ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19o24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017011.1| Zea mays clone EK07D2310H07.c mRNA sequence 196 7e-47
2gb|AY112167.1| Zea mays CL15172_1 mRNA sequence 196 7e-47
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 153 9e-34
4gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 153 9e-34
5gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare str... 153 9e-34
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 153 9e-34
7gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 153 9e-34
8dbj|AK069374.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 9e-34
9dbj|AK061143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 9e-34
10ref|NM_197745.1| Oryza sativa (japonica cultivar-group) putative... 50 0.009
11gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 gen... 50 0.009
12gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 gen... 50 0.009
13dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
14dbj|AK110882.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.009
16emb|AL096863.13|HS1119I23 Human DNA sequence from clone RP5-1119... 48 0.037
17emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 46 0.15
18ref|NM_125544.3| Arabidopsis thaliana oxidoreductase/ zinc ion b... 44 0.58
19gb|AC116903.3| Homo sapiens chromosome 15, clone RP11-152L20, co... 44 0.58
20emb|BX829585.1|CNS0A17R Arabidopsis thaliana Full-length cDNA Co... 44 0.58
21emb|BX832833.1|CNS0A0KZ Arabidopsis thaliana Full-length cDNA Co... 44 0.58
22emb|BX830697.1|CNS0A0OC Arabidopsis thaliana Full-length cDNA Co... 44 0.58
23emb|BX830690.1|CNS0A0QY Arabidopsis thaliana Full-length cDNA Co... 44 0.58
24gb|BT004198.1| Arabidopsis thaliana clone RAFL15-28-A20 (R20893)... 44 0.58
25gb|AY087625.1| Arabidopsis thaliana clone 37197 mRNA, complete s... 44 0.58
26dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.58
27gb|AC005319.1|AC005319 Human Chromosome 15q26.1 PAC clone pDJ430... 44 0.58
28ref|NM_001031354.1| Gallus gallus nicalin homolog (zebrafish) (N... 42 2.3
29gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 42 2.3
30emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 2.3
31emb|AL713915.10| Mouse DNA sequence from clone RP23-437C4 on chr... 42 2.3
32emb|AJ720462.1| Gallus gallus mRNA for hypothetical protein, clo... 42 2.3
33gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 42 2.3
34gb|AC153939.3| Mus musculus 10 BAC RP24-173I5 (Roswell Park Canc... 42 2.3
35gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.3
36dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 2.3
37dbj|D15073.1|XANHEMA Xanthomonas campestris pv. phaseoli hemA ge... 42 2.3
38gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 2.3
39gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 2.3
40gb|AC152980.2| Mus musculus 10 BAC RP23-462F3 (Roswell Park Canc... 42 2.3
41gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 9.1
42gb|DQ211890.1| Planotortrix notophaea actin gene, partial cds 40 9.1
43gb|DQ211889.1| Planotortrix octo actin gene, partial cds 40 9.1
44gb|DQ211888.1| Planotortrix excessana actin gene, partial cds 40 9.1
45gb|DQ211887.1| Ctenopseustis obliquana actin gene, partial cds 40 9.1
46gb|DQ211886.1| Ctenopseustis herana actin gene, partial cds 40 9.1
47gb|AY540995.1| Achromobacter xylosoxidans subsp. denitrificans s... 40 9.1
48gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial ... 40 9.1
49gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 9.1
50gb|AE002122.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 40 9.1
51gb|AC124181.3| Mus musculus BAC clone RP23-204B12 from chromosom... 40 9.1
52gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole b... 40 9.1
53ref|XM_754931.1| Ustilago maydis 521 hypothetical protein (UM038... 40 9.1
54ref|XM_650906.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 9.1
55gb|AC148448.3| Pan troglodytes chromosome X clone PTB-007I07 map... 40 9.1
56emb|AL138826.15| Human DNA sequence from clone RP11-156F16 on ch... 40 9.1
57emb|AL109801.14|HSJ738A13 Human DNA sequence from clone RP4-738A... 40 9.1
58emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 40 9.1
59emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 40 9.1
60emb|AJ519536.1|MSE519536 Manduca sexta mRNA for non-muscle actin... 40 9.1
61gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 9.1
62gb|AC103586.3| Homo sapiens chromosome 3 clone RP11-79P21, compl... 40 9.1
63dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
64dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
65gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 9.1
66gb|AC010209.14| Homo sapiens 12 BAC RP11-427C3 (Roswell Park Can... 40 9.1
67gb|AC010200.8| Homo sapiens 12 BAC RP11-575G13 (Roswell Park Can... 40 9.1
68gb|AC092758.3| Papio anubis clone RP41-22J16, complete sequence 40 9.1
69gb|AC069298.8|AC069298 Homo sapiens chromosome 3 clone RP11-56K2... 40 9.1
70gb|AC073525.25| Homo sapiens 12 BAC RP11-81K13 (Roswell Park Can... 40 9.1
71dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
72dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
73dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
74emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chr... 40 9.1
75gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.1
76emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC... 40 9.1
77gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, com... 40 9.1 
>gb|BT017011.1| Zea mays clone EK07D2310H07.c mRNA sequence
          Length = 1147

