Clone Name | rbasd19m24 |
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Clone Library Name | barley_pub |
>BTF3_HUMAN (P20290) Transcription factor BTF3 (RNA polymerase B transcription| factor 3) Length = 206 Score = 132 bits (332), Expect = 1e-30 Identities = 66/119 (55%), Positives = 90/119 (75%), Gaps = 1/119 (0%) Frame = -3 Query: 685 HKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFQNPKVQASIAANTWVVSGT 509 H+T T DDK+LQ +LK++GVN I GIEEVN+F + VI F NPKVQAS+AANT+ ++G Sbjct: 78 HRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH 137 Query: 508 PQTKKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQMPGAEGGASIGAAQDDDDDVPELV 332 +TK+L ++LP+I+NQLG D+L +LRRLAE KQ +G A + +DDDD+VP+LV Sbjct: 138 AETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQ--SVDGKAPLATGEDDDDEVPDLV 194
>BTF3_MOUSE (Q64152) Transcription factor BTF3 (RNA polymerase B transcription| factor 3) Length = 204 Score = 132 bits (332), Expect = 1e-30 Identities = 66/119 (55%), Positives = 90/119 (75%), Gaps = 1/119 (0%) Frame = -3 Query: 685 HKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFQNPKVQASIAANTWVVSGT 509 H+T T DDK+LQ +LK++GVN I GIEEVN+F + VI F NPKVQAS+AANT+ ++G Sbjct: 76 HRTATADDKKLQFSLKKLGVNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGH 135 Query: 508 PQTKKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQMPGAEGGASIGAAQDDDDDVPELV 332 +TK+L ++LP+I+NQLG D+L +LRRLAE KQ +G A + +DDDD+VP+LV Sbjct: 136 AETKQLTEMLPSILNQLGADSLTSLRRLAEALPKQ--SVDGKAPLATGEDDDDEVPDLV 192
>BT3L4_MOUSE (Q9CQH7) Transcription factor BTF3 homolog 4 (Basic transcription| factor 3-like 4) Length = 158 Score = 121 bits (303), Expect = 2e-27 Identities = 61/119 (51%), Positives = 88/119 (73%), Gaps = 1/119 (0%) Frame = -3 Query: 685 HKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFQNPKVQASIAANTWVVSGT 509 H+T T DDK+LQS+LK++ VN I GIEEVN+ KDD VI F NPKVQAS++ANT+ ++G Sbjct: 29 HRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGH 88 Query: 508 PQTKKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQMPGAEGGASIGAAQDDDDDVPELV 332 + K + ++LP I++QLG D+L +LR+LAEQF +Q+ ++ ++DDDVP+LV Sbjct: 89 AEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSK-APKPEDIDEEDDDVPDLV 146
>BT3L4_HUMAN (Q96K17) Transcription factor BTF3 homolog 4 (Basic transcription| factor 3-like 4) Length = 158 Score = 121 bits (303), Expect = 2e-27 Identities = 61/119 (51%), Positives = 88/119 (73%), Gaps = 1/119 (0%) Frame = -3 Query: 685 HKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFQNPKVQASIAANTWVVSGT 509 H+T T DDK+LQS+LK++ VN I GIEEVN+ KDD VI F NPKVQAS++ANT+ ++G Sbjct: 29 HRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGH 88 Query: 508 PQTKKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQMPGAEGGASIGAAQDDDDDVPELV 332 + K + ++LP I++QLG D+L +LR+LAEQF +Q+ ++ ++DDDVP+LV Sbjct: 89 AEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSK-APKPEDIDEEDDDVPDLV 146
>BTF3_CAEEL (Q18885) Transcription factor BTF3 homolog (Inhibitor of cell death| 1) Length = 161 Score = 117 bits (293), Expect = 3e-26 Identities = 60/119 (50%), Positives = 81/119 (68%), Gaps = 1/119 (0%) Frame = -3 Query: 685 HKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFQNPKVQASIAANTWVVSGT 509 HKT DDK+LQS LK++ V IPGIEEVN+ KDD VI F NPKVQ S+ ANT+ V+G+ Sbjct: 36 HKTAAADDKKLQSNLKKLSVTNIPGIEEVNMIKDDGTVIHFNNPKVQTSVPANTFSVTGS 95 Query: 508 PQTKKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQMPGAEGGASIGAAQDDDDDVPELV 332 K++ ++LP I+NQLGP++L +L++LA K P +G +D+DVPELV Sbjct: 96 ADNKQITEMLPGILNQLGPESLTHLKKLANNVTKLGPDGKG---------EDEDVPELV 145
