ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd19n22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 515 bits (260), Expect = e-143 Identities = 285/296 (96%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134496 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 134437 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134436 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 134377 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134376 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 134317 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134316 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 134257 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134256 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 134201 Score = 515 bits (260), Expect = e-143 Identities = 285/296 (96%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 80398 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 80457 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80458 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 80517 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 80518 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 80577 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80578 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 80637 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 80638 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 80693 Score = 464 bits (234), Expect = e-127 Identities = 234/234 (100%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134100 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 134041 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134040 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 133981 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133980 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 133921 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133920 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 133867 Score = 464 bits (234), Expect = e-127 Identities = 234/234 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80794 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 80853 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80854 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 80913 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80914 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 80973 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80974 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 81027 Score = 139 bits (70), Expect = 1e-29 Identities = 70/70 (100%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134187 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 134128 Query: 370 taatgatcaa 379 |||||||||| Sbjct: 134127 taatgatcaa 134118 Score = 139 bits (70), Expect = 1e-29 Identities = 70/70 (100%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80707 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 80766 Query: 370 taatgatcaa 379 |||||||||| Sbjct: 80767 taatgatcaa 80776
>emb|X13327.1|CHSCPSBA Secale cereale chloroplast psbA gene for herbicide-binding protein D1 Length = 2729 Score = 505 bits (255), Expect = e-140 Identities = 264/267 (98%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2442 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 2501 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2502 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 2561 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2562 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 2621 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2622 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 2681 Query: 241 ataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||||||||||| Sbjct: 2682 ataaatgatgagctacaaaaggattcg 2708
>gb|DQ113919.1| Calamagrostis muiriana isolate B1 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 597 Score = 492 bits (248), Expect = e-136 Identities = 282/296 (95%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 148 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 207 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 267 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 268 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatactagatgccc 327 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 328 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 387 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 388 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 443 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 459 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcagaataaatagac 518 Query: 370 taatgat 376 ||||||| Sbjct: 519 taatgat 525 Score = 95.6 bits (48), Expect = 2e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 401 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 448 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 597
>gb|DQ369792.1| Festuca occidentalis isolate 17 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 627 Score = 492 bits (248), Expect = e-136 Identities = 282/296 (95%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 186 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 245 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 305 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 306 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 365 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 366 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 425 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 426 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 481 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 627 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataa 363 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 495 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataa 548
>gb|DQ369762.1| Festuca rubra isolate 4 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 633 Score = 492 bits (248), Expect = e-136 Identities = 282/296 (95%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 182 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 241 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 301 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 302 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 361 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 362 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 421 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 422 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 477 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 491 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 550 Query: 370 taatgat 376 ||||||| Sbjct: 551 taatgat 557 Score = 105 bits (53), Expect = 2e-19 Identities = 53/53 (100%) Strand = Plus / Plus Query: 400 tttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 tttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 633
>gb|DQ369760.1| Festuca rubra isolate 3 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 633 Score = 492 bits (248), Expect = e-136 Identities = 282/296 (95%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 182 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 241 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 301 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 302 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 361 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 362 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 421 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 422 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 477 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 491 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 550 Query: 370 taatgat 376 ||||||| Sbjct: 551 taatgat 557 Score = 105 bits (53), Expect = 2e-19 Identities = 53/53 (100%) Strand = Plus / Plus Query: 400 tttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 tttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 633
>gb|DQ369758.1| Festuca valesiaca isolate 2 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 492 bits (248), Expect = e-136 Identities = 282/296 (95%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369756.1| Festuca arizonica isolate 1 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 633 Score = 492 bits (248), Expect = e-136 Identities = 282/296 (95%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 182 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 241 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 301 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 302 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 361 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 362 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 421 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 422 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 477 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 491 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 550 Query: 370 taatgat 376 ||||||| Sbjct: 551 taatgat 557 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 633
>gb|DQ113925.1| Calamagrostis breweri isolate X17 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 148 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 207 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 267 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 268 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatactagatgccc 327 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 328 gagaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 387 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 388 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 443 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 460 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcagaataaatagac 519 Query: 370 taatgat 376 ||||||| Sbjct: 520 taatgat 526 Score = 95.6 bits (48), Expect = 2e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 401 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 448 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 598
>gb|DQ113924.1| Calamagrostis breweri isolate RMP0198 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 148 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 207 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 267 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 268 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatactagatgccc 327 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 328 gagaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 387 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 388 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 443 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 460 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcagaataaatagac 519 Query: 370 taatgat 376 ||||||| Sbjct: 520 taatgat 526 Score = 95.6 bits (48), Expect = 2e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 401 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 448 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 598
>gb|DQ113923.1| Calamagrostis breweri isolate BW8259 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 148 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 207 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 267 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 268 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatactagatgccc 327 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 328 gagaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 387 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 388 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 443 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 460 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcagaataaatagac 519 Query: 370 taatgat 376 ||||||| Sbjct: 520 taatgat 526 Score = 95.6 bits (48), Expect = 2e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 401 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 448 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 598
>gb|DQ113922.1| Calamagrostis breweri isolate RMP0007 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 148 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 207 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 267 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 268 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatactagatgccc 327 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 328 gagaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 387 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 388 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 443 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 460 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcagaataaatagac 519 Query: 370 taatgat 376 ||||||| Sbjct: 520 taatgat 526 Score = 95.6 bits (48), Expect = 2e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 401 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 448 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 598
>gb|DQ113921.1| Calamagrostis muiriana isolate B4 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 148 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 207 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 267 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 268 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatactagatgccc 327 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 328 gagaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 387 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 388 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 443 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 460 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcagaataaatagac 519 Query: 370 taatgat 376 ||||||| Sbjct: 520 taatgat 526 Score = 95.6 bits (48), Expect = 2e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 401 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 448 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 598
>gb|DQ113920.1| Calamagrostis muiriana isolate B3 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 148 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 207 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 267 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 268 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatactagatgccc 327 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 328 gagaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 387 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 388 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 443 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 460 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcagaataaatagac 519 Query: 370 taatgat 376 ||||||| Sbjct: 520 taatgat 526 Score = 95.6 bits (48), Expect = 2e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 401 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 448 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 598
>gb|DQ113918.1| Calamagrostis muiriana isolate A7 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 148 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 207 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 267 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 268 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatactagatgccc 327 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 328 gagaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 387 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 388 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 443 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 460 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcagaataaatagac 519 Query: 370 taatgat 376 ||||||| Sbjct: 520 taatgat 526 Score = 95.6 bits (48), Expect = 2e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 401 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 448 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 598
>gb|DQ113917.1| Calamagrostis muiriana isolate A1 trnH-psbA intergenic spacer, complete sequence; chloroplast Length = 598 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 148 gttaacgacgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 207 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 267 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 268 cctttccattatgaatcgcgattgtatggccaaccattgtgggtagaatactagatgccc 327 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 328 gagaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 387 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 388 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 443 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 460 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcagaataaatagac 519 Query: 370 taatgat 376 ||||||| Sbjct: 520 taatgat 526 Score = 95.6 bits (48), Expect = 2e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 401 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 448 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ttagctggataaggggcggatgtagccaagtggatcaaggcagtggat 598
>gb|AY016310.1| Phragmites australis trnH-psbA intergenic spacer, chloroplast sequence Length = 585 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 422 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 363 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 303 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 302 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 243 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 242 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 183 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 182 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 127 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 113 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 54 Query: 370 taatgat 376 ||||||| Sbjct: 53 taatgat 47 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcgga 420 |||||||||||||||||||||||| Sbjct: 27 tcctttagctggataaggggcgga 4
>gb|DQ369790.1| Festuca roemeri isolate 16 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369788.1| Festuca roemeri isolate 15 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369784.1| Festuca roemeri isolate 13 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369782.1| Festuca roemeri isolate 12 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369780.1| Festuca roemeri isolate 11 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369778.1| Festuca idahoensis isolate 10 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369776.1| Festuca valesiaca isolate 9 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacgacgagatttagtatcttttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369774.1| Festuca idahoensis isolate 8 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369772.1| Festuca roemeri isolate 7.2 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369770.1| Festuca idahoensis isolate 7.1 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369768.1| Festuca roemeri isolate 6.2 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369766.1| Festuca idahoensis isolate 6.1 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 484 bits (244), Expect = e-133 Identities = 281/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 134508 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 134449 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134448 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 134389 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 134388 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 134329 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134328 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 134269 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134268 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 134213 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 80648 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 80707 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80708 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 80767 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 80768 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 80827 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 80828 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 80887 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 80888 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 80943 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134112 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 134053 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134052 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 133993 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133992 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 133933 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133932 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 133879 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81044 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 81103 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 81104 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 81163 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 81164 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 81223 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81224 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 81277 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134198 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 134139 Query: 370 taatgat 376 ||||||| Sbjct: 134138 taatgat 134132 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 80958 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 81017 Query: 370 taatgat 376 ||||||| Sbjct: 81018 taatgat 81024
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 134508 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 134449 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134448 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 134389 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 134388 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 134329 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134328 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 134269 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134268 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 134213 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 80648 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 80707 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80708 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 80767 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 80768 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 80827 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 80828 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 80887 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 80888 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 80943 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134112 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 134053 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134052 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 133993 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133992 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 133933 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133932 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 133879 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81044 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 81103 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 81104 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 81163 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 81164 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 81223 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81224 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 81277 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134198 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 134139 Query: 370 taatgat 376 ||||||| Sbjct: 134138 taatgat 134132 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 80958 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 81017 Query: 370 taatgat 376 ||||||| Sbjct: 81018 taatgat 81024
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 134457 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 134398 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134397 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 134338 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 134337 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 134278 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134277 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 134218 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134217 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 134162 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 80593 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 80652 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80653 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 80712 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 80713 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 80772 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 80773 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 80832 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 80833 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 80888 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134061 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 134002 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134001 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 133942 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133941 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 133882 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133881 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 133828 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80989 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 81048 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 81049 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 81108 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 81109 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 81168 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81169 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 81222 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134147 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 134088 Query: 370 taatgat 376 ||||||| Sbjct: 134087 taatgat 134081 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 80903 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 80962 Query: 370 taatgat 376 ||||||| Sbjct: 80963 taatgat 80969
