Clone Name | rbasd19n18 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C07, full insert sequence Length = 833 Score = 379 bits (191), Expect = e-102 Identities = 350/403 (86%) Strand = Plus / Minus Query: 259 actccgctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgc 318 ||||| ||||||||| |||||||||||||| ||||| | |||||| ||||| | | ||| Sbjct: 511 actcctctagaagaacgtcccttctggaggttgcaccaacttgcgattctgcggggttgc 452 Query: 319 catgtctttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgc 378 ||| || ||||| |||||||| | || | |||||| |||||||| |||||||||||||| Sbjct: 451 catctccttcttgagctgggtaaggatagtctccatggtgtactcgcgctgccagtttgc 392 Query: 379 tagcacactgaacttcttcgggtcaaccgccccggtctcgtgattaacacaagccatgtt 438 ||| |||| |||||| ||| ||||||||| || ||||| ||||||||||| | ||| || Sbjct: 391 tagaacaccaaacttcctcgagtcaaccgctccagtctcatgattaacacacgacatatt 332 Query: 439 gattcttgaatggaatctaacagatggtgccttctcagggtagtccttgtcacaaaacag 498 |||||||||||| || | |||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 331 gattcttgaatgaaaccggacagatggtggcttctctgggtagtccttgtcacagaacag 272 Query: 499 cttcagctggtagatgcgaccctcatggacagtattgtgaggaccaataatggtgccagt 558 ||||||||||||||||||||| ||||||||| |||| || |||||||| ||||||||||| Sbjct: 271 cttcagctggtagatgcgaccttcatggacactattatgtggaccaatgatggtgccagt 212 Query: 559 ccatgaccgcatgtatatgtcatcagcatcatccattccatagctgacagttccatctcc 618 ||| ||||||||||| |||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 211 ccaagaccgcatgtagatgtcatctgcatcatccattccatagctcacggttccatctcc 152 Query: 619 aatgcccttctccccgcgctcaagctcttctagcagcctgaag 661 ||||||||| || || || |||||||||||||||| ||||||| Sbjct: 151 aatgcccttttcaccacgttcaagctcttctagcaacctgaag 109
>dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054B21, full insert sequence Length = 853 Score = 379 bits (191), Expect = e-102 Identities = 350/403 (86%) Strand = Plus / Minus Query: 259 actccgctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgc 318 ||||| ||||||||| |||||||||||||| ||||| | |||||| ||||| | | ||| Sbjct: 562 actcctctagaagaacgtcccttctggaggttgcaccaacttgcgattctgcggggttgc 503 Query: 319 catgtctttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgc 378 ||| || ||||| |||||||| | || | |||||| |||||||| |||||||||||||| Sbjct: 502 catctccttcttgagctgggtaaggatagtctccatggtgtactcgcgctgccagtttgc 443 Query: 379 tagcacactgaacttcttcgggtcaaccgccccggtctcgtgattaacacaagccatgtt 438 ||| |||| |||||| ||| ||||||||| || ||||| ||||||||||| | ||| || Sbjct: 442 tagaacaccaaacttcctcgagtcaaccgctccagtctcatgattaacacacgacatatt 383 Query: 439 gattcttgaatggaatctaacagatggtgccttctcagggtagtccttgtcacaaaacag 498 |||||||||||| || | |||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 382 gattcttgaatgaaaccggacagatggtggcttctctgggtagtccttgtcacagaacag 323 Query: 499 cttcagctggtagatgcgaccctcatggacagtattgtgaggaccaataatggtgccagt 558 ||||||||||||||||||||| ||||||||| |||| || |||||||| ||||||||||| Sbjct: 322 cttcagctggtagatgcgaccttcatggacactattatgtggaccaatgatggtgccagt 263 Query: 559 ccatgaccgcatgtatatgtcatcagcatcatccattccatagctgacagttccatctcc 618 ||| ||||||||||| |||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 262 ccaagaccgcatgtagatgtcatctgcatcatccattccatagctcacggttccatctcc 203 Query: 619 aatgcccttctccccgcgctcaagctcttctagcagcctgaag 661 ||||||||| || || || |||||||||||||||| ||||||| Sbjct: 202 aatgcccttttcaccacgttcaagctcttctagcaacctgaag 160
>gb|AY104181.1| Zea mays PCO060230 mRNA sequence Length = 1061 Score = 375 bits (189), Expect = e-100 Identities = 351/405 (86%) Strand = Plus / Minus Query: 257 acactccgctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgct 316 ||||| || ||||||||||||||||||||||||||||||| ||| || ||||| | || Sbjct: 720 acacttcgttagaagaatgtcccttctggaggctgcactaactttcgattctgcgaggca 661 Query: 317 gccatgtctttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagttt 376 ||||| |||||||| |||||||| | || | |||||| ||||| || ||||||||||| Sbjct: 660 gccatctctttcttgagctgggtgaggatgttctccatcgtgtagtcccgctgccagttc 601 Query: 377 gctagcacactgaacttcttcgggtcaaccgccccggtctcgtgattaacacaagccatg 436 ||||||| || |||||| | || |||||| || |||||||||||||| || | |||| Sbjct: 600 gctagcaaaccaaacttccttggatcaaccattcctgtctcgtgattaacgcatgtcatg 541 Query: 437 ttgattcttgaatggaatctaacagatggtgccttctcagggtagtccttgtcacaaaac 496 ||||||||||| |||||||| |||||||||| |||||| || |||||||||||||||||| Sbjct: 540 ttgattcttgagtggaatctgacagatggtggcttctccggatagtccttgtcacaaaac 481 Query: 497 agcttcagctggtagatgcgaccctcatggacagtattgtgaggaccaataatggtgcca 556 | ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||| Sbjct: 480 aacttcagctggtagatgcgaccctcatgtacagtattgtgagggccaatgatggtacca 421 Query: 557 gtccatgaccgcatgtatatgtcatcagcatcatccattccatagctgacagttccatct 616 ||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||| Sbjct: 420 gtccatgaccgcatgtagatgtcatcagcatcatccattccatagctcactgtcccatca 361 Query: 617 ccaatgcccttctccccgcgctcaagctcttctagcagcctgaag 661 |||||||||||||| || ||||| ||||| |||| ||||||||| Sbjct: 360 ccaatgcccttctctccacgctcgagctcctctaatagcctgaag 316
>gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence Length = 822 Score = 367 bits (185), Expect = 3e-98 Identities = 350/405 (86%) Strand = Plus / Minus Query: 257 acactccgctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgct 316 ||||| || ||||||||||||||||||||||||||||||| ||| || ||||| | || Sbjct: 601 acacttcgttagaagaatgtcccttctggaggctgcactaactttcgattctgcgaggca 542 Query: 317 gccatgtctttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagttt 376 ||||| |||||||| |||||||| | || | |||||| ||||| || ||||||||||| Sbjct: 541 gccatctctttcttgagctgggttaggatgttctccatcgtgtagtcccgctgccagttc 482 Query: 377 gctagcacactgaacttcttcgggtcaaccgccccggtctcgtgattaacacaagccatg 436 ||||||| || |||||| | || |||||| || |||||||||||||| || | |||| Sbjct: 481 gctagcaaaccaaacttccttggatcaaccattcctgtctcgtgattaacgcatgtcatg 422 Query: 437 ttgattcttgaatggaatctaacagatggtgccttctcagggtagtccttgtcacaaaac 496 ||||||||||| |||||||| |||||||||| |||||| || ||||| |||||||||||| Sbjct: 421 ttgattcttgagtggaatctgacagatggtggcttctccggatagtctttgtcacaaaac 362 Query: 497 agcttcagctggtagatgcgaccctcatggacagtattgtgaggaccaataatggtgcca 556 | ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||| Sbjct: 361 aacttcagctggtagatgcgaccctcatgtacagtattgtgagggccaatgatggtacca 302 Query: 557 gtccatgaccgcatgtatatgtcatcagcatcatccattccatagctgacagttccatct 616 ||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||| Sbjct: 301 gtccatgaccgcatgtagatgtcatcagcatcatccattccatagctcactgtcccatca 242 Query: 617 ccaatgcccttctccccgcgctcaagctcttctagcagcctgaag 661 |||||||||||||| || ||||| ||||| |||| ||||||||| Sbjct: 241 ccaatgcccttctctccacgctcgagctcctctaatagcctgaag 197
>gb|AY103581.1| Zea mays PCO136340 mRNA sequence Length = 1242 Score = 341 bits (172), Expect = 2e-90 Identities = 340/396 (85%) Strand = Plus / Minus Query: 266 tagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgccatgtct 325 ||||||||||||||||| |||||||| ||||||||||||||||| | || || ||| ||| Sbjct: 605 tagaagaatgtcccttccggaggctgaactagcttgcggttctgtggcgatgtcatctct 546 Query: 326 ttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgctagcaca 385 ||||| || ||||| | || | ||||||| ||| || ||||||||||| | || || Sbjct: 545 ttcttgagatgggttaggatgtattccattgagtaatcacgctgccagttacccagaacg 486 Query: 386 ctgaacttcttcgggtcaaccgccccggtctcgtgattaacacaagccatgttgattctt 445 ||||||||||||||||||||| | || || || |||||||| || | | ||| |||||| Sbjct: 485 ctgaacttcttcgggtcaaccactccagtttcatgattaacgcatgttaagtttattctt 426 Query: 446 gaatggaatctaacagatggtgccttctcagggtagtccttgtcacaaaacagcttcagc 505 ||||| |||| ||| ||||||| ||||||||||||||||||||| || |||| ||||||| Sbjct: 425 gaatgaaatcgaactgatggtggcttctcagggtagtccttgtcgcagaacaacttcagc 366 Query: 506 tggtagatgcgaccctcatggacagtattgtgaggaccaataatggtgccagtccatgac 565 ||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 365 tggtagatgcgaccctcatggacggtattatgagggccaataatagtgccagtccatgat 306 Query: 566 cgcatgtatatgtcatcagcatcatccattccatagctgacagttccatctccaatgccc 625 |||||||| |||||||| || ||||||||||||||||| || || ||||||||||||||| Sbjct: 305 cgcatgtagatgtcatctgcgtcatccattccatagctcactgtcccatctccaatgccc 246 Query: 626 ttctccccgcgctcaagctcttctagcagcctgaag 661 ||||| || || |||||||||||||| ||||||||| Sbjct: 245 ttctctccacgttcaagctcttctaggagcctgaag 210
