ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19o01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197887.1| Oryza sativa (japonica cultivar-group) unknown ... 218 1e-53
2dbj|AK070910.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
3dbj|AK059043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
4gb|AY106906.1| Zea mays PCO076960 mRNA sequence 216 5e-53
5gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 gen... 121 2e-24
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
8ref|NM_001040357.1| Danio rerio zgc:136909 (zgc:136909), mRNA 42 1.6
9gb|AC099341.4| Homo sapiens BAC clone RP11-317C13 from 7, comple... 42 1.6
10gb|BC115324.1| Danio rerio cDNA clone MGC:136909 IMAGE:7993962, ... 42 1.6
11emb|BX322655.10| Zebrafish DNA sequence from clone DKEYP-53E12 i... 42 1.6
12ref|XM_695051.1| PREDICTED: Danio rerio similar to Protein C20or... 42 1.6
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
14gb|AC079584.4| Homo sapiens BAC clone CTD-2252P21 from 2, comple... 42 1.6
15dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
16dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
17dbj|AK121044.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
18gb|AC008372.6|AC008372 Homo sapiens chromosome 14 clones RP11-11... 42 1.6
19gb|AC102778.8| Mus musculus chromosome 3, clone RP23-19M24, comp... 40 6.4
20gb|AC110381.5| Mus musculus BAC clone RP24-198I16 from chromosom... 40 6.4
21gb|AC114919.5| Mus musculus BAC clone RP23-102A8 from 18, comple... 40 6.4
22emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete DNA s... 40 6.4
23gb|AC027020.12| Homo sapiens chromosome 15, clone RP11-526I2, co... 40 6.4
24gb|AC098822.3| Homo sapiens BAC clone RP11-338B23 from 4, comple... 40 6.4
25emb|CR628381.9| Zebrafish DNA sequence from clone DKEY-27I16 in ... 40 6.4
26gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome... 40 6.4 
>ref|NM_197887.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0027L23.9), mRNA
          Length = 1297

 Score =  218 bits (110), Expect = 1e-53
 Identities = 290/350 (82%)
 Strand = Plus / Minus

                                                                        
Query: 123  ataaaacttctacttactaggcgctcagtgtcacggaagcgacgctggacagcttgaact 182
            |||||| ||| ||| ||||||| ||||||||||| ||||| || || |||||||||||||
Sbjct: 1142 ataaaatttcaactcactaggcactcagtgtcacagaagcaacacttgacagcttgaact 1083

                                                                        
Query: 183  tccggactttcttggagtgcaacggctggaaaagaatctcggtgtactgcttcacggaga 242
            ||   ||||| || |||||||| ||||| |||||||| || || || || ||||| || |
Sbjct: 1082 tcttaacttttttcgagtgcaatggctgaaaaagaatttctgtatattgtttcactgata 1023

                                                                        
Query: 243  tctctttccattctgaagatgaagtgccctcagctcggtaatctcgaggagaatacagta 302
            ||||||||||||| || |||||||| || ||||| || |||||||| || ||||||| ||
Sbjct: 1022 tctctttccattcagaggatgaagttccttcagcacgataatctcgtggtgaatacaata 963

                                                                        
Query: 303  tttggactcgagaccttccaaaacctccaaaaagagttgatttctggatgataaatcggc 362
            |||| ||||  ||||  |||||||||||||| ||||||||||||||||  || |||||||
Sbjct: 962  tttgcactcttgaccgaccaaaacctccaaacagagttgatttctggactatgaatcggc 903

                                                                        
Query: 363  taacttttgatctcttcagttttttcaggagtggcatatcttcatgcttgcctttaaatt 422
             ||||||||||||||||||   ||||| |    | ||||| || ||| ||||||| ||||
Sbjct: 902  aaacttttgatctcttcagacatttcaaggcctgaatatcatcgtgcctgcctttgaatt 843

