ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd19n16 |
|---|---|
| Clone Library Name | barley_pub |
>CLIC1_MOUSE (Q9Z1Q5) Chloride intracellular channel protein 1 (Nuclear chloride| ion channel 27) (NCC27) Length = 240 Score = 53.1 bits (126), Expect = 6e-07 Identities = 26/79 (32%), Positives = 43/79 (54%) Frame = -1 Query: 579 VDELQALEEHLKAHGPYINGANVSAADLSLAPKLFHLQVALEHFKGWKVPETLTSVHAYT 400 VDE A +E + +++G ++ AD +L PKL +QV + ++G+ +PE VH Y Sbjct: 151 VDETSAEDEGISQR-KFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYL 209 Query: 399 EALFSRESFVKTKPTKENL 343 ++RE F T P E + Sbjct: 210 SNAYAREEFASTCPDDEEI 228
>CLIC1_HUMAN (O00299) Chloride intracellular channel protein 1 (Nuclear chloride| ion channel 27) (NCC27) (Chloride channel ABP) (Regulatory nuclear chloride ion channel protein) (hRNCC) Length = 240 Score = 53.1 bits (126), Expect = 6e-07 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 17/104 (16%) Frame = -1 Query: 603 SDGSEKALVDELQALEEHLKAHGP-----------------YINGANVSAADLSLAPKLF 475 +D EK L+ L+ L+ +L + P +++G ++ AD +L PKL Sbjct: 125 NDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLPKLH 184 Query: 474 HLQVALEHFKGWKVPETLTSVHAYTEALFSRESFVKTKPTKENL 343 +QV + ++G+ +PE VH Y ++RE F T P E + Sbjct: 185 IVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEI 228
>CLIC1_RABIT (Q95MF9) Chloride intracellular channel protein 1| Length = 240 Score = 50.8 bits (120), Expect = 3e-06 Identities = 26/79 (32%), Positives = 42/79 (53%) Frame = -1 Query: 579 VDELQALEEHLKAHGPYINGANVSAADLSLAPKLFHLQVALEHFKGWKVPETLTSVHAYT 400 VDE A +E + +++G ++ AD +L PKL +QV + +G+ +PE VH Y Sbjct: 151 VDETSAEDEGISQR-KFLDGNELTLADCNLLPKLHIVQVVCKKNRGFTIPEVFRGVHRYL 209 Query: 399 EALFSRESFVKTKPTKENL 343 ++RE F T P E + Sbjct: 210 SNAYAREEFASTCPDDEEI 228
>CLIC4_HUMAN (Q9Y696) Chloride intracellular channel protein 4 (Intracellular| chloride ion channel protein p64H1) Length = 252 Score = 47.8 bits (112), Expect = 3e-05 Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Frame = -1 Query: 609 DASDGSEKALVDELQALEEHLKAHGP-----------------YINGANVSAADLSLAPK 481 +A++ E+ L+ LQ L+E+L + P +++G ++ AD +L PK Sbjct: 134 EANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPK 193 Query: 480 LFHLQVALEHFKGWKVPETLTSVHAYTEALFSRESFVKTKPTKENL 343 L ++V + ++ + +P+ +T + Y +SR+ F T P+ + + Sbjct: 194 LHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEV 239
>CLIC4_RAT (Q9Z0W7) Chloride intracellular channel protein 4 (Intracellular| chloride ion channel protein p64H1) Length = 252 Score = 47.4 bits (111), Expect = 3e-05 Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Frame = -1 Query: 609 DASDGSEKALVDELQALEEHLKAHGP-----------------YINGANVSAADLSLAPK 481 +A++ E+ L+ LQ L+E+L + P +++G ++ AD +L PK Sbjct: 134 EANEALERGLLKTLQKLDEYLNSPLPGEIDENSMEDIKSSTRRFLDGDEMTLADCNLLPK 193 Query: 480 LFHLQVALEHFKGWKVPETLTSVHAYTEALFSRESFVKTKPTKENL 343 L ++V + ++ + +P+ +T + Y +SR+ F T P+ + + Sbjct: 194 LHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEV 239