 Score =  196 bits (99), Expect = 7e-47
 Identities = 234/279 (83%)
 Strand = Plus / Minus

                                                                       
Query: 269 gtgcagcaccccgttggccacgttggcaaacacctcgcccgccgcctccagcagctcgtc 328
           ||||||||||||||| || || ||||||||||||||||| || | |||||||||||| ||
Sbjct: 940 gtgcagcaccccgttagcgacattggcaaacacctcgccggctgactccagcagctcatc 881

                                                                       
Query: 329 gcgggtgcccgtgtagtgcatcatgctcggcctcgtcaggaacagcgacttggacgccag 388
            |||||  | ||||| ||||| | ||| || |  || |||||||  |||||||| |||||
Sbjct: 880 acgggtagcagtgtaatgcatgaggctaggacgagtgaggaacaaggacttggaagccag 821

                                                                       
Query: 389 gtcgcccatggagatcgggtcgggcgagcccgaggactgcccgaacgacaccaggaaacc 448
           ||||| | | | ||| ||||| ||   ||| || |||||||| |||||||||||||| ||
Sbjct: 820 gtcgctcgttgggattgggtcaggtttgcctgacgactgcccaaacgacaccaggaagcc 761

                                                                       
Query: 449 gcggggcgccaggcactccagggatgccttgtatgtgtcctttccaacagaatcatagac 508
           ||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 760 gcgggacgccaagcactccagggaagccttgtatgtatcctttccaacagaatcatagac 701

                                                  
Query: 509 cacatttacaccttttccacctgtaatctccttgactct 547
            ||||| |||||||||||   |||||| |||||||||||
Sbjct: 700 gacattgacaccttttcctgatgtaatatccttgactct 662
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>gb|AY112167.1| Zea mays CL15172_1 mRNA sequence
          Length = 996

 Score =  196 bits (99), Expect = 7e-47
 Identities = 234/279 (83%)
 Strand = Plus / Plus

                                                                       
Query: 269 gtgcagcaccccgttggccacgttggcaaacacctcgcccgccgcctccagcagctcgtc 328
           ||||||||||||||| || || ||||||||||||||||| || | |||||||||||| ||
Sbjct: 613 gtgcagcaccccgttagcgacattggcaaacacctcgccggctgactccagcagctcatc 672

                                                                       
Query: 329 gcgggtgcccgtgtagtgcatcatgctcggcctcgtcaggaacagcgacttggacgccag 388
            |||||  | ||||| ||||| | ||| || |  || |||||||  |||||||| |||||
Sbjct: 673 acgggtagcagtgtaatgcatgaggctaggacgagtgaggaacaaggacttggaagccag 732

                                                                       
Query: 389 gtcgcccatggagatcgggtcgggcgagcccgaggactgcccgaacgacaccaggaaacc 448
           ||||| | | | ||| ||||| ||   ||| || |||||||| |||||||||||||| ||
Sbjct: 733 gtcgctcgttgggattgggtcaggtttgcctgacgactgcccaaacgacaccaggaagcc 792

                                                                       
Query: 449 gcggggcgccaggcactccagggatgccttgtatgtgtcctttccaacagaatcatagac 508
           ||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 793 gcgggacgccaagcactccagggaagccttgtatgtatcctttccaacagaatcatagac 852

                                                  
Query: 509 cacatttacaccttttccacctgtaatctccttgactct 547
            ||||| |||||||||||   |||||| |||||||||||
Sbjct: 853 gacattgacaccttttcctgatgtaatatccttgactct 891
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  153 bits (77), Expect = 9e-34
 Identities = 157/184 (85%)
 Strand = Plus / Plus

                                                                          
Query: 475    ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 534
              |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| |
Sbjct: 102273 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 102332

                                                                          
Query: 535    tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 594
               |||||||||||| ||  ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 102333 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 102392

                                                                          
Query: 595    ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 654
              ||  |  |||  |||  || ||||| |||||||||||||| || |||||||| |||||||
Sbjct: 102393 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 102452