>gb|BT016303.1| Zea mays clone Contig136 mRNA sequence Length = 790 Score = 333 bits (168), Expect = 4e-88 Identities = 339/396 (85%) Strand = Plus / Minus Query: 266 tagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgccatgtct 325 ||||||||||||||||| |||||||| ||||||||||||||||| | || || ||| ||| Sbjct: 519 tagaagaatgtcccttccggaggctgaactagcttgcggttctgtggcgatgtcatctct 460 Query: 326 ttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgctagcaca 385 ||||| || ||||| | || | ||||||| || || ||||||||||| | || || Sbjct: 459 ttcttgagatgggttaggatgtattccattgaataatcacgctgccagttacccagaacg 400 Query: 386 ctgaacttcttcgggtcaaccgccccggtctcgtgattaacacaagccatgttgattctt 445 ||||||||||||||||||||| | || || || |||||||| || | | ||| |||||| Sbjct: 399 ctgaacttcttcgggtcaaccactccagtttcatgattaacgcatgttaagtttattctt 340 Query: 446 gaatggaatctaacagatggtgccttctcagggtagtccttgtcacaaaacagcttcagc 505 ||||| |||| ||| ||||||| ||||||||||||||||||||| || |||| ||||||| Sbjct: 339 gaatgaaatcgaactgatggtggcttctcagggtagtccttgtcgcagaacaacttcagc 280 Query: 506 tggtagatgcgaccctcatggacagtattgtgaggaccaataatggtgccagtccatgac 565 ||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 279 tggtagatgcgaccctcatggacggtattatgagggccaataatagtgccagtccatgat 220 Query: 566 cgcatgtatatgtcatcagcatcatccattccatagctgacagttccatctccaatgccc 625 |||||||| |||||||| || ||||||||||||||||| || || ||||||||||||||| Sbjct: 219 cgcatgtagatgtcatctgcgtcatccattccatagctcactgtcccatctccaatgccc 160 Query: 626 ttctccccgcgctcaagctcttctagcagcctgaag 661 ||||| || || |||||||||||||| ||||||||| Sbjct: 159 ttctctccacgttcaagctcttctaggagcctgaag 124
>dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B07, full insert sequence Length = 924 Score = 224 bits (113), Expect = 3e-55 Identities = 326/397 (82%) Strand = Plus / Minus Query: 265 ctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgccatgtc 324 ||||||||||||||| ||||||||||||||||| || ||||| || | |||||||| || Sbjct: 642 ctagaagaatgtcccctctggaggctgcactagtttccggttgtgtgatgctgccatctc 583 Query: 325 tttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgctagcac 384 |||||| || |||||||||| | ||||||||||||||| || |||| |||| | || Sbjct: 582 tttcttaagttgggtcaagatagcctccattgtgtactcgcggcgccaatttgacaacag 523 Query: 385 actgaacttcttcgggtcaaccgccccggtctcgtgattaacacaagccatgttgattct 444 ||||||||| | |||||||| || |||| | || ||||| | |||||||||||| Sbjct: 522 gctgaacttcctttggtcaaccaatccattctctgggtttacacaggtcatgttgattct 463 Query: 445 tgaatggaatctaacagatggtgccttctcagggtagtccttgtcacaaaacagcttcag 504 ||| || ||| | |||| ||||| | | || |||||||||||||| || || |||||||| Sbjct: 462 tgagtgaaattttacagttggtggcctgtctgggtagtccttgtcgcagaaaagcttcag 403 Query: 505 ctggtagatgcgaccctcatggacagtattgtgaggaccaataatggtgccagtccatga 564 ||||| || || |||||||||||||| || || ||||||||||| ||||| ||||| || Sbjct: 402 ttggtatatccggccctcatggacagtgttatggggaccaataattgtgcctgtccaaga 343 Query: 565 ccgcatgtatatgtcatcagcatcatccattccatagctgacagttccatctccaatgcc 624 |||||||| || || || |||||||||||||||||||| || | |||||| || ||||| Sbjct: 342 gcgcatgtagatatcgtctgcatcatccattccatagcttactgatccatcaccgatgcc 283 Query: 625 cttctccccgcgctcaagctcttctagcagcctgaag 661 ||||||||| | |||||||||||||||||| |||||| Sbjct: 282 cttctcccctctctcaagctcttctagcagtctgaag 246
>ref|NM_115116.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G52560 transcript variant AT3G52560.1 mRNA, complete cds Length = 864 Score = 176 bits (89), Expect = 6e-41 Identities = 245/297 (82%) Strand = Plus / Minus Query: 349 ctccattgtgtactctcgctgccagtttgctagcacactgaacttcttcgggtcaaccgc 408 ||||||||||||||||| ||||||||||| || | | || ||||| || || ||| | Sbjct: 483 ctccattgtgtactctctttgccagtttgcaagtagcccaaatttcttaggatccaccac 424 Query: 409 cccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgc 468 || || ||||| || |||||||||||||||| | ||||||||||| |||| ||| | Sbjct: 423 tcctgtttcgtggttgacacaagccatgttgacacgtgaatggaatcggacagttggagg 364 Query: 469 cttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggac 528 ||||| ||||| || ||||||||||| ||||||| ||| ||||| | ||| ||||| || Sbjct: 363 tttctccgggtaatctttgtcacaaaagagcttcaactgatagattctaccttcatgaac 304 Query: 529 agtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatc 588 ||| ||||||||||| || |||||||||||||| || ||||| || |||||||| |||| Sbjct: 303 agtgttgtgaggaccgatgatggtgccagtccaagaacgcatatagatgtcatctccatc 244 Query: 589 atccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| Sbjct: 243 atccattccatagctcacagttccatccccaatacctttctccccacgttcaagctc 187
>gb|DQ160040.1| Taraxacum officinale TO38-23 (To38-23) mRNA, partial cds Length = 475 Score = 176 bits (89), Expect = 6e-41 Identities = 215/257 (83%) Strand = Plus / Minus Query: 389 aacttcttcgggtcaaccgccccggtctcgtgattaacacaagccatgttgattcttgaa 448 ||||||||||| || ||| | ||||| || || || ||||||| |||||||| | ||| Sbjct: 295 aacttcttcggttccaccactccggtttcatggttgacacaagtcatgttgacccgagaa 236 Query: 449 tggaatctaacagatggtgccttctcagggtagtccttgtcacaaaacagcttcagctgg 508 ||||| | |||| ||| | |||||||||||| || ||||||||||| ||||||| ||| Sbjct: 235 tggaaacggacagttggaggcttctcagggtaatctttgtcacaaaatagcttcaattgg 176 Query: 509 tagatgcgaccctcatggacagtattgtgaggaccaataatggtgccagtccatgaccgc 568 ||||||||||||||||| |||| ||||||||| || || |||||||| |||||||| ||| Sbjct: 175 tagatgcgaccctcatgcacagaattgtgagggccgatgatggtgcctgtccatgatcgc 116 Query: 569 atgtatatgtcatcagcatcatccattccatagctgacagttccatctccaatgcccttc 628 || || || |||||| ||||||||||||||||||| ||||| |||||||| || ||||| Sbjct: 115 atatagatatcatcaccatcatccattccatagctcacagtgccatctccgatacccttt 56 Query: 629 tccccgcgctcaagctc 645 || || ||||||||||| Sbjct: 55 tctccacgctcaagctc 39
>gb|AY072492.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 587 Score = 176 bits (89), Expect = 6e-41 Identities = 245/297 (82%) Strand = Plus / Minus Query: 349 ctccattgtgtactctcgctgccagtttgctagcacactgaacttcttcgggtcaaccgc 408 ||||||||||||||||| ||||||||||| || | | || ||||| || || ||| | Sbjct: 357 ctccattgtgtactctctttgccagtttgcaagtagcccaaatttcttaggatccaccac 298 Query: 409 cccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgc 468 || || ||||| || |||||||||||||||| | ||||||||||| |||| ||| | Sbjct: 297 tcctgtttcgtggttgacacaagccatgttgacacgtgaatggaatcggacagttggagg 238 Query: 469 cttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggac 528 ||||| ||||| || ||||||||||| ||||||| ||| ||||| | ||| ||||| || Sbjct: 237 tttctccgggtaatctttgtcacaaaagagcttcaactgatagattctaccttcatgaac 178 Query: 529 agtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatc 588 ||| ||||||||||| || |||||||||||||| || ||||| || |||||||| |||| Sbjct: 177 agtgttgtgaggaccgatgatggtgccagtccaagaacgcatatagatgtcatctccatc 118 Query: 589 atccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| Sbjct: 117 atccattccatagctcacagttccatccccaatacctttctccccacgttcaagctc 61
>gb|AY042846.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 810 Score = 176 bits (89), Expect = 6e-41 Identities = 245/297 (82%) Strand = Plus / Minus Query: 349 ctccattgtgtactctcgctgccagtttgctagcacactgaacttcttcgggtcaaccgc 408 ||||||||||||||||| ||||||||||| || | | || ||||| || || ||| | Sbjct: 432 ctccattgtgtactctctttgccagtttgcaagtagcccaaatttcttaggatccaccac 373 Query: 409 cccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgc 468 || || ||||| || |||||||||||||||| | ||||||||||| |||| ||| | Sbjct: 372 tcctgtttcgtggttgacacaagccatgttgacacgtgaatggaatcggacagttggagg 313 Query: 469 cttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggac 528 ||||| ||||| || ||||||||||| ||||||| ||| ||||| | ||| ||||| || Sbjct: 312 tttctccgggtaatctttgtcacaaaagagcttcaactgatagattctaccttcatgaac 253 Query: 529 agtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatc 588 ||| ||||||||||| || |||||||||||||| || ||||| || |||||||| |||| Sbjct: 252 agtgttgtgaggaccgatgatggtgccagtccaagaacgcatatagatgtcatctccatc 193 Query: 589 atccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| Sbjct: 192 atccattccatagctcacagttccatccccaatacctttctccccacgttcaagctc 136
>emb|BX825709.1|CNS0A69P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL58ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 838 Score = 176 bits (89), Expect = 6e-41 Identities = 245/297 (82%) Strand = Plus / Minus Query: 349 ctccattgtgtactctcgctgccagtttgctagcacactgaacttcttcgggtcaaccgc 408 ||||||||||||||||| ||||||||||| || | | || ||||| || || ||| | Sbjct: 458 ctccattgtgtactctctttgccagtttgcaagtagcccaaatttcttaggatccaccac 399 Query: 409 cccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgc 468 || || ||||| || |||||||||||||||| | ||||||||||| |||| ||| | Sbjct: 398 tcctgtttcgtggttgacacaagccatgttgacacgtgaatggaatcggacagttggagg 339 Query: 469 cttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggac 528 ||||| ||||| || ||||||||||| ||||||| ||| ||||| | ||| ||||| || Sbjct: 338 tttctccgggtaatctttgtcacaaaagagcttcaactgatagattctaccttcatgaac 279 Query: 529 agtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatc 588 ||| ||||||||||| || |||||||||||||| || ||||| || |||||||| |||| Sbjct: 278 agtgttgtgaggaccgatgatggtgccagtccaagaacgcatatagatgtcatctccatc 219 Query: 589 atccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| Sbjct: 218 atccattccatagctcacagttccatccccaatacctttctccccacgttcaagctc 162
