Clone Name | rbasd19n15 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_481988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 377 bits (190), Expect = e-101 Identities = 322/366 (87%) Strand = Plus / Minus Query: 207 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 266 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 267 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 326 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 327 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 386 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 387 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 446 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 447 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 506 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 507 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 566 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 567 gcggcg 572 |||||| Sbjct: 174 gcggcg 169
>dbj|AK061882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F01, full insert sequence Length = 815 Score = 377 bits (190), Expect = e-101 Identities = 322/366 (87%) Strand = Plus / Minus Query: 207 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 266 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 267 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 326 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 327 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 386 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 387 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 446 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 447 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 506 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 507 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 566 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 567 gcggcg 572 |||||| Sbjct: 174 gcggcg 169
>dbj|AK120339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060M10, full insert sequence Length = 823 Score = 377 bits (190), Expect = e-101 Identities = 322/366 (87%) Strand = Plus / Minus Query: 207 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 266 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 537 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 478 Query: 267 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 326 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 477 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 418 Query: 327 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 386 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 417 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 358 Query: 387 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 446 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 357 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 298 Query: 447 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 506 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 297 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 238 Query: 507 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 566 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 237 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 178 Query: 567 gcggcg 572 |||||| Sbjct: 177 gcggcg 172
>dbj|AK120022.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C04, full insert sequence Length = 1727 Score = 377 bits (190), Expect = e-101 Identities = 322/366 (87%) Strand = Plus / Minus Query: 207 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 266 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 267 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 326 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 327 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 386 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 387 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 446 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 447 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 506 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 507 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 566 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 567 gcggcg 572 |||||| Sbjct: 174 gcggcg 169
>gb|BT018329.1| Zea mays clone EL01T0208G01.c mRNA sequence Length = 700 Score = 365 bits (184), Expect = 1e-97 Identities = 316/360 (87%) Strand = Plus / Minus Query: 213 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 272 ||||||| ||||||||| | ||| || |||||||||||||| ||||| ||||| | ||| Sbjct: 538 ttcttgccacgcagcttcgttcccagggccctctcgagcttgccaatgatctgctggttg 479 Query: 273 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 332 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 478 ggaattgccttgcctgactcatactcctggatcacctgtggcttctcattgatcatctga 419 Query: 333 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 392 ||||| ||||||||||||| ||||||||| |||||||||||||| || |||||||||||| Sbjct: 418 gcaagctgtgcctgggtcaacttcttatcgagccttgcttgcatgagatttttcttcagg 359 Query: 393 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 452 || |||| ||| |||||||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 358 tcacttggaactcgctcatgggcgaggttctctgtgtcatcgtcgaggcgcttggtgttg 299 Query: 453 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 512 ||||| || ||||| || || ||||||||| | |||||||| |||||||| |||| ||| Sbjct: 298 agggatgtgccgctggacgccgccttgttcataccagcgttgtacttcttcatggtctcg 239 Query: 513 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 572 ||||| |||||||||||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 238 atctccgcgccggagcggcgcgcggcgttgacggccttctcatccttcttggcagcggcg 179