                                                              
Query: 423  ccatgaattcaccaaggacatttttgtcccctctgagttccaacctgtcc 472
            | |||||||||||||| | |||  |||||||| |||||||||||||||||
Sbjct: 842  caatgaattcaccaagaatattcctgtcccctttgagttccaacctgtcc 793
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>dbj|AK070910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065M03, full
            insert sequence
          Length = 1284

 Score =  218 bits (110), Expect = 1e-53
 Identities = 290/350 (82%)
 Strand = Plus / Minus

                                                                        
Query: 123  ataaaacttctacttactaggcgctcagtgtcacggaagcgacgctggacagcttgaact 182
            |||||| ||| ||| ||||||| ||||||||||| ||||| || || |||||||||||||
Sbjct: 1129 ataaaatttcaactcactaggcactcagtgtcacagaagcaacacttgacagcttgaact 1070

                                                                        
Query: 183  tccggactttcttggagtgcaacggctggaaaagaatctcggtgtactgcttcacggaga 242
            ||   ||||| || |||||||| ||||| |||||||| || || || || ||||| || |
Sbjct: 1069 tcttaacttttttcgagtgcaatggctgaaaaagaatttctgtatattgtttcactgata 1010

                                                                        
Query: 243  tctctttccattctgaagatgaagtgccctcagctcggtaatctcgaggagaatacagta 302
            ||||||||||||| || |||||||| || ||||| || |||||||| || ||||||| ||
Sbjct: 1009 tctctttccattcagaggatgaagttccttcagcacgataatctcgtggtgaatacaata 950

                                                                        
Query: 303  tttggactcgagaccttccaaaacctccaaaaagagttgatttctggatgataaatcggc 362
            |||| ||||  ||||  |||||||||||||| ||||||||||||||||  || |||||||
Sbjct: 949  tttgcactcttgaccgaccaaaacctccaaacagagttgatttctggactatgaatcggc 890

                                                                        
Query: 363  taacttttgatctcttcagttttttcaggagtggcatatcttcatgcttgcctttaaatt 422
             ||||||||||||||||||   ||||| |    | ||||| || ||| ||||||| ||||
Sbjct: 889  aaacttttgatctcttcagacatttcaaggcctgaatatcatcgtgcctgcctttgaatt 830

                                                              
Query: 423  ccatgaattcaccaaggacatttttgtcccctctgagttccaacctgtcc 472
            | |||||||||||||| | |||  |||||||| |||||||||||||||||
Sbjct: 829  caatgaattcaccaagaatattcctgtcccctttgagttccaacctgtcc 780
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>dbj|AK059043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-D06, full
            insert sequence
          Length = 1364

 Score =  218 bits (110), Expect = 1e-53
 Identities = 290/350 (82%)
 Strand = Plus / Minus

                                                                        
Query: 123  ataaaacttctacttactaggcgctcagtgtcacggaagcgacgctggacagcttgaact 182
            |||||| ||| ||| ||||||| ||||||||||| ||||| || || |||||||||||||
Sbjct: 1206 ataaaatttcaactcactaggcactcagtgtcacagaagcaacacttgacagcttgaact 1147

                                                                        
Query: 183  tccggactttcttggagtgcaacggctggaaaagaatctcggtgtactgcttcacggaga 242
            ||   ||||| || |||||||| ||||| |||||||| || || || || ||||| || |
Sbjct: 1146 tcttaacttttttcgagtgcaatggctgaaaaagaatttctgtatattgtttcactgata 1087

                                                                        
Query: 243  tctctttccattctgaagatgaagtgccctcagctcggtaatctcgaggagaatacagta 302
            ||||||||||||| || |||||||| || ||||| || |||||||| || ||||||| ||
Sbjct: 1086 tctctttccattcagaggatgaagttccttcagcacgataatctcgtggtgaatacaata 1027

