>gb|DQ213693.1| Taeniopygia guttata clone 0058P0047B03 RIKEN cDNA 2410129H14-like
           mRNA, complete sequence
          Length = 875

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 389 cgcggcgcgttccggttccgggc 411
           |||||||||||||||||||||||
Sbjct: 83  cgcggcgcgttccggttccgggc 105

>gb|DQ213692.1| Taeniopygia guttata clone 0058P0056A05 RIKEN cDNA 2410129H14-like
           mRNA, complete sequence
          Length = 809

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 389 cgcggcgcgttccggttccgggc 411
           |||||||||||||||||||||||
Sbjct: 17  cgcggcgcgttccggttccgggc 39

>emb|AL356512.19| Human DNA sequence from clone RP11-156E8 on chromosome 1 Contains the
             5' end of the gene for a novel protein (FLJ33608) and a
             CpG island, complete sequence
          Length = 74029

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   aacaatgacccacaaacttga 131
             |||||||||||||||||||||
Sbjct: 13075 aacaatgacccacaaacttga 13055

>gb|AC009878.9| Homo sapiens chromosome 15, clone RP11-345N11, complete sequence
          Length = 198372

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 272   gacaagacttcatgcttcatc 292
             |||||||||||||||||||||
Sbjct: 84588 gacaagacttcatgcttcatc 84608

>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome
          Length = 1176248

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 168    atagcttatagctatgattta 188
              |||||||||||||||||||||
Sbjct: 526194 atagcttatagctatgattta 526214

>gb|AC022603.5|AC022603 Homo sapiens chromosome 15, clone RP11-20B10, complete sequence
          Length = 153223

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 272   gacaagacttcatgcttcatc 292
             |||||||||||||||||||||
Sbjct: 44221 gacaagacttcatgcttcatc 44201

>gb|AC012442.7| Homo sapiens BAC clone RP11-1I24 from 2, complete sequence
          Length = 173040

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 184   atttattcttcctaaataata 204
             |||||||||||||||||||||
Sbjct: 72604 atttattcttcctaaataata 72624

>gb|AY277969.1| Takifugu rubripes transcription factor Sox18 (Sox18) gene, complete
            cds
          Length = 2300

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 249  gcagccttcctccatatcac 268
            ||||||||||||||||||||
Sbjct: 1083 gcagccttcctccatatcac 1102

>gb|AC183546.3| Pan troglodytes BAC clone CH251-245P24 from chromosome 2, complete
              sequence
          Length = 202850

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 321    caagtcttgctcttcatccccctt 344
              |||||||||||| |||||||||||
Sbjct: 193631 caagtcttgctcctcatccccctt 193608

>gb|AC119035.5| Homo sapiens 3 BAC RP11-445E17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170181

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    aggttcaaatgtagtggtag 63
             ||||||||||||||||||||
Sbjct: 73187 aggttcaaatgtagtggtag 73168

>emb|AL139006.13| Human DNA sequence from clone RP11-30E17 on chromosome 13q33.3-34
             Contains the 5' end of the C13orf10 gene for chromosome 13
             open reading frame 10, a novel gene and a CpG island,
             complete sequence
          Length = 37241

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   tttattcttcctaaataata 204
             ||||||||||||||||||||
Sbjct: 20047 tttattcttcctaaataata 20066

>emb|AL034351.1|HS879K22 Human DNA sequence from clone RP5-879K22 on chromosome 1q32.1-41
             Contains part of the gene for melanoma antigen recognized
             by T cells 2 protein (MART2), complete sequence
          Length = 137678

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 207   gatggtgctaaataggacagtctt 230
             |||||||||||||| |||||||||
Sbjct: 58531 gatggtgctaaataagacagtctt 58554

>gb|AC083903.10| Homo sapiens BAC clone RP11-785G23 from UL, complete sequence
          Length = 174480

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 321    caagtcttgctcttcatccccctt 344
              |||||||||||| |||||||||||
Sbjct: 164192 caagtcttgctcctcatccccctt 164215