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 134482 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 134423 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134422 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 134363 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 134362 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 134303 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134302 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 134243 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134242 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 134187 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 80636 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 80695 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80696 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 80755 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 80756 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 80815 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 80816 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 80875 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 80876 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 80931 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134086 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 134027 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134026 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 133967 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133966 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 133907 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133906 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 133853 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81032 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 81091 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 81092 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 81151 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 81152 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 81211 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81212 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 81265 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134172 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 134113 Query: 370 taatgat 376 ||||||| Sbjct: 134112 taatgat 134106 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 80946 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 81005 Query: 370 taatgat 376 ||||||| Sbjct: 81006 taatgat 81012
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 70104 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 70045 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70044 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 69985 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 69984 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 69925 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 69924 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 69865 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 69864 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 69809 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 53257 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 53316 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53317 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 53376 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 53377 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 53436 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 53437 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 53496 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 53497 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 53552 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69708 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 69649 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 69648 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 69589 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 69588 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 69529 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69528 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 69475 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53653 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 53712 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 53713 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 53772 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 53773 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 53832 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53833 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 53886 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 69794 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 69735 Query: 370 taatgat 376 ||||||| Sbjct: 69734 taatgat 69728 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 53567 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 53626 Query: 370 taatgat 376 ||||||| Sbjct: 53627 taatgat 53633
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 78831 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 78890 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78891 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 78950 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 78951 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 79010 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79011 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 79070 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 79071 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 79126 Score = 432 bits (218), Expect = e-118 Identities = 230/234 (98%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 79227 tcctttagctggataagaggcggatgtagccaagtggatcaaggcagtggattgtgaatc 79286 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 79287 caccatgcgcgggttcaattcccgttgttcgcccatcccattattgcaaattccaaaaat 79346 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 79347 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 79406 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79407 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 79460 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 79141 aaagagtggcattcgatgtccaacatctcgatcgaagtatggaggtcagaataaatagaa 79200 Query: 370 taatgat 376 ||||||| Sbjct: 79201 taatgat 79207
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 73185 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 73126 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73125 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 73066 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 73065 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 73006 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 73005 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 72946 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 72945 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 72890 Score = 432 bits (218), Expect = e-118 Identities = 230/234 (98%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 72789 tcctttagctggataaggggcggatgtagccaactggatcaaggcagtggattgtgaatc 72730 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 72729 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 72670 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 72669 gcaattttccatattcctagttatgtatttacttacggcgacgaagaataaaactatcac 72610 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72609 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 72556 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 72875 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 72816 Query: 370 taatgat 376 ||||||| Sbjct: 72815 taatgat 72809
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 12895 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 12954 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12955 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 13014 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 13015 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 13074 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 13075 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 13134 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 13135 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 13190 Score = 432 bits (218), Expect = e-118 Identities = 230/234 (98%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 13291 tcctttagctggataagaggcggatgtagccaagtggatcaaggcagtggattgtgaatc 13350 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 13351 caccatgcgcgggttcaattcccgttgttcgcccatcccattattgcaaattccaaaaat 13410 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 13411 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 13470 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13471 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 13524 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 13205 aaagagtggcattcgatgtccaacatctcgatcgaagtatggaggtcagaataaatagaa 13264 Query: 370 taatgat 376 ||||||| Sbjct: 13265 taatgat 13271
>gb|DQ369786.1| Festuca roemeri isolate 14 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcttccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>gb|DQ369764.1| Festuca idahoensis isolate 5 PsbA (psbA) gene, partial cds; and psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 638 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 187 gttaacggcgagatttagtatcctttcttgcattttcataactcgtgaaatgccgagtag 246 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 247 gcacgaattcccccaatttgcgacccaccataggatttgttatgtaaataggtatatgtt 306 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cctttccgttatgaatcgcgattgtatggccaaccattgtgggtagaatgctagatgccc 366 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 367 gggaccacgttactattgtttctttctcctccttcatatttaccttttctatttttgcca 426 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 427 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 482 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 496 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaa 555 Query: 370 taatgat 376 ||||||| Sbjct: 556 taatgat 562 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtg 638
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 9213073 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 9213132 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9213133 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 9213192 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 9213193 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 9213252 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9213253 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 9213312 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9213313 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 9213368 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 9189031 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 9188972 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9188971 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 9188912 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 9188911 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 9188852 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9188851 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 9188792 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9188791 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 9188736 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 9112078 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 9112019 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9112018 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 9111959 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 9111958 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 9111899 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9111898 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 9111839 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9111838 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 9111783 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 9095231 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 9095290 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9095291 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 9095350 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 9095351 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 9095410 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9095411 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 9095470 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9095471 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 9095526 Score = 460 bits (232), Expect = e-126 Identities = 278/296 (93%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 23629475 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 23629534 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23629535 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 23629594 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | Sbjct: 23629595 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgctc 23629654 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 23629655 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 23629714 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23629715 ataaatgatgagctacaaaaggattcattttttttcgtgtcacagctgattactcc 23629770 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9213469 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 9213528 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9213529 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 9213588 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9213589 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 9213648 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9213649 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 9213702 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9188635 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 9188576 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9188575 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 9188516 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9188515 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 9188456 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9188455 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 9188402 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9111682 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 9111623 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9111622 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 9111563 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9111562 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 9111503 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9111502 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 9111449 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9095627 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 9095686 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9095687 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 9095746 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9095747 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 9095806 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9095807 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 9095860 Score = 416 bits (210), Expect = e-113 Identities = 229/234 (97%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23629871 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 23629930 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| | Sbjct: 23629931 caccatgcgcgggttcaattcccattgttcgcccatcccattattgcaaattccaaaa-t 23629989 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 23629990 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 23630049 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23630050 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 23630103 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 23629785 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 23629844 Query: 370 taatgat 376 ||||||| Sbjct: 23629845 taatgat 23629851 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9213383 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 9213442 Query: 370 taatgat 376 ||||||| Sbjct: 9213443 taatgat 9213449 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9188721 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 9188662 Query: 370 taatgat 376 ||||||| Sbjct: 9188661 taatgat 9188655 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9111768 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 9111709 Query: 370 taatgat 376 ||||||| Sbjct: 9111708 taatgat 9111702 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9095541 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 9095600 Query: 370 taatgat 376 ||||||| Sbjct: 9095601 taatgat 9095607 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 251442 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 251383 Query: 370 taatgat 376 ||||||| Sbjct: 251382 taatgat 251376 Score = 69.9 bits (35), Expect = 1e-08 Identities = 51/59 (86%) Strand = Plus / Minus Query: 238 ccaataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 251515 ccaataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 251457 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 577 tatattttttccttttcctagtt 599 ||||||||||||||||||||||| Sbjct: 30186804 tatattttttccttttcctagtt 30186826 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 39 taactcgtaaaatgccgagtaggcacgaattct 71 |||||||| ||||||||||| || ||||||||| Sbjct: 2074046 taactcgtgaaatgccgagttggtacgaattct 2074014
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 10372439 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 10372498 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10372499 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 10372558 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 10372559 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 10372618 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10372619 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 10372678 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10372679 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 10372734 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 10291860 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 10291801 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10291800 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 10291741 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 10291740 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 10291681 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10291680 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 10291621 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10291620 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 10291565 Score = 460 bits (232), Expect = e-126 Identities = 278/296 (93%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 20816635 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 20816694 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20816695 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 20816754 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 20816755 cctttccattatgaatcgcgattgtatggccaaccattgtggatagaatgctagatgccc 20816814 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 20816815 gggaccacgttactattgtttctttctcctccttcatattgacattttctatttttgcca 20816874 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 20816875 ataaatgatgagctacaaaaggattcgttttttttcttgtcacagctgattactcc 20816930 Score = 432 bits (218), Expect = e-118 Identities = 230/234 (98%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10372835 tcctttagctggataagaggcggatgtagccaagtggatcaaggcagtggattgtgaatc 10372894 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 10372895 caccatgcgcgggttcaattcccgttgttcgcccatcccattattgcaaattccaaaaat 10372954 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10372955 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 10373014 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10373015 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 10373068 Score = 432 bits (218), Expect = e-118 Identities = 230/234 (98%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10291464 tcctttagctggataaggggcggatgtagccaactggatcaaggcagtggattgtgaatc 10291405 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10291404 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 10291345 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 10291344 gcaattttccatattcctagttatgtatttacttacggcgacgaagaataaaactatcac 10291285 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10291284 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 10291231 Score = 410 bits (207), Expect = e-111 Identities = 222/227 (97%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20817031 tcctttagctggataaggggcagatgtagccaagtggatcaaggcagtggattgtgaatc 20817090 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 20817091 caccatgcgcgggttcaattcccgtcgttcgcccatcctattattgcaaattccaaagat 20817150 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 20817151 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 20817210 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccc 623 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20817211 tatattttttccttttcctagttcttcttccaagcgcaggataaccc 20817257 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 20816945 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 20817004 Query: 370 taatgat 376 ||||||| Sbjct: 20817005 taatgat 20817011 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 10291550 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 10291491 Query: 370 taatgat 376 ||||||| Sbjct: 10291490 taatgat 10291484 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 10372749 aaagagtggcattcgatgtccaacatctcgatcgaagtatggaggtcagaataaatagaa 10372808 Query: 370 taatgat 376 ||||||| Sbjct: 10372809 taatgat 10372815 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtg 432 |||||||||||||||||||||||||||||||||||| Sbjct: 1214739 tcctttagctggataaggggcggatgtagccaagtg 1214704 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 442 agtggattgtgaatccaccatgcgcgggttcaattcccgtcgttcgcccatcgcattatt 501 ||||||||||||||| ||||| | |||||||| |||||| ||||||||||| | ||||| Sbjct: 12817977 agtggattgtgaatcatccatgtgtgggttcaactcccgtagttcgcccatcactttatt 12818036 Query: 502 gcaaattccaaaaatgcaattttccatattccta 535 |||||||| |||| ||||||| |||| |||| Sbjct: 12818037 ttaaattccataaatataattttctatataccta 12818070
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 14453052 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 14452993 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14452992 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 14452933 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 14452932 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 14452873 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14452872 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 14452813 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 14452812 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 14452757 Score = 460 bits (232), Expect = e-126 Identities = 278/296 (93%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 11893263 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 11893204 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 11893203 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaattggtatatgtt 11893144 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 11893143 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 11893084 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 11893083 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 11893024 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 11893023 ataaatgatgagctacaaaaggattcattttttttcgtgtcacagctgattactcc 11892968 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14452656 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 14452597 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 14452596 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 14452537 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 14452536 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 14452477 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14452476 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 14452423 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11892866 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 11892807 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 11892806 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 11892747 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 11892746 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 11892687 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11892686 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 11892633 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 14452742 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 14452683 Query: 370 taatgat 376 ||||||| Sbjct: 14452682 taatgat 14452676 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 11892952 aaagagtggcattcgatgtccaatatcttgatcgaagtatggaggtcagaataaatagaa 11892893 Query: 370 taatgat 376 ||||||| Sbjct: 11892892 taatgat 11892886 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 226 tttctatctttgccaataaatgatgagctacaaaag 261 ||||||| |||||||||||||||||||||||||||| Sbjct: 393435 tttctatttttgccaataaatgatgagctacaaaag 393400 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 329 ccaatatctcgatcgaagtacggaggtcagaataaatagaataat 373 ||||||||| || ||||| | |||||||| ||||||||||||||| Sbjct: 393348 ccaatatcttgaccgaagcatggaggtcaaaataaatagaataat 393304 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 577 tatattttttccttttcctagtt 599 ||||||||||||||||||||||| Sbjct: 14724969 tatattttttccttttcctagtt 14724947 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 186 cacgttactattgtttctttct 207 |||||||||||||||||||||| Sbjct: 393452 cacgttactattgtttctttct 393431