                  
Query: 655    nggc 658
               |||
Sbjct: 102453 gggc 102456



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                          
Query: 291    ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 350
              |||||||||||||| || |||| |||||||| ||||||||||||  | ||||| ||||||
Sbjct: 101714 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 101773

                                            
Query: 351    atgctcggcctcgtcaggaacagcgacttg 380
              | ||| ||||| || |  ||||||||||||
Sbjct: 101774 aggctgggccttgttaccaacagcgacttg 101803
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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score =  153 bits (77), Expect = 9e-34
 Identities = 157/184 (85%)
 Strand = Plus / Plus

                                                                         
Query: 475   ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 534
             |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| |
Sbjct: 36273 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 36332

                                                                         
Query: 535   tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 594
              |||||||||||| ||  ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 36333 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 36392

                                                                         
Query: 595   ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 654
             ||  |  |||  |||  || ||||| |||||||||||||| || |||||||| |||||||
Sbjct: 36393 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 36452

                 
Query: 655   nggc 658
              |||
Sbjct: 36453 gggc 36456



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                         
Query: 291   ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 350
             |||||||||||||| || |||| |||||||| ||||||||||||  | ||||| ||||||
Sbjct: 35714 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 35773

                                           
Query: 351   atgctcggcctcgtcaggaacagcgacttg 380
             | ||| ||||| || |  ||||||||||||
Sbjct: 35774 aggctgggccttgttaccaacagcgacttg 35803
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>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0079B22, from chromosome 3, complete sequence
          Length = 125217

 Score =  153 bits (77), Expect = 9e-34
 Identities = 157/184 (85%)
 Strand = Plus / Minus

                                                                         
Query: 475   ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 534
             |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| |
Sbjct: 22945 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 22886

                                                                         
Query: 535   tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 594
              |||||||||||| ||  ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 22885 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 22826

                                                                         
Query: 595   ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 654
             ||  |  |||  |||  || ||||| |||||||||||||| || |||||||| |||||||
Sbjct: 22825 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 22766

                 
Query: 655   nggc 658
              |||
Sbjct: 22765 gggc 22762



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                         
Query: 291   ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 350
             |||||||||||||| || |||| |||||||| ||||||||||||  | ||||| ||||||
Sbjct: 23504 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 23445

                                           
Query: 351   atgctcggcctcgtcaggaacagcgacttg 380
             | ||| ||||| || |  ||||||||||||
Sbjct: 23444 aggctgggccttgttaccaacagcgacttg 23415
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score =  153 bits (77), Expect = 9e-34
 Identities = 157/184 (85%)
 Strand = Plus / Plus

                                                                          
Query: 475    ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 534
              |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| |
Sbjct: 102273 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 102332

                                                                          
Query: 535    tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 594
               |||||||||||| ||  ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 102333 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 102392

                                                                          
Query: 595    ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 654
              ||  |  |||  |||  || ||||| |||||||||||||| || |||||||| |||||||
Sbjct: 102393 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 102452

                  
Query: 655    nggc 658
               |||
Sbjct: 102453 gggc 102456



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                          
Query: 291    ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 350
              |||||||||||||| || |||| |||||||| ||||||||||||  | ||||| ||||||
Sbjct: 101714 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 101773

                                            
Query: 351    atgctcggcctcgtcaggaacagcgacttg 380
              | ||| ||||| || |  ||||||||||||
Sbjct: 101774 aggctgggccttgttaccaacagcgacttg 101803
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>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score =  153 bits (77), Expect = 9e-34
 Identities = 157/184 (85%)
 Strand = Plus / Minus

                                                                          
Query: 475    ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 534
              |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| |
Sbjct: 160295 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 160236

                                                                          
Query: 535    tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 594
               |||||||||||| ||  ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 160235 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 160176

                                                                          
Query: 595    ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 654
              ||  |  |||  |||  || ||||| |||||||||||||| || |||||||| |||||||
Sbjct: 160175 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 160116

                  
Query: 655    nggc 658
               |||
Sbjct: 160115 gggc 160112



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                          
Query: 291    ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 350
              |||||||||||||| || |||| |||||||| ||||||||||||  | ||||| ||||||
Sbjct: 160854 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 160795

                                            
Query: 351    atgctcggcctcgtcaggaacagcgacttg 380
              | ||| ||||| || |  ||||||||||||
Sbjct: 160794 aggctgggccttgttaccaacagcgacttg 160765
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>dbj|AK069374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012O14, full
           insert sequence
          Length = 1280

 Score =  153 bits (77), Expect = 9e-34
 Identities = 157/184 (85%)
 Strand = Plus / Minus

