 347 atctctctgctctcttcttcttttccctctcgacgtattccttaagaagttccttggctt 406 ||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 799 atctctcctctctcttcttcttttccctctcgatgtattccttgagaagttccttggctt 740 Query: 407 gaaccaatttcgacagtaagttgcggtaaacgtcaaggtctctatccacgcnnnnnnnat 466 ||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 739 gaaccaatttcgagagtaagttgcggtaaacgtcaaggtctctatccacgctctttttat 680 Query: 467 tgatgtttagagcagcgcaaagcttgtccagtacggttggctccgtcgcatttgagagct 526 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 tgatgtttagagcagcacaaagcttgtccagtacggttggctccgtcgcatttgagagct 620 Query: 527 caagcaaacggaacaagccaacagcaaagaaccggctgtagcctgaagtttcccttaccc 586 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 619 caagcaaacggaacaagccaacagcaaagaaccggctgtag-ctgaagtttcccttaccc 561 Query: 587 tgggccctttctgatatatctttcagaatggactctatttccccatctctggaagaaaat 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tgggccctttctgatatatctttcagaatggactctatttccccatctctggaagaaaat 501 Query: 647 tcaactaacagattaccattttgtgagcgtgcccactcttccatcctttgtgcatcagcc 706 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 tcaactaacaagttaccattttgtgagcgtgcccactcttccatcctttgtgcatcagcc 441 Query: 707 ctgtattgctca 718 |||||||||||| Sbjct: 440 ctgtattgctca 429
>gb|AY736122.1| Triticum aestivum chloroplast inositol phosphatase-like protein mRNA, complete cds; nuclear gene for chloroplast product Length = 909 Score = 743 bits (375), Expect = 0.0 Identities = 429/448 (95%), Gaps = 1/448 (0%) Strand = Plus / Minus Query: 271 aggttgagttaatgcttcaagggataagtgcttccatcgaattttgcaacagcctcgttc 330 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 909 aggttgagttaatgcttcaagggataagcgcttccatcgaattttgcaacagcctcattc 850 Query: 331 ggcttgggcgtctccaatctctctgctctcttcttcttttccctctcgacgtattcctta 390 ||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||| Sbjct: 849 ggcttgggcgtctccaatctctcctctctcttcttcttttccctcttgatgtattccttg 790 Query: 391 agaagttccttggcttgaaccaatttcgacagtaagttgcggtaaacgtcaaggtctcta 450 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 789 agaagttccttggcttgaaccaatttcgagagtaagttgcggtaaacgtcaaggtctcta 730 Query: 451 tccacgcnnnnnnnattgatgtttagagcagcgcaaagcttgtccagtacggttggctcc 510 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 729 tccacgctctttttattgatgtttagagcagcacaaagcttgtccagtacggttggctcc 670 Query: 511 gtcgcatttgagagctcaagcaaacggaacaagccaacagcaaagaaccggctgtagcct 570 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 669 gtcgcatttgagagctcaagcaaacggaacaagccaacagcaaagaaccggctgtag-ct 611 Query: 571 gaagtttcccttaccctgggccctttctgatatatctttcagaatggactctatttcccc 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 gaagtttcccttaccctgggccctttctgatatatctttcagaatggactctatttcccc 551 Query: 631 atctctggaagaaaattcaactaacagattaccattttgtgagcgtgcccactcttccat 690 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 550 atctctggaagaaaattcaactaacaagttaccattttgtgagcgtgcccactcttccat 491 Query: 691 cctttgtgcatcagccctgtattgctca 718 |||||||||||||||||||||||||||| Sbjct: 490 cctttgtgcatcagccctgtattgctca 463
>ref|XM_478693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1153 Score = 329 bits (166), Expect = 7e-87 Identities = 313/363 (86%), Gaps = 1/363 (0%) Strand = Plus / Minus Query: 356 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 415 ||||||||||||||||||| || ||||||||||| ||||||||||| || || ||||||| Sbjct: 886 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 827 Query: 416 tcgacagtaagttgcggtaaacgtcaaggtctctatccacgcnnnnnnnattgatgttta 475 | || |||| ||| |||||||| || || || || || || | |||||||||| Sbjct: 826 tggagagtatgttccggtaaacatcgagatccctgtcgacacttcttttgttgatgttta 767 Query: 476 gagcagcgcaaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaac 535 ||||||||||||||||||| |||| ||||||||| || ||||||| ||||||||||||| Sbjct: 766 gagcagcgcaaagcttgtctagtatggttggctctgttgcatttgcaagctcaagcaaac 707 Query: 536 ggaacaagccaacagcaaagaaccggctgtagcctgaagtttcccttaccctgggccctt 595 ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 706 ggaacaagccaactgcaaagaaccggctgtagc-tgaagcttcccttaccctgggccctt 648 Query: 596 tctgatatatctttcagaatggactctatttccccatctctggaagaaaattcaactaac 655 ||||| |||||||||||||||| ||||||||| |||||| |||| ||||| |||||||| Sbjct: 647 tctgaaatatctttcagaatggcctctatttctccatctttggatgaaaactcaactaaa 588 Query: 656 agattaccattttgtgagcgtgcccactcttccatcctttgtgcatcagccctgtattgc 715 ||||||||| || || || ||||||||||||||| ||||||| ||||| ||||||||| Sbjct: 587 gaattaccattctgggaacgagcccactcttccatcttttgtgcgtcagctctgtattgc 528 Query: 716 tca 718 ||| Sbjct: 527 tca 525