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 22318533 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 22318592 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22318593 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 22318652 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 22318653 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 22318712 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 22318713 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 22318772 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 22318773 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 22318828 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 9256423 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 9256364 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9256363 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 9256304 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 9256303 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 9256244 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9256243 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 9256184 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9256183 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 9256128 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22318929 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 22318988 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 22318989 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 22319048 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 22319049 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 22319108 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22319109 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 22319162 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9256027 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 9255968 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9255967 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 9255908 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9255907 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 9255848 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9255847 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 9255794 Score = 123 bits (62), Expect = 8e-25 Identities = 91/101 (90%), Gaps = 6/101 (5%) Strand = Plus / Minus Query: 64 cgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtat------at 117 ||||||| ||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 21499813 cgaattcccccaatttgcgacctgccataggatttgttatgtaaataggtatacgttaat 21499754 Query: 118 gttcctttccattatgaatcgcaattgtatggccaaccatt 158 |||||||| |||||||||||| ||||||||||||||||||| Sbjct: 21499753 gttccttttcattatgaatcgtaattgtatggccaaccatt 21499713 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22318843 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 22318902 Query: 370 taatgat 376 ||||||| Sbjct: 22318903 taatgat 22318909 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 9256113 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 9256054 Query: 370 taatgat 376 ||||||| Sbjct: 9256053 taatgat 9256047
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 14191124 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 14191065 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14191064 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 14191005 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 14191004 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 14190945 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14190944 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 14190885 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 14190884 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 14190829 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14190728 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 14190669 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 14190668 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 14190609 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 14190608 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 14190549 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14190548 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 14190495 Score = 270 bits (136), Expect = 5e-69 Identities = 163/172 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| | Sbjct: 27926120 gttaacgacgagatttagtatcctttcttacactttcataactcgtgaaatgccgagttg 27926179 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27926180 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 27926239 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgct 172 |||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 27926240 actttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgct 27926291 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 14190814 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 14190755 Query: 370 taatgat 376 ||||||| Sbjct: 14190754 taatgat 14190748
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 67636 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 67577 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67576 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 67517 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 67516 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 67457 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 67456 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 67397 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 67396 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 67341 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67240 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 67181 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67180 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 67121 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 67120 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 67061 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67060 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 67007 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 67326 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 67267 Query: 370 taatgat 376 ||||||| Sbjct: 67266 taatgat 67260
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 144855 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 144796 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144795 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 144736 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 144735 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 144676 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 144675 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 144616 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 144615 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 144560 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144459 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 144400 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 144399 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 144340 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 144339 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 144280 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144279 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 144226 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 144545 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 144486 Query: 370 taatgat 376 ||||||| Sbjct: 144485 taatgat 144479
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 52617 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 52558 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52557 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 52498 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 52497 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 52438 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 52437 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 52378 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 52377 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 52322 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52221 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 52162 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 52161 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 52102 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 52101 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 52042 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52041 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 51988 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 52307 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 52248 Query: 370 taatgat 376 ||||||| Sbjct: 52247 taatgat 52241
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 76005 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 75946 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75945 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 75886 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 75885 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 75826 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75825 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 75766 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 75765 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 75710 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75609 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 75550 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 75549 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 75490 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 75489 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 75430 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75429 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 75376 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 75695 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 75636 Query: 370 taatgat 376 ||||||| Sbjct: 75635 taatgat 75629
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 15516 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 15575 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15576 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 15635 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 15636 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 15695 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 15696 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 15755 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 15756 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 15811 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15912 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 15971 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 15972 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 16031 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 16032 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 16091 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16092 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 16145 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 15826 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 15885 Query: 370 taatgat 376 ||||||| Sbjct: 15886 taatgat 15892
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048G02 Length = 155542 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 134909 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 134968 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134969 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 135028 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 135029 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 135088 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135089 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 135148 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135149 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 135204 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135305 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 135364 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135365 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 135424 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135425 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 135484 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135485 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 135538 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135219 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 135278 Query: 370 taatgat 376 ||||||| Sbjct: 135279 taatgat 135285
>dbj|AK059477.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F01, full insert sequence Length = 1123 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 1096 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 1037 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1036 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 977 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 976 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 917 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 916 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 857 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 856 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 801 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 641 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 640 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 581 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 580 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 521 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 467 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 786 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 727 Query: 370 taatgat 376 ||||||| Sbjct: 726 taatgat 720
>gb|AY941127.1| Paspalum quadrifarium psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 381 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 322 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 262 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 202 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 201 gggaccacgttactattatttctttctcctccttcatattgaccttttctatttttgcca 142 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 141 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 86 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 73 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 14 Query: 370 taatgat 376 ||||||| Sbjct: 13 taatgat 7
>gb|AY941120.1| Paspalum haumanii psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 381 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 322 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 262 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 202 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 201 gggaccacgttactattatttctttctcctccttcatattgaccttttctatttttgcca 142 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 141 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 86 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 73 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 14 Query: 370 taatgat 376 ||||||| Sbjct: 13 taatgat 7
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 10378478 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 10378537 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10378538 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 10378597 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 10378598 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 10378657 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10378658 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 10378717 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10378718 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 10378773 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 10297899 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 10297840 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10297839 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 10297780 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 10297779 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 10297720 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10297719 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 10297660 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10297659 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 10297604 Score = 460 bits (232), Expect = e-126 Identities = 278/296 (93%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 20827899 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 20827958 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20827959 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 20828018 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 20828019 cctttccattatgaatcgcgattgtatggccaaccattgtggatagaatgctagatgccc 20828078 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 20828079 gggaccacgttactattgtttctttctcctccttcatattgacattttctatttttgcca 20828138 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 20828139 ataaatgatgagctacaaaaggattcgttttttttcttgtcacagctgattactcc 20828194 Score = 432 bits (218), Expect = e-118 Identities = 230/234 (98%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10378874 tcctttagctggataagaggcggatgtagccaagtggatcaaggcagtggattgtgaatc 10378933 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 10378934 caccatgcgcgggttcaattcccgttgttcgcccatcccattattgcaaattccaaaaat 10378993 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10378994 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 10379053 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10379054 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 10379107 Score = 432 bits (218), Expect = e-118 Identities = 230/234 (98%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10297503 tcctttagctggataaggggcggatgtagccaactggatcaaggcagtggattgtgaatc 10297444 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10297443 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 10297384 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 10297383 gcaattttccatattcctagttatgtatttacttacggcgacgaagaataaaactatcac 10297324 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10297323 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 10297270 Score = 410 bits (207), Expect = e-111 Identities = 222/227 (97%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20828295 tcctttagctggataaggggcagatgtagccaagtggatcaaggcagtggattgtgaatc 20828354 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 20828355 caccatgcgcgggttcaattcccgtcgttcgcccatcctattattgcaaattccaaagat 20828414 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 20828415 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 20828474 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccc 623 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20828475 tatattttttccttttcctagttcttcttccaagcgcaggataaccc 20828521 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 20828209 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 20828268 Query: 370 taatgat 376 ||||||| Sbjct: 20828269 taatgat 20828275 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 10297589 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 10297530 Query: 370 taatgat 376 ||||||| Sbjct: 10297529 taatgat 10297523 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 10378788 aaagagtggcattcgatgtccaacatctcgatcgaagtatggaggtcagaataaatagaa 10378847 Query: 370 taatgat 376 ||||||| Sbjct: 10378848 taatgat 10378854 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtg 432 |||||||||||||||||||||||||||||||||||| Sbjct: 1214736 tcctttagctggataaggggcggatgtagccaagtg 1214701 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 442 agtggattgtgaatccaccatgcgcgggttcaattcccgtcgttcgcccatcgcattatt 501 ||||||||||||||| ||||| | |||||||| |||||| ||||||||||| | ||||| Sbjct: 12825318 agtggattgtgaatcatccatgtgtgggttcaactcccgtagttcgcccatcactttatt 12825377 Query: 502 gcaaattccaaaaatgcaattttccatattccta 535 |||||||| |||| ||||||| |||| |||| Sbjct: 12825378 ttaaattccataaatataattttctatataccta 12825411
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 134450 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 134391 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134390 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 134331 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 134330 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 134271 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 134270 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 134211 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134210 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 134155 Score = 476 bits (240), Expect = e-131 Identities = 280/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 80589 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 80648 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80649 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 80708 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 80709 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 80768 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 80769 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 80828 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 80829 ataaatgatgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 80884 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134054 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 133995 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133994 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 133935 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133934 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 133875 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133874 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 133821 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80985 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 81044 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 81045 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 81104 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 81105 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 81164 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81165 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 81218 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134140 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 134081 Query: 370 taatgat 376 ||||||| Sbjct: 134080 taatgat 134074 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 80899 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 80958 Query: 370 taatgat 376 ||||||| Sbjct: 80959 taatgat 80965
>gb|AY941126.1| Paspalum exaltatum psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 468 bits (236), Expect = e-128 Identities = 279/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 381 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 322 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 262 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 202 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 201 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 142 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 141 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 86 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 73 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 14 Query: 370 taatgat 376 ||||||| Sbjct: 13 taatgat 7
>gb|AY941123.1| Paspalum quadrifarium psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 468 bits (236), Expect = e-128 Identities = 279/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 381 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 322 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 262 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 202 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 201 gggaccacgttactattatttctttctcctccttcatatttaccttttctatttttgcca 142 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 141 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 86 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 73 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 14 Query: 370 taatgat 376 ||||||| Sbjct: 13 taatgat 7
>gb|AY941121.1| Paspalum intermedium psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 468 bits (236), Expect = e-128 Identities = 279/296 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 381 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 322 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 262 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 202 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 201 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 142 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 141 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 86 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 73 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 14 Query: 370 taatgat 376 ||||||| Sbjct: 13 taatgat 7
>gb|DQ006214.1| Chasmanthium latifolium voucher Wells 4431 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 612 Score = 468 bits (236), Expect = e-128 Identities = 279/296 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 173 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 232 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 293 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 352 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 353 gggaccacgttactattgtttctttctcctccttcatattgaccttttcgatttttgcca 412 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| |||||||||||||||| |||| Sbjct: 413 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattcctcc 468 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| || ||||||||||||||||| Sbjct: 482 aaagagtggcatcctatgtccactatctcgatcgaggtatgggggtcagaataaatagaa 541 Query: 370 taatgat 376 ||||||| Sbjct: 542 taatgat 548 Score = 89.7 bits (45), Expect = 1e-14 Identities = 45/45 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggc 441 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 tcctttagctggataaggggcggatgtagccaagtggatcaaggc 612
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 466 bits (235), Expect = e-128 Identities = 259/267 (97%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 268 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 209 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 149 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 148 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 89 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 88 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 29 Query: 241 ataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||||||||||| Sbjct: 28 ataaatgatgagctacaaaaggattcg 2
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 466 bits (235), Expect = e-128 Identities = 259/267 (97%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 268 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 209 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 149 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 148 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 89 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 88 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 29 Query: 241 ataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||||||||||| Sbjct: 28 ataaatgatgagctacaaaaggattcg 2
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 466 bits (235), Expect = e-128 Identities = 259/267 (97%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 268 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 209 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 149 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 148 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 89 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 88 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 29 Query: 241 ataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||||||||||| Sbjct: 28 ataaatgatgagctacaaaaggattcg 2
