ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19o20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069184.1| Oryza sativa (japonica cultivar-group) cDNA clon... 353 4e-94
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 210 4e-51
3gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare str... 210 4e-51
4gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare str... 210 4e-51
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
6gb|AY110393.1| Zea mays CL5132_1 mRNA sequence 180 3e-42
7dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 44 0.47
8gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 44 0.47
9gb|AY840979.1| Bifidobacterium breve prophage-like element, comp... 44 0.47
10gb|AC113550.11| Mus musculus chromosome 6, clone RP23-275L12, co... 42 1.9
11emb|AL357493.8| Human DNA sequence from clone RP11-439A17 on chr... 42 1.9
12dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 42 1.9
13gb|AY566569.1| Felis catus myocilin mRNA, complete cds 42 1.9
14dbj|AP004542.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 1.9
15gb|AC132127.3| Mus musculus BAC clone RP23-408B15 from chromosom... 40 7.3
16ref|XM_380597.1| Gibberella zeae PH-1 chromosome 1 METK_NEUCR S-... 40 7.3
17gb|AC102083.12| Mus musculus chromosome 16, clone RP23-269L18, c... 40 7.3
18emb|AL158012.14| Human DNA sequence from clone RP11-157A10 on ch... 40 7.3
19emb|BX004803.11| Zebrafish DNA sequence from clone CH211-119C20 ... 40 7.3
20emb|CR383677.15| Zebrafish DNA sequence from clone CH211-157P16 ... 40 7.3
21gb|DQ397877.1| Cenarchaeum symbiosum clone C06F03, complete sequ... 40 7.3
22gb|AY122115.1| Drosophila melanogaster GH17337 full insert cDNA 40 7.3
23ref|NM_167656.1| Drosophila melanogaster 6-phosphofructo-2-kinas... 40 7.3
24ref|NM_167655.1| Drosophila melanogaster 6-phosphofructo-2-kinas... 40 7.3
25ref|NM_167654.1| Drosophila melanogaster 6-phosphofructo-2-kinas... 40 7.3
26ref|NM_167653.1| Drosophila melanogaster 6-phosphofructo-2-kinas... 40 7.3
27ref|NM_167652.1| Drosophila melanogaster 6-phosphofructo-2-kinas... 40 7.3
28ref|NM_167651.1| Drosophila melanogaster 6-phosphofructo-2-kinas... 40 7.3
29ref|NM_058104.4| Drosophila melanogaster 6-phosphofructo-2-kinas... 40 7.3
30ref|NM_058103.2| Drosophila melanogaster 6-phosphofructo-2-kinas... 40 7.3
31gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, r... 40 7.3
32gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, r... 40 7.3
33emb|CR385044.5| Zebrafish DNA sequence from clone CH211-51N14 in... 40 7.3
34gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ... 40 7.3
35gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.3
36dbj|AB023511.1| Drosophila melanogaster mRNA for 6-phosphofructo... 40 7.3
37dbj|AB023510.1| Drosophila melanogaster mRNA for 6-phosphofructo... 40 7.3 
>dbj|AK069184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009A17, full
           insert sequence
          Length = 1154

 Score =  353 bits (178), Expect = 4e-94
 Identities = 319/366 (87%)
 Strand = Plus / Minus

                                                                       
Query: 176 gaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccactccc 235
           |||||||||||| |||||||| |||||||||||||||||||| ||||| |  || |||||
Sbjct: 729 gaacaccacattggtgatgtccgggaacttctccttgatggccgccttgatcccgctccc 670

                                                                       
Query: 236 gatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagcacctc 295
           ||||||||| ||||| |||||| | |||||||||||||||||||| ||||| | ||||||
Sbjct: 669 gatggactcggggccttcgtacctcaccaggcagtcctcgccgtcgacggcgaccacctc 610

                                                                       
Query: 296 cacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttcaccgc 355
           ||| |||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||
Sbjct: 609 cacgctcccgccgtagttggcgatcgccggccgcagtatgtccaggtggccgttcaccgc 550