>CLIC4_MOUSE (Q9QYB1) Chloride intracellular channel protein 4 (mc3s5/mtCLIC)| Length = 252 Score = 47.4 bits (111), Expect = 3e-05 Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 17/106 (16%) Frame = -1 Query: 609 DASDGSEKALVDELQALEEHLKAHGP-----------------YINGANVSAADLSLAPK 481 +A++ E+ L+ LQ L+E+L + P +++G ++ AD +L PK Sbjct: 134 EANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPK 193 Query: 480 LFHLQVALEHFKGWKVPETLTSVHAYTEALFSRESFVKTKPTKENL 343 L ++V + ++ + +P+ +T + Y +SR+ F T P+ + + Sbjct: 194 LHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEV 239
>CLIC4_BOVIN (Q9XSA7) Chloride intracellular channel protein 4 (Intracellular| chloride ion channel protein p64H1) (Fragment) Length = 158 Score = 47.0 bits (110), Expect = 4e-05 Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 17/106 (16%) Frame = -1 Query: 609 DASDGSEKALVDELQALEEHLKAHGP-----------------YINGANVSAADLSLAPK 481 + ++ E+ L+ LQ L+E+L + P +++G ++ AD +L PK Sbjct: 40 ERNEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPK 99 Query: 480 LFHLQVALEHFKGWKVPETLTSVHAYTEALFSRESFVKTKPTKENL 343 L ++V + ++ + +PE +T + Y +SR+ F T P+ + + Sbjct: 100 LHIVKVVAKKYRNFDIPEGMTGIWRYLTNAYSRDEFTNTCPSDKEV 145
>CLIC3_MOUSE (Q9D7P7) Chloride intracellular channel protein 3| Length = 237 Score = 47.0 bits (110), Expect = 4e-05 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%) Frame = -1 Query: 600 DGSEKALVDELQALEEHLK-AHGPYINGANVSAADLSLAPKLFHLQVALEHFKGWKVPET 424 D +A +D A E HL+ +H +++G + AD SL PKL + HF+ +P Sbjct: 140 DSYLRAPLDHELAQEPHLRESHRRFLDGDQFTLADCSLLPKLHIVDTVCAHFRQLPIPAE 199 Query: 423 LTSVHAYTEALFSRESFVKTKPTKENLIAGW 331 L+ V Y ++ ++ F T P ++A + Sbjct: 200 LSCVRRYLDSALQKKEFKYTCPHSAEILAAY 230
>CLIC3_HUMAN (O95833) Chloride intracellular channel protein 3| Length = 236 Score = 38.9 bits (89), Expect = 0.012 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = -1 Query: 531 YINGANVSAADLSLAPKLFHLQVALEHFKGWKVPETLTSVHAYTEALFSRESFVKTKPTK 352 +++G ++ AD SL PKL + HF+ +P L V Y ++ + F T P Sbjct: 163 FLDGDRLTLADCSLLPKLHIVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHS 222 Query: 351 ENLIAGW 331 ++A + Sbjct: 223 AEILAAY 229
>ZAP1_YEAST (P47043) Zinc-responsive transcriptional regulator ZAP1| Length = 880 Score = 34.3 bits (77), Expect = 0.30 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%) Frame = +2 Query: 35 PPHTIKGSHHNTCTPLTAPPEHTHHN---HTHKPGRGQTVHAASARLRQAEHTAEARSHY 205 P + + GS++NT + +H HH H+HKP R V+ ++ + A TA+ ++ Sbjct: 440 PKNNLNGSNNNTAGATSTDHQHHHHRIQFHSHKPNRNNIVN--NSGISAANTTADLTNND 497 Query: 206 SKPRSTMRPSYRR 244 + SY R Sbjct: 498 LNDLISREYSYER 510