                                                                       
Query: 475 ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 534
           |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| |
Sbjct: 720 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 661

                                                                       
Query: 535 tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 594
            |||||||||||| ||  ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 660 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 601

                                                                       
Query: 595 ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 654
           ||  |  |||  |||  || ||||| |||||||||||||| || |||||||| |||||||
Sbjct: 600 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 541

               
Query: 655 nggc 658
            |||
Sbjct: 540 gggc 537



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 75/90 (83%)
 Strand = Plus / Minus

                                                                       
Query: 291 ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 350
           |||||||||||||| || |||| |||||||| ||||||||||||  | | ||| ||||||
Sbjct: 904 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagcgtaatgcatc 845

                                         
Query: 351 atgctcggcctcgtcaggaacagcgacttg 380
           | ||| ||||| || |  ||||||||||||
Sbjct: 844 aggctgggccttgttaccaacagcgacttg 815
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>dbj|AK061143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C09, full
           insert sequence
          Length = 1172

 Score =  153 bits (77), Expect = 9e-34
 Identities = 157/184 (85%)
 Strand = Plus / Minus

                                                                       
Query: 475 ccttgtatgtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaa 534
           |||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| |||| |
Sbjct: 725 ccttgtatgtatccttgccaacagaatcatataccacattgacacctttcccagctgtga 666

                                                                       
Query: 535 tctccttgactctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccat 594
            |||||||||||| ||  ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 665 actccttgactcttgtgacaacatcttcctttgtgtaaatgatgacatggtggcatccat 606

                                                                       
Query: 595 ctagatgtgcaagtgaggctttctcttcatttgaaacagttccaatgacagtagcaccaa 654
           ||  |  |||  |||  || ||||| |||||||||||||| || |||||||| |||||||
Sbjct: 605 cttcagctgcctgtgcagccttctcctcatttgaaacagtcccgatgacagtggcaccaa 546

               
Query: 655 nggc 658
            |||
Sbjct: 545 gggc 542



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                       
Query: 291 ttggcaaacacctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatc 350
           |||||||||||||| || |||| |||||||| ||||||||||||  | ||||| ||||||
Sbjct: 909 ttggcaaacacctcaccggccgactccagcaactcgtcgcgggtagcagtgtaatgcatc 850

                                         
Query: 351 atgctcggcctcgtcaggaacagcgacttg 380
           | ||| ||||| || |  ||||||||||||
Sbjct: 849 aggctgggccttgttaccaacagcgacttg 820
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>ref|NM_197745.1| Oryza sativa (japonica cultivar-group) putative quinone
           oxidoreductase (OSJNBa0042H09.11), mRNA
          Length = 1014

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                       
Query: 300 acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 359
           |||||||| || || | ||||||||||||||||||| | ||||||||| |||| |  |||
Sbjct: 863 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 804

                                        
Query: 360 ctcgtcaggaacagcgacttggacgccag 388
           ||   || || ||| ||||||||||||||
Sbjct: 803 ctgcccaagatcagggacttggacgccag 775
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>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence,
            complete sequence
          Length = 144191

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                        
Query: 300  acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 359
            |||||||| || || | ||||||||||||||||||| | ||||||||| |||| |  |||
Sbjct: 9868 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 9927

                                         
Query: 360  ctcgtcaggaacagcgacttggacgccag 388
            ||   || || ||| ||||||||||||||
Sbjct: 9928 ctgcccaagatcagggacttggacgccag 9956
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>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete
             sequence
          Length = 132927

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                         
Query: 300   acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 359
             |||||||| || || | ||||||||||||||||||| | ||||||||| |||| |  |||
Sbjct: 32093 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 32034

                                          
Query: 360   ctcgtcaggaacagcgacttggacgccag 388
             ||   || || ||| ||||||||||||||
Sbjct: 32033 ctgcccaagatcagggacttggacgccag 32005
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                            
Query: 300      acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 359
                |||||||| || || | ||||||||||||||||||| | ||||||||| |||| |  |||
Sbjct: 21600189 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 21600130

                                             
Query: 360      ctcgtcaggaacagcgacttggacgccag 388
                ||   || || ||| ||||||||||||||
Sbjct: 21600129 ctgcccaagatcagggacttggacgccag 21600101
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>dbj|AK110882.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-G10, full
            insert sequence
          Length = 1832

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 300  acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 359
            |||||||| || || | ||||||||||||||||||| | ||||||||| |||| |  |||
Sbjct: 1379 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 1320