>gb|AY085609.1| Arabidopsis thaliana clone 16125 mRNA, complete sequence Length = 832 Score = 168 bits (85), Expect = 1e-38 Identities = 244/297 (82%) Strand = Plus / Minus Query: 349 ctccattgtgtactctcgctgccagtttgctagcacactgaacttcttcgggtcaaccgc 408 ||||||||||||||||| ||||||||||| || | | || ||||| || || ||| | Sbjct: 484 ctccattgtgtactctctttgccagtttgcaagtagcccaaatttcttaggatccaccac 425 Query: 409 cccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgc 468 || || |||||||| |||||||||||||||| | ||||||||| | |||| ||| | Sbjct: 424 tcctgtttcgtgattgacacaagccatgttgacacgtgaatggaaccggacagttggagg 365 Query: 469 cttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggac 528 ||||| ||||| || ||||||||||| ||||||| ||| ||||| | ||| ||||| || Sbjct: 364 tttctccgggtaatctttgtcacaaaagagcttcaactgatagattctaccttcatgaac 305 Query: 529 agtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatc 588 ||| ||||||||||| || || ||||||||||| || ||||| || |||||||| |||| Sbjct: 304 agtgttgtgaggaccgatgatagtgccagtccaagaacgcatatagatgtcatctccatc 245 Query: 589 atccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| Sbjct: 244 atccattccatagctcacagttccatccccaatacctttctccccacgttcaagctc 188
>ref|NM_129165.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT2G36060 transcript variant AT2G36060.1 mRNA, complete cds Length = 837 Score = 161 bits (81), Expect = 4e-36 Identities = 243/297 (81%) Strand = Plus / Minus Query: 349 ctccattgtgtactctcgctgccagtttgctagcacactgaacttcttcgggtcaaccgc 408 |||||||||||||| || ||||||||||| || || | |||||||| | || ||| | Sbjct: 538 ctccattgtgtactgtctttgccagtttgcaagaaccccaaacttctttgaatccaccac 479 Query: 409 cccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgc 468 ||||| || || || ||||||| ||||||||| | |||||||| | ||||| || | Sbjct: 478 gccggtatcatggttgacacaagtcatgttgatacgcgaatggaaccgaacagtcggagg 419 Query: 469 cttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggac 528 ||||||||||| || |||||||| || ||||||| ||| || || ||||||||||| || Sbjct: 418 tttctcagggtaatctttgtcacagaagagcttcaactgataaatccgaccctcatgtac 359 Query: 529 agtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatc 588 ||| ||||||||||| || || ||||||||||| || ||||| || |||||||| |||| Sbjct: 358 agtgttgtgaggaccgatgatagtgccagtccaagagcgcatataaatgtcatctccatc 299 Query: 589 atccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||||||| ||||||||||||||||| || ||||| || || |||||||| Sbjct: 298 atccattccatagctcacagttccatctccaatacctttctctccacgttcaagctc 242
>gb|AY093382.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme (At2g36060) mRNA, complete cds Length = 531 Score = 161 bits (81), Expect = 4e-36 Identities = 243/297 (81%) Strand = Plus / Minus Query: 349 ctccattgtgtactctcgctgccagtttgctagcacactgaacttcttcgggtcaaccgc 408 |||||||||||||| || ||||||||||| || || | |||||||| | || ||| | Sbjct: 354 ctccattgtgtactgtctttgccagtttgcaagaaccccaaacttctttgaatccaccac 295 Query: 409 cccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgc 468 ||||| || || || ||||||| ||||||||| | |||||||| | ||||| || | Sbjct: 294 gccggtatcatggttgacacaagtcatgttgatacgcgaatggaaccgaacagtcggagg 235 Query: 469 cttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggac 528 ||||||||||| || |||||||| || ||||||| ||| || || ||||||||||| || Sbjct: 234 tttctcagggtaatctttgtcacagaagagcttcaactgataaatccgaccctcatgtac 175 Query: 529 agtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatc 588 ||| ||||||||||| || || ||||||||||| || ||||| || |||||||| |||| Sbjct: 174 agtgttgtgaggaccgatgatagtgccagtccaagagcgcatataaatgtcatctccatc 115 Query: 589 atccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||||||| ||||||||||||||||| || ||||| || || |||||||| Sbjct: 114 atccattccatagctcacagttccatctccaatacctttctctccacgttcaagctc 58
>gb|AY062760.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme (At2g36060; F11F19.3) mRNA, complete cds Length = 769 Score = 161 bits (81), Expect = 4e-36 Identities = 243/297 (81%) Strand = Plus / Minus Query: 349 ctccattgtgtactctcgctgccagtttgctagcacactgaacttcttcgggtcaaccgc 408 |||||||||||||| || ||||||||||| || || | |||||||| | || ||| | Sbjct: 472 ctccattgtgtactgtctttgccagtttgcaagaaccccaaacttctttgaatccaccac 413 Query: 409 cccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgc 468 ||||| || || || ||||||| ||||||||| | |||||||| | ||||| || | Sbjct: 412 gccggtatcatggttgacacaagtcatgttgatacgcgaatggaaccgaacagtcggagg 353 Query: 469 cttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggac 528 ||||||||||| || |||||||| || ||||||| ||| || || ||||||||||| || Sbjct: 352 tttctcagggtaatctttgtcacagaagagcttcaactgataaatccgaccctcatgtac 293 Query: 529 agtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatc 588 ||| ||||||||||| || || ||||||||||| || ||||| || |||||||| |||| Sbjct: 292 agtgttgtgaggaccgatgatagtgccagtccaagagcgcatataaatgtcatctccatc 233 Query: 589 atccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||||||| ||||||||||||||||| || ||||| || || |||||||| Sbjct: 232 atccattccatagctcacagttccatctccaatacctttctctccacgttcaagctc 176
>gb|AY089084.1| Arabidopsis thaliana clone 29951 mRNA, complete sequence Length = 798 Score = 161 bits (81), Expect = 4e-36 Identities = 243/297 (81%) Strand = Plus / Minus Query: 349 ctccattgtgtactctcgctgccagtttgctagcacactgaacttcttcgggtcaaccgc 408 |||||||||||||| || ||||||||||| || || | |||||||| | || ||| | Sbjct: 514 ctccattgtgtactgtctttgccagtttgcaagaaccccaaacttctttgaatccaccac 455 Query: 409 cccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgc 468 ||||| || || || ||||||| ||||||||| | |||||||| | ||||| || | Sbjct: 454 gccggtatcatggttgacacaagtcatgttgatacgcgaatggaaccgaacagtcggagg 395 Query: 469 cttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggac 528 ||||||||||| || |||||||| || ||||||| ||| || || ||||||||||| || Sbjct: 394 tttctcagggtaatctttgtcacagaagagcttcaactgataaatccgaccctcatgtac 335 Query: 529 agtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatc 588 ||| ||||||||||| || || ||||||||||| || ||||| || |||||||| |||| Sbjct: 334 agtgttgtgaggaccgatgatagtgccagtccaagagcgcatataaatgtcatctccatc 275 Query: 589 atccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||||||| ||||||||||||||||| || ||||| || || |||||||| Sbjct: 274 atccattccatagctcacagttccatctccaatacctttctctccacgttcaagctc 218
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 157 bits (79), Expect = 6e-35 Identities = 112/123 (91%) Strand = Plus / Plus Query: 539 ggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattcca 598 |||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 7152075 ggaccaatgatggtgccagtccaagaccgcatgtagatgtcatctgcatcatccattcca 7152134 Query: 599 tagctgacagttccatctccaatgcccttctccccgcgctcaagctcttctagcagcctg 658 ||||| || |||||||||||||||||||| || || || |||||||||||||||| |||| Sbjct: 7152135 tagctcacggttccatctccaatgcccttttcaccacgttcaagctcttctagcaacctg 7152194 Query: 659 aag 661 ||| Sbjct: 7152195 aag 7152197 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Plus Query: 404 accgccccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagat 463 ||||| || ||||| ||||||||||| | ||| |||||||||||||| || | |||||| Sbjct: 7151530 accgctccagtctcatgattaacacacgacatattgattcttgaatgaaaccggacagat 7151589 Query: 464 ggtgccttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctca 523 |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 7151590 ggtggcttctctgggtagtccttgtcacagaacagcttcagctggtagatgcgaccttca 7151649 Query: 524 tggaca 529 |||||| Sbjct: 7151650 tggaca 7151655 Score = 95.6 bits (48), Expect = 2e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 259 actccgctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgc 318 ||||| ||||||||| |||||||||||||| ||||| | |||||| ||||| | | ||| Sbjct: 7151291 actcctctagaagaacgtcccttctggaggttgcaccaacttgcgattctgcggggttgc 7151350 Query: 319 catgtctttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgc 378 ||| || ||||| |||||||| | || | |||||| |||||||| |||||||||||||| Sbjct: 7151351 catctccttcttgagctgggtaaggatagtctccatggtgtactcgcgctgccagtttgc 7151410 Query: 379 tagcacactgaacttcttcgggtcaacc 406 ||| |||| |||||| ||| ||||||| Sbjct: 7151411 tagaacaccaaacttcctcgagtcaacc 7151438
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 157 bits (79), Expect = 6e-35 Identities = 112/123 (91%) Strand = Plus / Plus Query: 539 ggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattcca 598 |||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 4180 ggaccaatgatggtgccagtccaagaccgcatgtagatgtcatctgcatcatccattcca 4239 Query: 599 tagctgacagttccatctccaatgcccttctccccgcgctcaagctcttctagcagcctg 658 ||||| || |||||||||||||||||||| || || || |||||||||||||||| |||| Sbjct: 4240 tagctcacggttccatctccaatgcccttttcaccacgttcaagctcttctagcaacctg 4299 Query: 659 aag 661 ||| Sbjct: 4300 aag 4302 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Plus Query: 404 accgccccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagat 463 ||||| || ||||| ||||||||||| | ||| |||||||||||||| || | |||||| Sbjct: 3635 accgctccagtctcatgattaacacacgacatattgattcttgaatgaaaccggacagat 3694 Query: 464 ggtgccttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctca 523 |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 3695 ggtggcttctctgggtagtccttgtcacagaacagcttcagctggtagatgcgaccttca 3754 Query: 524 tggaca 529 |||||| Sbjct: 3755 tggaca 3760 Score = 95.6 bits (48), Expect = 2e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 259 actccgctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgc 318 ||||| ||||||||| |||||||||||||| ||||| | |||||| ||||| | | ||| Sbjct: 3396 actcctctagaagaacgtcccttctggaggttgcaccaacttgcgattctgcggggttgc 3455 Query: 319 catgtctttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgc 378 ||| || ||||| |||||||| | || | |||||| |||||||| |||||||||||||| Sbjct: 3456 catctccttcttgagctgggtaaggatagtctccatggtgtactcgcgctgccagtttgc 3515 Query: 379 tagcacactgaacttcttcgggtcaacc 406 ||| |||| |||||| ||| ||||||| Sbjct: 3516 tagaacaccaaacttcctcgagtcaacc 3543