>gb|AY224446.1| Oryza sativa (japonica cultivar-group) isolate 23045 inositol phosphatase-like protein mRNA, complete cds Length = 864 Score = 329 bits (166), Expect = 7e-87 Identities = 313/363 (86%), Gaps = 1/363 (0%) Strand = Plus / Minus Query: 356 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 415 ||||||||||||||||||| || ||||||||||| ||||||||||| || || ||||||| Sbjct: 787 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 728 Query: 416 tcgacagtaagttgcggtaaacgtcaaggtctctatccacgcnnnnnnnattgatgttta 475 | || |||| ||| |||||||| || || || || || || | |||||||||| Sbjct: 727 tggagagtatgttccggtaaacatcgagatccctgtcgacacttcttttgttgatgttta 668 Query: 476 gagcagcgcaaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaac 535 ||||||||||||||||||| |||| ||||||||| || ||||||| ||||||||||||| Sbjct: 667 gagcagcgcaaagcttgtctagtatggttggctctgttgcatttgcaagctcaagcaaac 608 Query: 536 ggaacaagccaacagcaaagaaccggctgtagcctgaagtttcccttaccctgggccctt 595 ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 607 ggaacaagccaactgcaaagaaccggctgtagc-tgaagcttcccttaccctgggccctt 549 Query: 596 tctgatatatctttcagaatggactctatttccccatctctggaagaaaattcaactaac 655 ||||| |||||||||||||||| ||||||||| |||||| |||| ||||| |||||||| Sbjct: 548 tctgaaatatctttcagaatggcctctatttctccatctttggatgaaaactcaactaaa 489 Query: 656 agattaccattttgtgagcgtgcccactcttccatcctttgtgcatcagccctgtattgc 715 ||||||||| || || || ||||||||||||||| ||||||| ||||| ||||||||| Sbjct: 488 gaattaccattctgggaacgagcccactcttccatcttttgtgcgtcagctctgtattgc 429 Query: 716 tca 718 ||| Sbjct: 428 tca 426
>dbj|AK064914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M13, full insert sequence Length = 1152 Score = 329 bits (166), Expect = 7e-87 Identities = 313/363 (86%), Gaps = 1/363 (0%) Strand = Plus / Minus Query: 356 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 415 ||||||||||||||||||| || ||||||||||| ||||||||||| || || ||||||| Sbjct: 885 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 826 Query: 416 tcgacagtaagttgcggtaaacgtcaaggtctctatccacgcnnnnnnnattgatgttta 475 | || |||| ||| |||||||| || || || || || || | |||||||||| Sbjct: 825 tggagagtatgttccggtaaacatcgagatccctgtcgacacttcttttgttgatgttta 766 Query: 476 gagcagcgcaaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaac 535 ||||||||||||||||||| |||| ||||||||| || ||||||| ||||||||||||| Sbjct: 765 gagcagcgcaaagcttgtctagtatggttggctctgttgcatttgcaagctcaagcaaac 706 Query: 536 ggaacaagccaacagcaaagaaccggctgtagcctgaagtttcccttaccctgggccctt 595 ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 705 ggaacaagccaactgcaaagaaccggctgtagc-tgaagcttcccttaccctgggccctt 647 Query: 596 tctgatatatctttcagaatggactctatttccccatctctggaagaaaattcaactaac 655 ||||| |||||||||||||||| ||||||||| |||||| |||| ||||| |||||||| Sbjct: 646 tctgaaatatctttcagaatggcctctatttctccatctttggatgaaaactcaactaaa 587 Query: 656 agattaccattttgtgagcgtgcccactcttccatcctttgtgcatcagccctgtattgc 715 ||||||||| || || || ||||||||||||||| ||||||| ||||| ||||||||| Sbjct: 586 gaattaccattctgggaacgagcccactcttccatcttttgtgcgtcagctctgtattgc 527 Query: 716 tca 718 ||| Sbjct: 526 tca 524
>gb|AY104484.1| Zea mays PCO107854 mRNA sequence Length = 842 Score = 287 bits (145), Expect = 3e-74 Identities = 256/294 (87%), Gaps = 1/294 (0%) Strand = Plus / Minus Query: 421 agtaagttgcggtaaacgtcaaggtctctatccacgcnnnnnnnattgatgtttagagca 480 |||| |||||||||||| |||||||| |||||||| | | ||| |||||| ||| Sbjct: 841 agtatgttgcggtaaacatcaaggtccctatccacacttcttttactgacgtttagtgca 782 Query: 481 gcgcaaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaac 540 |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 781 gcgcaaagcttgtctagtattgttggctccgttgcatttgagagctcaagcaaacggaac 722 Query: 541 aagccaacagcaaagaaccggctgtagcctgaagtttcccttaccctgggccctttctga 600 |||||||| |||||||| ||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 721 aagccaactgcaaagaatcggctgtag-ctgaagtttcccttacccttggccctttctga 663 Query: 601 tatatctttcagaatggactctatttccccatctctggaagaaaattcaactaacagatt 660 ||||||||||||||| | ||| ||||| ||||||||||||||||| |||||||| | | Sbjct: 662 tatatctttcagaatagcctcgatttctccatctctggaagaaaaatcaactaaggaact 603 Query: 661 accattttgtgagcgtgcccactcttccatcctttgtgcatcagccctgtattg 714 ||| || || || |||||||||||||||||| || |||||||||| |||||||| Sbjct: 602 accgttctgggaacgtgcccactcttccatctttagtgcatcagctctgtattg 549