                                         
Query: 360  ctcgtcaggaacagcgacttggacgccag 388
            ||   || || ||| ||||||||||||||
Sbjct: 1319 ctgcccaagatcagggacttggacgccag 1291
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                            
Query: 300      acctcgcccgccgcctccagcagctcgtcgcgggtgcccgtgtagtgcatcatgctcggc 359
                |||||||| || || | ||||||||||||||||||| | ||||||||| |||| |  |||
Sbjct: 21611852 acctcgccggcggcgtgcagcagctcgtcgcgggtggcggtgtagtgcctcatccctggc 21611793

                                             
Query: 360      ctcgtcaggaacagcgacttggacgccag 388
                ||   || || ||| ||||||||||||||
Sbjct: 21611792 ctgcccaagatcagggacttggacgccag 21611764
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>emb|AL096863.13|HS1119I23 Human DNA sequence from clone RP5-1119I23 on chromosome 10, complete
             sequence
          Length = 98818

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 614   tttctcttcatttgaaacagttcc 637
             ||||||||||||||||||||||||
Sbjct: 92090 tttctcttcatttgaaacagttcc 92067
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 301     cctcgcccgccgcctccagcagc 323
               |||||||||||||||||||||||
Sbjct: 4938237 cctcgcccgccgcctccagcagc 4938259
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>ref|NM_125544.3| Arabidopsis thaliana oxidoreductase/ zinc ion binding AT5G61510
           mRNA, complete cds
          Length = 1383

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 91/114 (79%)
 Strand = Plus / Minus

                                                                       
Query: 483 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 542
           ||||| ||||| ||||| ||||| || |||||||| ||||| ||   |||||| || |||
Sbjct: 931 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 872

                                                                 
Query: 543 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 596
           |||| ||   ||| ||| || ||  ||||||| || ||||||||||||||||||
Sbjct: 871 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 818
to top
>gb|AC116903.3| Homo sapiens chromosome 15, clone RP11-152L20, complete sequence
          Length = 159893

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 25     acagacagataagaggaatcag 46
              ||||||||||||||||||||||
Sbjct: 121299 acagacagataagaggaatcag 121278
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>emb|BX829585.1|CNS0A17R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB22ZG08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1315

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 91/114 (79%)
 Strand = Plus / Minus

                                                                       
Query: 483 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 542
           ||||| ||||| ||||| ||||| || |||||||| ||||| ||   |||||| || |||
Sbjct: 931 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 872

                                                                 
Query: 543 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 596
           |||| ||   ||| ||| || ||  ||||||| || ||||||||||||||||||
Sbjct: 871 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 818
to top
>emb|BX832833.1|CNS0A0KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL15ZF07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1259

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 91/114 (79%)
 Strand = Plus / Minus

                                                                       
Query: 483 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 542
           ||||| ||||| ||||| ||||| || |||||||| ||||| ||   |||||| || |||
Sbjct: 841 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 782

                                                                 
Query: 543 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 596
           |||| ||   ||| ||| || ||  ||||||| || ||||||||||||||||||
Sbjct: 781 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 728
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>emb|BX830697.1|CNS0A0OC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS15ZE06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1225

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 91/114 (79%)
 Strand = Plus / Minus

                                                                       
Query: 483 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 542
           ||||| ||||| ||||| ||||| || |||||||| ||||| ||   |||||| || |||
Sbjct: 814 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 755

                                                                 
Query: 543 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 596
           |||| ||   ||| ||| || ||  ||||||| || ||||||||||||||||||
Sbjct: 754 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 701
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>emb|BX830690.1|CNS0A0QY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS14ZE11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1278

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 91/114 (79%)
 Strand = Plus / Minus

                                                                       
Query: 483 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 542
           ||||| ||||| ||||| ||||| || |||||||| ||||| ||   |||||| || |||
Sbjct: 877 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 818

                                                                 
Query: 543 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 596
           |||| ||   ||| ||| || ||  ||||||| || ||||||||||||||||||
Sbjct: 817 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 764
to top
>gb|BT004198.1| Arabidopsis thaliana clone RAFL15-28-A20 (R20893) putative quinone
           oxidoreductase (At5g61510) mRNA, complete cds
          Length = 1061

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 91/114 (79%)
 Strand = Plus / Minus

                                                                       
Query: 483 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 542
           ||||| ||||| ||||| ||||| || |||||||| ||||| ||   |||||| || |||
Sbjct: 701 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 642

                                                                 
Query: 543 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 596
           |||| ||   ||| ||| || ||  ||||||| || ||||||||||||||||||
Sbjct: 641 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 588
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>gb|AY087625.1| Arabidopsis thaliana clone 37197 mRNA, complete sequence
          Length = 1313

