ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd19p01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF079526.1|AF079526 Triticum aestivum secretory protein (WAS-2) mRNA, complete cds Length = 894 Score = 759 bits (383), Expect = 0.0 Identities = 454/475 (95%), Gaps = 2/475 (0%) Strand = Plus / Minus Query: 113 ttcaggctccaaacttggatttgtagtcccgccacagctgctgcacgttcttgccgagaa 172 ||||| ||| |||||||| |||||||||| ||||||||||||||||||||| ||||||| Sbjct: 716 ttcagcctctaaacttggctttgtagtccttccacagctgctgcacgttcttcccgagaa 657 Query: 173 tctgcgcgaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacga 232 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 656 tctgcgcgaagaagtcgtcggtgtacccactcttcatcttggcgttgacgtgcgcgacga 597 Query: 233 acccgggcttcagtgagtcgcagtagtcgaggaacctcgccgtgacgtcgtacccctgat 292 |||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 596 acccgggcttgagcgagtcgcagtagtcaaggaacctcgccgtgacgtcgtacccctgat 537 Query: 293 cccaccggtctccctgccccggcttcacccagtgccccggcgcgaacccggccttgagcc 352 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 cccaccggtcgccctgccccggcttcacccagtgccccggcgcgaacccggccttgagcc 477 Query: 353 gcacgtagtcggcgatcccctcgatgagcccgccgttcgccttgccct-gcccgttccac 411 ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 476 gcacgtagtcggcgatcccctcgatgagcccgccgttcgcc-tgccctgggccgttccac 418 Query: 412 tgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccttcttgacatcgccg 471 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 417 tgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccttcttgacgtcgccg 358 Query: 472 gagatgctggcgacgtactgggcgctgaggtggatgccgttggcgctggtgaaggcgacg 531 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gagatgccgccgacgtactgggcgctgaggtggatgccgttggcgctggtgaaggcgacg 298 Query: 532 ccgctgatgtcctcgacgacgagggtgacggcgttgacaggcttgcggtcgccga 586 |||||||||||||||||||||||||||||||| | ||||| |||||||||||||| Sbjct: 297 ccgctgatgtcctcgacgacgagggtgacggcatcgacagtcttgcggtcgccga 243
>emb|Y14202.1|HVY14202 Hordeum vulgare mRNA for hypothetical protein, clone pBH6-17 Length = 859 Score = 599 bits (302), Expect = e-168 Identities = 428/470 (91%) Strand = Plus / Minus Query: 112 attcaggctccaaacttggatttgtagtcccgccacagctgctgcacgttcttgccgaga 171 |||||| |||| ||||||| |||||||||| |||||||||||| |||||||| |||||| Sbjct: 720 attcagcctccgaacttggctttgtagtccttccacagctgctggacgttcttcccgaga 661 Query: 172 atctgcgcgaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacg 231 |||||||||||||| || ||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 660 atctgcgcgaagaaatcatcgctgtacccgctcttcatcttggcgttgagctgcgcgacg 601 Query: 232 aacccgggcttcagtgagtcgcagtagtcgaggaacctcgccgtgacgtcgtacccctga 291 ||||||||| | || ||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 600 aacccgggcatgagcgagtcgcagtagtcgaggaacctcgccgtgatgtcgtatccctga 541 Query: 292 tcccaccggtctccctgccccggcttcacccagtgccccggcgcgaacccggccttgagc 351 ||||||||||| || |||| || | ||||||||||||||| | ||||||||||||| Sbjct: 540 tcccaccggtcgccgctcccctgcggcctccagtgccccggcgccagcccggccttgagc 481 Query: 352 cgcacgtagtcggcgatcccctcgatgagcccgccgttcgccttgccctgcccgttccac 411 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 480 cgcacgtagtcggcgatcccctcgatgagcccgccgttcgccgtgccccgcccgttccac 421 Query: 412 tgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccttcttgacatcgccg 471 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 420 tgccacacgtgggtcgcctcgtggtacagcacgccggtcacctccttcttgacgtcgccg 361 Query: 472 gagatgctggcgacgtactgggcgctgaggtggatgccgttggcgctggtgaaggcgacg 531 ||| || | ||||||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 360 gagtagccgccgacgtacttggcgctgaggtggatgccgttgccgctggcgaaggcgacg 301 Query: 532 ccgctgatgtcctcgacgacgagggtgacggcgttgacaggcttgcggtc 581 |||| ||||||||| ||||||||||||||||||| ||| ||||||||||| Sbjct: 300 ccgccgatgtcctccacgacgagggtgacggcgtcgacgggcttgcggtc 251
>gb|AY108161.1| Zea mays PCO128916 mRNA sequence Length = 648 Score = 402 bits (203), Expect = e-109 Identities = 307/342 (89%) Strand = Plus / Minus Query: 133 ttgtagtcccgccacagctgctgcacgttcttgccgagaatctgcgcgaagaagtcgtcg 192 ||||||||| ||||||||||||||||| ||||||| || ||||| ||||||||||||||| Sbjct: 353 ttgtagtcctgccacagctgctgcacggtcttgcccaggatctgggcgaagaagtcgtcg 294 Query: 193 gtgtacccactcttcatcttggcgttgagctgcgcgacgaacccgggcttcagtgagtcg 252 ||||| || ||||||||||||||||||| |||||||||| || ||||| || |||||| Sbjct: 293 gtgtagccgtccttcatcttggcgttgagcagcgcgacgaagcccggcttgagcgagtcg 234 Query: 253 cagtagtcgaggaacctcgccgtgacgtcgtacccctgatcccaccggtctccctgcccc 312 |||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 233 cagtagtccaggaacctcgccgtgacgtcgtacccctggtcccaccggtccccctgcccc 174 Query: 313 ggcttcacccagtgccccggcgcgaacccggccttgagccgcacgtagtcggcgatcccc 372 |||| ||||||||| ||||||||| |||| ||||| ||||| |||||||||||||| ||| Sbjct: 173 ggctgcacccagtggcccggcgcgtaccccgccttcagccggacgtagtcggcgatgccc 114 Query: 373 tcgatgagcccgccgttcgccttgccctgcccgttccactgccacacgtgcgtcgcctcg 432 |||||||| ||||||||||||| ||||||||||| |||||||||||||||||| | |||| Sbjct: 113 tcgatgaggccgccgttcgcctggccctgcccgtcccactgccacacgtgcgttgtctcg 54 Query: 433 tggtacagcacgccggtcacctccttcttgacatcgccggag 474 ||||||||||||||||| || || ||||||| || |||||| Sbjct: 53 tggtacagcacgccggtgacttcggtcttgacgtcnccggag 12
>gb|U32431.1|TAU32431 Triticum aestivum mRNA, clone WCI-5, complete cds Length = 862 Score = 244 bits (123), Expect = 3e-61 Identities = 276/327 (84%) Strand = Plus / Minus Query: 144 ccacagctgctgcacgttcttgccgagaatctgcgcgaagaagtcgtcggtgtacccact 203 ||||||||| | |||| |||| || || |||||| ||||| |||||||| |||| || Sbjct: 672 ccacagctggtccacgctcttccccaggatctgcacgaagtagtcgtcgctgtatccgtc 613 Query: 204 cttcatcttggcgttgagctgcgcgacgaacccgggcttcagtgagtcgcagtagtcgag 263 ||| | |||| ||| | || ||| |||||||||| ||| || |||||||||||||| || Sbjct: 612 cttgagcttgctgttcatctccgccacgaacccggccttgagggagtcgcagtagtccag 553 Query: 264 gaacctcgccgtgacgtcgtacccctgatcccaccggtctccctgccccggcttcaccca 323 |||| | ||||| ||||||||||||| ||||| ||||| || |||| || ||| Sbjct: 552 gaacttggccgtcacgtcgtacccctcgtcccaacggtcgccgctcccctgcgggcgcca 493 Query: 324 gtgccccggcgcgaacccggccttgagccgcacgtagtcggcgatcccctcgatgagccc 383 |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 gtgcgtcggcgcgaggtcggccttgagccgcacgtagtcggcgatcccctcgatgagccc 433 Query: 384 gccgttcgccttgccctgcccgttccactgccacacgtgcgtcgcctcgtggtacagcac 443 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 gccgtttgccctgccctgcccgttccactgccacacgtgcgtcgcctcgtggtacagcac 373 Query: 444 gccggtcacctccttcttgacatcgcc 470 ||| |||||||||||||||| ||||| Sbjct: 372 gcccttcacctccttcttgacgtcgcc 346
>ref|NM_197124.1| Oryza sativa (japonica cultivar-group) putative secretory protein (OSJNBa0051D19.12), mRNA Length = 783 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 247 gagtcgcagtagtcgaggaacctcgccgtgacgtcgtacccctgatcccaccggtctccc 306 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 644 gagtcgcagtagtcgaggaacctcgccgtcacgtcgtacccctggtcccaccggtcgccc 585 Query: 307 tgccccggcttcacccagtgccccggcgcgaacccggccttgagccgcacgtagtcggcg 366 ||||| |||| |||||||||| ||||||| | ||||| || || ||| |||||||| Sbjct: 584 tgcccgggctgcacccagtgcggcggcgcgtagccggcgcgcagtcggacgaagtcggcg 525 Query: 367 atcccctcgatgagcccgccgttcgccttgccctgcccgttccactgccacacgtgcgtc 426 ||||||||||| |||||||||| || ||| | |||| ||||||||||||||||||| Sbjct: 524 atcccctcgatcagcccgccgtcggcgccgccgcggccgtcccactgccacacgtgcgtc 465 Query: 427 gcctcgtggtacagcacgccggtcacctcc 456 |||||||||||||||||||||||||||||| Sbjct: 464 gcctcgtggtacagcacgccggtcacctcc 435 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 179 cgaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacgaaccc 236 |||||||||||||| |||| || |||||||||| ||||||||||||| |||||||| Sbjct: 718 cgaagaagtcgtcgctgtatccgtccttcatcttgccgttgagctgcgccacgaaccc 661 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 482 cgacgtactgggcgctgaggtggatgccgttggcgctggtgaaggcgacgccgctgatgt 541 |||||||| | ||||| ||||||||||||| | |||||||||| || |||||| ||||| Sbjct: 403 cgacgtaccgagcgctcaggtggatgccgtcgccgctggtgaacgccacgccgtcgatgt 344 Query: 542 cctc 545 |||| Sbjct: 343 cctc 340