                                                                        
Query: 303  tttggactcgagaccttccaaaacctccaaaaagagttgatttctggatgataaatcggc 362
            |||| ||||  ||||  |||||||||||||| ||||||||||||||||  || |||||||
Sbjct: 1026 tttgcactcttgaccgaccaaaacctccaaacagagttgatttctggactatgaatcggc 967

                                                                        
Query: 363  taacttttgatctcttcagttttttcaggagtggcatatcttcatgcttgcctttaaatt 422
             ||||||||||||||||||   ||||| |    | ||||| || ||| ||||||| ||||
Sbjct: 966  aaacttttgatctcttcagacatttcaaggcctgaatatcatcgtgcctgcctttgaatt 907

                                                              
Query: 423  ccatgaattcaccaaggacatttttgtcccctctgagttccaacctgtcc 472
            | |||||||||||||| | |||  |||||||| |||||||||||||||||
Sbjct: 906  caatgaattcaccaagaatattcctgtcccctttgagttccaacctgtcc 857
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>gb|AY106906.1| Zea mays PCO076960 mRNA sequence
          Length = 1157

 Score =  216 bits (109), Expect = 5e-53
 Identities = 286/344 (83%), Gaps = 1/344 (0%)
 Strand = Plus / Minus

                                                                        
Query: 129  cttctacttactaggcgctcagtgtcacggaagcgacgctggacagcttgaacttccgga 188
            ||||| ||| |||||| |||||||| || ||| | ||  |||||||||||||||||||  
Sbjct: 1092 cttctgcttgctaggcactcagtgtgacagaaacaacattggacagcttgaacttccgag 1033

                                                                        
Query: 189  ctttcttggagtgcaacggctggaaaagaatctcggtgtactgcttcacggagatctctt 248
            | || |||||  |||  |  |||||||  ||||| ||||| |||||||| || |||||||
Sbjct: 1032 cctttttggaacgcag-gnttggaaaacgatctccgtgtattgcttcacagaaatctctt 974

                                                                        
Query: 249  tccattctgaagatgaagtgccctcagctcggtaatctcgaggagaatacagtatttgga 308
            || | |||||||||||||| ||||||||||| || || ||||||||||||| |||||| |
Sbjct: 973  tcaactctgaagatgaagtcccctcagctcgatagtcacgaggagaatacaatatttgaa 914

                                                                        
Query: 309  ctcgagaccttccaaaacctccaaaaagagttgatttctggatgataaatcggctaactt 368
            |||| ||||| |||||||| |||||||||||||| ||||||||||| || || || ||||
Sbjct: 913  ctcgtgacctaccaaaaccaccaaaaagagttgacttctggatgatgaagcgactgactt 854

                                                                        
Query: 369  ttgatctcttcagttttttcaggagtggcatatcttcatgcttgcctttaaattccatga 428
            |||| ||||| ||  |||| || ||| | |  || |||||| ||||||| ||||| ||||
Sbjct: 853  ttgacctcttgagaattttgagaagttgaacgtcctcatgcctgcctttgaattcaatga 794

                                                        
Query: 429  attcaccaaggacatttttgtcccctctgagttccaacctgtcc 472
            |||||||||| ||||||||||| ||| |||||||||||||||||
Sbjct: 793  attcaccaagaacatttttgtctcctttgagttccaacctgtcc 750
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>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete
              sequence
          Length = 143961

 Score =  121 bits (61), Expect = 2e-24
 Identities = 157/189 (83%)
 Strand = Plus / Plus

                                                                          
Query: 123    ataaaacttctacttactaggcgctcagtgtcacggaagcgacgctggacagcttgaact 182
              |||||| ||| ||| ||||||| ||||||||||| ||||| || || |||||||||||||
Sbjct: 119081 ataaaatttcaactcactaggcactcagtgtcacagaagcaacacttgacagcttgaact 119140

                                                                          
Query: 183    tccggactttcttggagtgcaacggctggaaaagaatctcggtgtactgcttcacggaga 242
              ||   ||||| || |||||||| ||||| |||||||| || || || || ||||| || |
Sbjct: 119141 tcttaacttttttcgagtgcaatggctgaaaaagaatttctgtatattgtttcactgata 119200