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 460 bits (232), Expect = e-126 Identities = 278/296 (93%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 72156 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 72215 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72216 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 72275 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | Sbjct: 72276 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgctc 72335 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 72336 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 72395 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 72396 ataaatgatgagctacaaaaggattcattttttttcgtgtcacagctgattactcc 72451 Score = 416 bits (210), Expect = e-113 Identities = 229/234 (97%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72552 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 72611 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| | Sbjct: 72612 caccatgcgcgggttcaattcccattgttcgcccatcccattattgcaaattccaaaa-t 72670 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 72671 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 72730 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72731 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 72784 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 72466 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 72525 Query: 370 taatgat 376 ||||||| Sbjct: 72526 taatgat 72532
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 460 bits (232), Expect = e-126 Identities = 278/296 (93%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 79034 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 79093 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79094 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 79153 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 79154 cctttccattatgaatcgcgattgtatggccaaccattgtggatagaatgctagatgccc 79213 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 79214 gggaccacgttactattgtttctttctcctccttcatattgacattttctatttttgcca 79273 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 79274 ataaatgatgagctacaaaaggattcgttttttttcttgtcacagctgattactcc 79329 Score = 410 bits (207), Expect = e-111 Identities = 222/227 (97%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 79430 tcctttagctggataaggggcagatgtagccaagtggatcaaggcagtggattgtgaatc 79489 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 79490 caccatgcgcgggttcaattcccgtcgttcgcccatcctattattgcaaattccaaagat 79549 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 79550 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 79609 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccc 623 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79610 tatattttttccttttcctagttcttcttccaagcgcaggataaccc 79656 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 79344 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 79403 Query: 370 taatgat 376 ||||||| Sbjct: 79404 taatgat 79410
>gb|AY769122.1| Thrasya petrosa psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 479 Score = 460 bits (232), Expect = e-126 Identities = 278/296 (93%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 382 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 323 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 263 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 262 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 203 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||| ||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 202 gggaccatgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 143 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 142 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 87 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 74 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 15 Query: 370 taatgat 376 ||||||| Sbjct: 14 taatgat 8
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 460 bits (232), Expect = e-126 Identities = 278/296 (93%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 74753 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 74694 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 74693 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaattggtatatgtt 74634 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 74633 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 74574 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 74573 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 74514 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 74513 ataaatgatgagctacaaaaggattcattttttttcgtgtcacagctgattactcc 74458 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74356 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 74297 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 74296 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 74237 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 74236 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 74177 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74176 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 74123 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 74442 aaagagtggcattcgatgtccaatatcttgatcgaagtatggaggtcagaataaatagaa 74383 Query: 370 taatgat 376 ||||||| Sbjct: 74382 taatgat 74376
>gb|AY941125.1| Paspalum quarinii psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 460 bits (232), Expect = e-126 Identities = 278/296 (93%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 381 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 322 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 262 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 202 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| |||||||||||||||||||||| |||||||| || ||||||| Sbjct: 201 gggaccacgttactattatttctttctcctccttcatatttaccttttcgatttttgcca 142 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 141 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 86 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 73 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 14 Query: 370 taatgat 376 ||||||| Sbjct: 13 taatgat 7
>gb|AY941122.1| Paspalum rufum psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 460 bits (232), Expect = e-126 Identities = 278/296 (93%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 381 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 322 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 321 gcacgaattcccccaatttgcgacctaccataggatttgttatgtagataggtatatgtt 262 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 202 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 201 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 142 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 141 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 86 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 73 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 14 Query: 370 taatgat 376 ||||||| Sbjct: 13 taatgat 7
>gb|DQ006178.1| Cyperus erythrorhizos voucher Wells 4458 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 612 Score = 460 bits (232), Expect = e-126 Identities = 278/296 (93%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 174 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 233 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 234 gcacgaattcccccaatttgcgacctaccataggatttgttatataaataggtatatgtt 293 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 294 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 353 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 354 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 413 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 414 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 469 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 482 aaagagtggcatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 541 Query: 370 taatgat 376 ||||||| Sbjct: 542 taatgat 548 Score = 89.7 bits (45), Expect = 1e-14 Identities = 45/45 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggc 441 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 tcctttagctggataaggggcggatgtagccaagtggatcaaggc 612
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 456 bits (230), Expect = e-125 Identities = 233/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139955 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 139896 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139895 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 139836 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 139835 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 139776 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139775 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 139722 Score = 456 bits (230), Expect = e-125 Identities = 233/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82782 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 82841 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82842 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 82901 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 82902 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 82961 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82962 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 83015 Score = 450 bits (227), Expect = e-123 Identities = 276/295 (93%) Strand = Plus / Minus Query: 2 ttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtagg 61 ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct: 140349 ttaacgacgagatttagtatcctttcttgtactttcataactcgtgaaatgccgagtagg 140290 Query: 62 cacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140289 cacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 140230 Query: 122 ctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccg 181 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 140229 ttttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgcccg 140170 Query: 182 ggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaa 241 |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 140169 ggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgccaa 140110 Query: 242 taaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 140109 taaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 140055 Score = 450 bits (227), Expect = e-123 Identities = 276/295 (93%) Strand = Plus / Plus Query: 2 ttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtagg 61 ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct: 82388 ttaacgacgagatttagtatcctttcttgtactttcataactcgtgaaatgccgagtagg 82447 Query: 62 cacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82448 cacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 82507 Query: 122 ctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccg 181 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 82508 ttttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgcccg 82567 Query: 182 ggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaa 241 |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 82568 ggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgccaa 82627 Query: 242 taaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 82628 taaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 82682 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 140041 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 139982 Query: 370 taat 373 |||| Sbjct: 139981 taat 139978 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 82696 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 82755 Query: 370 taat 373 |||| Sbjct: 82756 taat 82759
>emb|X53066.1|CHZMRPL2 Maize chloroplast rpl2 gene for ribosomal protein L2 and tRNA-His gene Length = 1797 Score = 456 bits (230), Expect = e-125 Identities = 233/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1670 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 1611 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1610 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 1551 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1550 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 1491 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1490 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 1437 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 1756 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 1697 Query: 370 taat 373 |||| Sbjct: 1696 taat 1693 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 cgtgtcacagctgattactcc 296 ||||||||||||||||||||| Sbjct: 1790 cgtgtcacagctgattactcc 1770
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 456 bits (230), Expect = e-125 Identities = 233/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140025 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 139966 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139965 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 139906 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 139905 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 139846 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139845 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 139792 Score = 456 bits (230), Expect = e-125 Identities = 233/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82812 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 82871 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82872 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 82931 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 82932 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 82991 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82992 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 83045 Score = 450 bits (227), Expect = e-123 Identities = 276/295 (93%) Strand = Plus / Minus Query: 2 ttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtagg 61 ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct: 140419 ttaacgacgagatttagtatcctttcttgtactttcataactcgtgaaatgccgagtagg 140360 Query: 62 cacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140359 cacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 140300 Query: 122 ctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccg 181 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 140299 ttttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgcccg 140240 Query: 182 ggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaa 241 |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 140239 ggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgccaa 140180 Query: 242 taaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 140179 taaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 140125 Score = 450 bits (227), Expect = e-123 Identities = 276/295 (93%) Strand = Plus / Plus Query: 2 ttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtagg 61 ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct: 82418 ttaacgacgagatttagtatcctttcttgtactttcataactcgtgaaatgccgagtagg 82477 Query: 62 cacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82478 cacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 82537 Query: 122 ctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccg 181 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 82538 ttttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgcccg 82597 Query: 182 ggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaa 241 |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 82598 ggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgccaa 82657 Query: 242 taaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 82658 taaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 82712 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 140111 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 140052 Query: 370 taat 373 |||| Sbjct: 140051 taat 140048 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 82726 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 82785 Query: 370 taat 373 |||| Sbjct: 82786 taat 82789
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 456 bits (230), Expect = e-125 Identities = 233/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126822 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 126763 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126762 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 126703 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 126702 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 126643 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126642 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 126589 Score = 456 bits (230), Expect = e-125 Identities = 233/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32295 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 32236 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32235 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 32176 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 32175 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 32116 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32115 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 32062 Score = 299 bits (151), Expect = 6e-78 Identities = 185/199 (92%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 127121 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 127062 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 217 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127061 tgcgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 127002 Query: 218 attgaccttttctatctttgccaataaatgatgagctacaaaaggattcgnnnnnnnncg 277 ||||||||||||||| ||| |||||||||||||||||||||||||||||| || Sbjct: 127001 attgaccttttctattttttccaataaatgatgagctacaaaaggattcgttttttttcg 126942 Query: 278 tgtcacagctgattactcc 296 ||||||||||||||||||| Sbjct: 126941 tgtcacagctgattactcc 126923 Score = 299 bits (151), Expect = 6e-78 Identities = 185/199 (92%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 32594 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 32535 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 217 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32534 tgcgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 32475 Query: 218 attgaccttttctatctttgccaataaatgatgagctacaaaaggattcgnnnnnnnncg 277 ||||||||||||||| ||| |||||||||||||||||||||||||||||| || Sbjct: 32474 attgaccttttctattttttccaataaatgatgagctacaaaaggattcgttttttttcg 32415 Query: 278 tgtcacagctgattactcc 296 ||||||||||||||||||| Sbjct: 32414 tgtcacagctgattactcc 32396 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 126908 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 126849 Query: 370 taatgat 376 ||||||| Sbjct: 126848 taatgat 126842 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32381 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 32322 Query: 370 taatgat 376 ||||||| Sbjct: 32321 taatgat 32315
>dbj|D28336.1|LOLMTI Lolium multiflorum mitochondrial gene Length = 2790 Score = 456 bits (230), Expect = e-125 Identities = 233/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 462 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 463 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattcaaaaaat 522 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 582 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 636 Score = 230 bits (116), Expect = 5e-57 Identities = 158/171 (92%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 94 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 153 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 217 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 154 tttgggtagaatgctagatgcccgagaccacgttactattgtttctttctcctccttcat 213 Query: 218 attgaccttttctatcttt--gccaataaatgatgagctacaaaaggattc 266 |||||||||||| | ||| || ||||||||| |||||||||||||||| Sbjct: 214 cttgaccttttctcttttttatcccataaatgattagctacaaaaggattc 264 Score = 115 bits (58), Expect = 2e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 311 aagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaat 370 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 317 aagagtggcattctatgtccaatatctcgatcgaagtatggaggtcaaaataaatagaat 376 Query: 371 aatgat 376 |||||| Sbjct: 377 aatgat 382 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 cgtgtcacagctgattactcc 296 ||||||||||||||||||||| Sbjct: 281 cgtgtcacagctgattactcc 301
>gb|AY769147.1| Paspalum subciliatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 452 bits (228), Expect = e-124 Identities = 278/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769146.1| Paspalum ramboi psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 452 bits (228), Expect = e-124 Identities = 278/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769138.1| Paspalum lineare psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 536 Score = 452 bits (228), Expect = e-124 Identities = 278/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769134.1| Paspalum flaccidum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 452 bits (228), Expect = e-124 Identities = 278/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769133.1| Paspalum filifolium psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 452 bits (228), Expect = e-124 Identities = 278/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 409 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 350 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 290 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 289 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 231 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 230 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 171 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 170 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 115 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 102 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 43 Query: 370 taatgat 376 ||||||| Sbjct: 42 taatgat 36
>gb|AY769132.1| Paspalum equitans psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 452 bits (228), Expect = e-124 Identities = 278/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769126.1| Paspalum conduplicatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 452 bits (228), Expect = e-124 Identities = 278/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769124.1| Paspalum almum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 452 bits (228), Expect = e-124 Identities = 278/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>emb|Y00141.1|CHZMRP19 Maize chloroplast rps19 gene for ribosomal protein S19 Length = 411 Score = 450 bits (227), Expect = e-123 Identities = 276/295 (93%) Strand = Plus / Minus Query: 2 ttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtagg 61 ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct: 310 ttaacgacgagatttagtatcctttcttgtactttcataactcgtgaaatgccgagtagg 251 Query: 62 cacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 cacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 191 Query: 122 ctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccg 181 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 190 ttttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgcccg 131 Query: 182 ggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaa 241 |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 130 ggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgccaa 71 Query: 242 taaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 70 taaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 16
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 450 bits (227), Expect = e-123 Identities = 276/295 (93%) Strand = Plus / Minus Query: 2 ttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtagg 61 ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct: 61591 ttaacgacgagatttagtatcctttcttgtactttcataactcgtgaaatgccgagtagg 61532 Query: 62 cacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61531 cacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 61472 Query: 122 ctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccg 181 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 61471 ttttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgcccg 61412 Query: 182 ggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaa 241 |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 61411 ggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgccaa 61352 Query: 242 taaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 61351 taaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 61297 Score = 450 bits (227), Expect = e-123 Identities = 276/295 (93%) Strand = Plus / Plus Query: 2 ttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtagg 61 ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct: 3527 ttaacgacgagatttagtatcctttcttgtactttcataactcgtgaaatgccgagtagg 3586 Query: 62 cacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3587 cacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 3646 Query: 122 ctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccg 181 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 3647 ttttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgcccg 3706 Query: 182 ggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaa 241 |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 3707 ggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgccaa 3766 Query: 242 taaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 3767 taaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 3821 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61197 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 61138 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 61137 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaatttccaaaaat 61078 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 61077 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 61018 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61017 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 60964 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3921 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 3980 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3981 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaatttccaaaaat 4040 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4041 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 4100 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4101 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 4154 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 61283 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 61224 Query: 370 taat 373 |||| Sbjct: 61223 taat 61220 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 3835 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 3894 Query: 370 taat 373 |||| Sbjct: 3895 taat 3898
