>ATPJ_YEAST (P81449) ATP synthase e chain, mitochondrial (EC 3.6.3.14)|
           (Translocase of the inner membrane protein 11)
          Length = 95

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 171 NYTRREKQVSYQHPYPLVIQLNKLSSSLSCFLPDEDAPPHGSLNLKPPN 317
           N  ++E+Q  Y+    LV +  K  + L   +  +D P + S NL+ PN
Sbjct: 28  NAKKKEEQAQYEEKLKLVEEAKKEYAKLHPVVTPKDVPANASFNLEDPN 76

>DMRT1_CHICK (Q9PTQ7) Doublesex- and mab-3-related transcription factor 1|
           (Fragment)
          Length = 311

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +3

Query: 183 REKQVSYQHPYPLVIQ----LNKLSSSLSCFLPDEDAPPHGS 296
           +E+++   HP PL       + K SSS SC L D  +P H +
Sbjct: 64  QEEELGISHPVPLPSAPEPVVKKSSSSSSCLLQDSSSPAHST 105

>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22|
          Length = 881

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 22/65 (33%), Positives = 30/65 (46%)
 Frame = +2

Query: 200 LPTSVSPSHPAQQAELFSQLLSS*RRCPTAWQP*S*ATQQQPYRMREHDHPRS*SPVQEK 379
           LP    P+ PA+ AE  S+ +SS   C T        T     R R + + R  SP + +
Sbjct: 623 LPKPTVPALPARDAESDSESVSSHSTCST-------CTGSSRSRSRSYSYSR--SPSRSR 673

Query: 380 GRRES 394
           GRR S
Sbjct: 674 GRRRS 678

>DNAA_CHLTE (Q8KGG6) Chromosomal replication initiator protein dnaA|
          Length = 493

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +3

Query: 444 HMLHLFFILQHVMASPSYLLHQTVINTTRGSPATVQASHQKD 569
           + +H+   L+ V+   + L++  VI+ ++G P T++  HQ D
Sbjct: 78  YSVHVKQALRQVIGPEAKLMYSIVIDKSQGQPVTIELPHQID 119

>LCE4A_HUMAN (Q5TA78) Late cornified envelope protein 4A (Late envelope protein|
           8) (Small proline-rich-like epidermal differentiation
           complex protein 4A)
          Length = 99

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +2

Query: 512 SHQHHPRFSCNRPGQSSKGLGAGDCMDRPNAENSKLCGCCGGRSKC 649
           SH  H R  C+RP  S       +C    + + S   GCC G   C
Sbjct: 61  SHHRHHRSHCHRPKSS-------NCYGSGSGQQSGGSGCCSGGGCC 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,795,063
Number of Sequences: 219361
Number of extensions: 2090633
Number of successful extensions: 4989
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4981
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6882837918
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)