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 91/114 (79%)
 Strand = Plus / Minus

                                                                       
Query: 483 gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 542
           ||||| ||||| ||||| ||||| || |||||||| ||||| ||   |||||| || |||
Sbjct: 894 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 835

                                                                 
Query: 543 actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 596
           |||| ||   ||| ||| || ||  ||||||| || ||||||||||||||||||
Sbjct: 834 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 781
to top
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9
          Length = 69142

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 91/114 (79%)
 Strand = Plus / Plus

                                                                         
Query: 483   gtgtcctttccaacagaatcatagaccacatttacaccttttccacctgtaatctccttg 542
             ||||| ||||| ||||| ||||| || |||||||| ||||| ||   |||||| || |||
Sbjct: 12055 gtgtcttttcccacagagtcataaacaacatttactcctttacccgatgtaatgtcattg 12114

                                                                   
Query: 543   actctggttgcaacatcttcctttgtgtacatgatcacatggtggcatccatct 596
             |||| ||   ||| ||| || ||  ||||||| || ||||||||||||||||||
Sbjct: 12115 actcgggaaacaaaatcctcgttcttgtacataataacatggtggcatccatct 12168
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>gb|AC005319.1|AC005319 Human Chromosome 15q26.1 PAC clone pDJ430i19, complete sequence
          Length = 118741

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 25    acagacagataagaggaatcag 46
             ||||||||||||||||||||||
Sbjct: 40499 acagacagataagaggaatcag 40478
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>ref|NM_001031354.1| Gallus gallus nicalin homolog (zebrafish) (NCLN), mRNA
          Length = 2928

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 297 aacacctcgcccgccgcctccagca 321
           ||||||||||||||| |||||||||
Sbjct: 79  aacacctcgcccgcctcctccagca 55
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 310    ccgcctccagcagctcgtcgcgggtgccc 338
              ||||| |||||||||||||| ||||||||
Sbjct: 702474 ccgccaccagcagctcgtcgtgggtgccc 702446
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 316     ccagcagctcgtcgcgggtgc 336
               |||||||||||||||||||||
Sbjct: 1106318 ccagcagctcgtcgcgggtgc 1106338
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>emb|AL713915.10| Mouse DNA sequence from clone RP23-437C4 on chromosome 11 Contains part
              of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila),
              complete sequence
          Length = 201133

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 451    ggggcgccaggcactccagggatgc 475
              ||||| |||||||||||||||||||
Sbjct: 192385 ggggcaccaggcactccagggatgc 192409
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>emb|AJ720462.1| Gallus gallus mRNA for hypothetical protein, clone 18d18
          Length = 2928

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 297 aacacctcgcccgccgcctccagca 321
           ||||||||||||||| |||||||||
Sbjct: 79  aacacctcgcccgcctcctccagca 55
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 290    gttggcaaacacctcgcccgccgcc 314
              |||||||||| ||||||||||||||
Sbjct: 386806 gttggcaaactcctcgcccgccgcc 386830
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>gb|AC153939.3| Mus musculus 10 BAC RP24-173I5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 145018

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 90     tgtggattgtagagcacaaac 110
              |||||||||||||||||||||
Sbjct: 125066 tgtggattgtagagcacaaac 125086
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 308     cgccgcctccagcagctcgtcgcgg 332
               |||||||||||||| ||||||||||
Sbjct: 4611889 cgccgcctccagcacctcgtcgcgg 4611865
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 189     gaccccgaggtcttccgggcc 209
               |||||||||||||||||||||
Sbjct: 1363152 gaccccgaggtcttccgggcc 1363132
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>dbj|D15073.1|XANHEMA Xanthomonas campestris pv. phaseoli hemA gene for glutamyl-tRNA
            reductase, complete cds
          Length = 1549

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 316  ccagcagctcgtcgcgggtgc 336
            |||||||||||||||||||||
Sbjct: 1268 ccagcagctcgtcgcgggtgc 1248
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 311     cgcctccagcagctcgtcgcgggtg 335
               ||||||||||||||| |||||||||
Sbjct: 3723564 cgcctccagcagctcctcgcgggtg 3723588



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 304     cgcccgccgcctccagcagc 323
               ||||||||||||||||||||
Sbjct: 1521881 cgcccgccgcctccagcagc 1521862
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 189     gaccccgaggtcttccgggcc 209
               |||||||||||||||||||||
Sbjct: 1039588 gaccccgaggtcttccgggcc 1039568
to top
>gb|AC152980.2| Mus musculus 10 BAC RP23-462F3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 165602