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 232 bits (117), Expect = 1e-57 Identities = 193/217 (88%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 489 cttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaagccaac 548 |||||| |||| ||||||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 22267402 cttgtctagtatggttggctctgttgcatttgcaagctcaagcaaacggaacaagccaac 22267461 Query: 549 agcaaagaaccggctgtagcctgaagtttcccttaccctgggccctttctgatatatctt 608 ||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 22267462 tgcaaagaaccggctgtagc-tgaagcttcccttaccctgggccctttctgaaatatctt 22267520 Query: 609 tcagaatggactctatttccccatctctggaagaaaattcaactaacagattaccatttt 668 ||||||||| ||||||||| |||||| |||| ||||| |||||||| ||||||||| | Sbjct: 22267521 tcagaatggcctctatttctccatctttggatgaaaactcaactaaagaattaccattct 22267580 Query: 669 gtgagcgtgcccactcttccatcctttgtgcatcagc 705 | || || ||||||||||||||| ||||||| ||||| Sbjct: 22267581 gggaacgagcccactcttccatcttttgtgcgtcagc 22267617 Score = 54.0 bits (27), Expect = 7e-04 Identities = 89/112 (79%) Strand = Plus / Plus Query: 379 acgtattccttaagaagttccttggcttgaaccaatttcgacagtaagttgcggtaaacg 438 ||||||||||| ||||||||||| || || |||||||| || |||| ||| |||||||| Sbjct: 22266167 acgtattccttgagaagttccttagcctggaccaatttggagagtatgttccggtaaaca 22266226 Query: 439 tcaaggtctctatccacgcnnnnnnnattgatgtttagagcagcgcaaagct 490 || || || || || || | ||||||||||||||||||||||||| Sbjct: 22266227 tcgagatccctgtcgacacttcttttgttgatgtttagagcagcgcaaagct 22266278 Score = 44.1 bits (22), Expect = 0.63 Identities = 59/69 (85%), Gaps = 3/69 (4%) Strand = Plus / Plus Query: 52 ctcttcatatattgtcaacgaagtgaagaaaacggtacattcgaacacagagaaggagaa 111 |||||||||||||||||| ||| | ||||||| |||||| |||||| || |||||| | Sbjct: 22265524 ctcttcatatattgtcaaagaa--aaggaaaacgatacatttgaacactgaaaaggag-a 22265580 Query: 112 attacaaaa 120 ||||||||| Sbjct: 22265581 attacaaaa 22265589
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 232 bits (117), Expect = 1e-57 Identities = 193/217 (88%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 489 cttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaagccaac 548 |||||| |||| ||||||||| || ||||||| |||||||||||||||||||||||||| Sbjct: 72648 cttgtctagtatggttggctctgttgcatttgcaagctcaagcaaacggaacaagccaac 72707 Query: 549 agcaaagaaccggctgtagcctgaagtttcccttaccctgggccctttctgatatatctt 608 ||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 72708 tgcaaagaaccggctgtagc-tgaagcttcccttaccctgggccctttctgaaatatctt 72766 Query: 609 tcagaatggactctatttccccatctctggaagaaaattcaactaacagattaccatttt 668 ||||||||| ||||||||| |||||| |||| ||||| |||||||| ||||||||| | Sbjct: 72767 tcagaatggcctctatttctccatctttggatgaaaactcaactaaagaattaccattct 72826 Query: 669 gtgagcgtgcccactcttccatcctttgtgcatcagc 705 | || || ||||||||||||||| ||||||| ||||| Sbjct: 72827 gggaacgagcccactcttccatcttttgtgcgtcagc 72863 Score = 54.0 bits (27), Expect = 7e-04 Identities = 89/112 (79%) Strand = Plus / Plus Query: 379 acgtattccttaagaagttccttggcttgaaccaatttcgacagtaagttgcggtaaacg 438 ||||||||||| ||||||||||| || || |||||||| || |||| ||| |||||||| Sbjct: 71413 acgtattccttgagaagttccttagcctggaccaatttggagagtatgttccggtaaaca 71472 Query: 439 tcaaggtctctatccacgcnnnnnnnattgatgtttagagcagcgcaaagct 490 || || || || || || | ||||||||||||||||||||||||| Sbjct: 71473 tcgagatccctgtcgacacttcttttgttgatgtttagagcagcgcaaagct 71524 Score = 44.1 bits (22), Expect = 0.63 Identities = 59/69 (85%), Gaps = 3/69 (4%) Strand = Plus / Plus Query: 52 ctcttcatatattgtcaacgaagtgaagaaaacggtacattcgaacacagagaaggagaa 111 |||||||||||||||||| ||| | ||||||| |||||| |||||| || |||||| | Sbjct: 70770 ctcttcatatattgtcaaagaa--aaggaaaacgatacatttgaacactgaaaaggag-a 70826 Query: 112 attacaaaa 120 ||||||||| Sbjct: 70827 attacaaaa 70835
>dbj|AK059695.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B12, full insert sequence Length = 1512 Score = 83.8 bits (42), Expect = 7e-13 Identities = 110/135 (81%) Strand = Plus / Minus Query: 356 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 415 ||||||||||||||||||| || ||||||||||| ||||||||||| || || ||||||| Sbjct: 1121 ctctcttcttcttttccctttccacgtattccttgagaagttccttagcctggaccaatt 1062 Query: 416 tcgacagtaagttgcggtaaacgtcaaggtctctatccacgcnnnnnnnattgatgttta 475 | || |||| ||| |||||||| || || || || || || | |||||||||| Sbjct: 1061 tggagagtatgttccggtaaacatcgagatccctgtcgacacttcctttgttgatgttta 1002 Query: 476 gagcagcgcaaagct 490 ||||||||||||||| Sbjct: 1001 gagcagcgcaaagct 987 Score = 44.1 bits (22), Expect = 0.63 Identities = 59/69 (85%), Gaps = 3/69 (4%) Strand = Plus / Minus Query: 52 ctcttcatatattgtcaacgaagtgaagaaaacggtacattcgaacacagagaaggagaa 111 |||||||||||||||||| ||| | ||||||| |||||| |||||| || |||||| | Sbjct: 1448 ctcttcatatattgtcaaagaa--aaggaaaacgatacatttgaacactgaaaaggag-a 1392 Query: 112 attacaaaa 120 ||||||||| Sbjct: 1391 attacaaaa 1383