>BT3L3_HUMAN (Q13892) Transcription factor BTF3 homolog 3 (Basic transcription| factor 3-like 3) Length = 214 Score = 114 bits (286), Expect = 2e-25 Identities = 58/118 (49%), Positives = 83/118 (70%), Gaps = 1/118 (0%) Frame = -3 Query: 685 HKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFQNPKVQASIAANTWVVSGT 509 H+T T DDK+LQ +LK++ VN I GIE+VN+F + VI F NPK QAS+A NT+ ++G Sbjct: 64 HRTATADDKKLQFSLKKLQVNNISGIEKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGH 123 Query: 508 PQTKKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQMPGAEGGASIGAAQDDDDDVPEL 335 + K++ ++LP++++QLG D+L +LRRLAE KQ +G A + DDDD VPEL Sbjct: 124 AEAKQVTEMLPSVLSQLGADSLTSLRRLAEVLPKQ--PVDGKAPLATGGDDDDGVPEL 179
>BTF3_SCHPO (Q92371) Transcription factor BTF3 homolog| Length = 151 Score = 86.7 bits (213), Expect = 6e-17 Identities = 47/116 (40%), Positives = 74/116 (63%), Gaps = 1/116 (0%) Frame = -3 Query: 676 TTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDV-VIQFQNPKVQASIAANTWVVSGTPQT 500 + DDK++Q LK++ + + GI+EVN+FK+D VI F+ P V +S+ T + G + Sbjct: 34 SAADDKKVQGALKKLNMQNLAGIQEVNMFKEDGGVINFRAPTVHSSLPNETTAIYGKAEE 93 Query: 499 KKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQMPGAEGGASIGAAQDDDDDVPELV 332 K L ++LP I+N LGP++L LR++AEQ ++ E GA AQ DD ++P+LV Sbjct: 94 KTLSEILPGILNNLGPESLTALRQMAEQL--KVSEGEKGAD---AQADDGEIPDLV 144
>EGD1_YEAST (Q02642) BTF3 homolog EGD1 (GAL4 DNA-binding enhancer protein 1)| Length = 157 Score = 85.1 bits (209), Expect = 2e-16 Identities = 51/118 (43%), Positives = 66/118 (55%), Gaps = 1/118 (0%) Frame = -3 Query: 667 DDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFQNPKVQASIAANTWVVSGTPQTKKL 491 DD +LQS L ++ TI + E N FKDD V+ F VQ + NT V G PQ K L Sbjct: 40 DDTKLQSQLAKLHAVTIDNVAEANFFKDDGKVMHFNKVGVQVAAQHNTSVFYGLPQEKNL 99 Query: 490 QDLLPTIINQLGPDNLDNLRRLAEQFQKQMPGAEGGASIGAAQDDDDDVPELVPGETF 317 QDL P II+QLGP+ + L +LA Q +K A A+ D+ +PELV G+TF Sbjct: 100 QDLFPGIISQLGPEAIQALSQLAAQMEKHEAKAPAD-----AEKKDEAIPELVEGQTF 152
>BT3L1_HUMAN (Q13890) Transcription factor BTF3 homolog 1 (Basic transcription| factor 3-like 1) Length = 111 Score = 77.4 bits (189), Expect = 4e-14 Identities = 38/70 (54%), Positives = 54/70 (77%), Gaps = 1/70 (1%) Frame = -3 Query: 676 TTTDDKRLQSTLKRVGVNTIPGIEEVNIF-KDDVVIQFQNPKVQASIAANTWVVSGTPQT 500 TT +DK+ Q +LK++GVN IPGIEEVN+F VI F NP+VQAS+AANT+ ++G +T Sbjct: 33 TTAEDKKFQFSLKKLGVNNIPGIEEVNMFTHQGTVIHFNNPEVQASLAANTFTMTGHAET 92 Query: 499 KKLQDLLPTI 470 K+L ++L +I Sbjct: 93 KQLTEMLLSI 102
>BTT1_YEAST (P40314) BTF3 homolog BTT1| Length = 149 Score = 48.9 bits (115), Expect = 1e-05 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = -3 Query: 667 DDKRLQSTLKRVGVNTIPGIEEVNIFKDD-VVIQFQNPKVQASIAANTWVVSGTPQTKKL 491 D+ +LQ+ L ++ TI + E N FK + V+ F + VQ + N ++ G P+ L Sbjct: 40 DNTKLQAELHKLHPMTIENVAEANFFKKNGKVLHFNSAVVQIAPQCNLTMIHGQPKENTL 99 Query: 490 QDLLPTIINQLGPDNLDNLRRLAEQFQKQ 404 L P++ +QLG L+ L LA + + Sbjct: 100 NGLYPSVASQLGSQELEYLTGLAHNLENE 128
>NACA_YEAST (P38879) Nascent polypeptide-associated complex alpha subunit EGD2| (NAC-alpha) (Alpha-NAC) (GAL4 DNA-binding enhancer protein 2) Length = 173 Score = 40.4 bits (93), Expect = 0.005 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 6/113 (5%) Frame = -3 Query: 667 DDKRLQSTLKRVGVNTIPGIEEVNIFK-DDVVIQFQNPKVQASIAANTWVVSGTPQTKKL 491 ++K+ + + ++G+ IPGI V K D+ + + P+V S N +VV G + Sbjct: 15 NEKKARELIGKLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRSAGGN-YVVFGEAKVDNF 73 Query: 490 QDLLPTIINQ-----LGPDNLDNLRRLAEQFQKQMPGAEGGASIGAAQDDDDD 347 L Q + P N D + E Q M A G+ AA++DD++ Sbjct: 74 TQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEE 126