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 90     tgtggattgtagagcacaaac 110
              |||||||||||||||||||||
Sbjct: 130961 tgtggattgtagagcacaaac 130941
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 299     cacctcgcccgccgcctcca 318
               ||||||||||||||||||||
Sbjct: 2718068 cacctcgcccgccgcctcca 2718087
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>gb|DQ211890.1| Planotortrix notophaea actin gene, partial cds
          Length = 965

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ccgccgcctccagcagctcg 326
           ||||||||||||||||||||
Sbjct: 623 ccgccgcctccagcagctcg 642
to top
>gb|DQ211889.1| Planotortrix octo actin gene, partial cds
          Length = 962

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ccgccgcctccagcagctcg 326
           ||||||||||||||||||||
Sbjct: 620 ccgccgcctccagcagctcg 639
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>gb|DQ211888.1| Planotortrix excessana actin gene, partial cds
          Length = 965

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ccgccgcctccagcagctcg 326
           ||||||||||||||||||||
Sbjct: 623 ccgccgcctccagcagctcg 642
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>gb|DQ211887.1| Ctenopseustis obliquana actin gene, partial cds
          Length = 958

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ccgccgcctccagcagctcg 326
           ||||||||||||||||||||
Sbjct: 623 ccgccgcctccagcagctcg 642
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>gb|DQ211886.1| Ctenopseustis herana actin gene, partial cds
          Length = 964

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ccgccgcctccagcagctcg 326
           ||||||||||||||||||||
Sbjct: 622 ccgccgcctccagcagctcg 641
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>gb|AY540995.1| Achromobacter xylosoxidans subsp. denitrificans strain EST4002 plasmid
             pEST4011, complete sequence
          Length = 76958

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   gccgcctccagcagctcgtc 328
             ||||||||||||||||||||
Sbjct: 72235 gccgcctccagcagctcgtc 72254
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>gb|DQ232586.1| Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence
          Length = 114045

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   tgtgcagcaccccgttggcc 287
             ||||||||||||||||||||
Sbjct: 94142 tgtgcagcaccccgttggcc 94161
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 266     ggtgtgcagcaccccgttggccacgttg 293
               ||||||||||||| ||||||| ||||||
Sbjct: 5382285 ggtgtgcagcaccacgttggcgacgttg 5382312
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>gb|AE002122.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 23 of 59 of the
            complete genome
          Length = 20866

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 621  tcatttgaaacagttccaat 640
            ||||||||||||||||||||
Sbjct: 8084 tcatttgaaacagttccaat 8065
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>gb|AC124181.3| Mus musculus BAC clone RP23-204B12 from chromosome 18, complete
             sequence
          Length = 220244

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    agatgcaactccaactcctg 71
             ||||||||||||||||||||
Sbjct: 93053 agatgcaactccaactcctg 93072
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>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene
             cluster, complete sequence
          Length = 84868

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   ccgccgcctccagcagctcg 326
             ||||||||||||||||||||
Sbjct: 43145 ccgccgcctccagcagctcg 43164
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>ref|XM_754931.1| Ustilago maydis 521 hypothetical protein (UM03877.1) partial mRNA
          Length = 3063

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  cgccgcctccagcagctcgt 327
            ||||||||||||||||||||
Sbjct: 2228 cgccgcctccagcagctcgt 2247
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>ref|XM_650906.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (19.t00053)
            partial mRNA
          Length = 3666

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 613  ctttctcttcatttgaaacagttccaat 640
            |||| |||||||||||||||||| ||||
Sbjct: 3112 ctttttcttcatttgaaacagtttcaat 3085
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>gb|AC148448.3| Pan troglodytes chromosome X clone PTB-007I07 map human ortholog
            q22.1, complete sequence
          Length = 44375

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   agacagacagataagaggaa 42
            ||||||||||||||||||||
Sbjct: 4142 agacagacagataagaggaa 4123
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>emb|AL138826.15| Human DNA sequence from clone RP11-156F16 on chromosome 6p11.1-12.3,
            complete sequence
          Length = 62464

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 127  tttattccttcttctcctac 146
            ||||||||||||||||||||
Sbjct: 7943 tttattccttcttctcctac 7924
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>emb|AL109801.14|HSJ738A13 Human DNA sequence from clone RP4-738A13 on chromosome Xq21.31-22.1
             Contains the 5' end of the TAF7L gene for TAF7-like RNA
             polymerase II 50kDa TATA box binding protein
             (TBP)-associated factor and a CpG island, complete
             sequence
          Length = 46775