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 157 bits (79), Expect = 6e-35 Identities = 112/123 (91%) Strand = Plus / Plus Query: 539 ggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattcca 598 |||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct: 104154 ggaccaatgatggtgccagtccaagaccgcatgtagatgtcatctgcatcatccattcca 104213 Query: 599 tagctgacagttccatctccaatgcccttctccccgcgctcaagctcttctagcagcctg 658 ||||| || |||||||||||||||||||| || || || |||||||||||||||| |||| Sbjct: 104214 tagctcacggttccatctccaatgcccttttcaccacgttcaagctcttctagcaacctg 104273 Query: 659 aag 661 ||| Sbjct: 104274 aag 104276 Score = 139 bits (70), Expect = 1e-29 Identities = 112/126 (88%) Strand = Plus / Plus Query: 404 accgccccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagat 463 ||||| || ||||| ||||||||||| | ||| |||||||||||||| || | |||||| Sbjct: 103609 accgctccagtctcatgattaacacacgacatattgattcttgaatgaaaccggacagat 103668 Query: 464 ggtgccttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctca 523 |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 103669 ggtggcttctctgggtagtccttgtcacagaacagcttcagctggtagatgcgaccttca 103728 Query: 524 tggaca 529 |||||| Sbjct: 103729 tggaca 103734 Score = 95.6 bits (48), Expect = 2e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 259 actccgctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgc 318 ||||| ||||||||| |||||||||||||| ||||| | |||||| ||||| | | ||| Sbjct: 103370 actcctctagaagaacgtcccttctggaggttgcaccaacttgcgattctgcggggttgc 103429 Query: 319 catgtctttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgc 378 ||| || ||||| |||||||| | || | |||||| |||||||| |||||||||||||| Sbjct: 103430 catctccttcttgagctgggtaaggatagtctccatggtgtactcgcgctgccagtttgc 103489 Query: 379 tagcacactgaacttcttcgggtcaacc 406 ||| |||| |||||| ||| ||||||| Sbjct: 103490 tagaacaccaaacttcctcgagtcaacc 103517
>ref|NM_180353.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT3G52560 transcript variant AT3G52560.2 mRNA, complete cds Length = 864 Score = 155 bits (78), Expect = 2e-34 Identities = 245/300 (81%), Gaps = 3/300 (1%) Strand = Plus / Minus Query: 349 ctccattgtgtactctcgctgccagtttgctagcacactgaacttcttcgggtcaaccgc 408 ||||||||||||||||| ||||||||||| || | | || ||||| || || ||| | Sbjct: 486 ctccattgtgtactctctttgccagtttgcaagtagcccaaatttcttaggatccaccac 427 Query: 409 cccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgc 468 || || ||||| || |||||||||||||||| | ||||||||||| |||| ||| | Sbjct: 426 tcctgtttcgtggttgacacaagccatgttgacacgtgaatggaatcggacagttggagg 367 Query: 469 cttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggac 528 ||||| ||||| || ||||||||||| ||||||| ||| ||||| | ||| ||||| || Sbjct: 366 tttctccgggtaatctttgtcacaaaagagcttcaactgatagattctaccttcatgaac 307 Query: 529 agta---ttgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagc 585 ||| ||||||||||| || |||||||||||||| || ||||| || |||||||| | Sbjct: 306 agttacgttgtgaggaccgatgatggtgccagtccaagaacgcatatagatgtcatctcc 247 Query: 586 atcatccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 |||||||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| Sbjct: 246 atcatccattccatagctcacagttccatccccaatacctttctccccacgttcaagctc 187
>ref|XM_469523.1| Oryza sativa (japonica cultivar-group), mRNA Length = 486 Score = 141 bits (71), Expect = 3e-30 Identities = 143/167 (85%) Strand = Plus / Minus Query: 488 tcacaaaacagcttcagctggtagatgcgaccctcatggacagtattgtgaggaccaata 547 ||||| |||| ||||| ||| ||||| || |||||||| |||||||| |||| ||||| Sbjct: 218 tcacagaacaacttcaactgatagattcgtccctcatgaacagtattaggagggccaatg 159 Query: 548 atggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattccatagctgaca 607 || || || ||||| || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 158 atagttcctgtccaggaacgcatatatatgtcatcagcatcatccattccatagctcact 99 Query: 608 gttccatctccaatgcccttctccccgcgctcaagctcttctagcag 654 || ||||| |||||||||||||| || |||||||||||||| ||||| Sbjct: 98 gtcccatcaccaatgcccttctcacctcgctcaagctcttcaagcag 52
>dbj|AK120951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L10, full insert sequence Length = 790 Score = 141 bits (71), Expect = 3e-30 Identities = 143/167 (85%) Strand = Plus / Minus Query: 488 tcacaaaacagcttcagctggtagatgcgaccctcatggacagtattgtgaggaccaata 547 ||||| |||| ||||| ||| ||||| || |||||||| |||||||| |||| ||||| Sbjct: 311 tcacagaacaacttcaactgatagattcgtccctcatgaacagtattaggagggccaatg 252 Query: 548 atggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattccatagctgaca 607 || || || ||||| || ||||| |||||||||||||||||||||||||||||||| || Sbjct: 251 atagttcctgtccaggaacgcatatatatgtcatcagcatcatccattccatagctcact 192 Query: 608 gttccatctccaatgcccttctccccgcgctcaagctcttctagcag 654 || ||||| |||||||||||||| || |||||||||||||| ||||| Sbjct: 191 gtcccatcaccaatgcccttctcacctcgctcaagctcttcaagcag 145
>ref|NM_179928.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT2G36060 transcript variant AT2G36060.2 mRNA, complete cds Length = 840 Score = 139 bits (70), Expect = 1e-29 Identities = 243/300 (81%), Gaps = 3/300 (1%) Strand = Plus / Minus Query: 349 ctccattgtgtactctcgctgccagtttgctagcacactgaacttcttcgggtcaaccgc 408 |||||||||||||| || ||||||||||| || || | |||||||| | || ||| | Sbjct: 541 ctccattgtgtactgtctttgccagtttgcaagaaccccaaacttctttgaatccaccac 482 Query: 409 cccggtctcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgc 468 ||||| || || || ||||||| ||||||||| | |||||||| | ||||| || | Sbjct: 481 gccggtatcatggttgacacaagtcatgttgatacgcgaatggaaccgaacagtcggagg 422 Query: 469 cttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggac 528 ||||||||||| || |||||||| || ||||||| ||| || || ||||||||||| || Sbjct: 421 tttctcagggtaatctttgtcacagaagagcttcaactgataaatccgaccctcatgtac 362 Query: 529 agta---ttgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagc 585 ||| ||||||||||| || || ||||||||||| || ||||| || |||||||| | Sbjct: 361 agttacgttgtgaggaccgatgatagtgccagtccaagagcgcatataaatgtcatctcc 302 Query: 586 atcatccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 |||||||||||||||||| ||||||||||||||||| || ||||| || || |||||||| Sbjct: 301 atcatccattccatagctcacagttccatctccaatacctttctctccacgttcaagctc 242
>gb|AY107839.1| Zea mays PCO143146 mRNA sequence Length = 1245 Score = 139 bits (70), Expect = 1e-29 Identities = 145/170 (85%) Strand = Plus / Minus Query: 488 tcacaaaacagcttcagctggtagatgcgaccctcatggacagtattgtgaggaccaata 547 |||||||||||||| | ||| ||||| || ||||| || ||||| ||| |||||||||| Sbjct: 440 tcacaaaacagctttaactgatagattcgtccctcgtgaacagtgttgggaggaccaatg 381 Query: 548 atggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattccatagctgaca 607 || || || ||||| |||||||| |||||||||||||||| ||||| |||||||| ||| Sbjct: 380 atagttcctgtccaggaccgcataaatatgtcatcagcatcgtccatcccatagctcaca 321 Query: 608 gttccatctccaatgcccttctccccgcgctcaagctcttctagcagcct 657 |||||||| |||||||||||||| || || || || |||||||||||||| Sbjct: 320 gttccatcaccaatgcccttctcaccacgttctagttcttctagcagcct 271
>gb|DQ235194.1| Solanum tuberosum clone 168B03 ubiquitin-conjugating enzyme family protein-like mRNA, complete cds Length = 682 Score = 135 bits (68), Expect = 2e-28 Identities = 152/180 (84%) Strand = Plus / Minus Query: 463 tggtgccttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctc 522 ||||| |||||| || || |||||||| || || ||||||| ||| || ||||| || || Sbjct: 345 tggtggcttctccggataatccttgtcgcagaatagcttcaactgataaatgcggccttc 286 Query: 523 atggacagtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatc 582 ||| |||| |||||||||||||||||||||||||||||| || ||||| || || ||||| Sbjct: 285 atgcacagaattgtgaggaccaataatggtgccagtccaagaacgcatataaatatcatc 226 Query: 583 agcatcatccattccatagctgacagttccatctccaatgcccttctccccgcgctcaag 642 |||||||||| |||||||| || || ||||||||||| ||||||||||| || ||||| Sbjct: 225 tccatcatccataccatagctcactgtcccatctccaatacccttctccccacgttcaag 166 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 350 tccattgtgtactctcgctgccagtttg 377 ||||| ||||||||||||||||| |||| Sbjct: 458 tccatagtgtactctcgctgccaatttg 431