                                                                          
Query: 243    tctctttccattctgaagatgaagtgccctcagctcggtaatctcgaggagaatacagta 302
              ||||||||||||| || |||||||| || ||||| || |||||||| || ||||||| ||
Sbjct: 119201 tctctttccattcagaggatgaagttccttcagcacgataatctcgtggtgaatacaata 119260

                       
Query: 303    tttggactc 311
              |||| ||||
Sbjct: 119261 tttgcactc 119269



 Score =  105 bits (53), Expect = 1e-19
 Identities = 125/149 (83%)
 Strand = Plus / Plus

                                                                          
Query: 320    ccaaaacctccaaaaagagttgatttctggatgataaatcggctaacttttgatctcttc 379
              |||||||||||||| ||||||||||||||||  || ||||||| ||||||||||||||||
Sbjct: 119650 ccaaaacctccaaacagagttgatttctggactatgaatcggcaaacttttgatctcttc 119709

                                                                          
Query: 380    agttttttcaggagtggcatatcttcatgcttgcctttaaattccatgaattcaccaagg 439
              ||   ||||| |    | ||||| || ||| ||||||| ||||| |||||||||||||| 
Sbjct: 119710 agacatttcaaggcctgaatatcatcgtgcctgcctttgaattcaatgaattcaccaaga 119769

                                           
Query: 440    acatttttgtcccctctgagttccaacct 468
              | |||  |||||||| |||||||||||||
Sbjct: 119770 atattcctgtcccctttgagttccaacct 119798
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  121 bits (61), Expect = 2e-24
 Identities = 157/189 (83%)
 Strand = Plus / Plus

                                                                            
Query: 123      ataaaacttctacttactaggcgctcagtgtcacggaagcgacgctggacagcttgaact 182
                |||||| ||| ||| ||||||| ||||||||||| ||||| || || |||||||||||||
Sbjct: 22466658 ataaaatttcaactcactaggcactcagtgtcacagaagcaacacttgacagcttgaact 22466717

                                                                            
Query: 183      tccggactttcttggagtgcaacggctggaaaagaatctcggtgtactgcttcacggaga 242
                ||   ||||| || |||||||| ||||| |||||||| || || || || ||||| || |
Sbjct: 22466718 tcttaacttttttcgagtgcaatggctgaaaaagaatttctgtatattgtttcactgata 22466777

                                                                            
Query: 243      tctctttccattctgaagatgaagtgccctcagctcggtaatctcgaggagaatacagta 302
                ||||||||||||| || |||||||| || ||||| || |||||||| || ||||||| ||
Sbjct: 22466778 tctctttccattcagaggatgaagttccttcagcacgataatctcgtggtgaatacaata 22466837

                         
Query: 303      tttggactc 311
                |||| ||||
Sbjct: 22466838 tttgcactc 22466846



 Score =  105 bits (53), Expect = 1e-19
 Identities = 125/149 (83%)
 Strand = Plus / Plus

                                                                            
Query: 320      ccaaaacctccaaaaagagttgatttctggatgataaatcggctaacttttgatctcttc 379
                |||||||||||||| ||||||||||||||||  || ||||||| ||||||||||||||||
Sbjct: 22467227 ccaaaacctccaaacagagttgatttctggactatgaatcggcaaacttttgatctcttc 22467286

                                                                            
Query: 380      agttttttcaggagtggcatatcttcatgcttgcctttaaattccatgaattcaccaagg 439
                ||   ||||| |    | ||||| || ||| ||||||| ||||| |||||||||||||| 
Sbjct: 22467287 agacatttcaaggcctgaatatcatcgtgcctgcctttgaattcaatgaattcaccaaga 22467346