                                                                       
Query: 356 ctcaggcgtcgtctcttcgggttgctggtccccgtcgaacacctggcggatgtccttgat 415
           ||  ||||| | |||  | || ||||| ||  ||||||||||||||||||| || || | 
Sbjct: 549 ctggggcgttggctccgccggctgctgatcgtcgtcgaacacctggcggatatcttttac 490

                                                                       
Query: 416 ggcgtcaccgaacttctccttgagcactcgctcgatgcccatgttcatcgtcgtcgtcga 475
           |||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 489 ggcgtcgccgaacttctccttgagcacgcgctcgatgcccatcttcatcgtcgtcgtcga 430

                                                                       
Query: 476 gctgggacaactgctgcacgccccttcaagcctaagggagacgacgccgtcctctacgga 535
           |||||| || |||| |||||| ||||| ||| | ||||||| |||||||||||| |||||
Sbjct: 429 gctggggcagctgccgcacgctccttcgagcttgagggagatgacgccgtcctcgacgga 370

                 
Query: 536 cacgac 541
           | ||||
Sbjct: 369 cgcgac 364
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  210 bits (106), Expect = 4e-51
 Identities = 163/182 (89%)
 Strand = Plus / Minus

                                                                            
Query: 176      gaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccactccc 235
                |||||||||||| |||||||| |||||||||||||||||||| ||||| |  || |||||
Sbjct: 11245910 gaacaccacattggtgatgtccgggaacttctccttgatggccgccttgatcccgctccc 11245851

                                                                            
Query: 236      gatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagcacctc 295
                ||||||||| ||||| |||||| | |||||||||||||||||||| ||||| | ||||||
Sbjct: 11245850 gatggactcggggccttcgtacctcaccaggcagtcctcgccgtcgacggcgaccacctc 11245791

                                                                            
Query: 296      cacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttcaccgc 355
                ||| |||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||
Sbjct: 11245790 cacgctcccgccgtagttggcgatcgccggccgcagtatgtccaggtggccgttcaccgc 11245731

                  
Query: 356      ct 357
                ||
Sbjct: 11245730 ct 11245729



 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                            
Query: 388      cgtcgaacacctggcggatgtccttgatggcgtcaccgaacttctccttgagcactcgct 447
                ||||||||||||||||||| || || | |||||| |||||||||||||||||||| ||||
Sbjct: 11245624 cgtcgaacacctggcggatatcttttacggcgtcgccgaacttctccttgagcacgcgct 11245565

                                                                 
Query: 448      cgatgcccatgttcatcgtcgtcgtcgagctgggacaactgctgcacgc 496
                |||||||||| ||||||||||||||||||||||| || |||| ||||||
Sbjct: 11245564 cgatgcccatcttcatcgtcgtcgtcgagctggggcagctgccgcacgc 11245516



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 510      agggagacgacgccgtcctctacggacacgac 541
                ||||||| |||||||||||| |||||| ||||
Sbjct: 11245372 agggagatgacgccgtcctcgacggacgcgac 11245341
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>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0085H08, from chromosome 3, complete sequence
          Length = 130656

 Score =  210 bits (106), Expect = 4e-51
 Identities = 163/182 (89%)
 Strand = Plus / Minus

                                                                         
Query: 176   gaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccactccc 235
             |||||||||||| |||||||| |||||||||||||||||||| ||||| |  || |||||
Sbjct: 24863 gaacaccacattggtgatgtccgggaacttctccttgatggccgccttgatcccgctccc 24804

                                                                         
Query: 236   gatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagcacctc 295
             ||||||||| ||||| |||||| | |||||||||||||||||||| ||||| | ||||||
Sbjct: 24803 gatggactcggggccttcgtacctcaccaggcagtcctcgccgtcgacggcgaccacctc 24744

                                                                         
Query: 296   cacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttcaccgc 355
             ||| |||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||
Sbjct: 24743 cacgctcccgccgtagttggcgatcgccggccgcagtatgtccaggtggccgttcaccgc 24684