>gb|DQ191643.1| Solanum tuberosum ubiquitin-conjugating enzyme family protein-like protein mRNA, complete cds Length = 764 Score = 135 bits (68), Expect = 2e-28 Identities = 152/180 (84%) Strand = Plus / Minus Query: 463 tggtgccttctcagggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctc 522 ||||| |||||| || || |||||||| || || ||||||| ||| || ||||| || || Sbjct: 337 tggtggcttctccggataatccttgtcgcagaatagcttcaactgataaatgcggccttc 278 Query: 523 atggacagtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatc 582 ||| |||| |||||||||||||||||||||||||||||| || ||||| || || ||||| Sbjct: 277 atgcacagaattgtgaggaccaataatggtgccagtccaagaacgcatataaatatcatc 218 Query: 583 agcatcatccattccatagctgacagttccatctccaatgcccttctccccgcgctcaag 642 |||||||||| |||||||| || || ||||||||||| ||||||||||| || ||||| Sbjct: 217 tccatcatccataccatagctcactgtcccatctccaatacccttctccccacgttcaag 158 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 350 tccattgtgtactctcgctgccagtttg 377 ||||| ||||||||||||||||| |||| Sbjct: 450 tccatagtgtactctcgctgccaatttg 423
>gb|AC150979.15| Medicago truncatula clone mth2-115a17, complete sequence Length = 152779 Score = 133 bits (67), Expect = 8e-28 Identities = 97/107 (90%) Strand = Plus / Plus Query: 542 ccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattccatag 601 |||||||| || |||||||||||| ||||| |||| |||||||| ||||||||||||||| Sbjct: 105445 ccaataatagtcccagtccatgactgcatgaatatatcatcagcgtcatccattccatag 105504 Query: 602 ctgacagttccatctccaatgcccttctccccgcgctcaagctcttc 648 || ||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 105505 ctaacagttccatctccaattcccttctcacctcgctcaagctcttc 105551 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 452 aatctaacagatggtgccttctcagggtagtccttgtcacaaaacagcttcagctggtag 511 |||||||||||||||| || || || || |||||| ||||||||| ||||| ||||||| Sbjct: 104008 aatctaacagatggtggattgtctggataatccttgccacaaaacaacttcaactggtag 104067 Query: 512 atgcgaccctcatggacagt 531 || ||||| ||||| ||||| Sbjct: 104068 atacgaccttcatgaacagt 104087
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence Length = 120870 Score = 133 bits (67), Expect = 8e-28 Identities = 97/107 (90%) Strand = Plus / Plus Query: 542 ccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattccatag 601 |||||||| || |||||||||||| ||||| |||| |||||||| ||||||||||||||| Sbjct: 2777 ccaataatagtcccagtccatgactgcatgaatatatcatcagcgtcatccattccatag 2836 Query: 602 ctgacagttccatctccaatgcccttctccccgcgctcaagctcttc 648 || ||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 2837 ctaacagttccatctccaattcccttctcacctcgctcaagctcttc 2883 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 452 aatctaacagatggtgccttctcagggtagtccttgtcacaaaacagcttcagctggtag 511 |||||||||||||||| || || || || |||||| ||||||||| ||||| ||||||| Sbjct: 1340 aatctaacagatggtggattgtctggataatccttgccacaaaacaacttcaactggtag 1399 Query: 512 atgcgaccctcatggacagt 531 || ||||| ||||| ||||| Sbjct: 1400 atacgaccttcatgaacagt 1419
>gb|DQ097727.1| Arachis hypogaea ubiquitin-conjugating enzyme 2 mRNA, complete cds Length = 818 Score = 129 bits (65), Expect = 1e-26 Identities = 164/197 (83%) Strand = Plus / Minus Query: 452 aatctaacagatggtgccttctcagggtagtccttgtcacaaaacagcttcagctggtag 511 |||||||||||||||| || || || || ||||| ||||||||| |||| |||||| Sbjct: 355 aatctaacagatggtggattgtctggataatccttaccacaaaacaatttcaattggtag 296 Query: 512 atgcgaccctcatggacagtattgtgaggaccaataatggtgccagtccatgaccgcatg 571 || || || || ||||||||| | ||||| ||||| || ||||||||||| ||||| Sbjct: 295 atacgcccttcgtggacagtaccagggggacctataattgtcccagtccatgattgcatg 236 Query: 572 tatatgtcatcagcatcatccattccatagctgacagttccatctccaatgcccttctcc 631 || || |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 235 tagatatcatcagcatcatccattccatagcttacagttccatctccaattcccttctca 176 Query: 632 ccgcgctcaagctcttc 648 || | |||||||||||| Sbjct: 175 cctctctcaagctcttc 159
>dbj|AP004536.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15N19, TM0097b, complete sequence Length = 78574 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 545 ataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattccatagctg 604 ||||| || |||||||||||| |||||||||| |||||||| || |||||||||||||| Sbjct: 75052 ataattgttccagtccatgactgcatgtatatatcatcagcgtcgtccattccatagctt 75111 Query: 605 acagttccatctccaatgcccttctccccgcgctcaagctcttc 648 ||||||||||||||||| |||||||| || |||||||||||||| Sbjct: 75112 acagttccatctccaattcccttctcacctcgctcaagctcttc 75155
>gb|DQ160024.1| Taraxacum officinale TO25-123 (To25-123) mRNA, partial cds Length = 203 Score = 123 bits (62), Expect = 8e-25 Identities = 116/134 (86%) Strand = Plus / Minus Query: 485 ttgtcacaaaacagcttcagctggtagatgcgaccctcatggacagtattgtgaggacca 544 |||||||||||||||||||| || || |||||||| || || |||| |||||||||||| Sbjct: 156 ttgtcacaaaacagcttcagttgataaatgcgaccttcgtgtacagagttgtgaggacca 97 Query: 545 ataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattccatagctg 604 || ||||||||||||||||| |||||||| ||||| || |||||||||||||||| || Sbjct: 96 atgatggtgccagtccatgaacgcatgtaaatgtcgtcgccatcatccattccataactc 37 Query: 605 acagttccatctcc 618 || || |||||||| Sbjct: 36 actgtgccatctcc 23
>gb|AY587772.1| Tamarix androssowii ubiquitin-conjugating enzyme family protein mRNA, complete cds Length = 607 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Minus Query: 485 ttgtcacaaaacagcttcagctggtagatgcgaccctcatggacagtattgtgaggacca 544 |||||||| || |||||||| || || ||||| |||||||| |||||||||||||||||| Sbjct: 322 ttgtcacagaagagcttcagttgataaatgcggccctcatgtacagtattgtgaggacca 263 Query: 545 ataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattccatagctg 604 || || ||||| ||||| || ||||| ||||| ||||| |||||||||| ||||| ||| Sbjct: 262 attattgtgcctgtccaagaacgcatatatatatcatctccatcatccataccataactg 203 Query: 605 acagttccatctccaat 621 ||| ||||||||||||| Sbjct: 202 acacttccatctccaat 186
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 117 bits (59), Expect = 5e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 539 ggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattcca 598 ||||||||||| ||||| ||||| || |||||||| || || || ||||||||||||||| Sbjct: 25593240 ggaccaataattgtgcctgtccaagagcgcatgtagatatcgtctgcatcatccattcca 25593299 Query: 599 tagctgacagttccatctccaatgcccttctccccgcgctcaagctcttctagcagcctg 658 ||||| || | |||||| || |||||||||||||| | |||||||||||||||||| ||| Sbjct: 25593300 tagcttactgatccatcaccgatgcccttctcccctctctcaagctcttctagcagtctg 25593359 Query: 659 aag 661 ||| Sbjct: 25593360 aag 25593362 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 265 ctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgccatgtc 324 ||||||||||||||| ||||||||||||||||| || ||||| || | |||||||| || Sbjct: 25592752 ctagaagaatgtcccctctggaggctgcactagtttccggttgtgtgatgctgccatctc 25592811 Query: 325 tttcttcagctgggtcaagacatgctccattgtgtactc 363 |||||| || |||||||||| | ||||||||||||||| Sbjct: 25592812 tttcttaagttgggtcaagatagcctccattgtgtactc 25592850 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 433 catgttgattcttgaatggaatctaacagatggtgccttctcagggtagtccttgtcaca 492 ||||||||||||||| || ||| | |||| ||||| | | || |||||||||||||| || Sbjct: 25593011 catgttgattcttgagtgaaattttacagttggtggcctgtctgggtagtccttgtcgca 25593070 Query: 493 aaacagcttcagctggtagatgcgaccctcatggacagt 531 || |||||||| ||||| || || |||||||||||||| Sbjct: 25593071 gaaaagcttcagttggtatatccggccctcatggacagt 25593109
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 117 bits (59), Expect = 5e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 539 ggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattcca 598 ||||||||||| ||||| ||||| || |||||||| || || || ||||||||||||||| Sbjct: 25521416 ggaccaataattgtgcctgtccaagagcgcatgtagatatcgtctgcatcatccattcca 25521475 Query: 599 tagctgacagttccatctccaatgcccttctccccgcgctcaagctcttctagcagcctg 658 ||||| || | |||||| || |||||||||||||| | |||||||||||||||||| ||| Sbjct: 25521476 tagcttactgatccatcaccgatgcccttctcccctctctcaagctcttctagcagtctg 25521535 Query: 659 aag 661 ||| Sbjct: 25521536 aag 25521538 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 265 ctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgccatgtc 324 ||||||||||||||| ||||||||||||||||| || ||||| || | |||||||| || Sbjct: 25520928 ctagaagaatgtcccctctggaggctgcactagtttccggttgtgtgatgctgccatctc 25520987 Query: 325 tttcttcagctgggtcaagacatgctccattgtgtactc 363 |||||| || |||||||||| | ||||||||||||||| Sbjct: 25520988 tttcttaagttgggtcaagatagcctccattgtgtactc 25521026 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 433 catgttgattcttgaatggaatctaacagatggtgccttctcagggtagtccttgtcaca 492 ||||||||||||||| || ||| | |||| ||||| | | || |||||||||||||| || Sbjct: 25521187 catgttgattcttgagtgaaattttacagttggtggcctgtctgggtagtccttgtcgca 25521246 Query: 493 aaacagcttcagctggtagatgcgaccctcatggacagt 531 || |||||||| ||||| || || |||||||||||||| Sbjct: 25521247 gaaaagcttcagttggtatatccggccctcatggacagt 25521285