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Minus Query: 247 gagtcgcagtagtcgaggaacctcgccgtgacgtcgtacccctgatcccaccggtctccc 306 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 90380 gagtcgcagtagtcgaggaacctcgccgtcacgtcgtacccctggtcccaccggtcgccc 90321 Query: 307 tgccccggcttcacccagtgccccggcgcgaacccggccttgagccgcacgtagtcggcg 366 ||||| |||| |||||||||| ||||||| | ||||| || || ||| |||||||| Sbjct: 90320 tgcccgggctgcacccagtgcggcggcgcgtagccggcgcgcagtcggacgaagtcggcg 90261 Query: 367 atcccctcgatgagcccgccgttcgccttgccctgcccgttccactgccacacgtgcgtc 426 ||||||||||| |||||||||| || ||| | |||| ||||||||||||||||||| Sbjct: 90260 atcccctcgatcagcccgccgtcggcgccgccgcggccgtcccactgccacacgtgcgtc 90201 Query: 427 gcctcgtggtacagcacgccggtcacctcc 456 |||||||||||||||||||||||||||||| Sbjct: 90200 gcctcgtggtacagcacgccggtcacctcc 90171 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 408 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccttcttgacatc 467 ||||||||||||||||||||||||||||||||||||||||||||||||| || | || || Sbjct: 92575 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccgtcctcacgtc 92516 Query: 468 gccggag 474 ||||||| Sbjct: 92515 gccggag 92509 Score = 79.8 bits (40), Expect = 9e-12 Identities = 127/156 (81%) Strand = Plus / Plus Query: 120 tccaaacttggatttgtagtcccgccacagctgctgcacgttcttgccgagaatctgcgc 179 |||| |||||| ||||| ||| ||||||||||||||||| |||| ||| |||||| | Sbjct: 86579 tccatacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcac 86638 Query: 180 gaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacgaacccggg 239 |||| ||||| || |||||||| |||||| ||| ||||| || | || |||||||| || Sbjct: 86639 gaagtagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctgg 86698 Query: 240 cttcagtgagtcgcagtagtcgaggaacctcgccgt 275 ||| | |||||||||||||| |||||||||||| Sbjct: 86699 cttgacgctgtcgcagtagtcgaagaacctcgccgt 86734 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 133 ttgtagtcccgccacagctgctgcacgttcttgccgagaatctgcgcgaagaagtcgtcg 192 ||||| ||| ||||||||||||||||| |||| ||| |||||| ||||| ||||| | Sbjct: 92853 ttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaagtagtcgaca 92794 Query: 193 gtgtacccactcttcatcttggcgttgagctgcgcgacgaacccgggcttcagtgagtcg 252 ||||||| ||||| |||||| |||| | ||||||||||| ||||| | |||| Sbjct: 92793 ttgtacccgtccttcaacttggcattgatgtcggcgacgaaccctggcttgacgctgtcg 92734 Query: 253 cagtagtcgaggaacctcgccgt 275 |||||||||| |||||||||||| Sbjct: 92733 cagtagtcgaagaacctcgccgt 92711 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 179 cgaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacgaaccc 236 |||||||||||||| |||| || |||||||||| ||||||||||||| |||||||| Sbjct: 90454 cgaagaagtcgtcgctgtatccgtccttcatcttgccgttgagctgcgccacgaaccc 90397 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 482 cgacgtactgggcgctgaggtggatgccgttggcgctggtgaaggcgacgccgctgatgt 541 |||||||| | ||||| ||||||||||||| | |||||||||| || |||||| ||||| Sbjct: 92492 cgacgtaccgcgcgctcaggtggatgccgtcgccgctggtgaacgccacgccgtcgatgt 92433 Query: 542 cctc 545 |||| Sbjct: 92432 cctc 92429 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 482 cgacgtactgggcgctgaggtggatgccgttggcgctggtgaaggcgacgccgctgatgt 541 |||||||| | ||||| ||||||||||||| | |||||||||| || |||||| ||||| Sbjct: 90139 cgacgtaccgagcgctcaggtggatgccgtcgccgctggtgaacgccacgccgtcgatgt 90080 Query: 542 cctc 545 |||| Sbjct: 90079 cctc 90076 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 349 agccgcacgtagtcggcgatcccctcg 375 ||||||||| ||||||||||||||||| Sbjct: 92637 agccgcacgaagtcggcgatcccctcg 92611 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 408 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacct 454 |||||||||||||||| | |||| ||||||| ||| |||||||||| Sbjct: 86870 ccactgccacacgtgcaccacctcatggtacaacactccggtcacct 86916
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Plus Query: 247 gagtcgcagtagtcgaggaacctcgccgtgacgtcgtacccctgatcccaccggtctccc 306 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 18122748 gagtcgcagtagtcgaggaacctcgccgtcacgtcgtacccctggtcccaccggtcgccc 18122807 Query: 307 tgccccggcttcacccagtgccccggcgcgaacccggccttgagccgcacgtagtcggcg 366 ||||| |||| |||||||||| ||||||| | ||||| || || ||| |||||||| Sbjct: 18122808 tgcccgggctgcacccagtgcggcggcgcgtagccggcgcgcagtcggacgaagtcggcg 18122867 Query: 367 atcccctcgatgagcccgccgttcgccttgccctgcccgttccactgccacacgtgcgtc 426 ||||||||||| |||||||||| || ||| | |||| ||||||||||||||||||| Sbjct: 18122868 atcccctcgatcagcccgccgtcggcgccgccgcggccgtcccactgccacacgtgcgtc 18122927 Query: 427 gcctcgtggtacagcacgccggtcacctcc 456 |||||||||||||||||||||||||||||| Sbjct: 18122928 gcctcgtggtacagcacgccggtcacctcc 18122957 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 408 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccttcttgacatc 467 ||||||||||||||||||||||||||||||||||||||||||||||||| || | || || Sbjct: 18120553 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccgtcctcacgtc 18120612 Query: 468 gccggag 474 ||||||| Sbjct: 18120613 gccggag 18120619 Score = 79.8 bits (40), Expect = 9e-12 Identities = 127/156 (81%) Strand = Plus / Minus Query: 120 tccaaacttggatttgtagtcccgccacagctgctgcacgttcttgccgagaatctgcgc 179 |||| |||||| ||||| ||| ||||||||||||||||| |||| ||| |||||| | Sbjct: 18126549 tccatacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcac 18126490 Query: 180 gaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacgaacccggg 239 |||| ||||| || |||||||| |||||| ||| ||||| || | || |||||||| || Sbjct: 18126489 gaagtagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctgg 18126430 Query: 240 cttcagtgagtcgcagtagtcgaggaacctcgccgt 275 ||| | |||||||||||||| |||||||||||| Sbjct: 18126429 cttgacgctgtcgcagtagtcgaagaacctcgccgt 18126394 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 133 ttgtagtcccgccacagctgctgcacgttcttgccgagaatctgcgcgaagaagtcgtcg 192 ||||| ||| ||||||||||||||||| |||| ||| |||||| ||||| ||||| | Sbjct: 18120275 ttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaagtagtcgaca 18120334 Query: 193 gtgtacccactcttcatcttggcgttgagctgcgcgacgaacccgggcttcagtgagtcg 252 ||||||| ||||| |||||| |||| | ||||||||||| ||||| | |||| Sbjct: 18120335 ttgtacccgtccttcaacttggcattgatgtcggcgacgaaccctggcttgacgctgtcg 18120394 Query: 253 cagtagtcgaggaacctcgccgt 275 |||||||||| |||||||||||| Sbjct: 18120395 cagtagtcgaagaacctcgccgt 18120417 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 179 cgaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacgaaccc 236 |||||||||||||| |||| || |||||||||| ||||||||||||| |||||||| Sbjct: 18122674 cgaagaagtcgtcgctgtatccgtccttcatcttgccgttgagctgcgccacgaaccc 18122731 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 482 cgacgtactgggcgctgaggtggatgccgttggcgctggtgaaggcgacgccgctgatgt 541 |||||||| | ||||| ||||||||||||| | |||||||||| || |||||| ||||| Sbjct: 18122989 cgacgtaccgagcgctcaggtggatgccgtcgccgctggtgaacgccacgccgtcgatgt 18123048 Query: 542 cctc 545 |||| Sbjct: 18123049 cctc 18123052 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 482 cgacgtactgggcgctgaggtggatgccgttggcgctggtgaaggcgacgccgctgatgt 541 |||||||| | ||||| ||||||||||||| | |||||||||| || |||||| ||||| Sbjct: 18120636 cgacgtaccgcgcgctcaggtggatgccgtcgccgctggtgaacgccacgccgtcgatgt 18120695 Query: 542 cctc 545 |||| Sbjct: 18120696 cctc 18120699 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 408 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacct 454 |||||||||||||||| | |||| ||||||| ||| |||||||||| Sbjct: 18126258 ccactgccacacgtgcaccacctcatggtacaacactccggtcacct 18126212 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 349 agccgcacgtagtcggcgatcccctcg 375 ||||||||| ||||||||||||||||| Sbjct: 18120491 agccgcacgaagtcggcgatcccctcg 18120517