>PLCL4_HUMAN (O75038) 1-phosphatidylinositol-4,5-bisphosphate| phosphodiesterase-like 4 (EC 3.1.4.11) (Phosphoinositide phospholipase C-like 4) (Phospholipase C-like 4) (Fragment) Length = 1182 Score = 32.7 bits (73), Expect = 0.87 Identities = 20/58 (34%), Positives = 23/58 (39%) Frame = +3 Query: 300 AGELTGSPSAPTRRSGSPWSAWS*RTTRG*REPRCRHGRWSVFQGPSSL*SAPGQPGG 473 AG+ G SA R+G P S W G RC GR + PG PGG Sbjct: 5 AGQRVGLRSAWALRAGCPCSGWGSGDAGGQHRARCPSGRAGNWDWHPPAMEEPGPPGG 62
>ACES_HUMAN (P22303) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)| Length = 614 Score = 32.3 bits (72), Expect = 1.1 Identities = 17/40 (42%), Positives = 18/40 (45%) Frame = -3 Query: 574 RAAGTGRAPKGPWTLYQRGECLRRGSQLGSEALPPPGCPG 455 RA AP GPW GE RR +QL PPG G Sbjct: 255 RAVLQSGAPNGPWATVGMGEARRRATQLAHLVGCPPGGTG 294
>CREA_GIBFU (O94131) DNA-binding protein creA (Carbon catabolite repressor)| Length = 420 Score = 32.0 bits (71), Expect = 1.5 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = +2 Query: 80 LTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEHTAEARSHYSKPRS 220 LTAPP H++ NH H P G +H++ L RSH ++ S Sbjct: 215 LTAPPHHSN-NHRHHPYFGHGMHSSRGHLPTLSSYHMGRSHSNEDPS 260
>SSPA_HAEIN (P45207) Stringent starvation protein A homolog| Length = 212 Score = 31.6 bits (70), Expect = 1.9 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 6/87 (6%) Frame = -1 Query: 606 ASDGSEKALVDELQALEEHLKAHGP------YINGANVSAADLSLAPKLFHLQVALEHFK 445 A +G+EK L+ L+E L P Y D +AP L+ L+ F Sbjct: 117 AENGTEKEKTSALKQLKEELLGIAPIFQQMPYFMNEEFGLVDCYVAPLLWKLKHLGVEFT 176 Query: 444 GWKVPETLTSVHAYTEALFSRESFVKT 364 G ++ AY E +F+R+SF+++ Sbjct: 177 G----TGSKAIKAYMERVFTRDSFLQS 199
>OPA_DROME (P39768) Pair-rule protein odd-paired| Length = 609 Score = 31.6 bits (70), Expect = 1.9 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +2 Query: 77 PLTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEH 181 PL PP H HH H H+ AASA + H Sbjct: 522 PLGPPPSHHHHPHHHQAAPSPGAAAASASMLHHNH 556
>ACES_RABIT (Q29499) Acetylcholinesterase precursor (EC 3.1.1.7) (AChE)| (Fragment) Length = 584 Score = 30.8 bits (68), Expect = 3.3 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -3 Query: 574 RAAGTGRAPKGPWTLYQRGECLRRGSQLGSEALPPPGCPG 455 RA AP GPW GE RR + L + PPG G Sbjct: 225 RAVLQSGAPNGPWATVGVGEARRRATLLARLVVCPPGGAG 264
>MAAI_CAEEL (Q18938) Probable maleylacetoacetate isomerase (EC 5.2.1.2) (MAAI)| Length = 214 Score = 30.8 bits (68), Expect = 3.3 Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 4/50 (8%) Frame = -1 Query: 612 KDASDGSEKA---LVDELQALEEHLKAH-GPYINGANVSAADLSLAPKLF 475 K+A G + A +V+ L ALE LK H G Y G +V+ ADLS+ P ++ Sbjct: 122 KEAGFGGQFAKQFVVEGLTALEILLKQHSGKYAVGDDVTIADLSIPPLIY 171
>PURA_SCHPO (Q02787) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 434 Score = 30.4 bits (67), Expect = 4.3 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = -1 Query: 579 VDELQALEEHLKAHGPYINGANVSAADLSLAPKLFHLQVALEHFKGWKVPET 424 +D L AL+E A ING + L L ++ E F GWKVP T Sbjct: 341 LDILDALDEIKVAVAYIINGKRIETFPADL-DSLEEAEIVYETFPGWKVPTT 391