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 117 bits (59), Expect = 5e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 539 ggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattcca 598 ||||||||||| ||||| ||||| || |||||||| || || || ||||||||||||||| Sbjct: 80478 ggaccaataattgtgcctgtccaagagcgcatgtagatatcgtctgcatcatccattcca 80419 Query: 599 tagctgacagttccatctccaatgcccttctccccgcgctcaagctcttctagcagcctg 658 ||||| || | |||||| || |||||||||||||| | |||||||||||||||||| ||| Sbjct: 80418 tagcttactgatccatcaccgatgcccttctcccctctctcaagctcttctagcagtctg 80359 Query: 659 aag 661 ||| Sbjct: 80358 aag 80356 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Minus Query: 265 ctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgccatgtc 324 ||||||||||||||| ||||||||||||||||| || ||||| || | |||||||| || Sbjct: 80966 ctagaagaatgtcccctctggaggctgcactagtttccggttgtgtgatgctgccatctc 80907 Query: 325 tttcttcagctgggtcaagacatgctccattgtgtactc 363 |||||| || |||||||||| | ||||||||||||||| Sbjct: 80906 tttcttaagttgggtcaagatagcctccattgtgtactc 80868 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 433 catgttgattcttgaatggaatctaacagatggtgccttctcagggtagtccttgtcaca 492 ||||||||||||||| || ||| | |||| ||||| | | || |||||||||||||| || Sbjct: 80707 catgttgattcttgagtgaaattttacagttggtggcctgtctgggtagtccttgtcgca 80648 Query: 493 aaacagcttcagctggtagatgcgaccctcatggacagt 531 || |||||||| ||||| || || |||||||||||||| Sbjct: 80647 gaaaagcttcagttggtatatccggccctcatggacagt 80609
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 557 gtccatgaccgcatgtatatgtcatcagcatcatccattccatagctgacagttccatct 616 ||||| || ||||| |||||||||||||||||||||||||||||||| || || ||||| Sbjct: 28490622 gtccaggaacgcatatatatgtcatcagcatcatccattccatagctcactgtcccatca 28490563 Query: 617 ccaatgcccttctccccgcgctcaagctcttctagcag 654 |||||||||||||| || |||||||||||||| ||||| Sbjct: 28490562 ccaatgcccttctcacctcgctcaagctcttcaagcag 28490525
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 557 gtccatgaccgcatgtatatgtcatcagcatcatccattccatagctgacagttccatct 616 ||||| || ||||| |||||||||||||||||||||||||||||||| || || ||||| Sbjct: 28581946 gtccaggaacgcatatatatgtcatcagcatcatccattccatagctcactgtcccatca 28581887 Query: 617 ccaatgcccttctccccgcgctcaagctcttctagcag 654 |||||||||||||| || |||||||||||||| ||||| Sbjct: 28581886 ccaatgcccttctcacctcgctcaagctcttcaagcag 28581849
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 557 gtccatgaccgcatgtatatgtcatcagcatcatccattccatagctgacagttccatct 616 ||||| || ||||| |||||||||||||||||||||||||||||||| || || ||||| Sbjct: 84752 gtccaggaacgcatatatatgtcatcagcatcatccattccatagctcactgtcccatca 84693 Query: 617 ccaatgcccttctccccgcgctcaagctcttctagcag 654 |||||||||||||| || |||||||||||||| ||||| Sbjct: 84692 ccaatgcccttctcacctcgctcaagctcttcaagcag 84655
>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22 Length = 100028 Score = 113 bits (57), Expect = 8e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 533 ttgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatcc 592 ||||||||||| || |||||||||||||| || ||||| || |||||||| |||||||| Sbjct: 15750 ttgtgaggaccgatgatggtgccagtccaagaacgcatatagatgtcatctccatcatcc 15809 Query: 593 attccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||| ||||||||||| ||||| || |||||||| || |||||||| Sbjct: 15810 attccatagctcacagttccatccccaatacctttctccccacgttcaagctc 15862 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 416 tcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgccttctca 475 ||||| || |||||||||||||||| | ||||||||||| |||| ||| | ||||| Sbjct: 15393 tcgtggttgacacaagccatgttgacacgtgaatggaatcggacagttggaggtttctcc 15452 Query: 476 gggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggacagt 531 ||||| || ||||||||||| ||||||| ||| ||||| | ||| ||||| ||||| Sbjct: 15453 gggtaatctttgtcacaaaagagcttcaactgatagattctaccttcatgaacagt 15508 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 349 ctccattgtgtactctcgctgccagtttgc 378 ||||||||||||||||| ||||||||||| Sbjct: 15242 ctccattgtgtactctctttgccagtttgc 15271
>emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BAC clone F22O6 Length = 93443 Score = 113 bits (57), Expect = 8e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 533 ttgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatcc 592 ||||||||||| || |||||||||||||| || ||||| || |||||||| |||||||| Sbjct: 77467 ttgtgaggaccgatgatggtgccagtccaagaacgcatatagatgtcatctccatcatcc 77526 Query: 593 attccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||| ||||||||||| ||||| || |||||||| || |||||||| Sbjct: 77527 attccatagctcacagttccatccccaatacctttctccccacgttcaagctc 77579 Score = 63.9 bits (32), Expect = 6e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 416 tcgtgattaacacaagccatgttgattcttgaatggaatctaacagatggtgccttctca 475 ||||| || |||||||||||||||| | ||||||||||| |||| ||| | ||||| Sbjct: 77110 tcgtggttgacacaagccatgttgacacgtgaatggaatcggacagttggaggtttctcc 77169 Query: 476 gggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggacagt 531 ||||| || ||||||||||| ||||||| ||| ||||| | ||| ||||| ||||| Sbjct: 77170 gggtaatctttgtcacaaaagagcttcaactgatagattctaccttcatgaacagt 77225 Score = 44.1 bits (22), Expect = 0.58 Identities = 28/30 (93%) Strand = Plus / Plus Query: 349 ctccattgtgtactctcgctgccagtttgc 378 ||||||||||||||||| ||||||||||| Sbjct: 76959 ctccattgtgtactctctttgccagtttgc 76988
>ref|NM_102175.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G23260 mRNA, complete cds Length = 772 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 528 cagtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcat 587 ||||||| ||||||||| ||||||||||||||| || |||| || || |||||||||| Sbjct: 286 cagtattaggaggaccaagaatggtgccagtccaagattgcatataaatatcatcagcat 227 Query: 588 catccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctctt 647 |||||||||||||||| ||||| ||||||||||| || ||||| || | |||||||||| Sbjct: 226 catccattccatagctaacagtaccatctccaatacctttctcacctctttcaagctctt 167 Query: 648 c 648 | Sbjct: 166 c 166
>gb|AY093340.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260) mRNA, complete cds Length = 618 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 528 cagtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcat 587 ||||||| ||||||||| ||||||||||||||| || |||| || || |||||||||| Sbjct: 172 cagtattaggaggaccaagaatggtgccagtccaagattgcatataaatatcatcagcat 113 Query: 588 catccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctctt 647 |||||||||||||||| ||||| ||||||||||| || ||||| || | |||||||||| Sbjct: 112 catccattccatagctaacagtaccatctccaatacctttctcacctctttcaagctctt 53 Query: 648 c 648 | Sbjct: 52 c 52
>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete sequence Length = 120938 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 533 ttgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatcc 592 ||||||||||| || || ||||||||||| || ||||| || |||||||| |||||||| Sbjct: 13549 ttgtgaggaccgatgatagtgccagtccaagagcgcatataaatgtcatctccatcatcc 13490 Query: 593 attccatagctgacagttccatctccaatgcccttctccccgcgctcaagctc 645 ||||||||||| ||||||||||||||||| || ||||| || || |||||||| Sbjct: 13489 attccatagctcacagttccatctccaatacctttctctccacgttcaagctc 13437 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 425 acacaagccatgttgattcttgaatggaatctaacagatggtgccttctcagggtagtcc 484 ||||||| ||||||||| | |||||||| | ||||| || | ||||||||||| || Sbjct: 13783 acacaagtcatgttgatacgcgaatggaaccgaacagtcggaggtttctcagggtaatct 13724 Query: 485 ttgtcacaaaacagcttcagctggtagatgcgaccctcatggacagt 531 |||||||| || ||||||| ||| || || ||||||||||| ||||| Sbjct: 13723 ttgtcacagaagagcttcaactgataaatccgaccctcatgtacagt 13677
>gb|AY059896.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260; F26F24.10) mRNA, complete cds Length = 771 Score = 105 bits (53), Expect = 2e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 528 cagtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcat 587 ||||||| ||||||||| ||||||||||||||| || |||| || || |||||||||| Sbjct: 286 cagtattaggaggaccaagaatggtgccagtccaagattgcatataaatatcatcagcat 227 Query: 588 catccattccatagctgacagttccatctccaatgcccttctccccgcgctcaagctctt 647 |||||||||||||||| ||||| ||||||||||| || ||||| || | |||||||||| Sbjct: 226 catccattccatagctaacagtaccatctccaatacctttctcacctctttcaagctctt 167 Query: 648 c 648 | Sbjct: 166 c 166
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I, complete sequence Length = 99053 Score = 103 bits (52), Expect = 7e-19 Identities = 97/112 (86%) Strand = Plus / Plus Query: 537 gaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattc 596 ||||||||| ||||||||||||||| || |||| || || ||||||||||||||||||| Sbjct: 34546 gaggaccaagaatggtgccagtccaagattgcatataaatatcatcagcatcatccattc 34605 Query: 597 catagctgacagttccatctccaatgcccttctccccgcgctcaagctcttc 648 ||||||| ||||| ||||||||||| || ||||| || | ||||||||||| Sbjct: 34606 catagctaacagtaccatctccaatacctttctcacctctttcaagctcttc 34657