>ref|NM_127659.1| Arabidopsis thaliana THF1 AT2G20890 (THF1) mRNA, complete cds Length = 1246 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 360 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 407 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 916 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 869 Score = 46.1 bits (23), Expect = 0.16 Identities = 68/83 (81%) Strand = Plus / Minus Query: 484 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 543 ||||||||||||| || ||||| || || ||| ||| |||||||||||||| || | Sbjct: 792 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 733 Query: 544 ccaacagcaaagaaccggctgta 566 |||||||| ||||||| |||||| Sbjct: 732 ccaacagcgaagaacctgctgta 710
>gb|AY081596.1| Arabidopsis thaliana unknown protein (At2g20890) mRNA, complete cds Length = 953 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 360 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 407 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 801 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 754 Score = 46.1 bits (23), Expect = 0.16 Identities = 68/83 (81%) Strand = Plus / Minus Query: 484 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 543 ||||||||||||| || ||||| || || ||| ||| |||||||||||||| || | Sbjct: 677 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 618 Query: 544 ccaacagcaaagaaccggctgta 566 |||||||| ||||||| |||||| Sbjct: 617 ccaacagcgaagaacctgctgta 595
>gb|AY062799.1| Arabidopsis thaliana Unknown protein (At2g20890; F5H14.14) mRNA, complete cds Length = 1143 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 360 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 407 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 911 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 864 Score = 46.1 bits (23), Expect = 0.16 Identities = 68/83 (81%) Strand = Plus / Minus Query: 484 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 543 ||||||||||||| || ||||| || || ||| ||| |||||||||||||| || | Sbjct: 787 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 728 Query: 544 ccaacagcaaagaaccggctgta 566 |||||||| ||||||| |||||| Sbjct: 727 ccaacagcgaagaacctgctgta 705
>emb|BX818803.1|CNS0A8TL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 324 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 360 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 407 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 88 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 41
>emb|BX820185.1|CNS0A8J4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1158 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 360 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 407 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 905 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 858
>emb|BX820020.1|CNS0A8FF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZD04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1131 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 360 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 407 ||||||||| ||||||||||| || |||||||| | |||||||||||| Sbjct: 877 cttcttcttctccctctcgacatactccttaagcaattccttggcttg 830 Score = 46.1 bits (23), Expect = 0.16 Identities = 68/83 (81%) Strand = Plus / Minus Query: 484 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 543 ||||||||||||| || ||||| || || ||| ||| |||||||||||||| || | Sbjct: 753 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 694 Query: 544 ccaacagcaaagaaccggctgta 566 |||||||| ||||||| |||||| Sbjct: 693 ccaacagcgaagaacctgctgta 671
>gb|AY087394.1| Arabidopsis thaliana clone 34875 mRNA, complete sequence Length = 1246 Score = 48.1 bits (24), Expect = 0.040 Identities = 42/48 (87%) Strand = Plus / Minus Query: 360 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 407 ||||||||| ||||||||||| || |||||||| | ||| |||||||| Sbjct: 916 cttcttcttctccctctcgacatactccttaagcaattcattggcttg 869 Score = 46.1 bits (23), Expect = 0.16 Identities = 68/83 (81%) Strand = Plus / Minus Query: 484 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 543 ||||||||||||| || ||||| || || ||| ||| |||||||||||||| || | Sbjct: 792 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 733 Query: 544 ccaacagcaaagaaccggctgta 566 |||||||| ||||||| |||||| Sbjct: 732 ccaacagcgaagaacctgctgta 710
>gb|AY899908.1| Arabidopsis thaliana chloroplast thylakoid formation 1 (THF1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1245 Score = 48.1 bits (24), Expect = 0.040 Identities = 42/48 (87%) Strand = Plus / Minus Query: 360 cttcttcttttccctctcgacgtattccttaagaagttccttggcttg 407 ||||||||| ||||||||||| || |||||||| | ||| |||||||| Sbjct: 915 cttcttcttctccctctcgacatactccttaagcaattcattggcttg 868 Score = 46.1 bits (23), Expect = 0.16 Identities = 68/83 (81%) Strand = Plus / Minus Query: 484 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 543 ||||||||||||| || ||||| || || ||| ||| |||||||||||||| || | Sbjct: 791 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 732 Query: 544 ccaacagcaaagaaccggctgta 566 |||||||| ||||||| |||||| Sbjct: 731 ccaacagcgaagaacctgctgta 709