>YIBF_ECOLI (P0ACA1) Hypothetical GST-like protein yibF| Length = 202 Score = 30.0 bits (66), Expect = 5.7 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 4/93 (4%) Frame = -1 Query: 618 KSKDASDGSEKALVDELQALEEHLKAHGPYINGANVSAADLSLAPKLFHLQVALEHFK-- 445 +++ A+ SE L+ + + + L Y+ + ++LA V +F+ Sbjct: 111 QARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIACAVGYLNFRRV 170 Query: 444 --GWKVPETLTSVHAYTEALFSRESFVKTKPTK 352 GW V + E LFSRESF +T+P K Sbjct: 171 APGWCVDRP--HLVKLVENLFSRESFARTEPPK 201
>YIBF_ECOL6 (P0ACA2) Hypothetical GST-like protein yibF| Length = 202 Score = 30.0 bits (66), Expect = 5.7 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 4/93 (4%) Frame = -1 Query: 618 KSKDASDGSEKALVDELQALEEHLKAHGPYINGANVSAADLSLAPKLFHLQVALEHFK-- 445 +++ A+ SE L+ + + + L Y+ + ++LA V +F+ Sbjct: 111 QARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIACAVGYLNFRRV 170 Query: 444 --GWKVPETLTSVHAYTEALFSRESFVKTKPTK 352 GW V + E LFSRESF +T+P K Sbjct: 171 APGWCVDRP--HLVKLVENLFSRESFARTEPPK 201
>TAAR5_PANTR (Q5QD28) Trace amine-associated receptor 5| Length = 337 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -1 Query: 501 DLSLAPKLFHLQVALEHF-KGWKVPETLTSVHAYTEALFSRES 376 D L P F ++VAL + GW VP TS+ YT+ + +R S Sbjct: 138 DPLLYPSKFTVRVALRYILAGWGVPAAYTSLFLYTDVVETRLS 180
>TAAR5_HUMAN (O14804) Trace amine-associated receptor 5 (Putative| neurotransmitter receptor) Length = 337 Score = 30.0 bits (66), Expect = 5.7 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -1 Query: 501 DLSLAPKLFHLQVALEHF-KGWKVPETLTSVHAYTEALFSRES 376 D L P F ++VAL + GW VP TS+ YT+ + +R S Sbjct: 138 DPLLYPSKFTVRVALRYILAGWGVPAAYTSLFLYTDVVETRLS 180
>YH17_YEAST (P38898) Hypothetical 17.1 kDa protein in PUR5 3'region| Length = 153 Score = 30.0 bits (66), Expect = 5.7 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +2 Query: 38 PHTIKGSHHNTCTPLTAPPEHTHHNHT 118 PHT +H +T TP P HT H HT Sbjct: 30 PHTPTHTHPHTPTPTPHPHPHTPHPHT 56
>PHBC_RHIET (Q52728) Poly-beta-hydroxybutyrate polymerase (EC 2.3.1.-)| (Poly(3-hydroxybutyrate) polymerase) (PHB polymerase) (PHB synthase) (Poly(3-hydroxyalkanoate) polymerase) (PHA polymerase) (PHA synthase) (Polyhydroxyalkanoic acid synthase) Length = 636 Score = 30.0 bits (66), Expect = 5.7 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 11/97 (11%) Frame = -1 Query: 597 GSEKALVDE--LQALEEHLKAHGPYINGANVSAA-DLSLAPKLFHLQVALEHFKGWK-VP 430 G K VDE L ALEEH++A G Y++G+ +S A ++ A +L + KG + +P Sbjct: 410 GDLKVFVDEEQLAALEEHMQAAG-YLDGSKMSMAFNMLRASELIWPYFVNSYLKGQEPLP 468 Query: 429 ETL-------TSVHAYTEALFSRESFVKTKPTKENLI 340 L T + A A + R +++ T+ +I Sbjct: 469 FDLLFWNADSTRMAAANHAFYLRNCYLRNALTQNEMI 505