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 450 bits (227), Expect = e-123 Identities = 276/295 (93%) Strand = Plus / Minus Query: 2 ttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtagg 61 ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct: 141147 ttaacgacgagatttagtatcctttcttgtactttcataactcgtgaaatgccgagtagg 141088 Query: 62 cacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141087 cacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 141028 Query: 122 ctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccg 181 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 141027 ttttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgcccg 140968 Query: 182 ggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaa 241 |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 140967 ggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgccaa 140908 Query: 242 taaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 140907 taaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 140853 Score = 450 bits (227), Expect = e-123 Identities = 276/295 (93%) Strand = Plus / Plus Query: 2 ttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtagg 61 ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct: 83084 ttaacgacgagatttagtatcctttcttgtactttcataactcgtgaaatgccgagtagg 83143 Query: 62 cacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83144 cacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 83203 Query: 122 ctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccg 181 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 83204 ttttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgcccg 83263 Query: 182 ggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaa 241 |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||| Sbjct: 83264 ggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgccaa 83323 Query: 242 taaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 83324 taaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 83378 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140753 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 140694 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 140693 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaatttccaaaaat 140634 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 140633 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 140574 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140573 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 140520 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83478 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 83537 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 83538 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaatttccaaaaat 83597 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 83598 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 83657 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83658 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 83711 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 140839 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 140780 Query: 370 taat 373 |||| Sbjct: 140779 taat 140776 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 83392 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 83451 Query: 370 taat 373 |||| Sbjct: 83452 taat 83455
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127897 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 127838 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 127837 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 127778 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 127777 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 127718 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127717 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 127664 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32837 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 32778 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 32777 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 32718 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 32717 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 32658 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32657 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 32604 Score = 307 bits (155), Expect = 2e-80 Identities = 186/199 (93%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 128196 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 128137 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 217 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128136 tgcgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 128077 Query: 218 attgaccttttctatctttgccaataaatgatgagctacaaaaggattcgnnnnnnnncg 277 ||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 128076 attgaccttttctatttttgccaataaatgatgagctacaaaaggattcgttttttttcg 128017 Query: 278 tgtcacagctgattactcc 296 ||||||||||||||||||| Sbjct: 128016 tgtcacagctgattactcc 127998 Score = 307 bits (155), Expect = 2e-80 Identities = 186/199 (93%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 33136 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 33077 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 217 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33076 tgcgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 33017 Query: 218 attgaccttttctatctttgccaataaatgatgagctacaaaaggattcgnnnnnnnncg 277 ||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 33016 attgaccttttctatttttgccaataaatgatgagctacaaaaggattcgttttttttcg 32957 Query: 278 tgtcacagctgattactcc 296 ||||||||||||||||||| Sbjct: 32956 tgtcacagctgattactcc 32938 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 127983 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 127924 Query: 370 taatgat 376 ||||||| Sbjct: 127923 taatgat 127917 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32923 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 32864 Query: 370 taatgat 376 ||||||| Sbjct: 32863 taatgat 32857
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126923 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 126864 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 126863 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 126804 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 126803 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 126744 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126743 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 126690 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32342 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 32283 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 32282 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 32223 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 32222 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 32163 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32162 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 32109 Score = 307 bits (155), Expect = 2e-80 Identities = 186/199 (93%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 127222 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 127163 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 217 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127162 tgcgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 127103 Query: 218 attgaccttttctatctttgccaataaatgatgagctacaaaaggattcgnnnnnnnncg 277 ||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 127102 attgaccttttctatttttgccaataaatgatgagctacaaaaggattcgttttttttcg 127043 Query: 278 tgtcacagctgattactcc 296 ||||||||||||||||||| Sbjct: 127042 tgtcacagctgattactcc 127024 Score = 307 bits (155), Expect = 2e-80 Identities = 186/199 (93%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 32641 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 32582 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 217 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32581 tgcgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 32522 Query: 218 attgaccttttctatctttgccaataaatgatgagctacaaaaggattcgnnnnnnnncg 277 ||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 32521 attgaccttttctatttttgccaataaatgatgagctacaaaaggattcgttttttttcg 32462 Query: 278 tgtcacagctgattactcc 296 ||||||||||||||||||| Sbjct: 32461 tgtcacagctgattactcc 32443 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 127009 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 126950 Query: 370 taatgat 376 ||||||| Sbjct: 126949 taatgat 126943 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32428 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 32369 Query: 370 taatgat 376 ||||||| Sbjct: 32368 taatgat 32362
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126923 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 126864 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 126863 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 126804 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 126803 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 126744 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126743 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 126690 Score = 448 bits (226), Expect = e-122 Identities = 232/234 (99%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32342 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 32283 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 32282 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 32223 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 32222 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 32163 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32162 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 32109 Score = 323 bits (163), Expect = 4e-85 Identities = 188/199 (94%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 32641 tgttatgtaaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccat 32582 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 217 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32581 tgcgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 32522 Query: 218 attgaccttttctatctttgccaataaatgatgagctacaaaaggattcgnnnnnnnncg 277 ||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 32521 attgaccttttctatttttgccaataaatgatgagctacaaaaggattcgttttttttcg 32462 Query: 278 tgtcacagctgattactcc 296 ||||||||||||||||||| Sbjct: 32461 tgtcacagctgattactcc 32443 Score = 315 bits (159), Expect = 1e-82 Identities = 187/199 (93%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 127222 tgttatataaataggtatatgttcctttccattatgaatcgcgattgtatggccaaccat 127163 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 217 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127162 tgcgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 127103 Query: 218 attgaccttttctatctttgccaataaatgatgagctacaaaaggattcgnnnnnnnncg 277 ||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 127102 attgaccttttctatttttgccaataaatgatgagctacaaaaggattcgttttttttcg 127043 Query: 278 tgtcacagctgattactcc 296 ||||||||||||||||||| Sbjct: 127042 tgtcacagctgattactcc 127024 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 127009 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 126950 Query: 370 taatgat 376 ||||||| Sbjct: 126949 taatgat 126943 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 32428 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 32369 Query: 370 taatgat 376 ||||||| Sbjct: 32368 taatgat 32362
>gb|L40578.1|RICCPRPM Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190) genes, complete cds, transfer RNA-Ile and -His genes and photosystem II (psbA) gene, 3' end Length = 2799 Score = 448 bits (226), Expect = e-122 Identities = 238/242 (98%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2196 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 2137 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2136 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 2077 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2076 gcaattcttcatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 2017 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggggttgtg 636 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2016 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggggttgtg 1957 Query: 637 gg 638 || Sbjct: 1956 gg 1955 Score = 426 bits (215), Expect = e-116 Identities = 254/267 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 2592 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 2533 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2532 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 2473 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct: 2472 cctttccattatgaatcgcgattgtatggccaaccattgcgggatgaatgctagatgccc 2413 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 2412 gggaccacgttactattgtttctttctctctcttcatattgaccttttctatttttgcca 2353 Query: 241 ataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||||||||||| Sbjct: 2352 ataaatgatgagctacaaaaggattcg 2326 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 2282 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggctagaataaatagaa 2223 Query: 370 taatgat 376 ||||||| Sbjct: 2222 taatgat 2216
>gb|AY769149.1| Paspalum vaginatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 444 bits (224), Expect = e-121 Identities = 278/296 (93%), Gaps = 2/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 410 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 351 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 291 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 290 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 232 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 231 gggaccacgttactattatttctttctcctccttcatattgaccttttcgat-tttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtggcatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769145.1| Paspalum pumilum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 536 Score = 444 bits (224), Expect = e-121 Identities = 277/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacccaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 312 agagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaata 371 ||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||||| Sbjct: 101 agagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaata 42 Query: 372 atgat 376 ||||| Sbjct: 41 atgat 37
>gb|AY769143.1| Paspalum pallens psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 542 Score = 444 bits (224), Expect = e-121 Identities = 277/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgggatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769142.1| Paspalum notatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 444 bits (224), Expect = e-121 Identities = 277/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttacgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769128.1| Paspalum dasypleurum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 444 bits (224), Expect = e-121 Identities = 277/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| |||||||||||||||||||||| |||||||| || ||||||| Sbjct: 232 gggaccacgttactattatttctttctcctccttcatatttaccttttcgatttttgcca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769127.1| Paspalum cromyorhizon psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 444 bits (224), Expect = e-121 Identities = 277/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||| || Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgtca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769123.1| Paspalum acuminatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 538 Score = 444 bits (224), Expect = e-121 Identities = 277/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 412 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 353 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 293 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 292 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 234 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 233 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 174 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||| | ||||||||||||||||||||| Sbjct: 173 ataaatgacgagctacaaaaggatttgttttttttcgtgtcacagctgattactcc 118 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 313 gagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaataa 372 ||||||||| ||||||||| |||||||||||| ||| | ||||||||||||||||||||| Sbjct: 101 gagtggcatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaataa 42 Query: 373 tgat 376 |||| Sbjct: 41 tgat 38
>gb|AY941124.1| Axonopus rosengurttii psbA-trnH intergenic spacer, partial sequence; and rpl19 gene, complete cds; chloroplast Length = 494 Score = 444 bits (224), Expect = e-121 Identities = 276/296 (93%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 381 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 322 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 321 gcacgaattcccctaatttgcgccctaccataggatttgttatgtaaataggtatatgtt 262 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 202 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||| ||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 201 gggaccatgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 142 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 141 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 86 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 73 aaagagtggcatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 14 Query: 370 taatgat 376 ||||||| Sbjct: 13 taatgat 7
>gb|AY769135.1| Paspalum intermedium psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 442 bits (223), Expect = e-121 Identities = 257/267 (96%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 410 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 351 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 291 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 290 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 232 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 231 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 172 Query: 241 ataaatgatgagctacaaaaggattcg 267 |||||||| |||||||||||||||||| Sbjct: 171 ataaatgacgagctacaaaaggattcg 145 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaat 365 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||| Sbjct: 102 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaat 47
>gb|DQ006213.1| Arthraxon hispidus voucher Wells 5171 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 614 Score = 442 bits (223), Expect = e-121 Identities = 275/295 (93%) Strand = Plus / Plus Query: 2 ttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtagg 61 ||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct: 177 ttaacgacgagatttagtatcctttcttgtactttcataactcgtgaaatgccgagtagg 236 Query: 62 cacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 121 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 cacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgttc 296 Query: 122 ctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccg 181 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 297 ttttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgcccg 356 Query: 182 ggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaa 241 |||||||||||||||| ||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 357 ggaccacgttactattatttctttctcctctttcatattgaccttttcgatttttgccaa 416 Query: 242 taaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 417 taaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 471 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 484 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 543 Query: 370 taat 373 |||| Sbjct: 544 taat 547 Score = 89.7 bits (45), Expect = 1e-14 Identities = 45/45 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggc 441 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 tcctttagctggataaggggcggatgtagccaagtggatcaaggc 614
>gb|AY769144.1| Paspalum pauciciliatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 538 Score = 440 bits (222), Expect = e-120 Identities = 275/294 (93%), Gaps = 1/294 (0%) Strand = Plus / Minus Query: 3 taacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtaggc 62 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 406 taacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtaggc 347 Query: 63 acgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttcc 122 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 acgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgttcc 287 Query: 123 tttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccgg 182 ||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 286 tttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gcccgg 228 Query: 183 gaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaat 242 ||||||||||||||| |||||||||||||||||||||| |||||||| || ||||||||| Sbjct: 227 gaccacgttactattatttctttctcctccttcatatttaccttttcgatttttgccaat 168 Query: 243 aaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 167 aaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 114 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaataga 368 ||||||||| || ||||||||| |||||||||||| ||| | ||||||||||||||||| Sbjct: 101 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaataga 43
>gb|AY769140.1| Paspalum maculosum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 538 Score = 438 bits (221), Expect = e-119 Identities = 278/297 (93%), Gaps = 2/297 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttg-cattttcataactcgtaaaatgccgagta 59 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| Sbjct: 412 gttaacgacgagatttagtatcctttcttggcactttcataactcgtgaaatgccgagta 353 Query: 60 ggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgt 119 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 ggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgt 293 Query: 120 tcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcc 179 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| Sbjct: 292 tcctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gcc 234 Query: 180 cgggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcc 239 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct: 233 cgggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcc 174 Query: 240 aataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 173 aataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769136.1| Paspalum ionanthum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 438 bits (221), Expect = e-119 Identities = 276/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | || Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gtcc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||| || Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgnca 173 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769131.1| Paspalum ellipticum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 438 bits (221), Expect = e-119 Identities = 278/297 (93%), Gaps = 2/297 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttg-cattttcataactcgtaaaatgccgagta 59 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| Sbjct: 412 gttaacgacgagatttagtatcctttcttggcactttcataactcgtgaaatgccgagta 353 Query: 60 ggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgt 119 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 ggcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgt 293 Query: 120 tcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcc 179 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| Sbjct: 292 tcctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gcc 234 Query: 180 cgggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcc 239 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct: 233 cgggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcc 174 Query: 240 aataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 173 aataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769121.1| Axonopus polystachyus psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 436 bits (220), Expect = e-119 Identities = 276/296 (93%), Gaps = 1/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 410 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 351 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 350 gcacgaattcccctaatttgcgccctaccataggatttgttatgtaaataggtatatgtt 291 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 290 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 232 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 231 gggaccatgttactattatttctttctcctccttcatattgaccttttctatttttgcca 172 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 171 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 116 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 103 aaagagtggcatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 44 Query: 370 taatgat 376 ||||||| Sbjct: 43 taatgat 37
>gb|AY769148.1| Paspalum urvillei psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 546 Score = 434 bits (219), Expect = e-118 Identities = 256/267 (95%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 421 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 362 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 302 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 301 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 243 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| |||||||||||||||||||||| |||||||| || ||||||| Sbjct: 242 gggaccacgttactattatttctttctcctccttcatatttaccttttcgatttttgcca 183 Query: 241 ataaatgatgagctacaaaaggattcg 267 |||||||| |||||||||||||||||| Sbjct: 182 ataaatgacgagctacaaaaggattcg 156 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 323 ctatgtccaatatctcgatcgaagtacggaggtcagaataaa 364 ||||||||| |||||||||||| ||| | ||||||||||||| Sbjct: 95 ctatgtccactatctcgatcgaggtatgtaggtcagaataaa 54
>gb|AY769137.1| Paspalum juergensii psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 540 Score = 434 bits (219), Expect = e-118 Identities = 256/267 (95%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 418 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 359 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 299 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 298 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 240 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| |||||||||||||||||||||| |||||||| || ||||||| Sbjct: 239 gggaccacgttactattatttctttctcctccttcatatttaccttttcgatttttgcca 180 Query: 241 ataaatgatgagctacaaaaggattcg 267 |||||||| |||||||||||||||||| Sbjct: 179 ataaatgacgagctacaaaaggattcg 153 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Minus Query: 312 agagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaata 371 ||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||||| Sbjct: 106 agagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaata 47 Query: 372 a 372 | Sbjct: 46 a 46
>gb|AY769141.1| Paspalum minus psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 430 bits (217), Expect = e-117 Identities = 277/297 (93%), Gaps = 2/297 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 411 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 352 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 351 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaatgggtatatgtt 292 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 291 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 233 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttg-cc 239 ||||||||||||||||| ||||||||||||||||||||||||||||||| || |||| || Sbjct: 232 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgccc 173 Query: 240 aataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 172 aataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 116 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||| || ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 103 aaagagtgggatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 44 Query: 370 taatgat 376 ||||||| Sbjct: 43 taatgat 37