>emb|BX818901.1|CNS0A8Y0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB24ZE08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1114 Score = 46.1 bits (23), Expect = 0.16 Identities = 68/83 (81%) Strand = Plus / Minus Query: 484 caaagcttgtccagtacggttggctccgtcgcatttgagagctcaagcaaacggaacaag 543 ||||||||||||| || ||||| || || ||| ||| |||||||||||||| || | Sbjct: 774 caaagcttgtccaagacagttggatcagtagcacttgcaagctcaagcaaacgaaagagc 715 Query: 544 ccaacagcaaagaaccggctgta 566 |||||||| ||||||| |||||| Sbjct: 714 ccaacagcgaagaacctgctgta 692 Score = 40.1 bits (20), Expect = 9.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 372 cctctcgacgtattccttaagaagttccttggcttg 407 ||||||||| || |||||||| | |||||||||||| Sbjct: 886 cctctcgacatactccttaagcaattccttggcttg 851
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence Length = 211809 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 356 ctctcttcttcttttccctctc 377 |||||||||||||||||||||| Sbjct: 68122 ctctcttcttcttttccctctc 68143
>gb|AY342161.1| Solanum tuberosum cultivar Kennebec light-regulated chloroplast-localized protein (Thf1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1281 Score = 44.1 bits (22), Expect = 0.63 Identities = 25/26 (96%) Strand = Plus / Minus Query: 693 tttgtgcatcagccctgtattgctca 718 ||||||||||||| |||||||||||| Sbjct: 559 tttgtgcatcagctctgtattgctca 534 Score = 40.1 bits (20), Expect = 9.8 Identities = 80/100 (80%) Strand = Plus / Minus Query: 356 ctctcttcttcttttccctctcgacgtattccttaagaagttccttggcttgaaccaatt 415 ||||||| ||||| ||||| || ||||||||||| | || || || || ||||||| | Sbjct: 895 ctctctttttcttctccctttccacgtattccttcaacagctctttagcctgaaccagct 836 Query: 416 tcgacagtaagttgcggtaaacgtcaaggtctctatccac 455 | || || || ||||| |||||||||||||| | |||||| Sbjct: 835 tggagagcaaattgcgataaacgtcaaggtcccgatccac 796
>dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17G08, TM0023, complete sequence Length = 91039 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 ctctctgctctcttcttctttt 370 |||||||||||||||||||||| Sbjct: 32616 ctctctgctctcttcttctttt 32595
>gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's Hospital Oakland Research Institute) complete sequence Length = 221396 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 tctcttcttcttttccctctc 377 ||||||||||||||||||||| Sbjct: 88719 tctcttcttcttttccctctc 88699
>emb|BX908742.7| Zebrafish DNA sequence from clone DKEY-246G23 in linkage group 18, complete sequence Length = 232903 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 tattccttaagaagttccttg 402 ||||||||||||||||||||| Sbjct: 12936 tattccttaagaagttccttg 12916
>dbj|AK078026.1| Mus musculus 11 days embryo head cDNA, RIKEN full-length enriched library, clone:6230415J03 product:unclassifiable, full insert sequence Length = 1787 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 tctcttcttcttttccctctc 377 ||||||||||||||||||||| Sbjct: 1109 tctcttcttcttttccctctc 1089
>gb|AC113955.20| Mus musculus chromosome 7, clone RP23-402K24, complete sequence Length = 196206 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 tctcttcttcttttccctctc 377 ||||||||||||||||||||| Sbjct: 118373 tctcttcttcttttccctctc 118353
>emb|AL115993.1|CNS01CU9 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 tggcttgaaccaatttcgaca 421 ||||||||||||||||||||| Sbjct: 691 tggcttgaaccaatttcgaca 671
>emb|AL116480.1|CNS01D7S Botrytis cinerea strain T4 cDNA library Length = 540 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 tggcttgaaccaatttcgaca 421 ||||||||||||||||||||| Sbjct: 349 tggcttgaaccaatttcgaca 329
>emb|AL683856.10| Mouse DNA sequence from clone RP23-46J2 on chromosome X, complete sequence Length = 224461 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 tctcttcttcttttccctctc 377 ||||||||||||||||||||| Sbjct: 158791 tctcttcttcttttccctctc 158771
>dbj|AP002364.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-121L10, complete sequence Length = 165703 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 ttaccaaatatatgatttcta 24 ||||||||||||||||||||| Sbjct: 58394 ttaccaaatatatgatttcta 58374
>gb|AC170813.3| Rhesus Macaque BAC CH250-421G6 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 165221 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 tttaccaaatatatgatttctatct 27 |||||||||||||| |||||||||| Sbjct: 69745 tttaccaaatatatcatttctatct 69769