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 210 bits (106), Expect = 4e-51 Identities = 184/210 (87%) Strand = Plus / Plus Query: 247 gagtcgcagtagtcgaggaacctcgccgtgacgtcgtacccctgatcccaccggtctccc 306 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 18132001 gagtcgcagtagtcgaggaacctcgccgtcacgtcgtacccctggtcccaccggtcgccc 18132060 Query: 307 tgccccggcttcacccagtgccccggcgcgaacccggccttgagccgcacgtagtcggcg 366 ||||| |||| |||||||||| ||||||| | ||||| || || ||| |||||||| Sbjct: 18132061 tgcccgggctgcacccagtgcggcggcgcgtagccggcgcgcagtcggacgaagtcggcg 18132120 Query: 367 atcccctcgatgagcccgccgttcgccttgccctgcccgttccactgccacacgtgcgtc 426 ||||||||||| |||||||||| || ||| | |||| ||||||||||||||||||| Sbjct: 18132121 atcccctcgatcagcccgccgtcggcgccgccgcggccgtcccactgccacacgtgcgtc 18132180 Query: 427 gcctcgtggtacagcacgccggtcacctcc 456 |||||||||||||||||||||||||||||| Sbjct: 18132181 gcctcgtggtacagcacgccggtcacctcc 18132210 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 408 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccttcttgacatc 467 ||||||||||||||||||||||||||||||||||||||||||||||||| || | || || Sbjct: 18129806 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccgtcctcacgtc 18129865 Query: 468 gccggag 474 ||||||| Sbjct: 18129866 gccggag 18129872 Score = 79.8 bits (40), Expect = 9e-12 Identities = 127/156 (81%) Strand = Plus / Minus Query: 120 tccaaacttggatttgtagtcccgccacagctgctgcacgttcttgccgagaatctgcgc 179 |||| |||||| ||||| ||| ||||||||||||||||| |||| ||| |||||| | Sbjct: 18135802 tccatacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcac 18135743 Query: 180 gaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacgaacccggg 239 |||| ||||| || |||||||| |||||| ||| ||||| || | || |||||||| || Sbjct: 18135742 gaagtagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctgg 18135683 Query: 240 cttcagtgagtcgcagtagtcgaggaacctcgccgt 275 ||| | |||||||||||||| |||||||||||| Sbjct: 18135682 cttgacgctgtcgcagtagtcgaagaacctcgccgt 18135647 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Plus Query: 133 ttgtagtcccgccacagctgctgcacgttcttgccgagaatctgcgcgaagaagtcgtcg 192 ||||| ||| ||||||||||||||||| |||| ||| |||||| ||||| ||||| | Sbjct: 18129528 ttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaagtagtcgaca 18129587 Query: 193 gtgtacccactcttcatcttggcgttgagctgcgcgacgaacccgggcttcagtgagtcg 252 ||||||| ||||| |||||| |||| | ||||||||||| ||||| | |||| Sbjct: 18129588 ttgtacccgtccttcaacttggcattgatgtcggcgacgaaccctggcttgacgctgtcg 18129647 Query: 253 cagtagtcgaggaacctcgccgt 275 |||||||||| |||||||||||| Sbjct: 18129648 cagtagtcgaagaacctcgccgt 18129670 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 179 cgaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacgaaccc 236 |||||||||||||| |||| || |||||||||| ||||||||||||| |||||||| Sbjct: 18131927 cgaagaagtcgtcgctgtatccgtccttcatcttgccgttgagctgcgccacgaaccc 18131984 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 482 cgacgtactgggcgctgaggtggatgccgttggcgctggtgaaggcgacgccgctgatgt 541 |||||||| | ||||| ||||||||||||| | |||||||||| || |||||| ||||| Sbjct: 18132242 cgacgtaccgagcgctcaggtggatgccgtcgccgctggtgaacgccacgccgtcgatgt 18132301 Query: 542 cctc 545 |||| Sbjct: 18132302 cctc 18132305 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 482 cgacgtactgggcgctgaggtggatgccgttggcgctggtgaaggcgacgccgctgatgt 541 |||||||| | ||||| ||||||||||||| | |||||||||| || |||||| ||||| Sbjct: 18129889 cgacgtaccgcgcgctcaggtggatgccgtcgccgctggtgaacgccacgccgtcgatgt 18129948 Query: 542 cctc 545 |||| Sbjct: 18129949 cctc 18129952 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 408 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacct 454 |||||||||||||||| | |||| ||||||| ||| |||||||||| Sbjct: 18135511 ccactgccacacgtgcaccacctcatggtacaacactccggtcacct 18135465 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 349 agccgcacgtagtcggcgatcccctcg 375 ||||||||| ||||||||||||||||| Sbjct: 18129744 agccgcacgaagtcggcgatcccctcg 18129770
>emb|Y14201.1|HVY14201 Hordeum vulgare mRNA for hypothetical protein, clone pBH6-12 Length = 829 Score = 103 bits (52), Expect = 6e-19 Identities = 174/212 (82%), Gaps = 2/212 (0%) Strand = Plus / Minus Query: 166 ccgagaatctgcgcgaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgc 225 ||||| |||||| ||||| |||||||| |||| || ||| | |||| |||| | || | Sbjct: 640 ccgaggatctgcacgaagtagtcgtcgttgtagccgtccttgagcttgccgttcatctcc 581 Query: 226 gcgacgaacccgggcttcagtgagtcgcagtagtcgaggaacctcgccgtgacgtcgtac 285 || |||||||||||||| | |||||||||||||| |||||||| ||||| |||||||| Sbjct: 580 gccacgaacccgggcttgcgcgagtcgcagtagtccaggaacctggccgtcacgtcgtat 521 Query: 286 ccctgatcccaccggtctccctgc-cccggcttcacccagtgccccggcgcgaacccggc 344 |||| ||||||||| || || | ||| ||||||||||| | ||| || ||||||| Sbjct: 520 ccctcgtcccaccgg-ctgccgccgccctccttcacccagttcgccgctacgtacccggc 462 Query: 345 cttgagccgcacgtagtcggcgatcccctcga 376 |||||||||||||||||| ||||||||||||| Sbjct: 461 cttgagccgcacgtagtccgcgatcccctcga 430 Score = 48.1 bits (24), Expect = 0.033 Identities = 33/36 (91%) Strand = Plus / Minus Query: 408 ccactgccacacgtgcgtcgcctcgtggtacagcac 443 |||||||||||||||| | |||||||||||||||| Sbjct: 395 ccactgccacacgtgcaccacctcgtggtacagcac 360
>ref|NM_197123.1| Oryza sativa (japonica cultivar-group) putative secretory protein (OSJNBa0051D19.13), mRNA Length = 702 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 408 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccttcttgacatc 467 ||||||||||||||||||||||||||||||||||||||||||||||||| || | || || Sbjct: 405 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccgtcctcacgtc 346 Query: 468 gccggag 474 ||||||| Sbjct: 345 gccggag 339 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 133 ttgtagtcccgccacagctgctgcacgttcttgccgagaatctgcgcgaagaagtcgtcg 192 ||||| ||| ||||||||||||||||| |||| ||| |||||| ||||| ||||| | Sbjct: 683 ttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaagtagtcgaca 624 Query: 193 gtgtacccactcttcatcttggcgttgagctgcgcgacgaacccgggcttcagtgagtcg 252 ||||||| ||||| |||||| |||| | ||||||||||| ||||| | |||| Sbjct: 623 ttgtacccgtccttcaacttggcattgatgtcggcgacgaaccctggcttgacgctgtcg 564 Query: 253 cagtagtcgaggaacctcgccgt 275 |||||||||| |||||||||||| Sbjct: 563 cagtagtcgaagaacctcgccgt 541 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 482 cgacgtactgggcgctgaggtggatgccgttggcgctggtgaaggcgacgccgctgatgt 541 |||||||| | ||||| ||||||||||||| | |||||||||| || |||||| ||||| Sbjct: 322 cgacgtaccgcgcgctcaggtggatgccgtcgccgctggtgaacgccacgccgtcgatgt 263 Query: 542 cctc 545 |||| Sbjct: 262 cctc 259 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 349 agccgcacgtagtcggcgatcccctcg 375 ||||||||| ||||||||||||||||| Sbjct: 467 agccgcacgaagtcggcgatcccctcg 441
