Clone Name | rbasd19o19 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DMP1_BOVIN (Q95120) Dentin matrix acidic phosphoprotein 1 precur... | 28 | 7.0 | 2 | DEF_YERPE (Q8ZJ79) Peptide deformylase (EC 3.5.1.88) (PDF) (Poly... | 27 | 9.2 |
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>DMP1_BOVIN (Q95120) Dentin matrix acidic phosphoprotein 1 precursor (Dentin| matrix protein 1) (DMP-1) Length = 510 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Frame = -1 Query: 304 EHGSEDVLSQHRD----PAXKXRPGRGDARYQRDTRXHWLG 194 + G+ D S+ RD RP GD+ D+ HW+G Sbjct: 155 DEGARDTTSESRDLDREDEGNSRPEGGDSTPDSDSEEHWVG 195
>DEF_YERPE (Q8ZJ79) Peptide deformylase (EC 3.5.1.88) (PDF) (Polypeptide| deformylase) Length = 170 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = -2 Query: 345 EXHEQVAILADLSRNMDQRMSYLSTEIRRXXSDLG--EAMQGIREIRASI 202 + H+Q+ ++ D+S N DQR+ ++ E+ + G E I E RA + Sbjct: 53 DVHQQIIVI-DISENRDQRLVLINPELLEKSGETGIEEGCLSIPEQRALV 101 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,876,207 Number of Sequences: 219361 Number of extensions: 650313 Number of successful extensions: 1363 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1345 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1360 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)