>MATK_MOUSE (P41242) Megakaryocyte-associated tyrosine-protein kinase (EC| 2.7.10.2) (Tyrosine-protein kinase CTK) (Protein kinase NTK) Length = 505 Score = 30.0 bits (66), Expect = 5.7 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -3 Query: 559 GRAPKGPWTLYQRGECLRRGSQLGSEALPPPGCPGALQRLEG 434 GRAP +L + E + +G ++ PP GCPG++ L G Sbjct: 419 GRAPYPKMSLKEVSEAVEKGYRME----PPDGCPGSVHTLMG 456
>ASR_ECOLI (P36560) Acid shock protein precursor| Length = 102 Score = 30.0 bits (66), Expect = 5.7 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 7/61 (11%) Frame = +2 Query: 74 TPLTAPPEHTHHNHTHKPGRGQTVHAA-------SARLRQAEHTAEARSHYSKPRSTMRP 232 T AP + THH HK Q AA A + E A+A ++K S +P Sbjct: 34 TTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAKKHSHQQP 93 Query: 233 S 235 + Sbjct: 94 A 94
>ASR_ECOL6 (Q8CW15) Acid shock protein precursor| Length = 102 Score = 30.0 bits (66), Expect = 5.7 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 7/61 (11%) Frame = +2 Query: 74 TPLTAPPEHTHHNHTHKPGRGQTVHA-------ASARLRQAEHTAEARSHYSKPRSTMRP 232 T AP + THH HK Q A A A + E A+A ++K S +P Sbjct: 34 TTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNAKAEQKAPEQKAQAAKKHAKKHSHQQP 93 Query: 233 S 235 + Sbjct: 94 A 94
>ASR_ECO57 (Q8X783) Acid shock protein precursor| Length = 102 Score = 30.0 bits (66), Expect = 5.7 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 7/61 (11%) Frame = +2 Query: 74 TPLTAPPEHTHHNHTHKPGRGQTVHAA-------SARLRQAEHTAEARSHYSKPRSTMRP 232 T AP + THH HK Q AA A + E A+A ++K S +P Sbjct: 34 TTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAKKHSHQQP 93 Query: 233 S 235 + Sbjct: 94 A 94
>TRA1_DROME (Q8I8U7) Transcription-associated protein 1 (dTRA1)| Length = 3805 Score = 29.6 bits (65), Expect = 7.4 Identities = 25/98 (25%), Positives = 42/98 (42%) Frame = +1 Query: 319 HLRRPPGDQVLLGRLGLDERLAAEESLGVGMDAGQCFRDLPAFEVLQGNLEVEELRSQAE 498 H+R+ VL+ + L + +ESL VG+ C L + L+ + E E RS+A Sbjct: 442 HVRQSLNIDVLIKAVNLFSKNVHDESLAVGIQTMSCKLLLNLVDCLRHHSETEPQRSKAL 501 Query: 499 IRGGDIRPVDIGSMGL*VLFQCLQLVNKCLLRAIAGVL 612 + + V + Q ++ KC A +G L Sbjct: 502 L--SKLLKVFVKKFETIAKIQLPLIIQKCKGHAFSGAL 537
>QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)| Length = 387 Score = 29.6 bits (65), Expect = 7.4 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +2 Query: 56 SHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEHTA 187 SHHN+ P H HH+H H P Q A+A + E A Sbjct: 37 SHHNS-----HHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75
>FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (CBF-1) (Proto-oncogene C-QIN) (N-62-5) (CEQ 3-1) Length = 451 Score = 29.6 bits (65), Expect = 7.4 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +2 Query: 56 SHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEHTA 187 SHHN+ P H HH+H H P Q A+A + E A Sbjct: 37 SHHNS-----HHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 29.6 bits (65), Expect = 7.4 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Frame = +2 Query: 98 HTHHNHTHKPGR--GQTVHAASARLRQAEHTAEAR 196 H HH+H H PGR G+ SAR R+ A R Sbjct: 2219 HHHHHHHHHPGRGPGRVSPGVSARRRRRGPVARVR 2253