>ref|NM_197125.1| Oryza sativa (japonica cultivar-group) putative basic secretory protein (OSJNBa0051D19.25), mRNA Length = 690 Score = 79.8 bits (40), Expect = 9e-12 Identities = 127/156 (81%) Strand = Plus / Minus Query: 120 tccaaacttggatttgtagtcccgccacagctgctgcacgttcttgccgagaatctgcgc 179 |||| |||||| ||||| ||| ||||||||||||||||| |||| ||| |||||| | Sbjct: 684 tccatacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcac 625 Query: 180 gaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacgaacccggg 239 |||| ||||| || |||||||| |||||| ||| ||||| || | || |||||||| || Sbjct: 624 gaagtagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctgg 565 Query: 240 cttcagtgagtcgcagtagtcgaggaacctcgccgt 275 ||| | |||||||||||||| |||||||||||| Sbjct: 564 cttgacgctgtcgcagtagtcgaagaacctcgccgt 529 Score = 48.1 bits (24), Expect = 0.033 Identities = 48/56 (85%) Strand = Plus / Minus Query: 408 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccttcttga 463 |||||||||||||||| | |||| ||||||| ||| |||||||||| | |||||| Sbjct: 393 ccactgccacacgtgcaccacctcatggtacaacactccggtcacctgcgtcttga 338
>dbj|AK100816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122C23, full insert sequence Length = 856 Score = 79.8 bits (40), Expect = 9e-12 Identities = 127/156 (81%) Strand = Plus / Minus Query: 120 tccaaacttggatttgtagtcccgccacagctgctgcacgttcttgccgagaatctgcgc 179 |||| |||||| ||||| ||| ||||||||||||||||| |||| ||| |||||| | Sbjct: 704 tccatacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcac 645 Query: 180 gaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacgaacccggg 239 |||| ||||| || |||||||| |||||| ||| ||||| || | || |||||||| || Sbjct: 644 gaagtagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctgg 585 Query: 240 cttcagtgagtcgcagtagtcgaggaacctcgccgt 275 ||| | |||||||||||||| |||||||||||| Sbjct: 584 cttgacgctgtcgcagtagtcgaagaacctcgccgt 549 Score = 48.1 bits (24), Expect = 0.033 Identities = 48/56 (85%) Strand = Plus / Minus Query: 408 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccttcttga 463 |||||||||||||||| | |||| ||||||| ||| |||||||||| | |||||| Sbjct: 413 ccactgccacacgtgcaccacctcatggtacaacactccggtcacctgcgtcttga 358
>dbj|AK059607.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F02, full insert sequence Length = 852 Score = 79.8 bits (40), Expect = 9e-12 Identities = 127/156 (81%) Strand = Plus / Minus Query: 120 tccaaacttggatttgtagtcccgccacagctgctgcacgttcttgccgagaatctgcgc 179 |||| |||||| ||||| ||| ||||||||||||||||| |||| ||| |||||| | Sbjct: 700 tccatacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcac 641 Query: 180 gaagaagtcgtcggtgtacccactcttcatcttggcgttgagctgcgcgacgaacccggg 239 |||| ||||| || |||||||| |||||| ||| ||||| || | || |||||||| || Sbjct: 640 gaagtagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctgg 581 Query: 240 cttcagtgagtcgcagtagtcgaggaacctcgccgt 275 ||| | |||||||||||||| |||||||||||| Sbjct: 580 cttgacgctgtcgcagtagtcgaagaacctcgccgt 545 Score = 48.1 bits (24), Expect = 0.033 Identities = 48/56 (85%) Strand = Plus / Minus Query: 408 ccactgccacacgtgcgtcgcctcgtggtacagcacgccggtcacctccttcttga 463 |||||||||||||||| | |||| ||||||| ||| |||||||||| | |||||| Sbjct: 409 ccactgccacacgtgcaccacctcatggtacaacactccggtcacctgcgtcttga 354
>emb|BX004823.23| Zebrafish DNA sequence from clone DKEY-13A3 in linkage group 14, complete sequence Length = 197683 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 4 tttatttatcttttatttattat 26 ||||||||||||||||||||||| Sbjct: 152353 tttatttatcttttatttattat 152375
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 318 cacccagtgccccggcgcgaacc 340 ||||||||||||||||||||||| Sbjct: 3952396 cacccagtgccccggcgcgaacc 3952418
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 514 gcgctggtgaaggcgacgccgc 535 |||||||||||||||||||||| Sbjct: 257719 gcgctggtgaaggcgacgccgc 257698
>emb|BX276089.8| Human DNA sequence from clone RP11-69I17 on chromosome 6, complete sequence Length = 54274 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttatt 24 |||||||||||||||||||||| Sbjct: 13030 ttttatttatcttttatttatt 13009
>emb|BX957248.11| Zebrafish DNA sequence from clone DKEY-195J22 in linkage group 13, complete sequence Length = 77299 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttatt 24 |||||||||||||||||||||| Sbjct: 70091 ttttatttatcttttatttatt 70070
>emb|CR855302.6| Zebrafish DNA sequence from clone CH211-120A5 in linkage group 3, complete sequence Length = 182196 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 tttatttatcttttatttattataca 29 ||||||||| |||||||||||||||| Sbjct: 94358 tttatttattttttatttattataca 94383
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 513 ggcgctggtgaaggcgacgccgctgatgtc 542 ||||| ||||||||||| |||||||||||| Sbjct: 4524333 ggcgccggtgaaggcgatgccgctgatgtc 4524362
>gb|AC098857.3| Homo sapiens BAC clone RP11-115I12 from 2, complete sequence Length = 80506 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttatt 24 |||||||||||||||||||||| Sbjct: 75762 ttttatttatcttttatttatt 75741
>gb|AC137053.2| Homo sapiens 12 BAC RP11-641O3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116625 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattatac 28 |||||||||| ||||||||||||||| Sbjct: 110018 ttttatttattttttatttattatac 110043
>emb|BX088561.9| Zebrafish DNA sequence from clone DKEY-257G8 in linkage group 2, complete sequence Length = 190419 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttatt 24 |||||||||||||||||||||| Sbjct: 174879 ttttatttatcttttatttatt 174900
>emb|BX927161.7| Zebrafish DNA sequence from clone DKEY-181G6 in linkage group 19, complete sequence Length = 129477 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 ttatttatcttttatttattat 26 |||||||||||||||||||||| Sbjct: 71595 ttatttatcttttatttattat 71574
>emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on chromosome 4, complete sequence Length = 193813 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 gttttatttatcttttatttat 23 |||||||||||||||||||||| Sbjct: 49301 gttttatttatcttttatttat 49280
>dbj|AB070946.1| Streptomyces avermitilis polyketide-8 biosynthetic gene cluster Length = 24790 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 513 ggcgctggtgaaggcgacgccgctgatgtc 542 ||||| ||||||||||| |||||||||||| Sbjct: 20333 ggcgccggtgaaggcgatgccgctgatgtc 20304
>gb|AC109305.6| Mus musculus chromosome 1, clone RP24-350F5, complete sequence Length = 184088 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 17766 tttatttatcttttatttatt 17746
>gb|AC132355.4| Mus musculus BAC clone RP24-114M18 from chromosome 9, complete sequence Length = 192351 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 7279 tttatttatcttttatttatt 7299
>gb|AC113176.8| Mus musculus chromosome 3, clone RP23-453A2, complete sequence Length = 217606 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 116016 tttatttatcttttatttatt 116036
>gb|AC121575.4| Mus musculus BAC clone RP23-241P4 from 1, complete sequence Length = 193725 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 46852 tttatttatcttttatttatt 46832
>ref|XM_666434.1| Plasmodium berghei strain ANKA hypothetical protein (PB405445.00.0) partial mRNA Length = 135 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 8 tttatttatcttttatttatt 28
>gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6 of 13 of the complete sequence Length = 250823 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gttttatttatcttttatttattat 26 ||||| ||||||||||||||||||| Sbjct: 188348 gttttttttatcttttatttattat 188372
>gb|AC183286.3| Pan troglodytes BAC clone CH251-56I13 from chromosome 15, complete sequence Length = 164317 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 tttatttatcttttatttattatac 28 ||||||||| ||||||||||||||| Sbjct: 118736 tttatttattttttatttattatac 118760
>emb|AL138879.10| Human DNA sequence from clone RP11-397G17 on chromosome 6p11.2-21 Contains the 3' end of a novel gene, complete sequence Length = 164064 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 50478 tttatttatcttttatttatt 50458