>gb|AC117461.3| Homo sapiens 3 BAC RP11-346H19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 154870

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     aggttcaaatgtagtggtag 63
              ||||||||||||||||||||
Sbjct: 151751 aggttcaaatgtagtggtag 151770

>dbj|AK095828.1| Homo sapiens cDNA FLJ38509 fis, clone HCHON2000344, highly similar to
            Homo sapiens cyclin-D binding Myb-like protein mRNA
          Length = 2519

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 187  tattcttcctaaataataat 206
            ||||||||||||||||||||
Sbjct: 1769 tattcttcctaaataataat 1788

>emb|BX572621.7| Zebrafish DNA sequence from clone DKEY-34B22 in linkage group 5, complete
              sequence
          Length = 196336

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    aatgacccacaaacttgaca 133
              ||||||||||||||||||||
Sbjct: 175659 aatgacccacaaacttgaca 175640

>ref|XM_397138.2| PREDICTED: Apis mellifera similar to CDNA sequence BC021917
            (LOC413697), mRNA
          Length = 2191

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 187  tattcttcctaaataataat 206
            ||||||||||||||||||||
Sbjct: 1798 tattcttcctaaataataat 1817

>gb|AC145345.3| Mus musculus BAC clone RP23-343D3 from chromosome 7, complete sequence
          Length = 212264

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    tttggtgcagagaaataaag 92
             ||||||||||||||||||||
Sbjct: 97816 tttggtgcagagaaataaag 97797

>gb|AC012487.12| Homo sapiens BAC clone RP11-85M14 from 2, complete sequence
          Length = 156602

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 321    caagtcttgctcttcatccccctt 344
              |||||||||||| |||||||||||
Sbjct: 143976 caagtcttgctcctcatccccctt 143999

>dbj|AK026985.1| Homo sapiens cDNA: FLJ23332 fis, clone HEP12754
          Length = 2187

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  acaagacttcatgcttcatc 292
            ||||||||||||||||||||
Sbjct: 1939 acaagacttcatgcttcatc 1920

>gb|AC005076.2|AC005076 Homo sapiens BAC clone CTA-227L24 from 7q21.1-q21.2, complete sequence
          Length = 158146

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   tattcttcctaaataataat 206
             ||||||||||||||||||||
Sbjct: 37725 tattcttcctaaataataat 37744

>emb|AL135841.11| Human DNA sequence from clone RP11-327L3 on chromosome 9p13.1-13.3
             Contains two novel genes, a phosphoglycerate mutase 1
             (brain) (PGAMA) (PGAM1) psueodgene, the OR2S2 gene for
             olfactory receptor family 2 subfamily S member 2 and a
             nuclease sensitive element binding protein 1 (YB1, BP-8,
             CSDB, DBPB, YB-1, YBX1, NSEP-1, MDR-NF1) (NSEP1)
             pseudogene, complete sequence
          Length = 99886

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   aataataatgatggtgctaa 217
             ||||||||||||||||||||
Sbjct: 79223 aataataatgatggtgctaa 79204

>gb|AC134249.4| Mus musculus BAC clone RP23-359K17 from 12, complete sequence
          Length = 190423

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    gctgcagcaacaatgaccca 122
              ||||||||||||||||||||
Sbjct: 137051 gctgcagcaacaatgaccca 137070

>gb|AC147614.4| Mus musculus BAC clone RP23-399A18 from 7, complete sequence
          Length = 193777

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     tttggtgcagagaaataaag 92
              ||||||||||||||||||||
Sbjct: 176835 tttggtgcagagaaataaag 176854

>dbj|AB217317.1| Equus caballus DNA, microsatellite TKY3374
          Length = 540

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  atagcaggttcaaatgtagt 58
           ||||||||||||||||||||
Sbjct: 274 atagcaggttcaaatgtagt 293


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,573,134
Number of Sequences: 3902068
Number of extensions: 4573134
Number of successful extensions: 92469
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92418
Number of HSP's gapped (non-prelim): 51
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)