>gb|AY769119.1| Axonopus compressus psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 533 Score = 428 bits (216), Expect = e-116 Identities = 276/296 (93%), Gaps = 2/296 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 412 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 353 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 352 gcacgaattcccctaatttgcgccctaccataggatttgttatgtaaataggtatatgtt 293 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 292 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 234 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 233 gggaccatgttactattatttctttctcctccttcatattgaccttttctat-tttgcca 175 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 174 ataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 119 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 106 aaagagtggcatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 47 Query: 370 taatgat 376 ||||||| Sbjct: 46 taatgat 40
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 428 bits (216), Expect = e-116 Identities = 274/296 (92%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 11412152 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 11412211 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 11412212 gtacgaattcccccaatttgcgacctatcataagatttgttatgtaaataggtatatgtt 11412271 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 11412272 cctttccattatgaatcgtgattgtatggccaaccattgcgggtagaatgctagatgccc 11412331 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 11412332 gggaccatgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 11412391 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 11412392 ataaatgatgagctacaaaagaattctttttttttcgtgtcacagctgattactcc 11412447 Score = 424 bits (214), Expect = e-115 Identities = 229/234 (97%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11412549 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 11412608 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 11412609 caccatgcgcgggtttaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 11412668 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 11412669 gcaattttccatattcctagttacgtatttacttacaacgacgaagaataaaactatcac 11412728 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11412729 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 11412782 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 490 catcgcattattgcaaattccaaaaatgcaattttccatattcctagttacgtatttact 549 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 24716677 catcgcattattgcaaattccaaaaatgcaattttccatattcctagttacgcatttact 24716736 Query: 550 tacggcg 556 ||||||| Sbjct: 24716737 tacggcg 24716743 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 11412463 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 11412522 Query: 370 taatgat 376 ||||||| Sbjct: 11412523 taatgat 11412529
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 428 bits (216), Expect = e-116 Identities = 274/296 (92%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 11411823 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 11411882 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 11411883 gtacgaattcccccaatttgcgacctatcataagatttgttatgtaaataggtatatgtt 11411942 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 11411943 cctttccattatgaatcgtgattgtatggccaaccattgcgggtagaatgctagatgccc 11412002 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 11412003 gggaccatgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 11412062 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 11412063 ataaatgatgagctacaaaagaattctttttttttcgtgtcacagctgattactcc 11412118 Score = 424 bits (214), Expect = e-115 Identities = 229/234 (97%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11412220 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 11412279 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 11412280 caccatgcgcgggtttaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 11412339 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 11412340 gcaattttccatattcctagttacgtatttacttacaacgacgaagaataaaactatcac 11412399 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11412400 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 11412453 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 490 catcgcattattgcaaattccaaaaatgcaattttccatattcctagttacgtatttact 549 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 24644883 catcgcattattgcaaattccaaaaatgcaattttccatattcctagttacgcatttact 24644942 Query: 550 tacggcg 556 ||||||| Sbjct: 24644943 tacggcg 24644949 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 11412134 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 11412193 Query: 370 taatgat 376 ||||||| Sbjct: 11412194 taatgat 11412200
>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167806 Score = 428 bits (216), Expect = e-116 Identities = 274/296 (92%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 124812 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 124753 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 124752 gtacgaattcccccaatttgcgacctatcataagatttgttatgtaaataggtatatgtt 124693 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 124692 cctttccattatgaatcgtgattgtatggccaaccattgcgggtagaatgctagatgccc 124633 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 124632 gggaccatgttactattgtttctttctcctccttcatattgaccttttctatttttgcca 124573 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 124572 ataaatgatgagctacaaaagaattctttttttttcgtgtcacagctgattactcc 124517 Score = 424 bits (214), Expect = e-115 Identities = 229/234 (97%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124415 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 124356 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 124355 caccatgcgcgggtttaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 124296 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 124295 gcaattttccatattcctagttacgtatttacttacaacgacgaagaataaaactatcac 124236 Query: 577 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124235 tatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 124182 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 124501 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 124442 Query: 370 taatgat 376 ||||||| Sbjct: 124441 taatgat 124435
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 426 bits (215), Expect = e-116 Identities = 233/239 (97%), Gaps = 5/239 (2%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346851 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 346910 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346911 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 346970 Query: 517 gcaattttccatattcctagttacgtattta-----cttacggcgacgaagaataaaact 571 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 346971 gcaattttccatattcctagttacgtatttacttaccttacggcgacgaagaataaaact 347030 Query: 572 atcgctatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347031 atcactatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 347089 Score = 256 bits (129), Expect = 8e-65 Identities = 163/174 (93%), Gaps = 4/174 (2%) Strand = Plus / Plus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 346558 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 346617 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttacta----ttgtttctttctcctcct 213 || ||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 346618 tgcgggtagaatgctagatgcccgggaccacgttactattatttatttctttctcctcct 346677 Query: 214 tcatattgaccttttctatctttgccaataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 346678 tcatattgaccttttctatttttgccaataaatgacgagctacaaaaggattcg 346731 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 346765 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 346824 Query: 370 taat 373 |||| Sbjct: 346825 taat 346828
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 426 bits (215), Expect = e-116 Identities = 233/239 (97%), Gaps = 5/239 (2%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208858 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 208799 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208798 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 208739 Query: 517 gcaattttccatattcctagttacgtattta-----cttacggcgacgaagaataaaact 571 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 208738 gcaattttccatattcctagttacgtatttacttaccttacggcgacgaagaataaaact 208679 Query: 572 atcgctatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208678 atcactatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 208620 Score = 426 bits (215), Expect = e-116 Identities = 233/239 (97%), Gaps = 5/239 (2%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80166 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 80107 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80106 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 80047 Query: 517 gcaattttccatattcctagttacgtattta-----cttacggcgacgaagaataaaact 571 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 80046 gcaattttccatattcctagttacgtatttacttaccttacggcgacgaagaataaaact 79987 Query: 572 atcgctatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79986 atcactatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 79928 Score = 256 bits (129), Expect = 8e-65 Identities = 163/174 (93%), Gaps = 4/174 (2%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 209151 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 209092 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttacta----ttgtttctttctcctcct 213 || ||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 209091 tgcgggtagaatgctagatgcccgggaccacgttactattatttatttctttctcctcct 209032 Query: 214 tcatattgaccttttctatctttgccaataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 209031 tcatattgaccttttctatttttgccaataaatgacgagctacaaaaggattcg 208978 Score = 256 bits (129), Expect = 8e-65 Identities = 163/174 (93%), Gaps = 4/174 (2%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 80459 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 80400 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttacta----ttgtttctttctcctcct 213 || ||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 80399 tgcgggtagaatgctagatgcccgggaccacgttactattatttatttctttctcctcct 80340 Query: 214 tcatattgaccttttctatctttgccaataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 80339 tcatattgaccttttctatttttgccaataaatgacgagctacaaaaggattcg 80286 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 208944 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 208885 Query: 370 taat 373 |||| Sbjct: 208884 taat 208881 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 80252 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 80193 Query: 370 taat 373 |||| Sbjct: 80192 taat 80189
>gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190) genes, complete cds, ribosomal protein L22 (rpL22) gene, 5' end, transfer RNA-Ile and -His genes Length = 2789 Score = 426 bits (215), Expect = e-116 Identities = 254/267 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 2592 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 2533 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2532 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 2473 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct: 2472 cctttccattatgaatcgcgattgtatggccaaccattgcgggatgaatgctagatgccc 2413 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 2412 gggaccacgttactattgtttctttctctctcttcatattgaccttttctatttttgcca 2353 Query: 241 ataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||||||||||| Sbjct: 2352 ataaatgatgagctacaaaaggattcg 2326 Score = 272 bits (137), Expect = 1e-69 Identities = 149/153 (97%) Strand = Plus / Minus Query: 486 cgcccatcgcattattgcaaattccaaaaatgcaattttccatattcctagttacgtatt 545 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 2107 cgcccatcccattattgcaaattccaaaaatgcaattcttcatattcctagttacgtatt 2048 Query: 546 tacttacggcgacgaagaataaaactatcgctatattttttccttttcctagttcttctt 605 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2047 tacttacggcgacgaagaataaaactatcactatattttttccttttcctagttcttctt 1988 Query: 606 ccaagcgcaggataaccccaagggggttgtggg 638 ||||||||||||||||||||||||||||||||| Sbjct: 1987 ccaagcgcaggataaccccaagggggttgtggg 1955 Score = 153 bits (77), Expect = 9e-34 Identities = 77/77 (100%) Strand = Plus / Plus Query: 414 gggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttca 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2103 gggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttca 2162 Query: 474 attcccgtcgttcgccc 490 ||||||||||||||||| Sbjct: 2163 attcccgtcgttcgccc 2179 Score = 101 bits (51), Expect = 3e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 2282 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggctagaataaatagaa 2223 Query: 370 taatgat 376 ||||||| Sbjct: 2222 taatgat 2216 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcg 418 |||||||||||||||||||||| Sbjct: 2196 tcctttagctggataaggggcg 2175
>gb|AF527485.1| Chloroplast transformation vector pVSR326, complete sequence Length = 9152 Score = 424 bits (214), Expect = e-115 Identities = 241/250 (96%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 4138 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 4197 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4198 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 4257 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 4258 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctagatgccc 4317 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 4318 gggaccacgttactattgtttctttctcctccttcatattgagcttttctatttttgcca 4377 Query: 241 ataaatgatg 250 |||||||||| Sbjct: 4378 ataaatgatg 4387
>dbj|D13101.1|RICMT05 Oryza sativa (japonica cultivar-group) mitochondrial gene for tRNA-His, complete sequence, clone:pMTVSCT Length = 3019 Score = 424 bits (214), Expect = e-115 Identities = 223/226 (98%) Strand = Plus / Minus Query: 398 cctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatcc 457 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2267 cctttagctggataaggggcggatgtacccaagtggatcaaggcagtggattgtgaatcc 2208 Query: 458 accatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaatg 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2207 accatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaatg 2148 Query: 518 caattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgct 577 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2147 caattttccatatacctagttacgtatttacttacggcgacgaagaataaaactatcact 2088 Query: 578 atattttttccttttcctagttcttcttccaagcgcaggataaccc 623 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2087 atattttttccttttcctagttcttcttccaagcgcaggataaccc 2042 Score = 260 bits (131), Expect = 5e-66 Identities = 180/199 (90%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 2568 tgttatataaataggtaaatgttcctttccattatgaatggcgattgtatggccaaccat 2509 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 217 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2508 tgcgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 2449 Query: 218 attgaccttttctatctttgccaataaatgatgagctacaaaaggattcgnnnnnnnncg 277 ||||||||||||||| ||| ||||| | |||||||||||||||||||| || Sbjct: 2448 attgaccttttctatttttttaaataagtcatgagctacaaaaggattcgttttttttcg 2389 Query: 278 tgtcacagctgattactcc 296 ||||||||||||||||||| Sbjct: 2388 tgtcacagctgattactcc 2370 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2354 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 2295 Query: 370 taatgat 376 ||||||| Sbjct: 2294 taatgat 2288
>gb|AY769120.1| Axonopus siccus psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 536 Score = 422 bits (213), Expect = e-115 Identities = 276/297 (92%), Gaps = 2/297 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttg-cattttcataactcgtaaaatgccgagta 59 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| Sbjct: 412 gttaacgacgagatttagtatcctttcttggcactttcataactcgtgaaatgccgagta 353 Query: 60 ggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgt 119 ||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 352 ggcacgaattcccctaatttgcgccctaccataggatttgttatgtaaataggtatatgt 293 Query: 120 tcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcc 179 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| Sbjct: 292 tcctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gcc 234 Query: 180 cgggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcc 239 |||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 233 cgggaccatgttactattatttctttctcctccttcatattgaccttttctatttttgcc 174 Query: 240 aataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 173 aataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 117 Score = 93.7 bits (47), Expect = 7e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 104 aaagagtggcatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaa 45 Query: 370 taatgat 376 ||||||| Sbjct: 44 taatgat 38
>gb|AY769118.1| Axonopus brasiliensis psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 537 Score = 422 bits (213), Expect = e-115 Identities = 276/297 (92%), Gaps = 2/297 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttg-cattttcataactcgtaaaatgccgagta 59 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| Sbjct: 415 gttaacgacgagatttagtatcctttcttggcactttcataactcgtgaaatgccgagta 356 Query: 60 ggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgt 119 ||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 355 ggcacgaattcccctaatttgcgccctaccataggatttgttatgtaaataggtatatgt 296 Query: 120 tcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcc 179 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| Sbjct: 295 tcctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gcc 237 Query: 180 cgggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcc 239 |||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 236 cgggaccatgttactattatttctttctcctccttcatattgaccttttctatttttgcc 177 Query: 240 aataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 176 aataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 120 Score = 79.8 bits (40), Expect = 1e-11 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaat-aaataga 368 |||||||||||| ||||||||| |||||||||||| ||| | |||||||||| ||||||| Sbjct: 107 aaagagtggcatcctatgtccactatctcgatcgaggtatgtaggtcagaataaaataga 48 Query: 369 ataatgat 376 |||||||| Sbjct: 47 ataatgat 40
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 418 bits (211), Expect = e-114 Identities = 232/239 (97%), Gaps = 5/239 (2%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542863 tcctttcgctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 542804 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542803 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 542744 Query: 517 gcaattttccatattcctagttacgtattta-----cttacggcgacgaagaataaaact 571 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 542743 gcaattttccatattcctagttacgtatttacttaccttacggcgacgaagaataaaact 542684 Query: 572 atcgctatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542683 atcactatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 542625 Score = 256 bits (129), Expect = 8e-65 Identities = 163/174 (93%), Gaps = 4/174 (2%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 543156 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 543097 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttacta----ttgtttctttctcctcct 213 || ||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 543096 tgcgggtagaatgctagatgcccgggaccacgttactattatttatttctttctcctcct 543037 Query: 214 tcatattgaccttttctatctttgccaataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 543036 tcatattgaccttttctatttttgccaataaatgacgagctacaaaaggattcg 542983 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 542949 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 542890 Query: 370 taat 373 |||| Sbjct: 542889 taat 542886
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 418 bits (211), Expect = e-114 Identities = 232/239 (97%), Gaps = 5/239 (2%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464825 tcctttcgctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 464766 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464765 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 464706 Query: 517 gcaattttccatattcctagttacgtattta-----cttacggcgacgaagaataaaact 571 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 464705 gcaattttccatattcctagttacgtatttacttaccttacggcgacgaagaataaaact 464646 Query: 572 atcgctatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464645 atcactatattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 464587 Score = 256 bits (129), Expect = 8e-65 Identities = 163/174 (93%), Gaps = 4/174 (2%) Strand = Plus / Minus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 465118 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 465059 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttacta----ttgtttctttctcctcct 213 || ||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 465058 tgcgggtagaatgctagatgcccgggaccacgttactattatttatttctttctcctcct 464999 Query: 214 tcatattgaccttttctatctttgccaataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 464998 tcatattgaccttttctatttttgccaataaatgacgagctacaaaaggattcg 464945 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 464911 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 464852 Query: 370 taat 373 |||| Sbjct: 464851 taat 464848
>gb|AY769139.1| Paspalum lividum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 523 Score = 418 bits (211), Expect = e-114 Identities = 276/296 (93%), Gaps = 3/296 (1%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 394 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 335 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 275 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 274 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 216 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| Sbjct: 215 gggaccacgttactattatttctttctcctccttcatattgaccttttcgatttttgcca 156 Query: 241 ataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 ||||||| |||||||||| ||||||| ||||||||||||||||||||| Sbjct: 155 ttaaatgacgagctacaaa-ggattcgttttttt-cgtgtcacagctgattactcc 102
>gb|AY769117.1| Axonopus argentinus psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 535 Score = 412 bits (208), Expect = e-112 Identities = 276/297 (92%), Gaps = 3/297 (1%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 412 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 353 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 352 gcacgaattcccctaatttgcgccctaccataggatttgttatgtaaataggtatatgtt 293 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 292 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 234 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttttctatctttgcca 240 ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 233 gggaccatgttactattatttctttctcctccttcatattgaccttttctatttttgcca 174 Query: 241 ataaatgatgagctacaaaa-ggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||| ||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 173 ataaatgacgagctacaaaaaggattcgttttttt-cgtgtcacagctgattactcc 118 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 313 gagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaataa 372 ||||||||| ||||||||| |||||||||||| ||| | ||||||||||||||||||||| Sbjct: 101 gagtggcatcctatgtccactatctcgatcgaggtatgtaggtcagaataaatagaataa 42 Query: 373 tgat 376 |||| Sbjct: 41 tgat 38
>gb|AY769129.1| Paspalum dedeccae psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 543 Score = 389 bits (196), Expect = e-105 Identities = 273/298 (91%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 416 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 357 Query: 61 gcacgaattctcccaattt-gcgacctaccataggatttgttatgtaaataggtatatgt 119 |||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gcacgaatncccccaattaagcgacctaccataggatttgttatgtaaataggtatatgt 297 Query: 120 tcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcc 179 |||||||||||||||||||| ||||||||||||||||||| |||||||||||| || ||| Sbjct: 296 tcctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctcga-gcc 238 Query: 180 cgggaccacgttactattgt-ttctttctcctccttcatattgaccttttctatctttgc 238 |||||||||||||||||| | | ||| |||||||||||||||||||||||| || ||||| Sbjct: 237 cgggaccacgttactattatatacttnctcctccttcatattgaccttttcgatttttgc 178 Query: 239 caataaatgatgagctacaaaaggattcgnnnnnnnncgtgtcacagctgattactcc 296 |||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 177 caataaatgacgagctacaaaaggattcgttttttttcgtgtcacagctgattactcc 120 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 312 agagtggcattctatgtccaatatctcgatcgaagtacg-gaggtcagaataaatagaat 370 ||||||| || ||||||||| |||||||||||| ||| | ||||| ||||||||||||| Sbjct: 103 agagtgggatcctatgtccactatctcgatcgaggtatgtaaggtcngaataaatagaat 44 Query: 371 aatgat 376 |||||| Sbjct: 43 aatgat 38
>gb|J01424.1|MZECPTGH Maize chloroplast His-tRNA gene on Ecol fragment Length = 300 Score = 359 bits (181), Expect = 7e-96 Identities = 184/185 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 175 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 235 Query: 517 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 236 gcaattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcac 295 Query: 577 tatat 581 ||||| Sbjct: 296 tatat 300 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 30 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 89 Query: 370 taat 373 |||| Sbjct: 90 taat 93
>gb|AY769130.1| Paspalum dilatatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 508 Score = 349 bits (176), Expect = 7e-93 Identities = 216/227 (95%), Gaps = 2/227 (0%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 382 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 323 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 263 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgccc 180 ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| Sbjct: 262 cctttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgctaga-gccc 204 Query: 181 gggaccacgttactattgtttctttctcctccttcatattgaccttt 227 ||||| |||||||||| |||| ||||||||||||||||| |||||| Sbjct: 203 gggacaccgttactattatttc-ttctcctccttcatattnaccttt 158
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 270 bits (136), Expect = 5e-69 Identities = 163/172 (94%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| | Sbjct: 176 gttaacgacgagatttagtatcctttcttacactttcataactcgtgaaatgccgagttg 117 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 57 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgct 172 |||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 56 actttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgct 5
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 270 bits (136), Expect = 5e-69 Identities = 163/172 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| | Sbjct: 89478 gttaacgacgagatttagtatcctttcttacactttcataactcgtgaaatgccgagttg 89537 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89538 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 89597 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgct 172 |||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 89598 actttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgct 89649