>ref|XM_782170.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein MICAL-3 (LOC582210), partial mRNA Length = 4097 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 521 tgaaggcgacgccgctgatgtcctcgacg 549 |||| |||||||||||||| ||||||||| Sbjct: 2008 tgaaagcgacgccgctgatctcctcgacg 1980 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 521 tgaaggcgacgccgctgatgtcctcgacg 549 |||| |||||||||||||| ||||||||| Sbjct: 1765 tgaaagcgacgccgctgatctcctcgacg 1737
>emb|AL117340.3|HSBA192P3 Human DNA sequence from clone RP11-192P3 on chromosome 10 Contains a novel gene, the 5' end of the TCF8 gene for transcription factor 8 (represses interleukin 2 expression) (BZP,ZEB,ZEB1,AREB6,ZFHEP,NIL-2A,ZFHX1A,NIL-2-A), a pseudogene similar to part of serine palmitoyltransferase, long chain base subunit 1 (SPTLC1) (HSAN, HSN1, LBC1, LCB1, SPT1, SPTI) and two CpG islands, complete sequence Length = 187517 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 tttatttatcttttatttattatac 28 |||||||||||||| |||||||||| Sbjct: 6297 tttatttatcttttttttattatac 6273
>gb|AC159969.4| Mus musculus chromosome 3, clone RP23-301F20, complete sequence Length = 187487 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 45197 tttatttatcttttatttatt 45177
>gb|AC040904.4| Homo sapiens chromosome 17, clone RP11-619I22, complete sequence Length = 173651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 99959 tttatttatcttttatttatt 99939
>emb|CR450728.8| Zebrafish DNA sequence from clone DKEY-204K18 in linkage group 8, complete sequence Length = 193025 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattata 27 ||||||||||| ||||||||||||| Sbjct: 72742 ttttatttatcatttatttattata 72766
>emb|BX936403.9| Zebrafish DNA sequence from clone CH211-281A24 in linkage group 5, complete sequence Length = 142908 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gttttatttatcttttattta 22 ||||||||||||||||||||| Sbjct: 76054 gttttatttatcttttattta 76074
>gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 159970 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttat 23 ||||||||||||||||||||| Sbjct: 130933 ttttatttatcttttatttat 130953
>gb|AE005681.1| Caulobacter crescentus CB15 section 7 of 359 of the complete genome Length = 10507 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 507 gccgttggcgctggtgaaggc 527 ||||||||||||||||||||| Sbjct: 4952 gccgttggcgctggtgaaggc 4932
>gb|AY918867.1| Oreochromis niloticus granzyme-1 gene, complete cds Length = 2543 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gttttatttatcttttattta 22 ||||||||||||||||||||| Sbjct: 2209 gttttatttatcttttattta 2189
>gb|AC092810.2| Homo sapiens chromosome 1 clone RP11-385M4, complete sequence Length = 173917 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gttttatttatcttttattta 22 ||||||||||||||||||||| Sbjct: 54258 gttttatttatcttttattta 54238
>ref|XM_690951.1| PREDICTED: Danio rerio similar to Protein MICAL-3 (LOC567652), mRNA Length = 3414 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 521 tgaaggcgacgccgctgatgtcctc 545 ||||||||||||||||||| ||||| Sbjct: 799 tgaaggcgacgccgctgatctcctc 775
>ref|XM_690137.1| PREDICTED: Danio rerio similar to Protein MICAL-3 (LOC566850), mRNA Length = 4692 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 521 tgaaggcgacgccgctgatgtcctc 545 ||||||||||||||||||| ||||| Sbjct: 799 tgaaggcgacgccgctgatctcctc 775
>emb|BX248080.21| Zebrafish DNA sequence from clone CH211-226C1 in linkage group 5, complete sequence Length = 188075 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattata 27 |||||||||| |||||||||||||| Sbjct: 143128 ttttatttattttttatttattata 143152
>emb|BX537264.9| Zebrafish DNA sequence from clone CH211-1C4 in linkage group 5, complete sequence Length = 160220 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttat 23 ||||||||||||||||||||| Sbjct: 121967 ttttatttatcttttatttat 121947
>emb|BX465859.13| Zebrafish DNA sequence from clone DKEYP-67G10 in linkage group 4, complete sequence Length = 214205 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 521 tgaaggcgacgccgctgatgtcctc 545 ||||||||||||||||||| ||||| Sbjct: 173168 tgaaggcgacgccgctgatctcctc 173144
>gb|AC026413.5|AC026413 Homo sapiens chromosome 5 clone CTD-2030B15, complete sequence Length = 117928 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 20425 tttatttatcttttatttatt 20445
>ref|XM_623360.1| PREDICTED: Apis mellifera similar to ENSANGP00000016027 (LOC550966), mRNA Length = 1944 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttattata 27 |||||||||| |||||||||||||| Sbjct: 1944 ttttatttattttttatttattata 1920
>gb|AC155907.2| Mus musculus BAC clone RP23-250B18 from chromosome 9, complete sequence Length = 183619 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 76478 tttatttatcttttatttatt 76458
>gb|AC009975.9| Homo sapiens BAC clone RP11-460M2 from 2, complete sequence Length = 211305 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 tttatttatcttttatttattatac 28 ||||||||| ||||||||||||||| Sbjct: 95667 tttatttattttttatttattatac 95643
>gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184175 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttat 23 ||||||||||||||||||||| Sbjct: 72438 ttttatttatcttttatttat 72458
>gb|AC124781.4| Homo sapiens BAC clone RP11-219M8 from 7, complete sequence Length = 192653 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 60431 tttatttatcttttatttatt 60451
>gb|AC016894.11| Homo sapiens BAC clone RP11-17D23 from 2, complete sequence Length = 135160 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 133856 tttatttatcttttatttatt 133836
>gb|AC010285.4|AC010285 Homo sapiens chromosome 5 clone CTC-563A5, complete sequence Length = 124289 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 46777 tttatttatcttttatttatt 46797
>emb|BX649514.8| Zebrafish DNA sequence from clone CH211-232P6 in linkage group 4, complete sequence Length = 152488 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 521 tgaaggcgacgccgctgatgtcctc 545 ||||||||||||||||||| ||||| Sbjct: 87770 tgaaggcgacgccgctgatctcctc 87794
>emb|CR762425.5| Zebrafish DNA sequence from clone CH211-181P1 in linkage group 18, complete sequence Length = 145468 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 120597 tttatttatcttttatttatt 120617
>emb|BX649444.12| Zebrafish DNA sequence from clone DKEYP-27E10 in linkage group 4, complete sequence Length = 85097 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 521 tgaaggcgacgccgctgatgtcctc 545 ||||||||||||||||||| ||||| Sbjct: 707 tgaaggcgacgccgctgatctcctc 731
>emb|BX901962.8| Zebrafish DNA sequence from clone DKEY-153K10 in linkage group 4, complete sequence Length = 182550 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 521 tgaaggcgacgccgctgatgtcctc 545 ||||||||||||||||||| ||||| Sbjct: 181257 tgaaggcgacgccgctgatctcctc 181281
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 tcttcatcttggcgttgagct 223 ||||||||||||||||||||| Sbjct: 1387681 tcttcatcttggcgttgagct 1387661
>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete sequence Length = 318665 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttat 23 ||||||||||||||||||||| Sbjct: 99327 ttttatttatcttttatttat 99347
>emb|CT030236.7| Mouse DNA sequence from clone RP23-445B11 on chromosome 16, complete sequence Length = 166709 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttatt 24 ||||||||||||||||||||| Sbjct: 147386 tttatttatcttttatttatt 147366