>gb|AY106376.1| Zea mays PCO106666 mRNA sequence Length = 903 Score = 365 bits (184), Expect = 1e-97 Identities = 316/360 (87%) Strand = Plus / Minus Query: 213 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 272 ||||||| ||||||||| | ||| || |||||||||||||| ||||| ||||| | ||| Sbjct: 606 ttcttgccacgcagcttcgttcccagggccctctcgagcttgccaatgatctgctggttg 547 Query: 273 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 332 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ggaattgccttgcctgactcatactcctggatcacctgtggcttctcattgatcatctga 487 Query: 333 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 392 ||||| ||||||||||||| ||||||||| |||||||||||||| || |||||||||||| Sbjct: 486 gcaagctgtgcctgggtcaacttcttatcgagccttgcttgcatgagatttttcttcagg 427 Query: 393 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 452 || |||| ||| |||||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 426 tcacttggaactcgctcatgggcgaggttctctgtgtcgtcgtcgaggcgcttggtgttg 367 Query: 453 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 512 ||||| || ||||| || || ||||||||| | |||||||| ||||||| |||| ||| Sbjct: 366 agggatgtgccgctggacgccgccttgttcataccagcgttgaacttcttcatggtctcg 307 Query: 513 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 572 ||||| |||||||||||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 306 atctccgcgccggagcggcgcgcggcgttgacggccttctcatccttcttggcagcggcg 247
>gb|BT016361.1| Zea mays clone Contig194 mRNA sequence Length = 770 Score = 301 bits (152), Expect = 1e-78 Identities = 308/360 (85%) Strand = Plus / Minus Query: 213 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 272 ||||||| ||||| ||| | ||| || |||||||||||||| | ||| ||||| | ||| Sbjct: 539 ttcttgccacgcaacttggttcccagggccctctcgagcttgctaatgatctgctggttg 480 Query: 273 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 332 || || |||||||| || || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 479 gggattgccttgcctgattcatactcctgaatcacctgtggcttctcatttatcatctga 420 Query: 333 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 392 |||||||||||||| |||| ||||||||| |||||||||||||| || || |||||||| Sbjct: 419 gcaagttgtgcctgtgtcagcttcttatcgagccttgcttgcatgagattcttcttcaga 360 Query: 393 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 452 || |||| ||| |||||||||| ||||| || |||||||||||||| |||||||||||| Sbjct: 359 tcacttggaactcgctcatgggcgaggttttcggtgtcgtcgtcgaggcgcttggtgttg 300 Query: 453 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 512 ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| |||| ||| Sbjct: 299 agggatgtaccgctggatgccgccttgttcgtaccagcgttgtacttcttcatggtatcg 240 Query: 513 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 572 ||||| || |||| |||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 239 atctccgcaccggcgcggcgcgcggcgttgacggccttctcatccttcttggcggcggcg 180
>gb|AY103611.1| Zea mays PCO106667 mRNA sequence Length = 964 Score = 301 bits (152), Expect = 1e-78 Identities = 308/360 (85%) Strand = Plus / Minus Query: 213 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 272 ||||||| ||||| ||| | ||| || |||||||||||||| | ||| ||||| | ||| Sbjct: 664 ttcttgccacgcaacttggttcccagggccctctcgagcttgctaatgatctgctggttg 605 Query: 273 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 332 || || |||||||| || || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 604 gggattgccttgcctgattcatactcctgaatcacctgtggcttctcatttatcatctga 545 Query: 333 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 392 |||||||||||||| |||| ||||||||| |||||||||||||| || || |||||||| Sbjct: 544 gcaagttgtgcctgtgtcagcttcttatcgagccttgcttgcatgagattcttcttcaga 485 Query: 393 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 452 || |||| ||| |||||||||| ||||| || |||||||||||||| |||||||||||| Sbjct: 484 tcacttggaactcgctcatgggcgaggttttcggtgtcgtcgtcgaggcgcttggtgttg 425 Query: 453 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 512 ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| |||| ||| Sbjct: 424 agggatgtaccgctggatgccgccttgttcgtaccagcgttgtacttcttcatggtatcg 365 Query: 513 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 572 ||||| || |||| |||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 364 atctccgcaccggcgcggcgcgcggcgttgacggccttctcatccttcttggcggcggcg 305
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 333 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 392 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 16977492 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 16977433 Query: 393 tcgcttgaaacacgctcat 411 || ||||| |||||||||| Sbjct: 16977432 tcacttgagacacgctcat 16977414 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 207 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 266 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 16977731 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 16977672 Query: 267 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 326 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 16977671 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 16977612 Query: 327 atctg 331 ||||| Sbjct: 16977611 atctg 16977607 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 496 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 555 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 16975284 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 16975225 Query: 556 ccttcttgtccgcggcg 572 |||||||| | |||||| Sbjct: 16975224 ccttcttggcggcggcg 16975208 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 407 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 466 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 16975770 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 16975711 Query: 467 agatgcagccttgttcgttccagcgttat 495 || || |||||||| ||||||||||||| Sbjct: 16975710 ggacgccgccttgtttgttccagcgttat 16975682