>gb|BT013203.1| Lycopersicon esculentum clone 134376R, mRNA sequence Length = 843 Score = 101 bits (51), Expect = 3e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 489 cacaaaacagcttcagctggtagatgcgaccctcatggacagtattgtgaggaccaataa 548 ||||||| || |||||||| |||||||| || || || |||||||| |||| ||||| | Sbjct: 352 cacaaaatagtttcagctgatagatgcgcccttcgtgtacagtattaggagggccaatga 293 Query: 549 tggtgccagtccatgaccgcatgtatatgtcatcagcatcatccattccatagctgacag 608 | || || ||||||||| ||||||| | |||||| ||||||||||| ||||||||||||| Sbjct: 292 tagttcctgtccatgactgcatgtacacgtcatctgcatcatccatcccatagctgacag 233 Query: 609 ttccatc 615 ||||||| Sbjct: 232 ttccatc 226
>gb|AF051209.1|AF051209 Picea mariana CROC-1-like protein (Sb13) mRNA, partial cds Length = 700 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 532 attgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatc 591 ||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| || Sbjct: 158 attgtgaggaccaatgatggtaccagtccatgaccgcatgtatatatcatcgctatcgtc 99 Query: 592 cattccatagctgacagttccatctccaatgcccttctcccc 633 |||||| ||||||||| ||||||| || || || |||||||| Sbjct: 98 cattccgtagctgacacttccatcgcctattcctttctcccc 57 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 413 gtctcgtgattaacacaagccatgttga 440 ||||| ||||||||||||| |||||||| Sbjct: 277 gtctcctgattaacacaagtcatgttga 250
>ref|XM_474414.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 265 ctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgccatgtc 324 ||||||||| ||||||||||||||||| || ||||||||| | || | ||| ||||| || Sbjct: 447 ctagaagaaggtcccttctggaggctgaaccagcttgcggctgtgcggcgcggccatctc 388 Query: 325 tttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgctagcac 384 ||||||||||| |||| || || |||||| |||||||| | |||||||||||| |||| Sbjct: 387 cttcttcagctgcgtcaggatattctccatggtgtactccctctgccagtttgccagcat 328 Query: 385 actgaacttctt 396 | ||||||||| Sbjct: 327 atggaacttctt 316 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 476 gggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggacagtattg 535 |||||||||||||| || || |||||||||||||||||||| ||||| || |||| ||| Sbjct: 236 gggtagtccttgtcgcagaagagcttcagctggtagatgcgcccctcgtgcacagagttg 177 Query: 536 tgaggaccaataatggtgccagtccatgaccgcatg 571 | || ||||| || ||||| ||||| || |||||| Sbjct: 176 agtggtccaatgattgtgccggtccaggagcgcatg 141
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 265 ctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgccatgtc 324 ||||||||| ||||||||||||||||| || ||||||||| | || | ||| ||||| || Sbjct: 35012558 ctagaagaaggtcccttctggaggctgaaccagcttgcggctgtgcggcgcggccatctc 35012499 Query: 325 tttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgctagcac 384 ||||||||||| |||| || || |||||| |||||||| | |||||||||||| |||| Sbjct: 35012498 cttcttcagctgcgtcaggatattctccatggtgtactccctctgccagtttgccagcat 35012439 Query: 385 actgaacttctt 396 | ||||||||| Sbjct: 35012438 atggaacttctt 35012427 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 476 gggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctc 522 |||||||||||||| || || |||||||||||||||||||| ||||| Sbjct: 35011371 gggtagtccttgtcgcagaagagcttcagctggtagatgcgcccctc 35011325
>dbj|AK066799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077E20, full insert sequence Length = 813 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 265 ctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgccatgtc 324 ||||||||| ||||||||||||||||| || ||||||||| | || | ||| ||||| || Sbjct: 460 ctagaagaaggtcccttctggaggctgaaccagcttgcggctgtgcggcgcggccatctc 401 Query: 325 tttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgctagcac 384 ||||||||||| |||| || || |||||| |||||||| | |||||||||||| |||| Sbjct: 400 cttcttcagctgcgtcaggatattctccatggtgtactccctctgccagtttgccagcat 341 Query: 385 actgaacttctt 396 | ||||||||| Sbjct: 340 atggaacttctt 329 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 476 gggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctcatggacagtattg 535 |||||||||||||| || || |||||||||||||||||||| ||||| || |||| ||| Sbjct: 249 gggtagtccttgtcgcagaagagcttcagctggtagatgcgcccctcgtgcacagagttg 190 Query: 536 tgaggaccaataatggtgccagtccatgaccgcatg 571 | || ||||| || ||||| ||||| || |||||| Sbjct: 189 agtggtccaatgattgtgccggtccaggagcgcatg 154
>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 265 ctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgccatgtc 324 ||||||||| ||||||||||||||||| || ||||||||| | || | ||| ||||| || Sbjct: 44305 ctagaagaaggtcccttctggaggctgaaccagcttgcggctgtgcggcgcggccatctc 44246 Query: 325 tttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgctagcac 384 ||||||||||| |||| || || |||||| |||||||| | |||||||||||| |||| Sbjct: 44245 cttcttcagctgcgtcaggatattctccatggtgtactccctctgccagtttgccagcat 44186 Query: 385 actgaacttctt 396 | ||||||||| Sbjct: 44185 atggaacttctt 44174 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 476 gggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctc 522 |||||||||||||| || || |||||||||||||||||||| ||||| Sbjct: 43119 gggtagtccttgtcgcagaagagcttcagctggtagatgcgcccctc 43073
>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/132 (84%) Strand = Plus / Minus Query: 265 ctagaagaatgtcccttctggaggctgcactagcttgcggttctgggtcgctgccatgtc 324 ||||||||| ||||||||||||||||| || ||||||||| | || | ||| ||||| || Sbjct: 71608 ctagaagaaggtcccttctggaggctgaaccagcttgcggctgtgcggcgcggccatctc 71549 Query: 325 tttcttcagctgggtcaagacatgctccattgtgtactctcgctgccagtttgctagcac 384 ||||||||||| |||| || || |||||| |||||||| | |||||||||||| |||| Sbjct: 71548 cttcttcagctgcgtcaggatattctccatggtgtactccctctgccagtttgccagcat 71489 Query: 385 actgaacttctt 396 | ||||||||| Sbjct: 71488 atggaacttctt 71477 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 476 gggtagtccttgtcacaaaacagcttcagctggtagatgcgaccctc 522 |||||||||||||| || || |||||||||||||||||||| ||||| Sbjct: 70421 gggtagtccttgtcgcagaagagcttcagctggtagatgcgcccctc 70375
>ref|NM_105734.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G70660 mRNA, complete cds Length = 838 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 528 cagtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcat 587 ||||||| |||||||||| |||||| |||||||| || |||| | || |||||||||| Sbjct: 332 cagtattatgaggaccaagaatggtaccagtccaagattgcatcaaaatatcatcagcat 273 Query: 588 catccattccatagctgacagttccatctccaatgcccttctc 630 ||||||||||||| || || || ||||||||||| || ||||| Sbjct: 272 catccattccataactcactgtcccatctccaattcctttctc 230
>gb|BT004943.1| Arabidopsis thaliana clone U20398 putative E2, ubiquitin-conjugating enzyme (At1g70660) mRNA, complete cds Length = 511 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 528 cagtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcat 587 ||||||| |||||||||| |||||| |||||||| || |||| | || |||||||||| Sbjct: 172 cagtattatgaggaccaagaatggtaccagtccaagattgcatcaaaatatcatcagcat 113 Query: 588 catccattccatagctgacagttccatctccaatgcccttctc 630 ||||||||||||| || || || ||||||||||| || ||||| Sbjct: 112 catccattccataactcactgtcccatctccaattcctttctc 70
>gb|BT004011.1| Arabidopsis thaliana clone RAFL14-86-C24 (R20398) putative E2, ubiquitin-conjugating enzyme (At1g70660) mRNA, complete cds Length = 827 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 528 cagtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcat 587 ||||||| |||||||||| |||||| |||||||| || |||| | || |||||||||| Sbjct: 317 cagtattatgaggaccaagaatggtaccagtccaagattgcatcaaaatatcatcagcat 258 Query: 588 catccattccatagctgacagttccatctccaatgcccttctc 630 ||||||||||||| || || || ||||||||||| || ||||| Sbjct: 257 catccattccataactcactgtcccatctccaattcctttctc 215
>gb|AY088344.1| Arabidopsis thaliana clone 5821 mRNA, complete sequence Length = 815 Score = 77.8 bits (39), Expect = 4e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 528 cagtattgtgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcat 587 ||||||| |||||||||| |||||| |||||||| || |||| | || |||||||||| Sbjct: 309 cagtattatgaggaccaagaatggtaccagtccaagattgcatcaaaatatcatcagcat 250 Query: 588 catccattccatagctgacagttccatctccaatgcccttctc 630 ||||||||||||| || || || ||||||||||| || ||||| Sbjct: 249 catccattccataactcactgtcccatctccaattcctttctc 207
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete sequence Length = 108582 Score = 69.9 bits (35), Expect = 1e-08 Identities = 80/95 (84%) Strand = Plus / Plus Query: 536 tgaggaccaataatggtgccagtccatgaccgcatgtatatgtcatcagcatcatccatt 595 |||||||||| |||||| |||||||| || |||| | || |||||||||||||||||| Sbjct: 63495 tgaggaccaagaatggtaccagtccaagattgcatcaaaatatcatcagcatcatccatt 63554 Query: 596 ccatagctgacagttccatctccaatgcccttctc 630 ||||| || || || ||||||||||| || ||||| Sbjct: 63555 ccataactcactgtcccatctccaattcctttctc 63589
>gb|DQ455302.1| Medicago truncatula cDNA-AFLP fragment BT12M22_236 sequence Length = 215 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 278 ccttctggaggctgcactagcttgcggttctgggtcgctgccatgtctttcttcagctgg 337 |||||||||||||| || ||||| ||||| || | |||||||| ||||||||||||||| Sbjct: 70 ccttctggaggctggacaagcttccggttatgaggggctgccatttctttcttcagctgg 129 Query: 338 gtcaagacatgctccattgtgtactctcgctgccagtttgc 378 |||| | || |||||| ||||||||| ||||| ||||| Sbjct: 130 gtcagtatatcctccatgctgtactctctttgccaatttgc 170