>dbj|AB024600.1| Nicotiana tabacum mRNA for NtPRp27, complete cds Length = 1560 Score = 42.1 bits (21), Expect = 2.0 Identities = 60/73 (82%) Strand = Plus / Minus Query: 280 tcgtacccctgatcccaccggtctccctgccccggcttcacccagtgccccggcgcgaac 339 ||||| ||||| ||||| ||||| ||||| || || ||||||||||| | || ||||| Sbjct: 1163 tcgtagccctggtcccatcggtcgccctggcctggtttcacccagtggctaggtgcgaaa 1104 Query: 340 ccggccttgagcc 352 ||||| ||||||| Sbjct: 1103 ccggctttgagcc 1091
>gb|AC163041.3| Mus musculus BAC clone RP23-32K16 from chromosome 12, complete sequence Length = 254666 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 67225 ttttatttattttttatttattat 67248
>ref|XM_508004.1| PREDICTED: Pan troglodytes similar to suppressor of fused (LOC450699), mRNA Length = 1987 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 452 tgccctgcccgttccactgc 433
>gb|AC112953.15| Mus musculus chromosome 7, clone RP23-44J21, complete sequence Length = 205513 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttattat 26 ||||||||||||||||||| |||| Sbjct: 111936 ttttatttatcttttattttttat 111913
>gb|AC150650.5| Bos taurus BAC CH240-447L3 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 148126 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 5417 ttttatttatattttatttattat 5394
>gb|AC149095.2| Pan troglodytes BAC clone CH251-141L12 from Y, complete sequence Length = 170577 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 83734 gttttatttatcttttattt 83715
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 519 ggtgaaggcgacgccgctgatgtc 542 |||||||||||||||| ||||||| Sbjct: 2928511 ggtgaaggcgacgccgatgatgtc 2928534
>gb|BC013291.2| Homo sapiens suppressor of fused homolog (Drosophila), mRNA (cDNA clone MGC:3346 IMAGE:3533158), complete cds Length = 2238 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 822 tgccctgcccgttccactgc 803
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tggcgacgtactgggcgctg 498 |||||||||||||||||||| Sbjct: 4381343 tggcgacgtactgggcgctg 4381324
>gb|AC006377.3| Homo sapiens BAC clone RP11-450H7 from 7, complete sequence Length = 176463 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 101728 ttttatttattttttatttattat 101705
>emb|CT010434.8| Mouse DNA sequence from clone RP23-225H9 on chromosome 17, complete sequence Length = 218000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ttatttatcttttatttatt 24 |||||||||||||||||||| Sbjct: 190996 ttatttatcttttatttatt 191015
>gb|AC125466.4| Mus musculus BAC clone RP23-477O24 from chromosome 9, complete sequence Length = 150128 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattat 26 ||||||||||| |||||||||||| Sbjct: 66445 ttttatttatcatttatttattat 66468
>gb|AC114822.7| Mus musculus BAC clone RP23-113A12 from 2, complete sequence Length = 209762 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcttttatttattatacagg 31 |||||||||||||||||||| Sbjct: 171856 tcttttatttattatacagg 171837
>emb|BX936280.10| Platypus DNA sequence from clone XX-452D13, complete sequence Length = 122600 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttatttatcttttatttatt 24 |||||||||||||||||||| Sbjct: 80078 ttatttatcttttatttatt 80059
>gb|AC122002.2| Mus musculus BAC clone RP24-335H15 from 7, complete sequence Length = 114070 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttatttatcttttatttatt 24 |||||||||||||||||||| Sbjct: 26928 ttatttatcttttatttatt 26909
>gb|AY358550.1| Homo sapiens clone DNA33455 SUFU (UNQ650) mRNA, complete cds Length = 1855 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 801 tgccctgcccgttccactgc 782
>gb|AC119242.5| Mus musculus chromosome 6, clone RP24-229C13, complete sequence Length = 189108 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 atttatcttttatttattat 26 |||||||||||||||||||| Sbjct: 180783 atttatcttttatttattat 180764
>gb|AC115747.8| Mus musculus chromosome 10, clone RP23-8P5, complete sequence Length = 193706 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttttatttatcttttattta 22 |||||||||||||||||||| Sbjct: 39530 ttttatttatcttttattta 39549
>emb|CR361556.8| Zebrafish DNA sequence from clone DKEY-97G1 in linkage group 24, complete sequence Length = 106934 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttatttatcttttatttatt 24 |||||||||||||||||||| Sbjct: 77956 ttatttatcttttatttatt 77937
>emb|AL953850.2| Human DNA sequence from clone RP11-346A18 on chromosome X, complete sequence Length = 84527 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 9469 ttttatttattttttatttattat 9446
>emb|AL445675.9| Human DNA sequence from clone RP11-498M14 on chromosome 1 Contains a CpG island, complete sequence Length = 171985 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttattat 26 |||||||| ||||||||||||||| Sbjct: 77321 ttttatttttcttttatttattat 77298
>emb|AL391121.29| Human DNA sequence from clone RP11-47A8 on chromosome 10 Contains the 3' end of the SUFU gene for suppressor of fused homolog (Drosophila), the TRIM8 gene for tripartite motif-containing 8, the ARL3 gene for ADP-ribosylation factor-like 3, the SFXN2 gene for sideroflexin 2 and three CpG islands, complete sequence Length = 166600 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 3043 tgccctgcccgttccactgc 3024
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgagaatctgcgcgaagaag 186 |||||||||||||||||||| Sbjct: 1947702 cgagaatctgcgcgaagaag 1947721
>emb|AL161624.7| Human DNA sequence from clone RP11-487I9 on chromosome X Contains part of the DIAPH2 gene for Drosophila diaphanous homolog 2 and the 3' end of a novel gene (EPAG), complete sequence Length = 133021 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 64695 ttttatttattttttatttattat 64718
>emb|AL157360.8| Human DNA sequence from clone RP11-111C7 on chromosome 13, complete sequence Length = 148861 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttttatttatcttttattta 22 |||||||||||||||||||| Sbjct: 147754 ttttatttatcttttattta 147735
>emb|AL035413.19|HS657E11 Human DNA sequence from clone RP4-657E11 on chromosome 1p35.1-36.23 Contains the 5' end of a novel gene, the C1orf33 gene for chromosome 1 open reading frame 33, four novel genes, the AKR7A3 gene for aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase), the AKR7A2 gene for aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase), the 3' end of the CAPZB gene for capping protein (actin filament) muscle Z-line, beta and two CpG islands, complete sequence Length = 154130 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 70810 ttttatttattttttatttattat 70833
>gb|AF479057.1| Triticum aestivum ocs-element binding factor 1 mRNA, partial cds Length = 633 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 525 ggcgacgccgctgatgtcctcgacgacg 552 |||||||||||||| |||||||||||| Sbjct: 485 ggcgacgccgctgaactcctcgacgacg 458
>gb|AC165890.2| Mus musculus 6 BAC RP24-133O13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 164670 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 atttatcttttatttattat 26 |||||||||||||||||||| Sbjct: 43787 atttatcttttatttattat 43768
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 tcttgccgagaatctgcgcg 180 |||||||||||||||||||| Sbjct: 3357779 tcttgccgagaatctgcgcg 3357760
>emb|AL008970.3|PFMAL3P4 Plasmodium falciparum MAL3P4 Length = 113880 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tatcttttatttattataca 29 |||||||||||||||||||| Sbjct: 39106 tatcttttatttattataca 39125
>emb|BX908767.8| Zebrafish DNA sequence from clone DKEY-66B12 in linkage group 3, complete sequence Length = 177868 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 38356 gttttatttatcttttattt 38375