               
Query: 356   ct 357
             ||
Sbjct: 24683 ct 24682



 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                         
Query: 388   cgtcgaacacctggcggatgtccttgatggcgtcaccgaacttctccttgagcactcgct 447
             ||||||||||||||||||| || || | |||||| |||||||||||||||||||| ||||
Sbjct: 24577 cgtcgaacacctggcggatatcttttacggcgtcgccgaacttctccttgagcacgcgct 24518

                                                              
Query: 448   cgatgcccatgttcatcgtcgtcgtcgagctgggacaactgctgcacgc 496
             |||||||||| ||||||||||||||||||||||| || |||| ||||||
Sbjct: 24517 cgatgcccatcttcatcgtcgtcgtcgagctggggcagctgccgcacgc 24469



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 510   agggagacgacgccgtcctctacggacacgac 541
             ||||||| |||||||||||| |||||| ||||
Sbjct: 24325 agggagatgacgccgtcctcgacggacgcgac 24294
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>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0085H08, from chromosome 3, complete sequence
          Length = 126708

 Score =  210 bits (106), Expect = 4e-51
 Identities = 163/182 (89%)
 Strand = Plus / Plus

                                                                         
Query: 176   gaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccactccc 235
             |||||||||||| |||||||| |||||||||||||||||||| ||||| |  || |||||
Sbjct: 35138 gaacaccacattggtgatgtccgggaacttctccttgatggccgccttgatcccgctccc 35197

                                                                         
Query: 236   gatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagcacctc 295
             ||||||||| ||||| |||||| | |||||||||||||||||||| ||||| | ||||||
Sbjct: 35198 gatggactcggggccttcgtacctcaccaggcagtcctcgccgtcgacggcgaccacctc 35257

                                                                         
Query: 296   cacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttcaccgc 355
             ||| |||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||
Sbjct: 35258 cacgctcccgccgtagttggcgatcgccggccgcagtatgtccaggtggccgttcaccgc 35317

               
Query: 356   ct 357
             ||
Sbjct: 35318 ct 35319



 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Plus

                                                                         
Query: 388   cgtcgaacacctggcggatgtccttgatggcgtcaccgaacttctccttgagcactcgct 447
             ||||||||||||||||||| || || | |||||| |||||||||||||||||||| ||||
Sbjct: 35424 cgtcgaacacctggcggatatcttttacggcgtcgccgaacttctccttgagcacgcgct 35483

                                                              
Query: 448   cgatgcccatgttcatcgtcgtcgtcgagctgggacaactgctgcacgc 496
             |||||||||| ||||||||||||||||||||||| || |||| ||||||
Sbjct: 35484 cgatgcccatcttcatcgtcgtcgtcgagctggggcagctgccgcacgc 35532



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 510   agggagacgacgccgtcctctacggacacgac 541
             ||||||| |||||||||||| |||||| ||||
Sbjct: 35676 agggagatgacgccgtcctcgacggacgcgac 35707
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  210 bits (106), Expect = 4e-51
 Identities = 163/182 (89%)
 Strand = Plus / Minus

                                                                            
Query: 176      gaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccactccc 235
                |||||||||||| |||||||| |||||||||||||||||||| ||||| |  || |||||
Sbjct: 11242673 gaacaccacattggtgatgtccgggaacttctccttgatggccgccttgatcccgctccc 11242614

                                                                            
Query: 236      gatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagcacctc 295
                ||||||||| ||||| |||||| | |||||||||||||||||||| ||||| | ||||||
Sbjct: 11242613 gatggactcggggccttcgtacctcaccaggcagtcctcgccgtcgacggcgaccacctc 11242554

                                                                            
Query: 296      cacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttcaccgc 355
                ||| |||||||||||||| ||||||||||| ||||||||||||||||| | |||||||||
Sbjct: 11242553 cacgctcccgccgtagttggcgatcgccggccgcagtatgtccaggtggccgttcaccgc 11242494

