ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19n08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_468292.1| Oryza sativa (japonica cultivar-group), mRNA 192 8e-46
2dbj|AK073740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 8e-46
3gb|BT017208.1| Zea mays clone EL01N0372A05.c mRNA sequence 127 4e-26
4gb|AY105709.1| Zea mays PCO116780 mRNA sequence 119 1e-23
5gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare str... 101 2e-18
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
7dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
8dbj|AP004153.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
9dbj|AK063891.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
10gb|AC015722.6| Homo sapiens chromosome 15, clone RP11-167B3, com... 42 1.8
11gb|AC022523.7| Homo sapiens chromosome 15, clone RP11-183E24, co... 42 1.8
12ref|XM_507878.1| PREDICTED: Pan troglodytes similar to DC-TM4F2 ... 40 7.3
13gb|AC123948.4| Mus musculus BAC clone RP23-105C3 from chromosome... 40 7.3
14gb|BC030149.2| Homo sapiens cDNA clone IMAGE:4842353, partial cds 40 7.3
15gb|AC021028.12| Homo sapiens chromosome 10 clone RP11-137H2, com... 40 7.3
16gb|BC047432.1| Homo sapiens cDNA clone IMAGE:5288883 40 7.3
17gb|BC093016.1| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC... 40 7.3
18gb|AF311903.1| Homo sapiens DC-TM4F2 precursor, mRNA, complete cds 40 7.3
19emb|AL136638.1|HSM801611 Homo sapiens mRNA; cDNA DKFZp564B1037 (... 40 7.3
20emb|CR620309.1| full-length cDNA clone CS0DL011YM05 of B cells (... 40 7.3
21dbj|AK055641.1| Homo sapiens cDNA FLJ31079 fis, clone HSYRA2001595 40 7.3
22ref|NM_030927.1| Homo sapiens tetraspanin 14 (TSPAN14), mRNA 40 7.3
23gb|BC002920.2| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC... 40 7.3
24gb|AC078778.34| Homo sapiens 12 BAC RP11-968A15 (Roswell Park Ca... 40 7.3
25dbj|AP006138.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 7.3
26emb|AL669901.26| Mouse DNA sequence from clone RP23-35N5 on chro... 40 7.3

>ref|XM_468292.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1238

 Score =  192 bits (97), Expect = 8e-46
 Identities = 187/217 (86%)
 Strand = Plus / Minus

                                                                       
Query: 323 gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 382
           ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 963 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 904

                                                                       
Query: 383 cttcgctttccacacagtacctctagtagatgtgtctgacttctgatatactggggaccg 442
           |||||||||||||||||||||||||| ||| |||||||| ||||||||   ||||   ||
Sbjct: 903 cttcgctttccacacagtacctctagcagacgtgtctgatttctgatactgtgggtgacg 844

                                                                       
Query: 443 atgtgtgcctatccatgcttttagacccgtcaaaaatggtgcaaccatataaagcttcat 502
           ||||||| ||||||| ||||||||||||  |||||||||||| |||||||| ||||||||
Sbjct: 843 atgtgtggctatccaggcttttagaccctgcaaaaatggtgcgaccatatagagcttcat 784

                                                
Query: 503 cccattcactccacgagatattgcatcatcactagca 539
           |||||||||||||||||||||||| ||||||| ||||
Sbjct: 783 cccattcactccacgagatattgcgtcatcaccagca 747



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                        
Query: 175  tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 234
            ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 1075 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 1016

                                     
Query: 235  cgaatctgaagcttctgaagctttt 259
            |||| |||||| ||| |||||||||
Sbjct: 1015 cgaacctgaagtttcggaagctttt 991



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>dbj|AK073740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K03, full
           insert sequence
          Length = 1238

 Score =  192 bits (97), Expect = 8e-46
 Identities = 187/217 (86%)
 Strand = Plus / Minus

                                                                       
Query: 323 gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 382
           ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 963 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 904