>dbj|AP004663.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E02 Length = 144294 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 333 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 392 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 13009 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 12950 Query: 393 tcgcttgaaacacgctcat 411 || ||||| |||||||||| Sbjct: 12949 tcacttgagacacgctcat 12931 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 207 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 266 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 13248 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 13189 Query: 267 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 326 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 13188 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 13129 Query: 327 atctg 331 ||||| Sbjct: 13128 atctg 13124 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 496 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 555 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 10801 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 10742 Query: 556 ccttcttgtccgcggcg 572 |||||||| | |||||| Sbjct: 10741 ccttcttggcggcggcg 10725 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 407 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 466 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 11287 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 11228 Query: 467 agatgcagccttgttcgttccagcgttat 495 || || |||||||| ||||||||||||| Sbjct: 11227 ggacgccgccttgtttgttccagcgttat 11199
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 333 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 392 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 124503 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 124444 Query: 393 tcgcttgaaacacgctcat 411 || ||||| |||||||||| Sbjct: 124443 tcacttgagacacgctcat 124425 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Minus Query: 496 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 555 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 122295 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 122236 Query: 556 ccttcttgtccgcggcg 572 |||||||| | |||||| Sbjct: 122235 ccttcttggcggcggcg 122219 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 269 gttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcat 328 ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 124680 gttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatcat 124621 Query: 329 ctg 331 ||| Sbjct: 124620 ctg 124618 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 407 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 466 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 122781 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 122722 Query: 467 agatgcagccttgttcgttccagcgttat 495 || || |||||||| ||||||||||||| Sbjct: 122721 ggacgccgccttgtttgttccagcgttat 122693
>gb|AY084597.1| Arabidopsis thaliana clone 112835 mRNA, complete sequence Length = 726 Score = 89.7 bits (45), Expect = 1e-14 Identities = 222/281 (79%) Strand = Plus / Minus Query: 210 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 269 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 270 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 329 |||||||| || || ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttccccgactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 330 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 389 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 390 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 449 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 450 ttgagggaagttccgctagatgcagccttgttcgttccagc 490 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete sequence Length = 110572 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 285 cccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgtgcc 344 ||||||||||||||||||||||| || ||||||||| |||| || ||||||||||||||| Sbjct: 37003 cccgactcgtactcctggatcacttgaggcttctcactgataatttgagcaagttgtgcc 36944 Query: 345 tgggtcatcttcttatccagccttgcttgcat 376 || || | |||||| |||| ||| | |||||| Sbjct: 36943 tgagtaagcttcttgtccatcctagtttgcat 36912
>ref|NM_115730.2| Arabidopsis thaliana DNA binding / transcription coactivator AT3G58680 mRNA, complete cds Length = 799 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 210 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 269 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 270 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 329 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 330 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 389 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 390 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 449 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 450 ttgagggaagttccgctagatgcagccttgttcgttccagc 490 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AF339728.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 479 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 210 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 269 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 428 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 369 Query: 270 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 329 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 368 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 309 Query: 330 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 389 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 308 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 249 Query: 390 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 449 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 248 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 189 Query: 450 ttgagggaagttccgctagatgcagccttgttcgttccagc 490 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 188 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 148