                  
Query: 356      ct 357
                ||
Sbjct: 11242493 ct 11242492



 Score =  137 bits (69), Expect = 4e-29
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                            
Query: 388      cgtcgaacacctggcggatgtccttgatggcgtcaccgaacttctccttgagcactcgct 447
                ||||||||||||||||||| || || | |||||| |||||||||||||||||||| ||||
Sbjct: 11242387 cgtcgaacacctggcggatatcttttacggcgtcgccgaacttctccttgagcacgcgct 11242328

                                                                 
Query: 448      cgatgcccatgttcatcgtcgtcgtcgagctgggacaactgctgcacgc 496
                |||||||||| ||||||||||||||||||||||| || |||| ||||||
Sbjct: 11242327 cgatgcccatcttcatcgtcgtcgtcgagctggggcagctgccgcacgc 11242279



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 510      agggagacgacgccgtcctctacggacacgac 541
                ||||||| |||||||||||| |||||| ||||
Sbjct: 11242135 agggagatgacgccgtcctcgacggacgcgac 11242104
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>gb|AY110393.1| Zea mays CL5132_1 mRNA sequence
          Length = 844

 Score =  180 bits (91), Expect = 3e-42
 Identities = 163/187 (87%)
 Strand = Plus / Plus

                                                                       
Query: 172 gggtgaacaccacattcgtgatgtcggggaacttctccttgatggctgccttcactccac 231
           |||| ||||||||| | |||||||| ||||| |||||||||||||| ||||| |  || |
Sbjct: 285 gggtaaacaccacactggtgatgtccgggaatttctccttgatggccgccttgataccgc 344

                                                                       
Query: 232 tcccgatggactctgggccgtcgtacttaaccaggcagtcctcgccgtcaacggcaagca 291
           | |||||||| || || ||||||||| | ||||||||||||||||| || ||||| | ||
Sbjct: 345 tgccgatggattccggcccgtcgtacctcaccaggcagtcctcgccatcgacggccaaca 404

                                                                       
Query: 292 cctccacactcccgccgtagttcgcgatcgccggacgcagtatgtccaggtgccggttca 351
           | ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 405 catccacgctcccgccgtagttcgcgatcgctggccgcagtatgtccaggtgccggttca 464

                  
Query: 352 ccgcctc 358
           |||||||
Sbjct: 465 ccgcctc 471



 Score =  139 bits (70), Expect = 1e-29
 Identities = 127/146 (86%)
 Strand = Plus / Plus

                                                                       
Query: 389 gtcgaacacctggcggatgtccttgatggcgtcaccgaacttctccttgagcactcgctc 448
           |||||||||||| ||||| |||||||  ||||| |||||||||||||||||||| |||||
Sbjct: 502 gtcgaacacctgacggatttccttgaaagcgtcgccgaacttctccttgagcacacgctc 561

                                                                       
Query: 449 gatgcccatgttcatcgtcgtcgtcgagctgggacaactgctgcacgccccttcaagcct 508
           ||||||||| ||||||||||||||| ||||||| || |||| ||| || ||||| ||| |
Sbjct: 562 gatgcccatattcatcgtcgtcgtcaagctggggcagctgccgcaagctccttcgagctt 621

                                     
Query: 509 aagggagacgacgccgtcctctacgg 534
            ||||||| ||| |||||||| ||||
Sbjct: 622 gagggagatgacaccgtcctcgacgg 647
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 466     tcgtcgtcgagctgggacaact 487
               ||||||||||||||||||||||
Sbjct: 3863391 tcgtcgtcgagctgggacaact 3863412
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 466     tcgtcgtcgagctgggacaact 487
               ||||||||||||||||||||||
Sbjct: 3864065 tcgtcgtcgagctgggacaact 3864086
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>gb|AY840979.1| Bifidobacterium breve prophage-like element, complete sequence
          Length = 28155

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 195   tcggggaacttctccttgatgg 216
             ||||||||||||||||||||||
Sbjct: 19232 tcggggaacttctccttgatgg 19253
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>gb|AC113550.11| Mus musculus chromosome 6, clone RP23-275L12, complete sequence
          Length = 203865