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 270 bits (136), Expect = 5e-69 Identities = 163/172 (94%) Strand = Plus / Plus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 ||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| | Sbjct: 15454 gttaacgacgagatttagtatcctttcttacactttcataactcgtgaaatgccgagttg 15513 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15514 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 15573 Query: 121 cctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgct 172 |||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 15574 actttccattatgaatcgcgattgtatggccaaccattgcgggtagaatgct 15625
>dbj|D28337.1|SRGMTI Sorghum bicolor mitochondrial gene Length = 439 Score = 258 bits (130), Expect = 2e-65 Identities = 181/199 (90%), Gaps = 1/199 (0%) Strand = Plus / Plus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 94 tgttatataaataggtaaatgtccctttccattatgaatcgcgattgtatggccaaccat 153 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctccttcat 217 || ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 154 tgcgggtagaatgctagatgcccgggaccacgttactatttttcctttctcctccttcat 213 Query: 218 attgaccttttctatctttgccaataaatgatgagctacaaaaggattcgnnnnnnnncg 277 |||||||||||| || ||||||||||||||| |||||||||||||||||| || Sbjct: 214 attgaccttttcgatttttgccaataaatgacgagctacaaaaggattcgttttttt-cg 272 Query: 278 tgtcacagctgattactcc 296 ||||||||||||||||||| Sbjct: 273 tgtcacagctgattactcc 291 Score = 99.6 bits (50), Expect = 1e-17 Identities = 50/50 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtgg 446 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtgg 439 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| | ||| |||||||||||| | Sbjct: 305 aaagagtggcatcctatgtccactatctcgatcgaggtatgtagggcagaataaatagga 364 Query: 370 taat 373 |||| Sbjct: 365 taat 368
>dbj|AB128634.1| Oryza granulata chloroplast DNA, containing SSR region (RCt12), strain:W0022 Length = 332 Score = 256 bits (129), Expect = 8e-65 Identities = 141/145 (97%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128633.1| Oryza granulata chloroplast DNA, containing SSR region (RCt12), strain:W0067 Length = 332 Score = 256 bits (129), Expect = 8e-65 Identities = 141/145 (97%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagtag 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128637.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt12), strain:W1620 Length = 332 Score = 248 bits (125), Expect = 2e-62 Identities = 140/145 (96%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgacgagtag 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128636.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt12), strain:W1345 Length = 332 Score = 248 bits (125), Expect = 2e-62 Identities = 140/145 (96%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgacgagtag 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128631.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt12), strain:W0001 Length = 333 Score = 248 bits (125), Expect = 2e-62 Identities = 140/145 (96%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgacgagtag 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128630.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt12), strain:W1220 Length = 333 Score = 248 bits (125), Expect = 2e-62 Identities = 140/145 (96%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgacgagtag 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128629.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt12), strain:W0604 Length = 333 Score = 248 bits (125), Expect = 2e-62 Identities = 140/145 (96%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgacgagtag 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128628.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt12), strain:W1228 Length = 333 Score = 248 bits (125), Expect = 2e-62 Identities = 140/145 (96%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgacgagtag 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gcacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>gb|M16837.1|MZEMTHA1 Maize mitochondrial His-tRNA gene, 5' end Length = 510 Score = 248 bits (125), Expect = 2e-62 Identities = 162/174 (93%), Gaps = 4/174 (2%) Strand = Plus / Plus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgcaattgtatggccaaccat 157 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 93 tgttatataaataggtaaatgttcctttccattatgaatcgcgattgtatggccaaccat 152 Query: 158 tgtgggtagaatgctagatgcccgggaccacgttacta----ttgtttctttctcctcct 213 || |||||||||||||||||||||| |||||||||||| || ||||||||||||||| Sbjct: 153 tgcgggtagaatgctagatgcccggaaccacgttactattatttatttctttctcctcct 212 Query: 214 tcatattgaccttttctatctttgccaataaatgatgagctacaaaaggattcg 267 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 213 tcatattgaccttttctatttttgccaataaatgacgagctacaaaaggattcg 266 Score = 240 bits (121), Expect = 5e-60 Identities = 124/125 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 445 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 446 caccatgcgcgggttcaattcccgtcgttcgcccaacgcattattgcaaattccaaaaat 505 Query: 517 gcaat 521 ||||| Sbjct: 506 gcaat 510 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 300 aaagagtggcatcctatgtccactatctcgatcgaggtatggaggtcagaataaatagaa 359 Query: 370 taat 373 |||| Sbjct: 360 taat 363
>ref|NM_195965.1| Oryza sativa (japonica cultivar-group) hypothetical protein ORF82 from chromosome 10 chloroplast insertion (OSJNBb0075K12.14), mRNA Length = 249 Score = 246 bits (124), Expect = 8e-62 Identities = 130/132 (98%) Strand = Plus / Minus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 132 tcctttagctggataaggggcggatgtagccaactggatcaaggcagtggattgtgaatc 73 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaat 516 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 72 caccatgcgcgggttcaattcccgtcgttcgcccatcccattattgcaaattccaaaaat 13 Query: 517 gcaattttccat 528 |||||||||||| Sbjct: 12 gcaattttccat 1 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Minus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 218 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 159 Query: 370 taatgat 376 ||||||| Sbjct: 158 taatgat 152
>dbj|AB128665.1| Oryza nivara chloroplast DNA, containing SSR region (RCt12), strain:SL10 Length = 335 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128664.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt12), strain:2001-SL8 Length = 337 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128663.1| Oryza rhizomatis chloroplast DNA, containing SSR region (RCt12), strain:2001-SL3 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128662.1| Oryza alta chloroplast DNA, containing SSR region (RCt12), strain:105138 Length = 335 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128661.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:104154 Length = 333 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128660.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12), strain:W2199 Length = 336 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128659.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12), strain:103812 Length = 334 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128658.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:103887 Length = 333 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128657.1| Oryza brachyantha chloroplast DNA, containing SSR region (RCt12), strain:101232 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| Sbjct: 145 gttaacgacgagatttagtatcttttcttgcactttcataactcgtgaaatgccgagtag 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gcacaaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128656.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12), strain:105267 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128655.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12), strain:103318 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128654.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12), strain:101410 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128653.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12), strain:101397 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128652.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt12), strain:W1635 Length = 336 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128651.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt12), strain:W1625 Length = 334 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128650.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:W1514 Length = 333 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128649.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12), strain:W1169 Length = 334 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128648.1| Oryza barthii chloroplast DNA, containing SSR region (RCt12), strain:W0652 Length = 335 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128647.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12), strain:W0120 Length = 336 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128646.1| Oryza longistaminata chloroplast DNA, containing SSR region (RCt12), strain:W1499 Length = 337 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128645.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt12), strain:W1183 Length = 336 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128644.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12), strain:W2078 Length = 334 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128643.1| Oryza longistaminata chloroplast DNA, containing SSR region (RCt12), strain:W1421 Length = 337 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128642.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12), strain:W2099 Length = 334 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128641.1| Oryza longistaminata chloroplast DNA, containing SSR region (RCt12), strain:W1650 Length = 337 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128640.1| Oryza sativa chloroplast DNA, containing SSR region (RCt12) Length = 336 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128639.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt12), strain:W0157 Length = 335 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128638.1| Oryza glaberrima chloroplast DNA, containing SSR region (RCt12), strain:Tog5923 Length = 335 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128635.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt12), strain:W0048 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128632.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt12), strain:W1639 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128627.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt12), strain:W1480B Length = 335 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128626.1| Oryza alta chloroplast DNA, containing SSR region (RCt12), strain:W0018 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128625.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt12), strain:W0613 Length = 335 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128624.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:W1564 Length = 337 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128623.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:W0043 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128622.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt12), strain:W1525 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128621.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12), strain:W0614 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128620.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12), strain:NIAS WBC6 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128619.1| Oryza punctata chloroplast DNA, containing SSR region (RCt12), strain:W0015 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128618.1| Oryza minuta chloroplast DNA, containing SSR region (RCt12), strain:W1213 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128617.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt12), strain:W1181 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128616.1| Oryza minuta chloroplast DNA, containing SSR region (RCt12), strain:W1337 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>dbj|AB128615.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt12), strain:W0002 Length = 338 Score = 240 bits (121), Expect = 5e-60 Identities = 139/145 (95%) Strand = Plus / Minus Query: 1 gttaacgacgagatttagtatcctttcttgcattttcataactcgtaaaatgccgagtag 60 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | Sbjct: 145 gttaacgacgagatttagtatcctttcttgcactttcataactcgtgaaatgccgagttg 86 Query: 61 gcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 120 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 gtacgaattcccccaatttgcgacctaccataggatttgttatgtaaataggtatatgtt 26 Query: 121 cctttccattatgaatcgcaattgt 145 ||||||||||||||||||| ||||| Sbjct: 25 cctttccattatgaatcgcgattgt 1
>gb|DQ069473.1| Typha latifolia ribosomal protein S19 (rps19) gene, partial cds; chloroplast Length = 276 Score = 228 bits (115), Expect = 2e-56 Identities = 187/211 (88%) Strand = Plus / Minus Query: 55 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 114 ||||||| ||||||||||||||||| ||||||||||| ||| |||||| |||||||||| Sbjct: 232 gagtaggggcgaattctcccaatttgtgacctaccatacgatctgttatataaataggta 173 Query: 115 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 174 ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 172 aatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 113 Query: 175 atgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatct 234 ||||||| ||||| ||||||||| |||||||||||||| |||| |||| ||||| || | Sbjct: 112 atgcccgagaccaagttactattatttctttctcctccctcatgttgagtttttcaattt 53 Query: 235 ttgccaataaatgatgagctacaaaaggatt 265 || || ||||||||| ||||||||||||||| Sbjct: 52 ttcccgataaatgattagctacaaaaggatt 22 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 5 acgacgagatttagtatcctttcttgcat 33 ||||||||||||| |||| |||||||||| Sbjct: 276 acgacgagatttattatcgtttcttgcat 248
>emb|X78185.1|CLHVRPL23 H.vulgare chloroplast rpl23 and rpl2 genes Length = 1841 Score = 222 bits (112), Expect = 1e-54 Identities = 112/112 (100%) Strand = Plus / Minus Query: 519 aattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgcta 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1841 aattttccatattcctagttacgtatttacttacggcgacgaagaataaaactatcgcta 1782 Query: 579 tattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1781 tattttttccttttcctagttcttcttccaagcgcaggataaccccaagggg 1730
>gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1015 Score = 220 bits (111), Expect = 4e-54 Identities = 186/211 (88%) Strand = Plus / Plus Query: 55 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 114 |||||||| |||||||||||||||| ||||||||||| ||| |||||| |||||||||| Sbjct: 643 gagtaggcgcgaattctcccaatttatgacctaccatacgatctgttatataaataggta 702 Query: 115 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 174 ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 703 aatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 762 Query: 175 atgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatct 234 |||||| ||||| |||||||| |||||||||||||| |||| |||| ||||| || | Sbjct: 763 atgccctagaccaagttactataatttctttctcctccctcatgttgagtttttcaattt 822 Query: 235 ttgccaataaatgatgagctacaaaaggatt 265 || |||||||||||| ||||||||||||||| Sbjct: 823 ttcccaataaatgattagctacaaaaggatt 853 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 316 tggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaataatga 375 |||||||||||| ||||||||||||| ||||| | |||| |||||||||| |||||||| Sbjct: 908 tggcattctatgcccaatatctcgatttaagtatgaaggtaagaataaatacaataatga 967 Query: 376 t 376 | Sbjct: 968 t 968 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 2 ttaacgacgagatttagtatcctttcttgcat 33 |||||||||||||||| |||| || ||||||| Sbjct: 596 ttaacgacgagatttattatcgttccttgcat 627
>emb|AJ012137.1|ASA012137 Avena sativa mitochondrial cp-like tRNA-His (GTG) gene Length = 595 Score = 220 bits (111), Expect = 4e-54 Identities = 111/111 (100%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 544 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaat 507 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattgcaaat 595 Score = 167 bits (84), Expect = 6e-38 Identities = 115/123 (93%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 98 tgttatgtaaataggtatatgttcctttccattatgaatcgca-attgtatggccaa--c 154 |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||| | Sbjct: 182 tgttatataaataggtaaatgttcctttccattatgaatcgcgcattgtatggccaaaac 241 Query: 155 cattgtgggtagaatgctagatgcccgggaccacgttactattgtttctttctcctcctt 214 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 242 cattttgggtagaatgctagatgcccgagaccacgttactattgtttctttctcctcctt 301 Query: 215 cat 217 ||| Sbjct: 302 cat 304 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 398 aaagagtggcattctatgtccaatatctcgatcgaagtatggaggtcagaataaatagac 457 Query: 370 taatgat 376 ||||||| Sbjct: 458 taatgat 464 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 cgtgtcacagctgattactcc 296 ||||||||||||||||||||| Sbjct: 361 cgtgtcacagctgattactcc 381
>gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1029 Score = 206 bits (104), Expect = 7e-50 Identities = 185/212 (87%) Strand = Plus / Plus Query: 54 cgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggt 113 ||||||||| |||||||||||||||| ||||||||||| || |||||| ||||||||| Sbjct: 664 cgagtaggcgcgaattctcccaatttatgacctaccatataatctgttatataaataggt 723 Query: 114 atatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgcta 173 | ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| || Sbjct: 724 aaatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggta 783 Query: 174 gatgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatc 233 ||||||| ||||| |||||||| |||||||||||||| |||| |||| ||||| || Sbjct: 784 gatgccctagaccaagttactataatttctttctcctccctcatgttgagtttttccatt 843 Query: 234 tttgccaataaatgatgagctacaaaaggatt 265 ||| || ||||||||| ||||||||||||||| Sbjct: 844 tttcccgataaatgattagctacaaaaggatt 875 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 316 tggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaataatga 375 |||||||||||||||||||||||||| ||||| | |||| |||||||||| |||||||| Sbjct: 930 tggcattctatgtccaatatctcgatttaagtatgaaggtaagaataaatacaataatga 989 Query: 376 t 376 | Sbjct: 990 t 990
>gb|DQ069474.1| Yucca schidigera ribosomal protein S19 (rps19) gene, partial cds; chloroplast Length = 276 Score = 204 bits (103), Expect = 3e-49 Identities = 184/211 (87%) Strand = Plus / Minus Query: 55 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 114 |||||||| ||||||||||||||||| ||||||||||| | | |||||| |||||||||| Sbjct: 232 gagtaggcgcgaattctcccaatttgtgacctaccatacggtctgttatataaataggta 173 Query: 115 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 174 ||||||||||||||||||||| || ||||||||||||| |||| |||||| |||| ||| Sbjct: 172 aatgttcctttccattatgaatagcgattgtatggccaatcattttgggtataatggtag 113 Query: 175 atgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatct 234 ||||||| ||||| ||||||||| |||||||||||||| |||| |||| ||||| || | Sbjct: 112 atgcccgagaccaagttactattatttctttctcctccctcatgttgagtttttccattt 53 Query: 235 ttgccaataaatgatgagctacaaaaggatt 265 || ||||||||| ||||||||||||||| Sbjct: 52 ttctggataaatgattagctacaaaaggatt 22
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 204 bits (103), Expect = 3e-49 Identities = 184/211 (87%) Strand = Plus / Plus Query: 55 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 114 ||||||| ||||||||||||||||| |||| ||||| ||| |||||| ||||||||| Sbjct: 85164 gagtaggtgcgaattctcccaatttgtgacccaccatgcgatctgttataaaaataggta 85223 Query: 115 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 174 ||||||||||||||||||||| || ||||||||||| | ||||||||||| |||| ||| Sbjct: 85224 aatgttcctttccattatgaatagcgattgtatggccgatcattgtgggtataatggtag 85283 Query: 175 atgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatct 234 ||||||||||||| ||||||||||| ||||| ||||| |||| |||| ||| || || | Sbjct: 85284 atgcccgggaccaagttactattgtctctttttcctctctcatgttgagcttctcaattt 85343 Query: 235 ttgccaataaatgatgagctacaaaaggatt 265 ||||||||||||||| ||||||||||||||| Sbjct: 85344 ttgccaataaatgattagctacaaaaggatt 85374 Score = 161 bits (81), Expect = 4e-36 Identities = 81/81 (100%) Strand = Plus / Minus Query: 412 aggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggtt 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 aggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggtt 22 Query: 472 caattcccgtcgttcgcccat 492 ||||||||||||||||||||| Sbjct: 21 caattcccgtcgttcgcccat 1 Score = 139 bits (70), Expect = 1e-29 Identities = 79/82 (96%) Strand = Plus / Plus Query: 549 ttacggcgacgaagaataaaactatcgctatattttttccttttcctagttcttcttcca 608 |||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 85470 ttacggcgacgaagaataaaactatcactatatttattccttttcctacttcttcttcca 85529 Query: 609 agcgcaggataaccccaagggg 630 |||||||||||||||||||||| Sbjct: 85530 agcgcaggataaccccaagggg 85551
>gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1172 Score = 204 bits (103), Expect = 3e-49 Identities = 184/211 (87%) Strand = Plus / Plus Query: 55 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 114 |||||||| |||||||||||||||| |||||||||||| | |||||| |||||||||| Sbjct: 771 gagtaggcgcgaattctcccaatttatgacctaccatagaagctgttatataaataggta 830 Query: 115 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 174 ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 831 aatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 890 Query: 175 atgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatct 234 |||||| ||||| |||||||| |||||||||||||| |||| |||| ||||| || | Sbjct: 891 atgccctagaccaagttactataatttctttctcctccctcatgttgagtttttcaattt 950 Query: 235 ttgccaataaatgatgagctacaaaaggatt 265 || || ||||||||| ||||||||||||||| Sbjct: 951 ttcccgataaatgattagctacaaaaggatt 981 Score = 81.8 bits (41), Expect = 3e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggc 441 |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1128 tcctttagctagataaggggcggatgtagccaagtggatcaaggc 1172 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 316 tggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaataatga 375 |||||||||||||||||||||||||| ||||| | |||| |||||||||| |||||||| Sbjct: 1042 tggcattctatgtccaatatctcgatttaagtatgaaggtaagaataaatacaataatga 1101 Query: 376 t 376 | Sbjct: 1102 t 1102
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 202 bits (102), Expect = 1e-48 Identities = 105/106 (99%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25387 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 25446 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatcgcattattg 502 |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 25447 caccatgcgcgggttcaattcccgtcattcgcccatcgcattattg 25492 Score = 117 bits (59), Expect = 5e-23 Identities = 65/67 (97%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatcgaagtacggaggtcagaataaatagaa 369 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 25301 aaagagtggcattcgatgtccaatatctcgatcgaagtatggaggtcagaataaatagaa 25360 Query: 370 taatgat 376 ||||||| Sbjct: 25361 taatgat 25367
>gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1060 Score = 198 bits (100), Expect = 2e-47 Identities = 184/212 (86%) Strand = Plus / Plus Query: 54 cgagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggt 113 ||||||||| |||||||||||||||| ||||||||||| | |||||| ||||||||| Sbjct: 673 cgagtaggcgcgaattctcccaatttataacctaccatagcacctgttatataaataggt 732 Query: 114 atatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgcta 173 | ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| || Sbjct: 733 aaatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggta 792 Query: 174 gatgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatc 233 ||||||| ||||| |||||||| |||||||||||| | |||| |||| ||||| || Sbjct: 793 gatgccctagaccaagttactataatttctttctccttcctcatgttgagtttttccatt 852 Query: 234 tttgccaataaatgatgagctacaaaaggatt 265 ||| |||||||||||| ||||||||||||||| Sbjct: 853 tttcccaataaatgattagctacaaaaggatt 884 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 316 tggcattctatgtccaatatctcgat 341 |||||||||||||||||||||||||| Sbjct: 945 tggcattctatgtccaatatctcgat 970
>gb|DQ069469.1| Acorus americanus ribosomal protein S19 (rps19) gene, partial cds; chloroplast Length = 276 Score = 196 bits (99), Expect = 6e-47 Identities = 183/211 (86%) Strand = Plus / Minus Query: 55 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 114 ||||||| ||||||||||||||||| |||| |||||| ||| |||||| ||||| |||| Sbjct: 232 gagtaggtgcgaattctcccaatttgtgaccgaccatacgatctgttatataaatgggta 173 Query: 115 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 174 |||||||||||||||||||| ||||||||||| || | ||||||||||| |||| ||| Sbjct: 172 agtgttcctttccattatgaatagcaattgtatgaccgatcattgtgggtataatggtag 113 Query: 175 atgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatct 234 ||||||||||||| ||||||||| ||||||||||||| ||||| |||| ||| || || | Sbjct: 112 atgcccgggaccaagttactattatttctttctcctctttcatgttgagcttctcaattt 53 Query: 235 ttgccaataaatgatgagctacaaaaggatt 265 || |||||||||||| || ||||||||||| Sbjct: 52 tttccaataaatgattggccacaaaaggatt 22
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 196 bits (99), Expect = 6e-47 Identities = 183/211 (86%) Strand = Plus / Plus Query: 55 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 114 ||||||| ||||||||||||||||| |||| |||||| ||| |||||| ||||| |||| Sbjct: 83677 gagtaggtgcgaattctcccaatttgtgaccgaccatacgatctgttatataaatgggta 83736 Query: 115 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 174 |||||||||||||||||||| ||||||||||| || | ||||||||||| |||| ||| Sbjct: 83737 agtgttcctttccattatgaatagcaattgtatgaccgatcattgtgggtataatggtag 83796 Query: 175 atgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatct 234 ||||||||||||| ||||||||| ||||||||||||| ||||| |||| ||| || || | Sbjct: 83797 atgcccgggaccaagttactattatttctttctcctctttcatgttgagcttctcaattt 83856 Query: 235 ttgccaataaatgatgagctacaaaaggatt 265 || |||||||||||| || ||||||||||| Sbjct: 83857 tttccaataaatgattggccacaaaaggatt 83887 Score = 143 bits (72), Expect = 8e-31 Identities = 78/80 (97%) Strand = Plus / Plus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 84073 ggggcggatgtagccaagtggattaaggcagtggattgtgaatccaccacgcgcgggttc 84132 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 84133 aattcccgtcgttcgcccat 84152 Score = 137 bits (69), Expect = 5e-29 Identities = 75/77 (97%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 77 ggggcggatgtagccaagtggattaaggcagtggattgtgaatccaccacgcgcgggttc 18 Query: 473 aattcccgtcgttcgcc 489 ||||||||||||||||| Sbjct: 17 aattcccgtcgttcgcc 1 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Minus Query: 549 ttacggcgacgaagaataaaactatcgctatattttttccttttcctagttcttcttcca 608 |||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||| Sbjct: 153786 ttacggcgacgaagaataaaacgatcactatatttattccttttcctacttcttcttcca 153727 Query: 609 agcgcaggataaccccaagggg 630 |||||||| ||||||||||||| Sbjct: 153726 agcgcagggtaaccccaagggg 153705 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 549 ttacggcgacgaagaataaaactatcgctatattttttccttttcctagttcttcttcca 608 |||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||| Sbjct: 84185 ttacggcgacgaagaataaaacgatcactatatttattccttttcctacttcttcttcca 84244 Query: 609 agcgcaggataaccccaagggg 630 |||||||| ||||||||||||| Sbjct: 84245 agcgcagggtaaccccaagggg 84266 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 200 ttctttctcctccttcatattgaccttttctatctttgccaataaatgatgagctacaaa 259 |||||||||||| ||||| |||| ||| || || ||| |||||||||||| || ||||| Sbjct: 328 ttctttctcctctttcatgttgagcttctcaattttttccaataaatgattggccacaaa 269 Query: 260 aggatt 265 |||||| Sbjct: 268 aggatt 263