>RT18B_HUMAN (Q9Y676) 28S ribosomal protein S18b, mitochondrial precursor| (MRP-S18-b) (Mrps18b) (MRP-S18-2) Length = 258 Score = 29.3 bits (64), Expect = 9.7 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = +3 Query: 231 QATDEALLL---PSLLAQRVVFSERRAGELTGSPSAPTRRSGSPWSAW 365 +A D LL+ P + + + FS G ++ +P APT SG PW W Sbjct: 156 KARDHGLLIYHIPQVEPRDLDFSTSH-GAVSATPPAPTLVSGDPWYPW 202
>EDN2_HUMAN (P20800) Endothelin-2 precursor (ET-2) (Preproendothelin-2) (PPET2)| Length = 178 Score = 29.3 bits (64), Expect = 9.7 Identities = 19/59 (32%), Positives = 25/59 (42%) Frame = +3 Query: 243 EALLLPSLLAQRVVFSERRAGELTGSPSAPTRRSGSPWSAWS*RTTRG*REPRCRHGRW 419 EA +PS + VF + G TG R + S ++ R REPR H RW Sbjct: 117 EAGAVPSRKSPADVFQTGKTGATTGELLQRLRDISTVKSLFAKRQQEAMREPRSTHSRW 175
>ACHB_HUMAN (P11230) Acetylcholine receptor protein, beta subunit precursor| Length = 501 Score = 29.3 bits (64), Expect = 9.7 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 408 HGRWSVFQGPSSL*SAPGQPGGGR 479 +G+W + PS L PG P GGR Sbjct: 205 NGQWEIIHKPSRLIQPPGDPRGGR 228
>GSTZ1_DIACA (P28342) Glutathione S-transferase 1 (EC 2.5.1.18) (SR8) (GST| class-zeta) Length = 221 Score = 29.3 bits (64), Expect = 9.7 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = -1 Query: 564 ALEEHLKAH-GPYINGANVSAADLSLAPKL 478 ALE+ LK H G Y G V ADL LAP++ Sbjct: 146 ALEKLLKGHAGKYATGDEVGLADLFLAPQI 175
>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor| Length = 4010 Score = 29.3 bits (64), Expect = 9.7 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 5/33 (15%) Frame = -3 Query: 214 GFGIMRASLCCVLCLSQARTC-----CVDCLPP 131 G G +A C+ C Q TC C CLPP Sbjct: 454 GLGFYQAGSLCLACQPQCSTCTNGLECSSCLPP 486
>NFYC2_ARATH (Q8LCG7) Nuclear transcription factor Y subunit C-2 (AtNF-YC-2)| (Transcriptional activator HAP5B) Length = 199 Score = 29.3 bits (64), Expect = 9.7 Identities = 12/56 (21%), Positives = 26/56 (46%) Frame = +2 Query: 35 PPHTIKGSHHNTCTPLTAPPEHTHHNHTHKPGRGQTVHAASARLRQAEHTAEARSH 202 PPH + N + + H H+H + + Q + ++++ EHT + ++H Sbjct: 20 PPHAYQSGPVNAASHMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNH 75
>GSTA3_MOUSE (P30115) Glutathione S-transferase Yc (EC 2.5.1.18) (GST| class-alpha) (Ya3) Length = 220 Score = 29.3 bits (64), Expect = 9.7 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Frame = -1 Query: 564 ALEEHLKAHGP-YINGANVSAADLSLAPKLFHLQ 466 A E+ LK+HG Y+ G +S AD++L L+H++ Sbjct: 134 AFEKVLKSHGQDYLVGNRLSRADIALVELLYHVE 167 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,780,582 Number of Sequences: 219361 Number of extensions: 1868467 Number of successful extensions: 7377 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 6665 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7270 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