>gb|AF326909.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 741 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 210 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 269 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 270 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 329 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 330 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 389 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 390 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 449 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 450 ttgagggaagttccgctagatgcagccttgttcgttccagc 490 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AY081487.1| Arabidopsis thaliana transcriptional coactivator-like protein (At3g58680) mRNA, complete cds Length = 607 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 210 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 269 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 428 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 369 Query: 270 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 329 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 368 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 309 Query: 330 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 389 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 308 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 249 Query: 390 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 449 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 248 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 189 Query: 450 ttgagggaagttccgctagatgcagccttgttcgttccagc 490 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 188 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 148
>gb|AY042850.1| Arabidopsis thaliana transcriptional coactivator-like protein (T20N10_30) mRNA, complete cds Length = 724 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 210 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 269 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 270 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 329 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 330 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 389 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 390 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 449 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 450 ttgagggaagttccgctagatgcagccttgttcgttccagc 490 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AF324717.2|AF324717 Arabidopsis thaliana AT3g58680 (AT3g58680/T20N10_30) mRNA, complete cds Length = 779 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 210 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 269 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 573 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 514 Query: 270 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 329 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 513 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 454 Query: 330 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 389 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 453 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 394 Query: 390 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 449 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 393 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 334 Query: 450 ttgagggaagttccgctagatgcagccttgttcgttccagc 490 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 333 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 293
>dbj|AB072698.1| Nicotiana tabacum NtMBF1a mRNA for putative multiprotein bridging factor 1, complete cds Length = 703 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 273 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 332 ||||||||||| || ||||| ||||||||||| | || ||||||||||| |||| ||| Sbjct: 423 ggaatcgcctttccagactcatactcctggatgatttgaggcttctcatttatcaactgg 364 Query: 333 gcaagttgtgcctgggtcatcttcttatc 361 |||||||| |||||||||| ||||||||| Sbjct: 363 gcaagttgagcctgggtcagcttcttatc 335 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 505 tggtgtcgatctcggcgccggagcggcgggcagcgttgacggc 547 |||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 191 tggtttcgatctcagcaccggagcgacgggcggcgttgacggc 149
>emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20N10 Length = 90273 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 210 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 269 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 8479 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 8420 Query: 270 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatca 327 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 8419 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatca 8362 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 462 ccgctagatgcagccttgttcgttccagc 490 ||||| |||||||||||||||| |||||| Sbjct: 7831 ccgcttgatgcagccttgttcgatccagc 7803
>ref|NM_129829.2| Arabidopsis thaliana DNA binding / transcription coactivator AT2G42680 mRNA, complete cds Length = 692 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 282 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 341 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 425 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 366 Query: 342 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 401 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 365 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 306 Query: 402 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 461 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 305 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 246 Query: 462 ccgctagatgcagccttgttcgttccagc 490 ||||| ||||| |||||||| |||||||| Sbjct: 245 ccgcttgatgccgccttgttggttccagc 217
>gb|AY063014.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 460 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 282 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 341 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 356 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 297 Query: 342 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 401 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 296 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 237 Query: 402 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 461 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 236 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 177 Query: 462 ccgctagatgcagccttgttcgttccagc 490 ||||| ||||| |||||||| |||||||| Sbjct: 176 ccgcttgatgccgccttgttggttccagc 148