                                             
Query: 440      acatttttgtcccctctgagttccaacct 468
                | |||  |||||||| |||||||||||||
Sbjct: 22467347 atattcctgtcccctttgagttccaacct 22467375
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  121 bits (61), Expect = 2e-24
 Identities = 157/189 (83%)
 Strand = Plus / Plus

                                                                            
Query: 123      ataaaacttctacttactaggcgctcagtgtcacggaagcgacgctggacagcttgaact 182
                |||||| ||| ||| ||||||| ||||||||||| ||||| || || |||||||||||||
Sbjct: 22479126 ataaaatttcaactcactaggcactcagtgtcacagaagcaacacttgacagcttgaact 22479185

                                                                            
Query: 183      tccggactttcttggagtgcaacggctggaaaagaatctcggtgtactgcttcacggaga 242
                ||   ||||| || |||||||| ||||| |||||||| || || || || ||||| || |
Sbjct: 22479186 tcttaacttttttcgagtgcaatggctgaaaaagaatttctgtatattgtttcactgata 22479245

                                                                            
Query: 243      tctctttccattctgaagatgaagtgccctcagctcggtaatctcgaggagaatacagta 302
                ||||||||||||| || |||||||| || ||||| || |||||||| || ||||||| ||
Sbjct: 22479246 tctctttccattcagaggatgaagttccttcagcacgataatctcgtggtgaatacaata 22479305

                         
Query: 303      tttggactc 311
                |||| ||||
Sbjct: 22479306 tttgcactc 22479314



 Score =  105 bits (53), Expect = 1e-19
 Identities = 125/149 (83%)
 Strand = Plus / Plus

                                                                            
Query: 320      ccaaaacctccaaaaagagttgatttctggatgataaatcggctaacttttgatctcttc 379
                |||||||||||||| ||||||||||||||||  || ||||||| ||||||||||||||||
Sbjct: 22479695 ccaaaacctccaaacagagttgatttctggactatgaatcggcaaacttttgatctcttc 22479754

                                                                            
Query: 380      agttttttcaggagtggcatatcttcatgcttgcctttaaattccatgaattcaccaagg 439
                ||   ||||| |    | ||||| || ||| ||||||| ||||| |||||||||||||| 
Sbjct: 22479755 agacatttcaaggcctgaatatcatcgtgcctgcctttgaattcaatgaattcaccaaga 22479814

                                             
Query: 440      acatttttgtcccctctgagttccaacct 468
                | |||  |||||||| |||||||||||||
Sbjct: 22479815 atattcctgtcccctttgagttccaacct 22479843
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>ref|NM_001040357.1| Danio rerio zgc:136909 (zgc:136909), mRNA
          Length = 1993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 35  aggcatggatgtacagaggca 55
           |||||||||||||||||||||
Sbjct: 283 aggcatggatgtacagaggca 263
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>gb|AC099341.4| Homo sapiens BAC clone RP11-317C13 from 7, complete sequence
          Length = 51939

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 441  catttttgtcccctctgagtt 461
            |||||||||||||||||||||
Sbjct: 9807 catttttgtcccctctgagtt 9787
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>gb|BC115324.1| Danio rerio cDNA clone MGC:136909 IMAGE:7993962, complete cds
          Length = 1993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 35  aggcatggatgtacagaggca 55
           |||||||||||||||||||||
Sbjct: 283 aggcatggatgtacagaggca 263
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>emb|BX322655.10| Zebrafish DNA sequence from clone DKEYP-53E12 in linkage group 8,
              complete sequence
          Length = 184723

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 35     aggcatggatgtacagaggca 55
              |||||||||||||||||||||
Sbjct: 154316 aggcatggatgtacagaggca 154296
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>ref|XM_695051.1| PREDICTED: Danio rerio similar to Protein C20orf54 (LOC571460),
           mRNA
          Length = 1394