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    agacagacagataagaggaa 42
             ||||||||||||||||||||
Sbjct: 39988 agacagacagataagaggaa 39969
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 51     cagatgcaactccaactcctgcca 74
              ||||||||||| ||||||||||||
Sbjct: 214793 cagatgcaacttcaactcctgcca 214816
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    acctcgcccgccgcctccag 319
              ||||||||||||||||||||
Sbjct: 201653 acctcgcccgccgcctccag 201634
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>emb|AJ519536.1|MSE519536 Manduca sexta mRNA for non-muscle actin (act3 gene)
          Length = 1466

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 307 ccgccgcctccagcagctcg 326
           ||||||||||||||||||||
Sbjct: 760 ccgccgcctccagcagctcg 779
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 266     ggtgtgcagcaccccgttggccacgttg 293
               ||||||||| ||| ||||||||||||||
Sbjct: 5997977 ggtgtgcagtaccacgttggccacgttg 5998004
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>gb|AC103586.3| Homo sapiens chromosome 3 clone RP11-79P21, complete sequence
          Length = 174912

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   ttcctttgtgtacatgatca 579
             ||||||||||||||||||||
Sbjct: 53006 ttcctttgtgtacatgatca 53025
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 74       aacatatttacatgcatgtg 93
                ||||||||||||||||||||
Sbjct: 27564218 aacatatttacatgcatgtg 27564237
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 74       aacatatttacatgcatgtg 93
                ||||||||||||||||||||
Sbjct: 11103922 aacatatttacatgcatgtg 11103903
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 302     ctcgcccgccgcctccagca 321
               ||||||||||||||||||||
Sbjct: 1726026 ctcgcccgccgcctccagca 1726045
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>gb|AC010209.14| Homo sapiens 12 BAC RP11-427C3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 191148

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 621   tcatttgaaacagttccaat 640
             ||||||||||||||||||||
Sbjct: 37859 tcatttgaaacagttccaat 37840
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>gb|AC010200.8| Homo sapiens 12 BAC RP11-575G13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 158149

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 621   tcatttgaaacagttccaat 640
             ||||||||||||||||||||
Sbjct: 34791 tcatttgaaacagttccaat 34810
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>gb|AC092758.3| Papio anubis clone RP41-22J16, complete sequence
          Length = 171690

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    agacagacagataagaggaa 42
             ||||||||||||||||||||
Sbjct: 61567 agacagacagataagaggaa 61586
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>gb|AC069298.8|AC069298 Homo sapiens chromosome 3 clone RP11-56K23, complete sequence
          Length = 158073

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 560   ttcctttgtgtacatgatca 579
             ||||||||||||||||||||
Sbjct: 90973 ttcctttgtgtacatgatca 90992
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>gb|AC073525.25| Homo sapiens 12 BAC RP11-81K13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 142475

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 497    agaatcatagaccacattta 516
              ||||||||||||||||||||
Sbjct: 115302 agaatcatagaccacattta 115283
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>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_E11
          Length = 133524

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    aacatatttacatgcatgtg 93
             ||||||||||||||||||||
Sbjct: 86616 aacatatttacatgcatgtg 86597
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>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_D08
          Length = 119557

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    aacatatttacatgcatgtg 93
             ||||||||||||||||||||
Sbjct: 23101 aacatatttacatgcatgtg 23082
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>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1479_B11
          Length = 105702

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aacatatttacatgcatgtg 93
             ||||||||||||||||||||
Sbjct: 46508 aacatatttacatgcatgtg 46527
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>emb|BX000474.13| Mouse DNA sequence from clone RP24-80C21 on chromosome 2, complete
              sequence
          Length = 205184

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 458    caggcactccagggatgcct 477
              ||||||||||||||||||||
Sbjct: 166812 caggcactccagggatgcct 166831
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 74      aacatatttacatgcatgtg 93
               ||||||||||||||||||||
Sbjct: 5055272 aacatatttacatgcatgtg 5055253
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>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1,
             ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10,
             ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and
             ORF19
          Length = 86080

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   ccgccgcctccagcagctcg 326
             ||||||||||||||||||||
Sbjct: 43063 ccgccgcctccagcagctcg 43082
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>gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, complete sequence
          Length = 99448

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   gccgcctccagcagctcgtc 328
             ||||||||||||||||||||
Sbjct: 44079 gccgcctccagcagctcgtc 44098


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,918,784
Number of Sequences: 3902068
Number of extensions: 5918784
Number of successful extensions: 109752
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108499
Number of HSP's gapped (non-prelim): 1251
length of query: 665
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 642
effective length of database: 17,143,297,704
effective search space: 11005997125968
effective search space used: 11005997125968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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