>gb|AC117787.8| Mus musculus chromosome 1, clone RP24-546N2, complete sequence Length = 203962 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 tctctgctctcttcttcttttccc 373 ||||||||||||||| |||||||| Sbjct: 129668 tctctgctctcttctccttttccc 129691
>ref|XM_529718.1| PREDICTED: Pan troglodytes LOC453671 (LOC453671), mRNA Length = 1007 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 cttaagaagttccttggctt 406 |||||||||||||||||||| Sbjct: 135 cttaagaagttccttggctt 154
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 592 cctttctgatatatctttcagaat 615 |||||||||||||| ||||||||| Sbjct: 824942 cctttctgatatatttttcagaat 824965
>gb|AC159446.1| Trypanosoma brucei chromosome 3 clone RPCI93-3K10, complete sequence Length = 91751 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 592 cctttctgatatatctttcagaat 615 |||||||||||||| ||||||||| Sbjct: 31388 cctttctgatatatttttcagaat 31411
>gb|AC106834.9| Mus musculus chromosome 19, clone RP24-132H7, complete sequence Length = 177277 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 atatatgatttctatcttgt 30 |||||||||||||||||||| Sbjct: 58680 atatatgatttctatcttgt 58661
>gb|AC113968.12| Mus musculus chromosome 8, clone RP23-120M17, complete sequence Length = 220191 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tctcttcttcttttccctct 376 |||||||||||||||||||| Sbjct: 16214 tctcttcttcttttccctct 16195
>gb|AC116812.10| Mus musculus chromosome 15, clone RP24-357G13, complete sequence Length = 183993 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 22366 tctctctgctctcttcttct 22385
>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence Length = 200229 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 5312 tctctctgctctcttcttct 5293
>gb|AC116871.6| Mus musculus chromosome 19, clone RP24-417P12, complete sequence Length = 161959 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 49162 tctctctgctctcttcttct 49181
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome 19 Length = 413528 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 atctctctgctctcttcttctttt 370 ||||||||||| |||||||||||| Sbjct: 20020 atctctctgctgtcttcttctttt 20043
>gb|AC089992.2| Bos taurus clone RP42-210F11, complete sequence Length = 147922 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 69562 tctctctgctctcttcttct 69581
>gb|AC158576.3| Mus musculus chromosome 7, clone RP24-252B21, complete sequence Length = 181195 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 618 actctatttccccatctctggaag 641 |||||||||||||||||| ||||| Sbjct: 54480 actctatttccccatctcaggaag 54503
>gb|AC164532.4| Mus musculus chromosome 7, clone RP24-64B10, complete sequence Length = 206573 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 75337 tctctctgctctcttcttct 75356
>gb|DP000008.1| Bos taurus target 1 genomic scaffold Length = 2072671 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 1297735 tctctctgctctcttcttct 1297754
>gb|AC092676.2| Homo sapiens BAC clone RP11-641E23 from 7, complete sequence Length = 118035 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 675 gtgcccactcttccatcctt 694 |||||||||||||||||||| Sbjct: 48026 gtgcccactcttccatcctt 48045
>ref|XM_947168.1| Theileria annulata strain Ankara exonuclease (TA13280) partial mRNA Length = 3363 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 ttttccctctcgacgtattcctta 390 |||||||||||||| ||||||||| Sbjct: 956 ttttccctctcgacatattcctta 933
>emb|CR854896.11| Zebrafish DNA sequence from clone DKEY-239B8 in linkage group 13, complete sequence Length = 165556 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 100624 tctctctgctctcttcttct 100605 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 71564 tctctctgctctcttcttct 71545
>emb|AL772182.3| Human DNA sequence from clone RP11-36K22 on chromosome X, complete sequence Length = 161047 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ctccaatctctctgctctct 361 |||||||||||||||||||| Sbjct: 36550 ctccaatctctctgctctct 36531
>gb|AC128353.6| Rattus norvegicus 13 BAC CH230-148A5 (Children's Hospital Oakland Research Institute) complete sequence Length = 207556 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 tgctctcttcttcttttccctctc 377 |||||||||||||| ||||||||| Sbjct: 122070 tgctctcttcttctcttccctctc 122047
>emb|AL161624.7| Human DNA sequence from clone RP11-487I9 on chromosome X Contains part of the DIAPH2 gene for Drosophila diaphanous homolog 2 and the 3' end of a novel gene (EPAG), complete sequence Length = 133021 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 atgtataactgttaatatct 241 |||||||||||||||||||| Sbjct: 49628 atgtataactgttaatatct 49609