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     caaaaattactccatttcatt 26
             |||||||||||||||||||||
Sbjct: 51486 caaaaattactccatttcatt 51466
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>emb|AL357493.8| Human DNA sequence from clone RP11-439A17 on chromosome 1 Contains four
              novel genes, a novel gene (MGC57827), a ribosomal protein
              L22 (RPL22) pseudogene, a histone 2 H3c (HIST2H3C)
              pseudogene, the HIST2H2BB gene for histone 2 H2bb, the
              FCGR1B gene for Fc fragment of IgG high affinity Ib
              receptor for (CD64) and three CpG islands, complete
              sequence
          Length = 189539

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 46     tttttctacccaaaggaaaca 66
              |||||||||||||||||||||
Sbjct: 114419 tttttctacccaaaggaaaca 114439
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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 189    gtgatgtcggggaacttctccttgatggc 217
              |||||||| ||| ||||||||||||||||
Sbjct: 739405 gtgatgtctgggtacttctccttgatggc 739377
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>gb|AY566569.1| Felis catus myocilin mRNA, complete cds
          Length = 2125

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 390 tcgaacacctggcggatgtcc 410
           |||||||||||||||||||||
Sbjct: 963 tcgaacacctggcggatgtcc 943
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>dbj|AP004542.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08G20, TM0102a,
             complete sequence
          Length = 54472

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    aaaatcttgttgtatttcgta 115
             |||||||||||||||||||||
Sbjct: 25196 aaaatcttgttgtatttcgta 25216
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>gb|AC132127.3| Mus musculus BAC clone RP23-408B15 from chromosome 16, complete sequence
          Length = 182676

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     ctccatttcattttccatcg 34
              ||||||||||||||||||||
Sbjct: 162667 ctccatttcattttccatcg 162686
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>ref|XM_380597.1| Gibberella zeae PH-1 chromosome 1 METK_NEUCR S-adenosylmethionine
           synthetase (Methionine adenosyltransferase) (AdoMet
           synthetase) (FG00421.1) partial mRNA
          Length = 1209

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 404 gatgtccttgatggcgtcac 423
           ||||||||||||||||||||
Sbjct: 288 gatgtccttgatggcgtcac 269
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>gb|AC102083.12| Mus musculus chromosome 16, clone RP23-269L18, complete sequence
          Length = 205875

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ctccatttcattttccatcg 34
             ||||||||||||||||||||
Sbjct: 11038 ctccatttcattttccatcg 11057
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>emb|AL158012.14| Human DNA sequence from clone RP11-157A10 on chromosome 9 Contains part
             of the gene for a novel GLI Kruppel family member zinc
             finger protein (FLJ38999), complete sequence
          Length = 124474

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ttttctacccaaaggaaaca 66
             ||||||||||||||||||||
Sbjct: 62534 ttttctacccaaaggaaaca 62515
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>emb|BX004803.11| Zebrafish DNA sequence from clone CH211-119C20 in linkage group 20
              Contains a novel gene simialr to human and mouse CASKIN2
              (CASK interacting protein 2), a novel gene for a
              nucleoside-diphosphate kinase (wu:fk59e05) and a CpG
              island, complete sequence
          Length = 167376

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     tactccatttcattttccat 32
              ||||||||||||||||||||
Sbjct: 166726 tactccatttcattttccat 166707
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>emb|CR383677.15| Zebrafish DNA sequence from clone CH211-157P16 in linkage group 12,
              complete sequence
          Length = 164387

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     tactccatttcattttccat 32
              ||||||||||||||||||||
Sbjct: 125318 tactccatttcattttccat 125337
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>gb|DQ397877.1| Cenarchaeum symbiosum clone C06F03, complete sequence
          Length = 37987

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   cgctcgatgcccatgttcat 463
             ||||||||||||||||||||
Sbjct: 13103 cgctcgatgcccatgttcat 13122
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>gb|AY122115.1| Drosophila melanogaster GH17337 full insert cDNA
          Length = 3398