>gb|AF370280.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 703 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 282 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 341 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 420 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 361 Query: 342 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 401 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 360 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 301 Query: 402 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 461 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 300 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 241 Query: 462 ccgctagatgcagccttgttcgttccagc 490 ||||| ||||| |||||||| |||||||| Sbjct: 240 ccgcttgatgccgccttgttggttccagc 212
>emb|BX819434.1|CNS0A8ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 282 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 341 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 411 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 352 Query: 342 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 401 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 351 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 292 Query: 402 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 461 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 291 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgtttagagatgtg 232 Query: 462 ccgctagatgcagccttgttcgttccagc 490 ||||| ||||| |||||||| |||||||| Sbjct: 231 ccgcttgatgccgccttgttggttccagc 203
>gb|AY088140.1| Arabidopsis thaliana clone 41712 mRNA, complete sequence Length = 675 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 282 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 341 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 425 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 366 Query: 342 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 401 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 365 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 306 Query: 402 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 461 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 305 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 246 Query: 462 ccgctagatgcagccttgttcgttccagc 490 ||||| ||||| |||||||| |||||||| Sbjct: 245 ccgcttgatgccgccttgttggttccagc 217
>gb|AF232062.1|AF232062 Solanum tuberosum multiprotein bridging factor 1 mRNA, complete cds Length = 626 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 258 attatctgattgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttc 317 |||||||| | ||| ||||| ||||| ||||||||||| || ||||| | |||||||||| Sbjct: 394 attatctgttggtttggaattgcctttcccgactcgtattcttggataatctgtggcttc 335 Query: 318 tcattgatcatctgagcaagttgtgcctgggtcatcttctt 358 ||||| |||| ||||||||||| | ||| |||| |||||| Sbjct: 334 tcatttatcaattgagcaagttgagactgagtcagcttctt 294 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 510 tcgatctcggcgccggagcggcgggcagcgttgacggc 547 |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 142 tcgatctcggcgccggagcgacgggcggcgttaacggc 105
>emb|BX826065.1|CNS0A4ZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL82ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 671 Score = 61.9 bits (31), Expect = 2e-06 Identities = 98/119 (82%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 210 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 269 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 496 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 437 Query: 270 ttcggaatcgccttgccc-gactcgtactcctggatcacctgtggcttctcattgatca 327 |||||||| || || | | |||||||| || |||||||| ||||||||||||||||||| Sbjct: 436 ttcggaattgctttccacagactcgtattcttggatcacttgtggcttctcattgatca 378 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 462 ccgctagatgcagccttgttcgttccagc 490 ||||| |||||||||||||||| |||||| Sbjct: 242 ccgcttgatgcagccttgttcgatccagc 214
>emb|Z49698.1|RCJS21MR R.communis mRNA (unknown) Length = 674 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 294 tactcctggatcacctgtggcttctcattgatcatctgagcaagttgtgcctgggt 349 ||||| ||||| | ||| ||||| |||||||||||||||||||| || |||||||| Sbjct: 390 tactcttggattatctggggcttttcattgatcatctgagcaagctgagcctgggt 335 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 510 tcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttctt 562 ||||||||||| || | ||| || |||||||||||| |||| ||||||||||| Sbjct: 174 tcgatctcggcaccagcgcgacgagcagcgttgacgaccttctcgtccttctt 122
>gb|AC007087.7| Arabidopsis thaliana chromosome 2 clone F14N22 map mi551, complete sequence Length = 96685 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 282 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatct 330 ||||| ||||| ||||| || ||||| ||||||||||||||||| |||| Sbjct: 9784 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatct 9832
>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete sequence Length = 115310 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 282 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatct 330 ||||| ||||| ||||| || ||||| ||||||||||||||||| |||| Sbjct: 105703 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatct 105751
>gb|BC015500.1| Homo sapiens endothelial differentiation-related factor 1, transcript variant alpha, mRNA (cDNA clone MGC:9058 IMAGE:3903539), complete cds Length = 658 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>ref|NM_153200.1| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant beta, mRNA Length = 538 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>ref|NM_003792.2| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant alpha, mRNA Length = 658 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 141458 gatcacctgtggcttctcattgat 141481
>gb|BT009863.1| Homo sapiens endothelial differentiation-related factor 1 mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>emb|CR541914.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0633D for gene EDF1, endothelial differentiation-related factor 1; complete cds, without stopcodon Length = 444 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>emb|AJ005259.1|HSAJ5259 Homo sapiens mRNA for EDF-1 protein Length = 981 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 352 gatcacctgtggcttctcattgat 329