>emb|AL135785.10| Human DNA sequence from clone RP11-113O24 on chromosome 9p11-13.3 Contains a novel gene, possible ortholog of mouse insulin-like growth factor binding protein 7 (IGFBP7), a novel gene similar to aldehyde dehydrogenase 1 family, member B1 (ALDH5, ALDHX, MGC2230) (ALDH1B1), a novel gene and four CpG islands, complete sequence Length = 166207 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 gtaaacgtcaaggtctctat 451 |||||||||||||||||||| Sbjct: 135197 gtaaacgtcaaggtctctat 135216
>gb|AC158781.4| Mus musculus chromosome 7, clone RP23-264H19, complete sequence Length = 208419 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 618 actctatttccccatctctggaag 641 ||||||||| |||||||||||||| Sbjct: 194618 actctattttcccatctctggaag 194595
>emb|BX842632.1| Neurospora crassa DNA linkage group I BAC contig B5K2 Length = 86737 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 acaccacgctaagagcagcc 187 |||||||||||||||||||| Sbjct: 41587 acaccacgctaagagcagcc 41568
>gb|AC100322.8| Mus musculus chromosome 7, clone RP23-124O24, complete sequence Length = 219314 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 618 actctatttccccatctctggaag 641 ||||||||| |||||||||||||| Sbjct: 15888 actctattttcccatctctggaag 15865
>emb|BX901922.9| Zebrafish DNA sequence from clone DKEY-33C12 in linkage group 13, complete sequence Length = 242350 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 187137 tctctctgctctcttcttct 187156 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 157745 tctctctgctctcttcttct 157764
>emb|BX000359.7| Mouse DNA sequence from clone RP23-343C18 on chromosome 11 Contains the gene for a novel helix-loop-helix DNA-binding domain containing protein, a novel gene, the Gosr1 gene for golgi SNAP receptor complex member 1 and a CpG island, complete sequence Length = 118586 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ctctcttcttcttttccctc 375 |||||||||||||||||||| Sbjct: 34246 ctctcttcttcttttccctc 34265
>gb|AC073531.22| Homo sapiens 12 BAC RP11-802J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 212172 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gaacacagagaaggagaaat 113 |||||||||||||||||||| Sbjct: 65255 gaacacagagaaggagaaat 65236
>emb|AL845307.29| Zebrafish DNA sequence from clone DKEY-56N17 in linkage group 13, complete sequence Length = 135795 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 120423 tctctctgctctcttcttct 120442
>emb|CR848040.6| Zebrafish DNA sequence from clone DKEY-19P15 in linkage group 13, complete sequence Length = 146215 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 40145 tctctctgctctcttcttct 40164
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 ccttggcttgaaccaatttc 417 |||||||||||||||||||| Sbjct: 2294119 ccttggcttgaaccaatttc 2294138
>gb|AF479287.1| Mus musculus PHF5B (Phf5b) pseudogene, complete sequence Length = 5285 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 3719 tctctctgctctcttcttct 3738
>gb|AC074312.64| Mus musculus strain C57BL/6J clone rp23-311c19 map 7, complete sequence Length = 220077 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 37435 tctctctgctctcttcttct 37416
>gb|AC006234.4| Arabidopsis thaliana chromosome 2 clone F5H14 map mi148, complete sequence Length = 129667 Score = 40.1 bits (20), Expect = 9.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 523 agctcaagcaaacggaacaagccaacagcaaagaaccggctgta 566 |||||||||||||| || | |||||||| ||||||| |||||| Sbjct: 43076 agctcaagcaaacgaaagagcccaacagcgaagaacctgctgta 43119 Score = 40.1 bits (20), Expect = 9.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 372 cctctcgacgtattccttaagaagttccttggcttg 407 ||||||||| || |||||||| | |||||||||||| Sbjct: 42757 cctctcgacatactccttaagcaattccttggcttg 42792
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 618 actctatttccccatctctg 637 |||||||||||||||||||| Sbjct: 145111 actctatttccccatctctg 145092
>gb|AC093897.3| Homo sapiens BAC clone RP11-721G13 from 4, complete sequence Length = 163271 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 615 tggactctatttccccatct 634 |||||||||||||||||||| Sbjct: 97576 tggactctatttccccatct 97557
>gb|AC016251.9| Homo sapiens chromosome 15, clone RP11-759A24, complete sequence Length = 182943 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 cttaagaagttccttggctt 406 |||||||||||||||||||| Sbjct: 119228 cttaagaagttccttggctt 119247
>gb|AC024243.8| Homo sapiens BAC clone RP11-528I4 from 4, complete sequence Length = 163857 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 613 aatggactctatttccccatctct 636 ||||| |||||||||||||||||| Sbjct: 118745 aatggtctctatttccccatctct 118768