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tcggggaacttctccttgat 214
            ||||||||||||||||||||
Sbjct: 2089 tcggggaacttctccttgat 2070
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>ref|NM_167656.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RI,
            transcript variant I (Pfrx), mRNA
          Length = 2980

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tcggggaacttctccttgat 214
            ||||||||||||||||||||
Sbjct: 1684 tcggggaacttctccttgat 1665
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>ref|NM_167655.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RH,
            transcript variant H (Pfrx), mRNA
          Length = 2987

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tcggggaacttctccttgat 214
            ||||||||||||||||||||
Sbjct: 1691 tcggggaacttctccttgat 1672
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>ref|NM_167654.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RF,
            transcript variant F (Pfrx), mRNA
          Length = 2919

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tcggggaacttctccttgat 214
            ||||||||||||||||||||
Sbjct: 1623 tcggggaacttctccttgat 1604
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>ref|NM_167653.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RE,
            transcript variant E (Pfrx), mRNA
          Length = 3184

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tcggggaacttctccttgat 214
            ||||||||||||||||||||
Sbjct: 1888 tcggggaacttctccttgat 1869
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>ref|NM_167652.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RD,
            transcript variant D (Pfrx), mRNA
          Length = 2990

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tcggggaacttctccttgat 214
            ||||||||||||||||||||
Sbjct: 1694 tcggggaacttctccttgat 1675
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>ref|NM_167651.1| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RA,
            transcript variant A (Pfrx), mRNA
          Length = 2983

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tcggggaacttctccttgat 214
            ||||||||||||||||||||
Sbjct: 1687 tcggggaacttctccttgat 1668
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>ref|NM_058104.4| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RB,
            transcript variant B (Pfrx), mRNA
          Length = 3383

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tcggggaacttctccttgat 214
            ||||||||||||||||||||
Sbjct: 2087 tcggggaacttctccttgat 2068
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>ref|NM_058103.2| Drosophila melanogaster 6-phosphofructo-2-kinase CG3400-RG,
            transcript variant G (Pfrx), mRNA
          Length = 2930

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tcggggaacttctccttgat 214
            ||||||||||||||||||||
Sbjct: 2087 tcggggaacttctccttgat 2068
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>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone
              BACR27L16, complete sequence
          Length = 182623

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    tcggggaacttctccttgat 214
              ||||||||||||||||||||
Sbjct: 110731 tcggggaacttctccttgat 110712
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>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone
             BACR10M08, complete sequence
          Length = 180213

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tcggggaacttctccttgat 214
             ||||||||||||||||||||
Sbjct: 49211 tcggggaacttctccttgat 49192
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>emb|CR385044.5| Zebrafish DNA sequence from clone CH211-51N14 in linkage group 20,
            complete sequence
          Length = 59170

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 13   tactccatttcattttccat 32
            ||||||||||||||||||||
Sbjct: 1350 tactccatttcattttccat 1331
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>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    tcggggaacttctccttgat 214
              ||||||||||||||||||||
Sbjct: 154977 tcggggaacttctccttgat 154958
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 261     accaggcagtcctcgccgtc 280
               ||||||||||||||||||||
Sbjct: 3198140 accaggcagtcctcgccgtc 3198159
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>dbj|AB023511.1| Drosophila melanogaster mRNA for 6-phosphofructo 2-kinase/fructose
            2,6-bisphosphatase long form, complete cds
          Length = 2939

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tcggggaacttctccttgat 214
            ||||||||||||||||||||
Sbjct: 2087 tcggggaacttctccttgat 2068
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>dbj|AB023510.1| Drosophila melanogaster mRNA for 6-phosphofructo 2-kinase/fructose
            2,6-bisphosphatase short form, complete cds
          Length = 2701

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  tcggggaacttctccttgat 214
            ||||||||||||||||||||
Sbjct: 1394 tcggggaacttctccttgat 1375


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,587,950
Number of Sequences: 3902068
Number of extensions: 3587950
Number of successful extensions: 96842
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96509
Number of HSP's gapped (non-prelim): 330
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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