                                                                       
Query: 383 cttcgctttccacacagtacctctagtagatgtgtctgacttctgatatactggggaccg 442
           |||||||||||||||||||||||||| ||| |||||||| ||||||||   ||||   ||
Sbjct: 903 cttcgctttccacacagtacctctagcagacgtgtctgatttctgatactgtgggtgacg 844

                                                                       
Query: 443 atgtgtgcctatccatgcttttagacccgtcaaaaatggtgcaaccatataaagcttcat 502
           ||||||| ||||||| ||||||||||||  |||||||||||| |||||||| ||||||||
Sbjct: 843 atgtgtggctatccaggcttttagaccctgcaaaaatggtgcgaccatatagagcttcat 784

                                                
Query: 503 cccattcactccacgagatattgcatcatcactagca 539
           |||||||||||||||||||||||| ||||||| ||||
Sbjct: 783 cccattcactccacgagatattgcgtcatcaccagca 747



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                        
Query: 175  tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 234
            ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 1075 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 1016

                                     
Query: 235  cgaatctgaagcttctgaagctttt 259
            |||| |||||| ||| |||||||||
Sbjct: 1015 cgaacctgaagtttcggaagctttt 991



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>gb|BT017208.1| Zea mays clone EL01N0372A05.c mRNA sequence
          Length = 887

 Score =  127 bits (64), Expect = 4e-26
 Identities = 127/148 (85%)
 Strand = Plus / Minus

                                                                       
Query: 391 tccacacagtacctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgc 450
           |||||||||||||||||| |||||| ||||  |||||||  | ||| |   |||||||| 
Sbjct: 240 tccacacagtacctctagcagatgtctctggtttctgatgcagtggtggaggatgtgtgg 181

                                                                       
Query: 451 ctatccatgcttttagacccgtcaaaaatggtgcaaccatataaagcttcatcccattca 510
           | ||||| || || |||||||||||||||||||||||||| || |||||||| |||||||
Sbjct: 180 caatccaagccttaagacccgtcaaaaatggtgcaaccatgtacagcttcattccattca 121

                                       
Query: 511 ctccacgagatattgcatcatcactagc 538
           || ||||||||| |||||||||||||||
Sbjct: 120 ctgcacgagatactgcatcatcactagc 93



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                       
Query: 140 gtctatacacatcaagggtacaggagttgatgatctgtcaggatcctaggtacgcagaaa 199
           ||||||||||||||||||| |||| || |||| |  ||||||||||||||| || || ||
Sbjct: 452 gtctatacacatcaagggtgcaggtgtggatgcttcgtcaggatcctaggtgcgtaggaa 393

                                                                    
Query: 200 ggaagcatcaatggactgcagaatactggccgtatcgaatctgaagcttctgaagct 256
           |||||| || |||| |||||| || || || || || || |||||| ||||||||||
Sbjct: 392 ggaagcctccatggcctgcaggatgcttgcggtgtcaaacctgaagtttctgaagct 336



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>gb|AY105709.1| Zea mays PCO116780 mRNA sequence
          Length = 1656

 Score =  119 bits (60), Expect = 1e-23
 Identities = 126/148 (85%)
 Strand = Plus / Minus

                                                                        
Query: 391  tccacacagtacctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgc 450
            |||||||||||||||||| |||||| ||||  |||||||  | ||| |   |||||||| 
Sbjct: 1083 tccacacagtacctctagcagatgtctctggtttctgatgcagtggtggaggatgtgtgg 1024

                                                                        
Query: 451  ctatccatgcttttagacccgtcaaaaatggtgcaaccatataaagcttcatcccattca 510
            | ||||| || || ||||||||||||||||| |||||||| || |||||||| |||||||
Sbjct: 1023 caatccaagccttaagacccgtcaaaaatggcgcaaccatgtacagcttcattccattca 964

                                        
Query: 511  ctccacgagatattgcatcatcactagc 538
            || ||||||||| |||||||||||||||
Sbjct: 963  ctgcacgagatactgcatcatcactagc 936