>gb|AC012409.9| Homo sapiens chromosome 15, clone RP11-327J17, complete sequence Length = 183014 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 cttaagaagttccttggctt 406 |||||||||||||||||||| Sbjct: 48887 cttaagaagttccttggctt 48906
>gb|AC099538.2| Homo sapiens chromosome 3 clone RP11-90I9, complete sequence Length = 170033 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gttgagttaatgcttcaagg 292 |||||||||||||||||||| Sbjct: 6476 gttgagttaatgcttcaagg 6495
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tctctctgctctcttcttcttttc 371 ||||||| |||||||||||||||| Sbjct: 16997189 tctctctcctctcttcttcttttc 16997166 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tctctctgctctcttcttcttttc 371 ||||||| |||||||||||||||| Sbjct: 16976888 tctctctcctctcttcttcttttc 16976865
>gb|AC008537.5|AC008537 Homo sapiens chromosome 19 clone CTC-490E21, complete sequence Length = 169089 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 atctctctgctctcttcttctttt 370 ||||||||||| |||||||||||| Sbjct: 41020 atctctctgctgtcttcttctttt 41043
>gb|AC099053.2| Homo sapiens chromosome 3 clone RP11-464H2, complete sequence Length = 200069 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gttgagttaatgcttcaagg 292 |||||||||||||||||||| Sbjct: 172320 gttgagttaatgcttcaagg 172339
>gb|AC023795.18| Homo sapiens 12 BAC RP11-242B24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161838 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 ctctgctctcttcttctttt 370 |||||||||||||||||||| Sbjct: 101981 ctctgctctcttcttctttt 102000
>dbj|AK173094.1| Mus musculus premature mRNA for mKIAA1067 protein Length = 6719 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 ctctctgctctcttcttctt 368 |||||||||||||||||||| Sbjct: 1932 ctctctgctctcttcttctt 1951
>gb|AC153611.12| Mus musculus 6 BAC RP23-110P14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174538 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 tctctctgctctcttcttct 367 |||||||||||||||||||| Sbjct: 67099 tctctctgctctcttcttct 67118
>emb|AL929156.10| Mouse DNA sequence from clone RP23-475H18 on chromosome 2, complete sequence Length = 206918 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 ctcttcttcttttccctctc 377 |||||||||||||||||||| Sbjct: 117334 ctcttcttcttttccctctc 117353
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tctctctgctctcttcttcttttc 371 ||||||| |||||||||||||||| Sbjct: 16950422 tctctctcctctcttcttcttttc 16950399 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tctctctgctctcttcttcttttc 371 ||||||| |||||||||||||||| Sbjct: 16930121 tctctctcctctcttcttcttttc 16930098
>emb|AL732639.5|CNS08C9E Oryza sativa chromosome 12, . BAC OSJNBa0038H18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150238 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tctctctgctctcttcttcttttc 371 ||||||| |||||||||||||||| Sbjct: 119232 tctctctcctctcttcttcttttc 119209 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tctctctgctctcttcttcttttc 371 ||||||| |||||||||||||||| Sbjct: 98931 tctctctcctctcttcttcttttc 98908
>gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, complete sequence Length = 226167 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 618 actctatttccccatctctggaag 641 |||||||||||||||||| ||||| Sbjct: 11248 actctatttccccatctcaggaag 11225
>gb|L47539.1|HEACRP Haemophilus somnus cyclic AMP receptor protein (crp) gene, complete cds Length = 752 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 acagcctcgttcggcttggg 338 |||||||||||||||||||| Sbjct: 359 acagcctcgttcggcttggg 378
>emb|AL645861.12| Mouse DNA sequence from clone RP23-184G6 on chromosome 11, complete sequence Length = 212385 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 ctctctgctctcttcttctt 368 |||||||||||||||||||| Sbjct: 47200 ctctctgctctcttcttctt 47181
>dbj|AP001091.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-713N19, complete sequences Length = 207785 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 ctcttcttcttttccctctc 377 |||||||||||||||||||| Sbjct: 13020 ctcttcttcttttccctctc 13039 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,645,801 Number of Sequences: 3902068 Number of extensions: 6645801 Number of successful extensions: 138141 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 137717 Number of HSP's gapped (non-prelim): 410 length of query: 718 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 695 effective length of database: 17,143,297,704 effective search space: 11914591904280 effective search space used: 11914591904280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)