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 35  aggcatggatgtacagaggca 55
           |||||||||||||||||||||
Sbjct: 276 aggcatggatgtacagaggca 256
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 329     ccaaaaagagttgatttctgg 349
               |||||||||||||||||||||
Sbjct: 9853706 ccaaaaagagttgatttctgg 9853726
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>gb|AC079584.4| Homo sapiens BAC clone CTD-2252P21 from 2, complete sequence
          Length = 77458

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 400   atcttcatgcttgcctttaaa 420
             |||||||||||||||||||||
Sbjct: 18182 atcttcatgcttgcctttaaa 18202
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>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 329    ccaaaaagagttgatttctgg 349
              |||||||||||||||||||||
Sbjct: 143948 ccaaaaagagttgatttctgg 143968
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>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 329   ccaaaaagagttgatttctgg 349
             |||||||||||||||||||||
Sbjct: 50341 ccaaaaagagttgatttctgg 50361
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>dbj|AK121044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053F03, full
            insert sequence
          Length = 5245

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 329  ccaaaaagagttgatttctgg 349
            |||||||||||||||||||||
Sbjct: 3977 ccaaaaagagttgatttctgg 3957
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>gb|AC008372.6|AC008372 Homo sapiens chromosome 14 clones RP11-111O16 and RP11-61F4 containing
              genes for nuclear receptor coactivator NCoA-62 (nuclear
              receptor coactivator NCoA-62) gene, complete cds; and
              unknown gene, complete sequence
          Length = 268238

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 50     gaggcaagagaaacacatctc 70
              |||||||||||||||||||||
Sbjct: 129034 gaggcaagagaaacacatctc 129014
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>gb|AC102778.8| Mus musculus chromosome 3, clone RP23-19M24, complete sequence
          Length = 179555

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ttctgaagatgaagtgccct 272
             ||||||||||||||||||||
Sbjct: 62933 ttctgaagatgaagtgccct 62914
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>gb|AC110381.5| Mus musculus BAC clone RP24-198I16 from chromosome 10, complete sequence
          Length = 166554

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    ttttttcaggagtggcatat 401
              ||||||||||||||||||||
Sbjct: 121799 ttttttcaggagtggcatat 121780
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>gb|AC114919.5| Mus musculus BAC clone RP23-102A8 from 18, complete sequence
          Length = 185198

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  tagattctgcccataaaact 130
            ||||||||||||||||||||
Sbjct: 5649 tagattctgcccataaaact 5668
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>emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete DNA sequence
          Length = 316613

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   ctggacagcttgaacttccg 186
             ||||||||||||||||||||
Sbjct: 31067 ctggacagcttgaacttccg 31086
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>gb|AC027020.12| Homo sapiens chromosome 15, clone RP11-526I2, complete sequence
          Length = 170563

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    tacagaggcaagagaaacacatct 69
             ||||||| ||||||||||||||||
Sbjct: 62506 tacagagccaagagaaacacatct 62529
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>gb|AC098822.3| Homo sapiens BAC clone RP11-338B23 from 4, complete sequence
          Length = 181792

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 415    tttaaattccatgaattcac 434
              ||||||||||||||||||||
Sbjct: 106782 tttaaattccatgaattcac 106801
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>emb|CR628381.9| Zebrafish DNA sequence from clone DKEY-27I16 in linkage group 14,
             complete sequence
          Length = 57662

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   ttgatttctggatgataaat 358
             ||||||||||||||||||||
Sbjct: 28149 ttgatttctggatgataaat 28168
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>gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome 15, complete sequence
          Length = 228138

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 411   tgcctttaaattccatgaattcac 434
             |||||||||||||||| |||||||
Sbjct: 91010 tgcctttaaattccatcaattcac 91033


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,405,293
Number of Sequences: 3902068
Number of extensions: 4405293
Number of successful extensions: 81680
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81554
Number of HSP's gapped (non-prelim): 125
length of query: 472
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 450
effective length of database: 17,147,199,772
effective search space: 7716239897400
effective search space used: 7716239897400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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