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 97/117 (82%)
 Strand = Plus / Minus

                                                                        
Query: 140  gtctatacacatcaagggtacaggagttgatgatctgtcaggatcctaggtacgcagaaa 199
            ||||||||||||||||||| |||| ||||||| |  |||||||| |||||| || || ||
Sbjct: 1295 gtctatacacatcaagggtgcaggtgttgatgcttcgtcaggattctaggtgcgtaggaa 1236

                                                                     
Query: 200  ggaagcatcaatggactgcagaatactggccgtatcgaatctgaagcttctgaagct 256
            |||||| || |||| |||||| || || || || || || |||||| ||||||||||
Sbjct: 1235 ggaagcctccatggcctgcaggatgcttgcggtgtcaaacctgaagtttctgaagct 1179



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>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0049O12, from chromosome 2, complete sequence
          Length = 155154

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                          
Query: 473    caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 532
              |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 106935 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 106876

                     
Query: 533    actagca 539
              || ||||
Sbjct: 106875 accagca 106869



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                          
Query: 175    tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 234
              ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 107736 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 107677

                                       
Query: 235    cgaatctgaagcttctgaagctttt 259
              |||| |||||| ||| |||||||||
Sbjct: 107676 cgaacctgaagtttcggaagctttt 107652



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                          
Query: 323    gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 382
              ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 107624 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 107565

                                    
Query: 383    cttcgctttccacacagtacct 404
              ||||||||||||||||||||||
Sbjct: 107564 cttcgctttccacacagtacct 107543



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                          
Query: 401    acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 460
              |||||||| ||| |||||||| ||||||||   ||||   ||||||||| ||||||| ||
Sbjct: 107173 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 107114

                        
Query: 461    ttttagaccc 470
              ||||||||||
Sbjct: 107113 ttttagaccc 107104



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                            
Query: 473      caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 532
                |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 34398171 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 34398230

                       
Query: 533      actagca 539
                || ||||
Sbjct: 34398231 accagca 34398237



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                            
Query: 175      tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 234
                ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 34397370 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 34397429

                                         
Query: 235      cgaatctgaagcttctgaagctttt 259
                |||| |||||| ||| |||||||||
Sbjct: 34397430 cgaacctgaagtttcggaagctttt 34397454



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                            
Query: 323      gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 382
                ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 34397482 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 34397541

                                      
Query: 383      cttcgctttccacacagtacct 404
                ||||||||||||||||||||||
Sbjct: 34397542 cttcgctttccacacagtacct 34397563



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                            
Query: 401      acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 460
                |||||||| ||| |||||||| ||||||||   ||||   ||||||||| ||||||| ||
Sbjct: 34397933 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 34397992

                          
Query: 461      ttttagaccc 470
                ||||||||||
Sbjct: 34397993 ttttagaccc 34398002



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>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1548_F12
          Length = 118814

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                         
Query: 473   caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 532
             |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 95818 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 95877

                    
Query: 533   actagca 539
             || ||||
Sbjct: 95878 accagca 95884



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                         
Query: 175   tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 234
             ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 95017 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 95076

                                      
Query: 235   cgaatctgaagcttctgaagctttt 259
             |||| |||||| ||| |||||||||
Sbjct: 95077 cgaacctgaagtttcggaagctttt 95101



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                         
Query: 323   gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 382
             ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 95129 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 95188

                                   
Query: 383   cttcgctttccacacagtacct 404
             ||||||||||||||||||||||
Sbjct: 95189 cttcgctttccacacagtacct 95210



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                         
Query: 401   acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 460
             |||||||| ||| |||||||| ||||||||   ||||   ||||||||| ||||||| ||
Sbjct: 95580 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 95639

                       
Query: 461   ttttagaccc 470
             ||||||||||
Sbjct: 95640 ttttagaccc 95649