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 188 bits (95), Expect = 2e-44 Identities = 182/211 (86%) Strand = Plus / Minus Query: 55 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 114 ||||||| ||||||||||||||||| |||| |||||| ||| ||| || |||||||||| Sbjct: 148635 gagtaggtgcgaattctcccaatttgtgaccgaccatacgatctgtgatataaataggta 148576 Query: 115 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 174 ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 148575 aatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 148516 Query: 175 atgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatct 234 ||||||| ||||| || ||||| |||||||||||||| || | |||| ||||| || Sbjct: 148515 atgcccgagaccaagtcactatgatttctttctcctccctcctgttgagtttttcaattc 148456 Query: 235 ttgccaataaatgatgagctacaaaaggatt 265 || |||||||||||| ||||||||||||||| Sbjct: 148455 ttcccaataaatgattagctacaaaaggatt 148425 Score = 188 bits (95), Expect = 2e-44 Identities = 122/131 (93%) Strand = Plus / Minus Query: 411 aaggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggt 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148285 aaggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggt 148226 Query: 471 tcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaatgcaattttccatat 530 ||||||||||||||||||||||| ||||||| | ||||||||| || | |||||| || | Sbjct: 148225 tcaattcccgtcgttcgcccatcacattatttccaattccaaagattcgattttcaatgt 148166 Query: 531 tcctagttacg 541 ||||| ||||| Sbjct: 148165 tcctatttacg 148155 Score = 188 bits (95), Expect = 2e-44 Identities = 122/131 (93%) Strand = Plus / Plus Query: 411 aaggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggt 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86637 aaggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggt 86696 Query: 471 tcaattcccgtcgttcgcccatcgcattattgcaaattccaaaaatgcaattttccatat 530 ||||||||||||||||||||||| ||||||| | ||||||||| || | |||||| || | Sbjct: 86697 tcaattcccgtcgttcgcccatcacattatttccaattccaaagattcgattttcaatgt 86756 Query: 531 tcctagttacg 541 ||||| ||||| Sbjct: 86757 tcctatttacg 86767 Score = 188 bits (95), Expect = 2e-44 Identities = 182/211 (86%) Strand = Plus / Plus Query: 55 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 114 ||||||| ||||||||||||||||| |||| |||||| ||| ||| || |||||||||| Sbjct: 86287 gagtaggtgcgaattctcccaatttgtgaccgaccatacgatctgtgatataaataggta 86346 Query: 115 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 174 ||||||||||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 86347 aatgttcctttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 86406 Query: 175 atgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatct 234 ||||||| ||||| || ||||| |||||||||||||| || | |||| ||||| || Sbjct: 86407 atgcccgagaccaagtcactatgatttctttctcctccctcctgttgagtttttcaattc 86466 Query: 235 ttgccaataaatgatgagctacaaaaggatt 265 || |||||||||||| ||||||||||||||| Sbjct: 86467 ttcccaataaatgattagctacaaaaggatt 86497 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Minus Query: 549 ttacggcgacgaagaataaaactatcgctatattttttccttttcctagttcttcttcca 608 ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 148159 ttacggcgacgaagaatcaaactatcactatatttgttccttttcctgcttcttcttcca 148100 Query: 609 agcgcaggataaccccaagggg 630 |||||||||||||||||||||| Sbjct: 148099 agcgcaggataaccccaagggg 148078 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 549 ttacggcgacgaagaataaaactatcgctatattttttccttttcctagttcttcttcca 608 ||||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 86763 ttacggcgacgaagaatcaaactatcactatatttgttccttttcctgcttcttcttcca 86822 Query: 609 agcgcaggataaccccaagggg 630 |||||||||||||||||||||| Sbjct: 86823 agcgcaggataaccccaagggg 86844 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 316 tggcattctatgtccaatatctcgatc 342 ||||||||||||||||||||||||||| Sbjct: 148370 tggcattctatgtccaatatctcgatc 148344 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 316 tggcattctatgtccaatatctcgatc 342 ||||||||||||||||||||||||||| Sbjct: 86552 tggcattctatgtccaatatctcgatc 86578
>gb|DQ191749.1| Dioscorea zingiberensis clone 2 from Baoshan Yunnan Province psbA-trnH intergenic spacer, complete sequence; chloroplast Length = 503 Score = 182 bits (92), Expect = 1e-42 Identities = 173/200 (86%) Strand = Plus / Plus Query: 66 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 125 ||||||||||||||| |||||||||| ||| |||||| |||||||| | |||||| ||| Sbjct: 143 aattctcccaatttgtgacctaccatttgatctgttatataaatagggaaatgttctttt 202 Query: 126 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccgggac 185 ||||||||||| || |||||||| |||| ||||| ||||| |||| ||||| |||| ||| Sbjct: 203 ccattatgaatggcgattgtatgtccaatcattgcgggtataatggtagatccccgagac 262 Query: 186 cacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaataaa 245 || ||||||||| |||||||||||||| ||||||||| ||||| || ||| || ||||| Sbjct: 263 caagttactattatttctttctcctccctcatattgagtttttccatttttcccgataaa 322 Query: 246 tgatgagctacaaaaggatt 265 |||| ||||||||||||||| Sbjct: 323 tgattagctacaaaaggatt 342 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatc 342 ||||| ||||||||||||| ||||||||||||| Sbjct: 398 aaagattggcattctatgttcaatatctcgatc 430
>gb|DQ191747.1| Dioscorea zingiberensis clone 2 from Hunan Province psbA-trnH intergenic spacer, complete sequence; chloroplast Length = 503 Score = 182 bits (92), Expect = 1e-42 Identities = 173/200 (86%) Strand = Plus / Plus Query: 66 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 125 ||||||||||||||| |||||||||| ||| |||||| |||||||| | |||||| ||| Sbjct: 143 aattctcccaatttgtgacctaccatttgatctgttatataaatagggaaatgttctttt 202 Query: 126 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccgggac 185 ||||||||||| || |||||||| |||| ||||| ||||| |||| ||||| |||| ||| Sbjct: 203 ccattatgaatggcgattgtatgtccaatcattgcgggtataatggtagatccccgagac 262 Query: 186 cacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaataaa 245 || ||||||||| |||||||||||||| ||||||||| ||||| || ||| || ||||| Sbjct: 263 caagttactattatttctttctcctccctcatattgagtttttccatttttcccgataaa 322 Query: 246 tgatgagctacaaaaggatt 265 |||| ||||||||||||||| Sbjct: 323 tgattagctacaaaaggatt 342 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatc 342 ||||| ||||||||||||| ||||||||||||| Sbjct: 398 aaagattggcattctatgttcaatatctcgatc 430
>gb|DQ131105.1| Dioscorea zingiberensis psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 503 Score = 182 bits (92), Expect = 1e-42 Identities = 173/200 (86%) Strand = Plus / Plus Query: 66 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 125 ||||||||||||||| |||||||||| ||| |||||| |||||||| | |||||| ||| Sbjct: 143 aattctcccaatttgtgacctaccatttgatctgttatataaatagggaaatgttctttt 202 Query: 126 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccgggac 185 ||||||||||| || |||||||| |||| ||||| ||||| |||| ||||| |||| ||| Sbjct: 203 ccattatgaatggcgattgtatgtccaatcattgcgggtataatggtagatccccgagac 262 Query: 186 cacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaataaa 245 || ||||||||| |||||||||||||| ||||||||| ||||| || ||| || ||||| Sbjct: 263 caagttactattatttctttctcctccctcatattgagtttttccatttttcccgataaa 322 Query: 246 tgatgagctacaaaaggatt 265 |||| ||||||||||||||| Sbjct: 323 tgattagctacaaaaggatt 342 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 310 aaagagtggcattctatgtccaatatctcgatc 342 ||||| ||||||||||||| ||||||||||||| Sbjct: 398 aaagattggcattctatgttcaatatctcgatc 430
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007B15 map S10318, complete sequence Length = 125243 Score = 176 bits (89), Expect = 6e-41 Identities = 95/97 (97%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct: 74626 tcctttagctggataagggacggatgtagccaagttgatcaaggcagtggattgtgaatc 74685 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatc 493 ||||||||||||||||||||||||||||||||||||| Sbjct: 74686 caccatgcgcgggttcaattcccgtcgttcgcccatc 74722
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 176 bits (89), Expect = 6e-41 Identities = 95/97 (97%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct: 3480671 tcctttagctggataagggacggatgtagccaagttgatcaaggcagtggattgtgaatc 3480730 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatc 493 ||||||||||||||||||||||||||||||||||||| Sbjct: 3480731 caccatgcgcgggttcaattcccgtcgttcgcccatc 3480767 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 29 tgcattttcataactcgtaaaatgccgagt 58 |||| ||||||||||||||||||||||||| Sbjct: 22627420 tgcactttcataactcgtaaaatgccgagt 22627391 Score = 44.1 bits (22), Expect = 0.57 Identities = 62/74 (83%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 442 agtggattgtgaatccaccatgcgcgggttcaattcccgtcgttcgcccatcgcattatt 501 |||||||||||||| || ||||| | |||||||| ||| ||||| |||||| |||||| Sbjct: 8475925 agtggattgtgaattca-catgcacaggttcaatacccatcgtttgcccattccattatc 8475983 Query: 502 gcaaattccaaaaa 515 || |||||||||| Sbjct: 8475984 acatattccaaaaa 8475997 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 442 agtggattgtgaatccaccatgcgcgggttcaat 475 ||||||||||||||| ||||||| | |||||||| Sbjct: 8443504 agtggattgtgaatcgaccatgcacaggttcaat 8443537
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 176 bits (89), Expect = 6e-41 Identities = 95/97 (97%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggcagtggattgtgaatc 456 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct: 3489375 tcctttagctggataagggacggatgtagccaagttgatcaaggcagtggattgtgaatc 3489434 Query: 457 caccatgcgcgggttcaattcccgtcgttcgcccatc 493 ||||||||||||||||||||||||||||||||||||| Sbjct: 3489435 caccatgcgcgggttcaattcccgtcgttcgcccatc 3489471 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 29 tgcattttcataactcgtaaaatgccgagt 58 |||| ||||||||||||||||||||||||| Sbjct: 22937331 tgcactttcataactcgtaaaatgccgagt 22937302 Score = 44.1 bits (22), Expect = 0.57 Identities = 62/74 (83%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 442 agtggattgtgaatccaccatgcgcgggttcaattcccgtcgttcgcccatcgcattatt 501 |||||||||||||| || ||||| | |||||||| ||| ||||| |||||| |||||| Sbjct: 8546688 agtggattgtgaattca-catgcacaggttcaatacccatcgtttgcccattccattatc 8546746 Query: 502 gcaaattccaaaaa 515 || |||||||||| Sbjct: 8546747 acatattccaaaaa 8546760 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 442 agtggattgtgaatccaccatgcgcgggttcaat 475 ||||||||||||||| ||||||| | |||||||| Sbjct: 8514267 agtggattgtgaatcgaccatgcacaggttcaat 8514300
>gb|AY757822.1| Acorus gramineus Rps19 (rps19) gene, partial cds; chloroplast Length = 228 Score = 174 bits (88), Expect = 2e-40 Identities = 148/168 (88%) Strand = Plus / Minus Query: 55 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 114 ||||||| ||||||||||||||||| |||| |||||| ||| |||||| ||||| |||| Sbjct: 181 gagtaggtgcgaattctcccaatttgtgaccgaccatacgatctgttatataaatgggta 122 Query: 115 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 174 |||||||||||||||||||| ||||||||||| || | ||||||||||| |||| ||| Sbjct: 121 agtgttcctttccattatgaatagcaattgtatgaccgatcattgtgggtataatggtag 62 Query: 175 atgcccgggaccacgttactattgtttctttctcctccttcatattga 222 ||||||||||||| ||||||||| ||||||||||||| ||||| |||| Sbjct: 61 atgcccgggaccaagttactattatttctttctcctctttcatgttga 14
>gb|DQ069472.1| Ranunculus macranthus ribosomal protein S19 (rps19) gene, partial cds; chloroplast Length = 276 Score = 174 bits (88), Expect = 2e-40 Identities = 172/200 (86%) Strand = Plus / Minus Query: 66 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 125 ||||||||||||||| ||||||||||| ||| ||||| |||||||||| |||||| ||| Sbjct: 221 aattctcccaatttgtgacctaccatacgatcggttatataaataggtaaatgttctttt 162 Query: 126 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccgggac 185 |||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| Sbjct: 161 ccattatgaatcgcaattgtatggccaatcattgtgggtataatggtagatgcccgggac 102 Query: 186 cacgttactattgtttctttctcctccttcatattgaccttttctatctttgccaataaa 245 || ||||| ||||| ||||| || || |||| || | ||| || ||| ||||||| Sbjct: 101 caagttacgattgtatctttttctgccctcatgtttagcttcgtaatttttatcaataaa 42 Query: 246 tgatgagctacaaaaggatt 265 |||| ||||||||||||||| Sbjct: 41 tgattagctacaaaaggatt 22
>gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trnH intergenic spacer and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 770 Score = 174 bits (88), Expect = 2e-40 Identities = 178/208 (85%) Strand = Plus / Plus Query: 55 gagtaggcacgaattctcccaatttgcgacctaccataggatttgttatgtaaataggta 114 ||||||| ||||||| ||||||||| |||| |||||| ||| |||||| |||||||||| Sbjct: 386 gagtaggtgcgaattcccccaatttgtgacccaccatacgatctgttatataaataggta 445 Query: 115 tatgttcctttccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctag 174 |||||| |||||||||||||| || ||||||||||||| ||||||||||| |||| ||| Sbjct: 446 aatgttcttttccattatgaatagcgattgtatggccaatcattgtgggtataatggtag 505 Query: 175 atgcccgggaccacgttactattgtttctttctcctccttcatattgaccttttctatct 234 ||||||| ||||| |||| ||| |||||||||||||| |||| |||| ||||| || | Sbjct: 506 atgcccgagaccaagttagaattatttctttctcctccctcatgttgagtttttcaattt 565 Query: 235 ttgccaataaatgatgagctacaaaagg 262 || | ||||||||| |||||||||||| Sbjct: 566 ttctcgataaatgattagctacaaaagg 593 Score = 73.8 bits (37), Expect = 6e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 397 tcctttagctggataaggggcggatgtagccaagtggatcaaggc 441 |||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 726 tcctttagctagatagggggcggatgtagccaagtggatcaaggc 770 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 316 tggcattctatgtccaatatctcgatcgaagt 347 ||||||||||||||||||||||||||| |||| Sbjct: 641 tggcattctatgtccaatatctcgatctaagt 672 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 6 cgacgagatttagtatcctttcttgcat 33 |||||||||||| |||| |||||||||| Sbjct: 343 cgacgagatttattatcgtttcttgcat 370
>ref|XM_472842.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 163 bits (82), Expect = 9e-37 Identities = 85/86 (98%) Strand = Plus / Minus Query: 545 ttacttacggcgacgaagaataaaactatcgctatattttttccttttcctagttcttct 604 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 822 ttacttacggcgacgaagaataaaactatcactatattttttccttttcctagttcttct 763 Query: 605 tccaagcgcaggataaccccaagggg 630 |||||||||||||||||||||||||| Sbjct: 762 tccaagcgcaggataaccccaagggg 737
>emb|X60428.1|CPHAPSBA H.annuus chloroplast psbA and trnH genes Length = 1047 Score = 161 bits (81), Expect = 4e-36 Identities = 81/81 (100%) Strand = Plus / Plus Query: 412 aggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggtt 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 aggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggtt 988 Query: 472 caattcccgtcgttcgcccat 492 ||||||||||||||||||||| Sbjct: 989 caattcccgtcgttcgcccat 1009
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 161 bits (81), Expect = 4e-36 Identities = 81/81 (100%) Strand = Plus / Minus Query: 412 aggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggtt 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359743 aggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggtt 359684 Query: 472 caattcccgtcgttcgcccat 492 ||||||||||||||||||||| Sbjct: 359683 caattcccgtcgttcgcccat 359663
>gb|AY829642.1| Eucalyptus globulus haplotype ET21 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 464 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 137 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 136 aattcccgtcgttcgcccat 117
>gb|AY829641.1| Eucalyptus globulus haplotype ET20 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 456 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 117 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 116 aattcccgtcgttcgcccat 97
>gb|AY829640.1| Eucalyptus globulus haplotype ET1 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 580 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 117 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 116 aattcccgtcgttcgcccat 97
>gb|AY620902.1| Eucalyptus globulus haplotype S97 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 543 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620901.1| Eucalyptus globulus haplotype S94 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 544 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620900.1| Eucalyptus globulus haplotype S81 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 544 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620899.1| Eucalyptus globulus haplotype S78 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 545 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620898.1| Eucalyptus globulus haplotype S76 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 514 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620896.1| Eucalyptus globulus haplotype CC56 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 537 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 68 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 67 aattcccgtcgttcgcccat 48
>gb|AY620895.1| Eucalyptus viminalis haplotype S98 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 541 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620894.1| Eucalyptus viminalis haplotype S93 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 566 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620893.1| Eucalyptus viminalis haplotype S92 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 542 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620892.1| Eucalyptus viminalis haplotype S91 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 542 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620891.1| Eucalyptus viminalis haplotype S90 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 542 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620890.1| Eucalyptus viminalis haplotype S79 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 583 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 79 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 78 aattcccgtcgttcgcccat 59
>gb|AY620889.1| Eucalyptus dalrympleana haplotype S69 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 537 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620888.1| Eucalyptus viminalis haplotype S38 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 542 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620887.1| Eucalyptus viminalis haplotype CC53 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 563 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 68 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 67 aattcccgtcgttcgcccat 48
>gb|AY620886.1| Eucalyptus cordata haplotype S101 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 544 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620885.1| Eucalyptus cordata haplotype S100 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 515 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620884.1| Eucalyptus cordata haplotype S99 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 572 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620883.1| Eucalyptus cordata haplotype S96 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 511 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620882.1| Eucalyptus cordata haplotype S95 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 543 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620881.1| Eucalyptus cordata haplotype S89 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 543 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620880.1| Eucalyptus cordata haplotype S88 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 518 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620879.1| Eucalyptus cordata haplotype S83 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 514 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620878.1| Eucalyptus cordata haplotype S80 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 537 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620877.1| Eucalyptus cordata haplotype S77 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 513 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620876.1| Eucalyptus cordata haplotype S73 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 566 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620875.1| Eucalyptus cordata haplotype S71 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 515 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620874.1| Eucalyptus cordata haplotype S58 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 513 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620873.1| Eucalyptus cordata haplotype S54 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 566 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620872.1| Eucalyptus cordata haplotype S53 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 566 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620870.1| Eucalyptus cordata haplotype S47 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 487 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620869.1| Eucalyptus cordata haplotype S43 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 514 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY620868.1| Eucalyptus cordata haplotype S41 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 543 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 62 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 61 aattcccgtcgttcgcccat 42
>gb|AY640051.1| Eucalyptus morrisbyi haplotype Cc56 rpl2-trnH intergenic spacer, partial sequence; tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 550 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 73 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 72 aattcccgtcgttcgcccat 53
>gb|AY640050.1| Eucalyptus morrisbyi haplotype S87 ribosomal protein S12 (rp12) gene, partial sequence; rpl2-trnH intergenic spacer and tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 570 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 81 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 80 aattcccgtcgttcgcccat 61
>gb|AY640049.1| Eucalyptus morrisbyi haplotype S83 ribosomal protein S12 (rp12) gene, partial sequence; rpl2-trnH intergenic spacer and tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 549 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 81 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 80 aattcccgtcgttcgcccat 61
>gb|AY640048.1| Eucalyptus morrisbyi haplotype S82 ribosomal protein S12 (rp12) gene, partial sequence; and rpl2-trnH intergenic spacer and tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 573 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 89 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 88 aattcccgtcgttcgcccat 69
>gb|AY640047.1| Eucalyptus morrisbyi haplotype S81 ribosomal protein S12 (rp12) gene, partial sequence; rpl2-trnH intergenic spacer and tRNA-His (trnH) gene, complete sequence; and trnH-psbA intergenic spacer, partial sequence; chloroplast Length = 598 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 81 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 80 aattcccgtcgttcgcccat 61
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 412 aggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggtt 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91 aggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggtt 32 Query: 472 caattcccgtcgttcgccca 491 |||||||||||||||||||| Sbjct: 31 caattcccgtcgttcgccca 12 Score = 151 bits (76), Expect = 3e-33 Identities = 124/140 (88%) Strand = Plus / Plus Query: 66 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 125 ||||||||||||||| | ||||||||| ||| |||||| |||||||||| |||||||||| Sbjct: 83945 aattctcccaatttgtgtcctaccatacgatctgttatataaataggtaaatgttccttt 84004 Query: 126 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccgggac 185 |||||||| || ||||| |||||||| |||||| |||||| |||| |||||||||||||| Sbjct: 84005 ccattatggatagcaatagtatggccgaccattatgggtataatggtagatgcccgggac 84064 Query: 186 cacgttactattgtttcttt 205 || |||| |||| ||||||| Sbjct: 84065 caggttattattatttcttt 84084 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 550 tacggcgacgaagaataaaactatcgctatattttttccttttcctagttcttcttccaa 609 |||||||||||||||| ||| |||| |||||||| |||||||| ||| ||||| |||||| Sbjct: 152647 tacggcgacgaagaatcaaattatcactatatttattcctttttctacttctttttccaa 152588 Query: 610 gcgcaggataaccccaagggg 630 | ||||||||||||||||||| Sbjct: 152587 gtgcaggataaccccaagggg 152567 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 550 tacggcgacgaagaataaaactatcgctatattttttccttttcctagttcttcttccaa 609 |||||||||||||||| ||| |||| |||||||| |||||||| ||| ||||| |||||| Sbjct: 84231 tacggcgacgaagaatcaaattatcactatatttattcctttttctacttctttttccaa 84290 Query: 610 gcgcaggataaccccaagggg 630 | ||||||||||||||||||| Sbjct: 84291 gtgcaggataaccccaagggg 84311
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 159 bits (80), Expect = 1e-35 Identities = 80/80 (100%) Strand = Plus / Minus Query: 413 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 ggggcggatgtagccaagtggatcaaggcagtggattgtgaatccaccatgcgcgggttc 23 Query: 473 aattcccgtcgttcgcccat 492 |||||||||||||||||||| Sbjct: 22 aattcccgtcgttcgcccat 3 Score = 111 bits (56), Expect = 3e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 66 aattctcccaatttgcgacctaccataggatttgttatgtaaataggtatatgttccttt 125 ||||||||||||||| | ||||||||| || ||||| |||||||| | ||| || ||| Sbjct: 86462 aattctcccaatttgtggcctaccatactatccgttatataaataggcaaatgctctttt 86521 Query: 126 ccattatgaatcgcaattgtatggccaaccattgtgggtagaatgctagatgcccgggac 185 |||||||| || ||||| ||||| || | ||||||||||| |||| |||||||||||||| Sbjct: 86522 ccattatggatagcaatcgtatgaccgatcattgtgggtataatggtagatgcccgggac 86581 Query: 186 cacgttactattgtttcttt 205 || ||||||||| ||||||| Sbjct: 86582 caagttactattatttcttt 86601 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 550 tacggcgacgaagaataaaactatcgctatattttttccttttcctagttcttcttccaa 609 |||||||||||||||| ||| |||| |||||||| |||||||| ||| |||||||||||| Sbjct: 155879 tacggcgacgaagaatcaaattatcactatatttattcctttttctacttcttcttccaa 155820 Query: 610 gcgcaggataaccccaagggg 630 | ||||||||||||||||||| Sbjct: 155819 gtgcaggataaccccaagggg 155799 Score = 105 bits (53), Expect = 2e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 550 tacggcgacgaagaataaaactatcgctatattttttccttttcctagttcttcttccaa 609 |||||||||||||||| ||| |||| |||||||| |||||||| ||| |||||||||||| Sbjct: 86751 tacggcgacgaagaatcaaattatcactatatttattcctttttctacttcttcttccaa 86810 Query: 610 gcgcaggataaccccaagggg 630 | ||||||||||||||||||| Sbjct: 86811 gtgcaggataaccccaagggg 86831 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,989,700 Number of Sequences: 3902068 Number of extensions: 5989700 Number of successful extensions: 138419 Number of sequences better than 10.0: 2550 Number of HSP's better than 10.0 without gapping: 2545 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 132179 Number of HSP's gapped (non-prelim): 5856 length of query: 647 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 624 effective length of database: 17,143,297,704 effective search space: 10697417767296 effective search space used: 10697417767296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