>BT3L2_HUMAN (Q13891) Transcription factor BTF3 homolog 2 (Basic transcription| factor 3-like 2) Length = 67 Score = 33.9 bits (76), Expect = 0.48 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = -3 Query: 685 HKTTTTDDKRLQSTLKRVGVNTIPGIEEVNIFKDDVVI 572 H+T T +DK+ Q +LK++ I GIEEVN+F + + Sbjct: 31 HRTATANDKKRQFSLKKL---EISGIEEVNMFTNQATV 65
>YOCA_CAEEL (Q23280) Hypothetical protein ZC395.10 in chromosome III| Length = 175 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Frame = -3 Query: 418 QFQKQMPGAEGGASIGAAQDD--DDDVPELVPGE 323 Q+ QM GA GGA G +DD DDD+P+L E Sbjct: 133 QYMSQMGGA-GGADFGGLEDDEEDDDMPDLEDNE 165
>MURG_SHEON (Q8CX35) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 362 Score = 31.6 bits (70), Expect = 2.4 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 12/93 (12%) Frame = -3 Query: 598 NIFKDDVVIQFQNPKVQASIAANTWVVSGTPQTKKLQDLLP------------TIINQLG 455 N + +++ PK A A VV G+ K DL+P T+ +Q+G Sbjct: 162 NPIRRELIALGGEPKQTADEALKVLVVGGSLGAKVFNDLMPEVVAALSKQQSITVWHQVG 221 Query: 454 PDNLDNLRRLAEQFQKQMPGAEGGASIGAAQDD 356 DNL ++ +Q G +GG ++ DD Sbjct: 222 KDNLAGVKSAYQQ-----QGQDGGVNVAEFIDD 249
>KAD2_ANASP (Q8Z0M3) Probable adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP| transphosphorylase 2) Length = 184 Score = 30.8 bits (68), Expect = 4.1 Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Frame = -3 Query: 649 STLKRVGVNTIPGIEEVNIFKDDVVIQFQNPKVQASIAANTWVVSGTPQTKKLQDLLPTI 470 S L +G + P + + + D+++I+ +++ S + WV+ G P+T + L + Sbjct: 40 SHLSELGRHAQPYMIKGELVPDEMIIELIRLRLKKSDVIDGWVLEGYPRTAFQAEELDFL 99 Query: 469 INQLGPDNLDNLRRLAEQFQKQMPGA-EGGASIGAAQDDDDDVPELV 332 +++LG ++L Q+P A S+G + DD PE+V Sbjct: 100 LDELG-------QKLDWAIYLQVPEAVMVSRSLGRSLPDDQ--PEIV 137
>KAD2_SYNY3 (P72641) Probable adenylate kinase 2 (EC 2.7.4.3) (ATP-AMP| transphosphorylase 2) Length = 181 Score = 30.4 bits (67), Expect = 5.3 Identities = 13/60 (21%), Positives = 29/60 (48%) Frame = -3 Query: 634 VGVNTIPGIEEVNIFKDDVVIQFQNPKVQASIAANTWVVSGTPQTKKLQDLLPTIINQLG 455 +G+ P +E ++ D ++I+F ++ W++ G P+T + L ++ LG Sbjct: 45 LGIKAKPYVERGDLLPDPMMIEFIQQRLVQEDGGQGWILEGYPRTAFQAEELDFLLEDLG 104
>UBQL1_RAT (Q9JJP9) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) Length = 582 Score = 29.6 bits (65), Expect = 9.0 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 19/100 (19%) Frame = -3 Query: 565 QNPKVQASIAANTWVVSGTPQ-TKKLQDLLPTIINQL-GPDNL----------------D 440 QNP + A + N + +G PQ ++++ LPT + Q+ PD L Sbjct: 403 QNPDLAAQMMLNNPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQ 462 Query: 439 NLRRLAEQFQKQMPGAEGGASIG-AAQDDDDDVPELVPGE 323 L+ LA + +PG G + G + P PGE Sbjct: 463 GLQTLATEAPGLIPGFTPGLAAGNSGGPAGTTAPSTAPGE 502
>HSP7M_PHAVU (Q01899) Heat shock 70 kDa protein, mitochondrial precursor| Length = 675 Score = 29.6 bits (65), Expect = 9.0 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 8/62 (12%) Frame = -3 Query: 499 KKLQDLLPTIINQLGPDNLDNLRRLAEQFQKQMP--------GAEGGASIGAAQDDDDDV 344 K+++D + + + DN+D ++ + K + G+ GG+S G +Q D Sbjct: 606 KEIEDAVSDLRKAMSGDNVDEIKSKLDAANKAVSKIGEHMSGGSSGGSSAGGSQGGGDQA 665 Query: 343 PE 338 PE Sbjct: 666 PE 667 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,832,216 Number of Sequences: 219361 Number of extensions: 1687274 Number of successful extensions: 5329 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 5113 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5311 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)