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>dbj|AP004153.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1111_C07
          Length = 115190

 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                         
Query: 473   caaaaatggtgcaaccatataaagcttcatcccattcactccacgagatattgcatcatc 532
             |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 14413 caaaaatggtgcgaccatatagagcttcatcccattcactccacgagatattgcgtcatc 14472

                    
Query: 533   actagca 539
             || ||||
Sbjct: 14473 accagca 14479



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                         
Query: 175   tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 234
             ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 13612 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 13671

                                      
Query: 235   cgaatctgaagcttctgaagctttt 259
             |||| |||||| ||| |||||||||
Sbjct: 13672 cgaacctgaagtttcggaagctttt 13696



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                         
Query: 323   gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 382
             ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 13724 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 13783

                                   
Query: 383   cttcgctttccacacagtacct 404
             ||||||||||||||||||||||
Sbjct: 13784 cttcgctttccacacagtacct 13805



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                         
Query: 401   acctctagtagatgtgtctgacttctgatatactggggaccgatgtgtgcctatccatgc 460
             |||||||| ||| |||||||| ||||||||   ||||   ||||||||| ||||||| ||
Sbjct: 14175 acctctagcagacgtgtctgatttctgatactgtgggtgacgatgtgtggctatccaggc 14234

                       
Query: 461   ttttagaccc 470
             ||||||||||
Sbjct: 14235 ttttagaccc 14244



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>dbj|AK063891.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-G06, full
           insert sequence
          Length = 394

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 92/108 (85%)
 Strand = Plus / Minus

                                                                       
Query: 323 gtcagatcctgctctagtaataacagggttctcgacaggcacaaagacacccgagggatt 382
           ||||||||||| |||||||||||| |||||||| |||||| |     ||   |||| |||
Sbjct: 117 gtcagatcctgttctagtaataacggggttctcaacaggcgccgctccagttgaggaatt 58

                                                           
Query: 383 cttcgctttccacacagtacctctagtagatgtgtctgacttctgata 430
           |||||||||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 57  cttcgctttccacacagtacctctagcagacgtgtctgatttctgata 10



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                       
Query: 175 tgtcaggatcctaggtacgcagaaaggaagcatcaatggactgcagaatactggccgtat 234
           ||||||| ||||||||||| || |||||||| || ||||||||||| ||||| || || |
Sbjct: 229 tgtcaggctcctaggtacgtaggaaggaagcttccatggactgcaggatactcgctgtgt 170

                                    
Query: 235 cgaatctgaagcttctgaagctttt 259
           |||| |||||| ||| |||||||||
Sbjct: 169 cgaacctgaagtttcggaagctttt 145



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>gb|AC015722.6| Homo sapiens chromosome 15, clone RP11-167B3, complete sequence
          Length = 164964

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 20     agaaagatatgataacagtag 40
              |||||||||||||||||||||
Sbjct: 154333 agaaagatatgataacagtag 154313



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>gb|AC022523.7| Homo sapiens chromosome 15, clone RP11-183E24, complete sequence
          Length = 154471

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 20   agaaagatatgataacagtag 40
            |||||||||||||||||||||
Sbjct: 1469 agaaagatatgataacagtag 1449



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>ref|XM_507878.1| PREDICTED: Pan troglodytes similar to DC-TM4F2 precursor
           (LOC450559), mRNA
          Length = 1139

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 279 tgctgcgtgccagatcctgc 298
           ||||||||||||||||||||
Sbjct: 882 tgctgcgtgccagatcctgc 901



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>gb|AC123948.4| Mus musculus BAC clone RP23-105C3 from chromosome 10, complete sequence
          Length = 214819

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ataacaactcaagaaagata 28
             ||||||||||||||||||||
Sbjct: 92337 ataacaactcaagaaagata 92318



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>gb|BC030149.2| Homo sapiens cDNA clone IMAGE:4842353, partial cds
          Length = 1339