>emb|AL669856.6| Mouse DNA sequence from clone RP23-46I13 on chromosome 11 Contains part of the Slit 3 gene for slit homolog 3 (Drosophila), a novel gene and a ribosomal protein L21 (Rpl21) pseudogene, complete sequence Length = 264752 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 98045 gttttatttatcttttattt 98026
>emb|CR354591.13| Zebrafish DNA sequence from clone DKEY-18L4 in linkage group 24, complete sequence Length = 218314 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 178249 ttttatttatattttatttattat 178272
>emb|BX548022.6| Zebrafish DNA sequence from clone DKEY-108E7 in linkage group 24, complete sequence Length = 133412 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttatttatcttttatttatt 24 |||||||||||||||||||| Sbjct: 120564 ttatttatcttttatttatt 120545
>gb|AC104249.7| Homo sapiens chromosome 11, clone RP11-1084A14, complete sequence Length = 171265 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ttttatttatcttttattta 22 |||||||||||||||||||| Sbjct: 46388 ttttatttatcttttattta 46369
>gb|AC124231.17| Mus musculus chromosome 18, clone RP23-17N19, complete sequence Length = 219005 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 180844 gttttatttatcttttattt 180863
>dbj|BS000653.1| Pan troglodytes chromosome Y clone:PTB-017B13, complete sequences Length = 157263 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 122445 gttttatttatcttttattt 122464
>gb|AC105908.5| Homo sapiens chromosome 11, clone RP11-636L13, complete sequence Length = 176485 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttttatttatcttttattta 22 |||||||||||||||||||| Sbjct: 31192 ttttatttatcttttattta 31211
>emb|BX530022.5| Zebrafish DNA sequence from clone DKEY-29A22 in linkage group 21, complete sequence Length = 139415 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttat 23 |||||||||||||||||||| Sbjct: 48158 tttatttatcttttatttat 48139
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 14682017 gttttatttatcttttattt 14681998
>gb|U34017.1|PSU34017 Pyrrhulina sp. large subunit rRNA gene, mitochondrial gene encoding mitochondrial rRNA, partial sequence Length = 524 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 gttttatttatcttttatttatta 25 ||||| |||||||||||||||||| Sbjct: 262 gttttgtttatcttttatttatta 239
>gb|AC146722.16| Medicago truncatula clone mth2-23c16, complete sequence Length = 121968 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tatttatcttttatttatta 25 |||||||||||||||||||| Sbjct: 56376 tatttatcttttatttatta 56395
>gb|AC016395.5| Homo sapiens chromosome 10 clone RP11-153K11, complete sequence Length = 166869 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttatttatcttttatttatt 24 |||||||||||||||||||| Sbjct: 140700 ttatttatcttttatttatt 140681
>dbj|AB185280.1| Oryza sativa (japonica cultivar-group) OsOBF1 mRNA for bZIP protein, complete cds Length = 1277 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 525 ggcgacgccgctgatgtcctcgacgacg 552 |||||||||||||| |||||||||||| Sbjct: 876 ggcgacgccgctgaactcctcgacgacg 849
>ref|NM_143398.2| Drosophila melanogaster CG1951-RA (CG1951), mRNA Length = 3235 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 3169 gttttatttatcttttattt 3188
>gb|AC019077.9| Homo sapiens BAC clone RP11-323J4 from 4, complete sequence Length = 190437 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 tttatttatcttttatttattata 27 ||||||||| |||||||||||||| Sbjct: 118406 tttatttattttttatttattata 118383
>gb|AY069624.1| Drosophila melanogaster LD39455 full length cDNA Length = 3215 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 3099 gttttatttatcttttattt 3118
>emb|AL929297.10| Zebrafish DNA sequence from clone DKEY-21K4 in linkage group 5, complete sequence Length = 104074 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattat 26 ||||||||||||||| |||||||| Sbjct: 94372 ttttatttatcttttgtttattat 94395
>emb|BX322620.13| Zebrafish DNA sequence from clone DKEY-49L3 in linkage group 13, complete sequence Length = 192504 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tttatttatcttttatttat 23 |||||||||||||||||||| Sbjct: 84811 tttatttatcttttatttat 84830
>dbj|AB168864.1| Macaca fascicularis testis cDNA, clone: QtsA-15450, similar to human suppressor of fused homolog (Drosophila) (SUFU), mRNA, RefSeq: NM_016169.2 Length = 1900 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 836 tgccctgcccgttccactgc 817
>gb|AF175770.1|AF175770 Homo sapiens suppressor of fused mRNA, complete cds Length = 2239 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 821 tgccctgcccgttccactgc 802
>gb|AC078961.23| Homo sapiens 4 BAC RP11-486H4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179762 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 tttatttatcttttatttattata 27 ||||||||| |||||||||||||| Sbjct: 105718 tttatttattttttatttattata 105741
>emb|BX247872.12| Zebrafish DNA sequence from clone CH211-223M9, complete sequence Length = 199873 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttat 23 |||||||||||||||||||| Sbjct: 105129 tttatttatcttttatttat 105110
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 525 ggcgacgccgctgatgtcctcgacgacg 552 |||||||||||||| |||||||||||| Sbjct: 23001902 ggcgacgccgctgaactcctcgacgacg 23001875
>gb|AC108026.5| Homo sapiens BAC clone RP11-41E15 from 4, complete sequence Length = 123902 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 51908 ttttatttattttttatttattat 51931
>emb|BX511264.7| Zebrafish DNA sequence from clone DKEY-31O6 in linkage group 21, complete sequence Length = 145605 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttat 23 |||||||||||||||||||| Sbjct: 58370 tttatttatcttttatttat 58351
>gb|AC007947.5|AC007947 Drosophila melanogaster, chromosome 3R, region 98F-98F, BAC clone BACR11O03, complete sequence Length = 168505 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 67460 gttttatttatcttttattt 67479
>gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence Length = 413138 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 112850 ttttatttattttttatttattat 112827
>gb|AC115599.2| Dictyostelium discoideum chromosome 2 map 4229098-4354721 strain AX4, complete sequence Length = 125623 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 96577 ttttatttattttttatttattat 96600
>emb|BX072570.4| Zebrafish DNA sequence from clone DKEY-17E6 in linkage group 12, complete sequence Length = 171655 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ttgttttgttgatcatttcgatat 66 ||||||||||||||||||| |||| Sbjct: 162004 ttgttttgttgatcatttctatat 162027
>emb|BX005029.13| Zebrafish DNA sequence from clone CH211-182D3 in linkage group 5, complete sequence Length = 128948 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 7340 ttttatttattttttatttattat 7363
>emb|AL929009.5| Zebrafish DNA sequence from clone CH211-202A8 in linkage group 24, complete sequence Length = 208279 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 6139 ttttatttatgttttatttattat 6116
>gb|AF222345.1|AF222345 Homo sapiens suppressor of fused variant 3 mRNA, alternatively spliced, complete cds Length = 2601 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 729 tgccctgcccgttccactgc 710
>gb|AF159447.1|AF159447 Homo sapiens Suppressor of Fused mRNA, alternatively spliced form 2, complete cds Length = 4898 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 801 tgccctgcccgttccactgc 782
>gb|AF144231.1|AF144231 Homo sapiens Suppressor of Fused mRNA, alternatively spliced, complete cds Length = 1838 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 801 tgccctgcccgttccactgc 782
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 tgctggcgacgtactgggcg 495 |||||||||||||||||||| Sbjct: 318971 tgctggcgacgtactgggcg 318952