>gb|AY062935.1| Chlamydomonas reinhardtii ubiquitin-conjugating enzyme E2 isoform (UBCX) mRNA, complete cds Length = 1007 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 605 acagttccatctccaatgcccttctccccgcgctcaagctcttctagcagcctgaag 661 ||||||||||| |||| ||||||||| ||||| || ||||| || |||||||||||| Sbjct: 150 acagttccatcaccaaagcccttctcgccgcgatccagctcctccagcagcctgaag 94
>emb|AJ617084.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np285 Length = 346 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 350 tccattgtgtactctcgctgccagtttgc 378 ||||||||||||||||||||||| ||||| Sbjct: 258 tccattgtgtactctcgctgccaatttgc 286
>gb|DQ267678.1| Tricholoma vaccinum isolate GK6514 ubiquitin-conjugating enzyme variant MMS2-like mRNA, partial sequence Length = 229 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 590 tccattccatagctgacagttccatctccaa 620 |||||||||||||||||||| ||||| |||| Sbjct: 16 tccattccatagctgacagtcccatcaccaa 46
>gb|AC146508.3| Pan troglodytes BAC clone RP43-172A15 from 7, complete sequence Length = 208067 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 aatgtcccttctggaggctgc 292 ||||||||||||||||||||| Sbjct: 72407 aatgtcccttctggaggctgc 72427
>gb|AC163393.6| Mus musculus chromosome 15, clone RP24-224P8, complete sequence Length = 167152 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 429 aagccatgttgattcttgaatggaa 453 ||||||| ||||||||||||||||| Sbjct: 107889 aagccattttgattcttgaatggaa 107865
>gb|AC107775.9| Mus musculus chromosome 15, clone RP23-93N2, complete sequence Length = 169604 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 429 aagccatgttgattcttgaatggaa 453 ||||||| ||||||||||||||||| Sbjct: 157750 aagccattttgattcttgaatggaa 157774
>emb|AL359458.17| Human DNA sequence from clone RP11-719J20 on chromosome 6, complete sequence Length = 96151 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 aaacacatattatatttcctt 25 ||||||||||||||||||||| Sbjct: 2735 aaacacatattatatttcctt 2715
>gb|AC034268.4| Homo sapiens chromosome 17, clone RP11-312B18, complete sequence Length = 198935 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 aaagatctgcaggcagcagac 179 ||||||||||||||||||||| Sbjct: 48275 aaagatctgcaggcagcagac 48295
>ref|XM_627982.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd1_1400), partial mRNA Length = 2889 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 135 aacaggtttcacataaaactgggaaaaga 163 |||| ||||| |||||||||||||||||| Sbjct: 1408 aacatgtttcgcataaaactgggaaaaga 1380
>emb|AL670943.14| Mouse DNA sequence from clone RP23-233G6 on chromosome X, complete sequence Length = 197148 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 ccttgtcacaaaacagcttca 503 ||||||||||||||||||||| Sbjct: 74488 ccttgtcacaaaacagcttca 74468
>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome Length = 1469720 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 aaacagcttcagctggtaga 512 |||||||||||||||||||| Sbjct: 559235 aaacagcttcagctggtaga 559254
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 gttgtttcttcaattacaga 52 |||||||||||||||||||| Sbjct: 811223 gttgtttcttcaattacaga 811204
>gb|AC104642.11| Trypanosoma brucei chromosome 3 clone RPCI93-27C5, complete sequence Length = 126762 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 gttgtttcttcaattacaga 52 |||||||||||||||||||| Sbjct: 120171 gttgtttcttcaattacaga 120152
>gb|AC159446.1| Trypanosoma brucei chromosome 3 clone RPCI93-3K10, complete sequence Length = 91751 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 gttgtttcttcaattacaga 52 |||||||||||||||||||| Sbjct: 17669 gttgtttcttcaattacaga 17650
>gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0065H03, complete sequence Length = 141017 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 tgtatatgtcatcagcatca 589 |||||||||||||||||||| Sbjct: 84715 tgtatatgtcatcagcatca 84734
>ref|XM_422845.1| PREDICTED: Gallus gallus similar to KIAA0669 gene product (LOC425043), mRNA Length = 2642 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 attccatagctgacagttcc 612 |||||||||||||||||||| Sbjct: 722 attccatagctgacagttcc 741
>gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, complete sequence Length = 244656 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 aagatctgcaggcagcagac 179 |||||||||||||||||||| Sbjct: 220818 aagatctgcaggcagcagac 220799
>gb|AY303814.1| Takifugu rubripes IFI56 (IFI56) gene, complete cds Length = 6404 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 agatcgctgctgttggaactggag 239 ||||||||| |||||||||||||| Sbjct: 6026 agatcgctgttgttggaactggag 6003
>ref|XM_820550.1| Trypanosoma brucei TREU927 clone RPCI93-27C5 hypothetical protein (Tb927.3.3150) partial mRNA Length = 2358 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gttgtttcttcaattacaga 52 |||||||||||||||||||| Sbjct: 876 gttgtttcttcaattacaga 895
>emb|BX950853.16| Zebrafish DNA sequence from clone DKEY-25L21 in linkage group 17, complete sequence Length = 214513 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tgtactctcgctgccagttt 376 |||||||||||||||||||| Sbjct: 88561 tgtactctcgctgccagttt 88580
>gb|AC157766.4| Mus musculus chromosome 1, clone RP24-318F24, complete sequence Length = 145303 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 aagatctgcaggcagcagac 179 |||||||||||||||||||| Sbjct: 145053 aagatctgcaggcagcagac 145072
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 tgtatatgtcatcagcatca 589 |||||||||||||||||||| Sbjct: 480541 tgtatatgtcatcagcatca 480560
>gb|AC104322.4| Oryza sativa chromosome 10 BAC OSJNBb0005F01 genomic sequence, complete sequence Length = 151428 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 tgtatatgtcatcagcatca 589 |||||||||||||||||||| Sbjct: 101307 tgtatatgtcatcagcatca 101326
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 ttgtcacaaaacagcttcag 504 |||||||||||||||||||| Sbjct: 21454 ttgtcacaaaacagcttcag 21435
>gb|AC105221.3| Homo sapiens chromosome 18, clone RP11-480N3, complete sequence Length = 165396 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 gggttgtttcttcaattaca 50 |||||||||||||||||||| Sbjct: 52923 gggttgtttcttcaattaca 52942
>dbj|AB224400.1| Aspergillus oryzae cDNA, contig sequence: AoEST1245 Length = 1232 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 512 atgcgaccctcatggacagt 531 |||||||||||||||||||| Sbjct: 1076 atgcgaccctcatggacagt 1057
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 atgcgaccctcatggacagt 531 |||||||||||||||||||| Sbjct: 2404999 atgcgaccctcatggacagt 2405018
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 tgtatatgtcatcagcatca 589 |||||||||||||||||||| Sbjct: 6165902 tgtatatgtcatcagcatca 6165921 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 tgtatatgtcatcagcatca 589 |||||||||||||||||||| Sbjct: 480541 tgtatatgtcatcagcatca 480560
>gb|AC008073.4| Homo sapiens BAC clone RP11-507M3 from 2, complete sequence Length = 166660 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aaaactgggaaaagatctgc 168 |||||||||||||||||||| Sbjct: 154557 aaaactgggaaaagatctgc 154538
>gb|AC009891.2|AC009891 Genomic Sequence for Homo sapiens clone H_NH0332F09, Chromosome 18, complete sequence Length = 194673 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gggttgtttcttcaattaca 50 |||||||||||||||||||| Sbjct: 194305 gggttgtttcttcaattaca 194286
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 tgtatatgtcatcagcatca 589 |||||||||||||||||||| Sbjct: 6167488 tgtatatgtcatcagcatca 6167507 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 tgtatatgtcatcagcatca 589 |||||||||||||||||||| Sbjct: 480538 tgtatatgtcatcagcatca 480557
>gb|AC005279.1|AC005279 Homo sapiens chromosome 17, clone hRPK.103_M_22, complete sequence Length = 151429 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 aagatctgcaggcagcagac 179 |||||||||||||||||||| Sbjct: 36149 aagatctgcaggcagcagac 36130
>emb|AL772211.7| Mouse DNA sequence from clone RP23-473B24 on chromosome 4, complete sequence Length = 189040 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 606 cagttccatctccaatgccc 625 |||||||||||||||||||| Sbjct: 184874 cagttccatctccaatgccc 184855 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,141,967 Number of Sequences: 3902068 Number of extensions: 6141967 Number of successful extensions: 108038 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107503 Number of HSP's gapped (non-prelim): 523 length of query: 661 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 638 effective length of database: 17,143,297,704 effective search space: 10937423935152 effective search space used: 10937423935152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)