Clone Name | rbasd19o15 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | QUA1_ARATH (Q9LSG3) Glycosyltransferase QUASIMODO1 (EC 2.4.1.-) | 146 | 6e-35 | 2 | GLTR_ARATH (Q9FWA4) Probable glycosyltransferase At3g02350 (EC 2... | 144 | 2e-34 | 3 | NS1_IADU3 (P08270) Nonstructural protein 1 (NS1) (NS1A) (Fragment) | 30 | 6.0 | 4 | METE_BUCAP (Q8KA71) 5-methyltetrahydropteroyltriglutamate--homoc... | 30 | 7.9 | 5 | NS1_IATRS (P08278) Nonstructural protein 1 (NS1) (NS1A) (Fragment) | 30 | 7.9 |
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>QUA1_ARATH (Q9LSG3) Glycosyltransferase QUASIMODO1 (EC 2.4.1.-)| Length = 559 Score = 146 bits (368), Expect = 6e-35 Identities = 58/95 (61%), Positives = 78/95 (82%) Frame = -2 Query: 634 YHFWQKLNEDGLLWKLGTLPPGLVTFWNKTFPLDRSWHVLGLGYNPHVSSRDLERAAVIH 455 YH+WQ LNE+ LWKLGTLPPGL+TF++ T PLD+SWHVLGLGYNP +S ++ AAV+H Sbjct: 462 YHYWQNLNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVVH 521 Query: 454 YNGNLKPWLEIGLPKFRSYWSKYLDYDQPFLRECN 350 +NGN+KPWL+I + +FR W+K++DYD F++ CN Sbjct: 522 FNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACN 556
>GLTR_ARATH (Q9FWA4) Probable glycosyltransferase At3g02350 (EC 2.4.1.-)| Length = 561 Score = 144 bits (364), Expect = 2e-34 Identities = 59/95 (62%), Positives = 77/95 (81%) Frame = -2 Query: 634 YHFWQKLNEDGLLWKLGTLPPGLVTFWNKTFPLDRSWHVLGLGYNPHVSSRDLERAAVIH 455 YH+WQ LNED LWKLGTLPPGL+TF++KT LD+SWHVLGLGYNP VS ++ A VIH Sbjct: 464 YHYWQNLNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGYNPGVSMDEIRNAGVIH 523 Query: 454 YNGNLKPWLEIGLPKFRSYWSKYLDYDQPFLRECN 350 YNGN+KPWL+I + +++S W+KY+D + F++ CN Sbjct: 524 YNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCN 558
>NS1_IADU3 (P08270) Nonstructural protein 1 (NS1) (NS1A) (Fragment)| Length = 227 Score = 30.0 bits (66), Expect = 6.0 Identities = 12/45 (26%), Positives = 24/45 (53%) Frame = -3 Query: 387 TLTMISLFCGNATSIREARPVPPTPSHSDSSLGSSVFDLFVSLDF 253 TL ++ F + + E P+P P H+D + +++ DL L++ Sbjct: 140 TLILLRAFTEDGAIVGEISPLPSLPGHTDEDVKNAIGDLIGGLEW 184
>METE_BUCAP (Q8KA71) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 757 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Frame = -2 Query: 574 PGLVTFWN---KTFPLDRSWHVLGLGYNPHVSSRDLERAAVIHYNGNLKPWLEIGLPKFR 404 P + FW+ + L++ +GL V + E+ +I + +P L GLP + Sbjct: 554 PVTILFWSFPREDISLEKIAKQIGLALRDEVLDLEKEKIEIIQID---EPALREGLPLRK 610 Query: 403 SYWSKYLDY 377 S W++YL + Sbjct: 611 SLWNEYLSW 619
>NS1_IATRS (P08278) Nonstructural protein 1 (NS1) (NS1A) (Fragment)| Length = 227 Score = 29.6 bits (65), Expect = 7.9 Identities = 12/45 (26%), Positives = 23/45 (51%) Frame = -3 Query: 387 TLTMISLFCGNATSIREARPVPPTPSHSDSSLGSSVFDLFVSLDF 253 TL ++ F + E P+P P H+D + +++ DL L++ Sbjct: 140 TLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGDLIGGLEW 184 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,623,020 Number of Sequences: 219361 Number of extensions: 2048894 Number of successful extensions: 5320 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 5199 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5319 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)