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 492 taaagcttcatcccattcac 511
           ||||||||||||||||||||
Sbjct: 430 taaagcttcatcccattcac 449



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>gb|AC021028.12| Homo sapiens chromosome 10 clone RP11-137H2, complete sequence
          Length = 161803

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    tgctgcgtgccagatcctgc 298
              ||||||||||||||||||||
Sbjct: 105260 tgctgcgtgccagatcctgc 105279



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>gb|BC047432.1| Homo sapiens cDNA clone IMAGE:5288883
          Length = 2155

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  taaagcttcatcccattcac 511
            ||||||||||||||||||||
Sbjct: 1316 taaagcttcatcccattcac 1335



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>gb|BC093016.1| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC:110883
           IMAGE:30528940), complete cds
          Length = 1964

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 279 tgctgcgtgccagatcctgc 298
           ||||||||||||||||||||
Sbjct: 663 tgctgcgtgccagatcctgc 682



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>gb|AF311903.1| Homo sapiens DC-TM4F2 precursor, mRNA, complete cds
          Length = 2553

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 279 tgctgcgtgccagatcctgc 298
           ||||||||||||||||||||
Sbjct: 628 tgctgcgtgccagatcctgc 647



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>emb|AL136638.1|HSM801611 Homo sapiens mRNA; cDNA DKFZp564B1037 (from clone DKFZp564B1037)
          Length = 2556

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 279 tgctgcgtgccagatcctgc 298
           ||||||||||||||||||||
Sbjct: 634 tgctgcgtgccagatcctgc 653



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>emb|CR620309.1| full-length cDNA clone CS0DL011YM05 of B cells (Ramos cell line)
           Cot 25-normalized of Homo sapiens (human)
          Length = 1525

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 492 taaagcttcatcccattcac 511
           ||||||||||||||||||||
Sbjct: 960 taaagcttcatcccattcac 979



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>dbj|AK055641.1| Homo sapiens cDNA FLJ31079 fis, clone HSYRA2001595
          Length = 2188

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  taaagcttcatcccattcac 511
            ||||||||||||||||||||
Sbjct: 1365 taaagcttcatcccattcac 1384



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>ref|NM_030927.1| Homo sapiens tetraspanin 14 (TSPAN14), mRNA
          Length = 2556

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 279 tgctgcgtgccagatcctgc 298
           ||||||||||||||||||||
Sbjct: 634 tgctgcgtgccagatcctgc 653



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>gb|BC002920.2| Homo sapiens tetraspanin 14, mRNA (cDNA clone MGC:11352
           IMAGE:3954042), complete cds
          Length = 2493

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 279 tgctgcgtgccagatcctgc 298
           ||||||||||||||||||||
Sbjct: 558 tgctgcgtgccagatcctgc 577



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>gb|AC078778.34| Homo sapiens 12 BAC RP11-968A15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 141003

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    taaagcttcatcccattcac 511
              ||||||||||||||||||||
Sbjct: 138055 taaagcttcatcccattcac 138074



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>dbj|AP006138.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT37A17, TM0240,
              complete sequence
          Length = 121317

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    agcttctgaagcttttgcca 263
              ||||||||||||||||||||
Sbjct: 118760 agcttctgaagcttttgcca 118779



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    agcttctgaagcttttgcca 263
              ||||||||||||||||||||
Sbjct: 107909 agcttctgaagcttttgcca 107928



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>emb|AL669901.26| Mouse DNA sequence from clone RP23-35N5 on chromosome X, complete
             sequence
          Length = 226126

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     acatttataacaactcaaga 22
             ||||||||||||||||||||
Sbjct: 70172 acatttataacaactcaaga 70191


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,649,852
Number of Sequences: 3902068
Number of extensions: 3649852
Number of successful extensions: 67442
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67348
Number of HSP's gapped (non-prelim): 92
length of query: 539
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 516
effective length of database: 17,143,297,704
effective search space: 8845941615264
effective search space used: 8845941615264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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