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tggcgctggtgaaggcgacg 531 |||||||||||||||||||| Sbjct: 1429753 tggcgctggtgaaggcgacg 1429772
>emb|BX255881.9| Zebrafish DNA sequence from clone CH211-268E23 in linkage group 20, complete sequence Length = 163427 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 tttatttatcttttatttattata 27 |||||||||||||| ||||||||| Sbjct: 147468 tttatttatcttttttttattata 147445
>emb|CR388011.14| Zebrafish DNA sequence from clone CH211-135J15 in linkage group 19, complete sequence Length = 163300 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 tttatttatcttttatttattata 27 ||||||||| |||||||||||||| Sbjct: 129972 tttatttatattttatttattata 129949
>gb|AY108024.1| Zea mays PCO086173 mRNA sequence Length = 469 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 525 ggcgacgccgctgatgtcctcgacgacg 552 |||||||||||||| |||||||||||| Sbjct: 189 ggcgacgccgctgaactcctcgacgacg 162
>gb|AF172319.1|AF172319 Homo sapiens suppressor of fused mRNA, partial cds Length = 2071 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 651 tgccctgcccgttccactgc 632
>ref|NM_016169.2| Homo sapiens suppressor of fused homolog (Drosophila) (SUFU), mRNA Length = 4898 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 801 tgccctgcccgttccactgc 782
>emb|CT025700.16| Mouse DNA sequence from clone RP24-151J17 on chromosome 17, complete sequence Length = 178486 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 4084 ttttatttattttttatttattat 4107
>gb|AE003767.2| Drosophila melanogaster chromosome 3R, section 105 of 118 of the complete sequence Length = 231562 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 229665 gttttatttatcttttattt 229684
>gb|AY449460.1| Oikopleura dioica clone BACOIKO004 7xk22, complete sequence Length = 131867 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttat 23 |||||||||||||||||||| Sbjct: 58225 tttatttatcttttatttat 58206
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 tttatttatcttttatttattata 27 ||||||||| |||||||||||||| Sbjct: 597524 tttatttattttttatttattata 597547
>dbj|AP002812.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-91P24, complete sequences Length = 169250 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttat 23 |||||||||||||||||||| Sbjct: 132878 tttatttatcttttatttat 132859
>emb|CT573016.5| Mouse DNA sequence from clone RP23-78E16 on chromosome 13, complete sequence Length = 211097 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tttatcttttatttattata 27 |||||||||||||||||||| Sbjct: 50354 tttatcttttatttattata 50373
>gb|AC118222.8| Mus musculus chromosome 13, clone RP23-277M5, complete sequence Length = 175089 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tttatttatcttttatttat 23 |||||||||||||||||||| Sbjct: 62979 tttatttatcttttatttat 62960
>gb|U65940.1|SSU65940 Streptomyces sp. cyt P-450-9-deoxo-FK506 hydroxylase (fkbD) and 31-O-demethyl-FK506 methyltransferase (fkbM) genes, complete cds Length = 2500 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tgcgcgaagaagtcgtcggt 194 |||||||||||||||||||| Sbjct: 737 tgcgcgaagaagtcgtcggt 718
>emb|CT571249.11| Mouse DNA sequence from clone RP24-92E16 on chromosome 13, complete sequence Length = 125655 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 tttatcttttatttattata 27 |||||||||||||||||||| Sbjct: 56105 tttatcttttatttattata 56086
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 525 ggcgacgccgctgatgtcctcgacgacg 552 |||||||||||||| |||||||||||| Sbjct: 22930093 ggcgacgccgctgaactcctcgacgacg 22930066
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 525 ggcgacgccgctgatgtcctcgacgacg 552 |||||||||||||| |||||||||||| Sbjct: 111179 ggcgacgccgctgaactcctcgacgacg 111152
>emb|AL935064.7| Zebrafish DNA sequence from clone CH211-153K23, complete sequence Length = 157256 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ttttatttatcttttatttattat 26 ||||||||||||||| |||||||| Sbjct: 43446 ttttatttatcttttgtttattat 43469
>gb|AC140941.1| Gallus gallus BAC clone TAM32-50C3 from chromosome ul, complete sequence Length = 116265 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 tcggtgtacccactcttcat 209 |||||||||||||||||||| Sbjct: 55286 tcggtgtacccactcttcat 55267
>gb|AC144631.3| Mus musculus BAC clone RP23-112C14 from 3, complete sequence Length = 179548 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tatttatcttttatttatta 25 |||||||||||||||||||| Sbjct: 80809 tatttatcttttatttatta 80790
>emb|BX000438.7| Zebrafish DNA sequence from clone CH211-209M20 in linkage group 20, complete sequence Length = 195087 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ttttatttatcttttatttattat 26 |||||||||| ||||||||||||| Sbjct: 156702 ttttatttattttttatttattat 156679
>emb|BX088728.23| Zebrafish DNA sequence from clone CH211-126J24, complete sequence Length = 168184 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 tttatttatcttttatttattata 27 ||||||||| |||||||||||||| Sbjct: 127308 tttatttattttttatttattata 127331
>emb|CT009618.10| Zebrafish DNA sequence from clone CH73-147E18 in linkage group 5, complete sequence Length = 71914 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 55477 gttttatttatcttttattt 55458
>dbj|AP004967.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT27L02, TM0144, complete sequence Length = 89959 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gttttatttatcttttattt 21 |||||||||||||||||||| Sbjct: 64812 gttttatttatcttttattt 64831
>emb|AL844856.6| Mouse DNA sequence from clone RP23-377G1 on chromosome 4, complete sequence Length = 183318 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gcacttgttttgttgatcat 58 |||||||||||||||||||| Sbjct: 175299 gcacttgttttgttgatcat 175280
>emb|AL669966.10| Mouse DNA sequence from clone RP23-174K9 on chromosome 4, complete sequence Length = 199890 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 tttatttatcttttatttattata 27 ||||||||| |||||||||||||| Sbjct: 45204 tttatttattttttatttattata 45227
>emb|AL731709.19| Mouse DNA sequence from clone RP23-316M14 on chromosome 2, complete sequence Length = 211034 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tattatacagggcataaagc 40 |||||||||||||||||||| Sbjct: 66085 tattatacagggcataaagc 66104
>emb|AL929043.7| Mouse DNA sequence from clone RP23-58H6 on chromosome 2, complete sequence Length = 164834 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcttttatttattatacagg 31 |||||||||||||||||||| Sbjct: 75868 tcttttatttattatacagg 75849
>gb|AY081822.1|Y081818S05 Homo sapiens suppressor of fused (SUFU) gene, exon 5 Length = 205 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tgccctgcccgttccactgc 414 |||||||||||||||||||| Sbjct: 106 tgccctgcccgttccactgc 87
>dbj|AP002015.3| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2013O23, complete sequence Length = 88065 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 tttatttatcttttatttattata 27 ||||||||| |||||||||||||| Sbjct: 27924 tttatttattttttatttattata 27901 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,625,955 Number of Sequences: 3902068 Number of extensions: 4625955 Number of successful extensions: 121469 Number of sequences better than 10.0: 160 Number of HSP's better than 10.0 without gapping: 159 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 120236 Number of HSP's gapped (non-prelim): 1219 length of query: 586 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 563 effective length of database: 17,143,297,704 effective search space: 9651676607352 effective search space used: 9651676607352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