>gb|AY888864.1| Synthetic construct Homo sapiens clone FLH109977.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>gb|AY888863.1| Synthetic construct Homo sapiens clone FLH109976.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>gb|AY888862.1| Synthetic construct Homo sapiens clone FLH109972.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>dbj|AB002283.2| Homo sapiens mRNA for hMBF1beta, complete cds Length = 538 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 355 gatcacctgtggcttctcattgat 332
>gb|AY893963.1| Synthetic construct Homo sapiens clone FLH130861.01L endothelial differentiation-related factor 1 (EDF1) mRNA, partial cds Length = 447 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>dbj|AB002282.1| Homo sapiens mRNA for hMBF1alpha, complete cds Length = 636 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 302 gatcacctgtggcttctcattgat 325 |||||||||||||||||||||||| Sbjct: 355 gatcacctgtggcttctcattgat 332
>gb|AY509992.1| Malus x domestica cultivar Royal Gala sucrose phosphate phosphatase mRNA, complete cds Length = 1631 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 412 gggaaaggttctcagtgtcgt 432 ||||||||||||||||||||| Sbjct: 222 gggaaaggttctcagtgtcgt 202
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence Length = 210205 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 ttggtggtgtcgatctcggcg 521 ||||||||||||||||||||| Sbjct: 188873 ttggtggtgtcgatctcggcg 188853
>gb|AE008743.2| Salmonella typhimurium LT2, section 49 of 220 of the complete genome Length = 62027 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 500 cttggtggtgtcgatctcggcgccg 524 ||||||||||||| ||||||||||| Sbjct: 2350 cttggtggtgtcgctctcggcgccg 2374
>emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 4/20 Length = 294050 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 500 cttggtggtgtcgatctcggcgccg 524 ||||||||||||| ||||||||||| Sbjct: 238677 cttggtggtgtcgctctcggcgccg 238701
>emb|CR384085.5| Zebrafish DNA sequence from clone CH211-267K7 in linkage group 5, complete sequence Length = 140947 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tgacaaacaagctttagaata 87 ||||||||||||||||||||| Sbjct: 74547 tgacaaacaagctttagaata 74567
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 515 ctcggcgccggagcggcgggc 535 ||||||||||||||||||||| Sbjct: 874563 ctcggcgccggagcggcgggc 874543
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 500 cttggtggtgtcgatctcggcgccg 524 ||||||||||||| ||||||||||| Sbjct: 1865324 cttggtggtgtcgctctcggcgccg 1865300
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 500 cttggtggtgtcgatctcggcgccg 524 ||||||||||||| ||||||||||| Sbjct: 1983400 cttggtggtgtcgctctcggcgccg 1983376
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 500 cttggtggtgtcgatctcggcgccg 524 ||||||||||||| ||||||||||| Sbjct: 1072430 cttggtggtgtcgctctcggcgccg 1072454
>ref|XM_365829.1| Magnaporthe grisea 70-15 hypothetical protein (MG10049.4) partial mRNA Length = 654 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 ctcggcgccggagcggcggg 534 |||||||||||||||||||| Sbjct: 376 ctcggcgccggagcggcggg 395
>emb|Z32679.1|CEC05B5 Caenorhabditis elegans Cosmid C05B5, complete sequence Length = 30320 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 129 attcagtatcaaccaacaggaacagcct 156 ||||||||||| |||||| ||||||||| Sbjct: 16368 attcagtatcagccaacatgaacagcct 16395
>gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete sequence Length = 150332 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cttgcataaggtttttcttc 389 |||||||||||||||||||| Sbjct: 126454 cttgcataaggtttttcttc 126435
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 tggtggtgtcgatctcggcg 521 |||||||||||||||||||| Sbjct: 136957 tggtggtgtcgatctcggcg 136976
>gb|AC133540.2| Homo sapiens chromosome 16 clone LA16c-352F7, complete sequence Length = 40695 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cttgcataaggtttttcttc 389 |||||||||||||||||||| Sbjct: 2479 cttgcataaggtttttcttc 2498
>gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, complete sequence Length = 186963 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 agccgcttggtgttgaggga 457 |||||||||||||||||||| Sbjct: 44273 agccgcttggtgttgaggga 44292
>gb|DQ397548.1| Cenarchaeum symbiosum clone C04G08, complete sequence Length = 46706 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 gtatcaaccaacaggaacag 153 |||||||||||||||||||| Sbjct: 45414 gtatcaaccaacaggaacag 45395
>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence Length = 207283 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cttgcataaggtttttcttc 389 |||||||||||||||||||| Sbjct: 8402 cttgcataaggtttttcttc 8383
>ref|NM_001025972.1| Caenorhabditis elegans C05B5.9 (C05B5.9) mRNA, complete cds Length = 598 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 129 attcagtatcaaccaacaggaacagcct 156 ||||||||||| |||||| ||||||||| Sbjct: 242 attcagtatcagccaacatgaacagcct 269
>emb|AL929242.16| Mouse DNA sequence from clone RP23-78D16 on chromosome 2, complete sequence Length = 217352 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 catggttattcagtatcaac 141 |||||||||||||||||||| Sbjct: 135410 catggttattcagtatcaac 135391
>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4, cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ), MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY (mmcY) genes, complete cds; and unknown genes Length = 63734 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 tcggcgccggagcggcgggcagcg 539 |||||||||||| ||||||||||| Sbjct: 7251 tcggcgccggaggggcgggcagcg 7228
>gb|L05438.1|MUSIGFBP03 Mouse insulin-like growth factor binding protein 2 (IGFBP-2) gene, exon 3 Length = 425 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 agccgcttggtgttgaggga 457 |||||||||||||||||||| Sbjct: 121 agccgcttggtgttgaggga 140 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,150,925 Number of Sequences: 3902068 Number of extensions: 4150925 Number of successful extensions: 75647 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75303 Number of HSP's gapped (non-prelim): 336 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)